Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11530 Brassica napus
A02p26650 Brassica napus
A07p09460 Brassica napus
A08p14480 Brassica napus
A09p28730 Brassica napus
A09p34950 Brassica napus
Aa31LG2G14590 Aethionema arabicum
Aa31LG6G2190 Aethionema arabicum
Aa31LG6G7810 Aethionema arabicum
Aa31LG9G11650 Aethionema arabicum
Aa31LG9G15980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4937 Anthoceros agrestis
Actinidia04355 Actinidia chinensis
Actinidia04413 Actinidia chinensis
Actinidia34516 Actinidia chinensis
Ah.00g001240 Amaranthus hybridus
Ah.04g160660 Amaranthus hybridus
Ah.09g232270 Amaranthus hybridus
Ah.14g079540 Amaranthus hybridus
Ah.14g086010 Amaranthus hybridus
AL1G49750 Arabidopsis lyrata
AL6G44260 Arabidopsis lyrata
AL7G34410 Arabidopsis lyrata
Aqoxy1G01451 Aquilegia oxysepala
Aqoxy2G00630 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6SXA9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CU7UGG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ9VPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XF8MQ5 Arachis hypogaea
AT1G31300 Arabidopsis thaliana
AT4G10360 Arabidopsis thaliana
AT4G19645 Arabidopsis thaliana
ATR0763G143 Amborella trichopoda
ATR1127G047 Amborella trichopoda
Atru.chr10.2374 Acer truncatum
Atru.chr10.588 Acer truncatum
Atru.chr6.2022 Acer truncatum
AUR62003529 Chenopodium quinoa
AUR62017843 Chenopodium quinoa
AUR62034010 Chenopodium quinoa
AUR62038572 Chenopodium quinoa
BcaB02g07966 Brassica carinata
BcaB03g11637 Brassica carinata
BcaB03g13802 Brassica carinata
BcaB05g23905 Brassica carinata
BcaB07g32790 Brassica carinata
BcaC01g00626 Brassica carinata
BcaC03g16400 Brassica carinata
BcaC04g21032 Brassica carinata
BcaC05g27158 Brassica carinata
BcaC06g30630 Brassica carinata
BcaC09g51395 Brassica carinata
BcaNung01765 Brassica carinata
BolC1t01333H Brassica oleracea
BolC2t10273H Brassica oleracea
BolC3t20504H Brassica oleracea
BolC7t41955H Brassica oleracea
BolC9t56481H Brassica oleracea
BraA01t01101Z Brassica rapa
BraA02t07669Z Brassica rapa
BraA07t28742Z Brassica rapa
BraA08t33436Z Brassica rapa
BraA09t38432Z Brassica rapa
BraA09t39026Z Brassica rapa
C01p13590 Brassica napus
C02p42320 Brassica napus
C03p82500 Brassica napus
C05p30480 Brassica napus
C07p14560 Brassica napus
C09p36470 Brassica napus
CAN.G1190.2 Capsicum annuum
CAN.G275.19 Capsicum annuum
CAN.G3.16 Capsicum annuum
CAN.G675.3 Capsicum annuum
CANSAT35G1263 Cannabis sativa
CANSAT54G2143 Cannabis sativa
CANSAT64G0602 Cannabis sativa
CARHR030760 Cardamine hirsuta
CARHR226450 Cardamine hirsuta
CARHR256280 Cardamine hirsuta
Carub.0001s2973 Capsella rubella
Carub.0006s2896 Capsella rubella
Carub.0006s2898 Capsella rubella
Carub.0006s2900 Capsella rubella
Carub.0007s2152 Capsella rubella
Carub.0240s0001 Capsella rubella
Ca_06240_v3 Cicer arietinum L.
Ca_13916_v3 Cicer arietinum L.
Ca_15094_v3 Cicer arietinum L.
Cc00_g16470 Coffea canephora
Cc01_g15630 Coffea canephora
Cc05_g01080 Coffea canephora
Cc09_g06740 Coffea canephora
CDE02G3310 Ceratophyllum demersum
CDE05G1600 Ceratophyllum demersum
CDE07G1577 Ceratophyllum demersum
CDE12G0682 Ceratophyllum demersum
Cfa023017 Carpinus fangiana
Ciclev10002171m.g Citrus clementina
Ciclev10016228m.g Citrus clementina
Ciclev10032428m.g Citrus clementina
Ciclev10033188m.g Citrus clementina
CiPaw.09G152400 Carya illinoinensis
CiPaw.13G059100 Carya illinoinensis
CiPaw.14G047300 Carya illinoinensis
ClCG01G009070 Citrullus lanatus
ClCG02G018910 Citrullus lanatus
ClCG11G016570 Citrullus lanatus
COL.COLO4_08653 Corchorus olitorius
COL.COLO4_11233 Corchorus olitorius
COL.COLO4_30944 Corchorus olitorius
Cpa.g.sc135.44 Carica papaya
Cpa.g.sc2.246 Carica papaya
Cre08.g358531 Chlamydomonas reinhardtii
Cre12.g533650 Chlamydomonas reinhardtii
CsaV3_1G046450 Cucumis sativus L.
CsaV3_4G032030 Cucumis sativus L.
CsaV3_6G013280 Cucumis sativus L.
CSS0019641 Camellia sinensis var. sinensis
CSS0020587 Camellia sinensis var. sinensis
CSS0035115 Camellia sinensis var. sinensis
CSS0039732 Camellia sinensis var. sinensis
DCAR_001335 Daucus carota
DCAR_004318 Daucus carota
DCAR_012717 Daucus carota
DCAR_018594 Daucus carota
Dinv01088 Davidia involucrata
Dinv06107 Davidia involucrata
Dinv28768 Davidia involucrata
Duzib147G1189 Durio zibethinus
Duzib160G0775 Durio zibethinus
Duzib192G0841 Durio zibethinus
Duzib264G0736 Durio zibethinus
ECA246G5240 Erigeron canadensis
ECA247G3104 Erigeron canadensis
ECA248G2398 Erigeron canadensis
EL10Ac6g15350 Beta vulgaris
EL10Ac8g19559 Beta vulgaris
Eucgr.A02032 Eucalyptus grandis
Eucgr.E01925 Eucalyptus grandis
Eucgr.I02807 Eucalyptus grandis
FAN02G0905 Fragaria x ananassa
FAN05G3130 Fragaria x ananassa
FAN09G3855 Fragaria x ananassa
FAN11G3117 Fragaria x ananassa
FAN14G2953 Fragaria x ananassa
FAN16G0700 Fragaria x ananassa
FAN16G1983 Fragaria x ananassa
FAN21G0507 Fragaria x ananassa
FAN21G0727 Fragaria x ananassa
FAN25G0431 Fragaria x ananassa
FAN25G2490 Fragaria x ananassa
FvH4_3g11930 Fragaria vesca
FvH4_3g41280 Fragaria vesca
FvH4_6g38810 Fragaria vesca
Glyma.02G238600 Glycine max
Glyma.02G283000 Glycine max
Glyma.08G305100 Glycine max
Glyma.11G202100 Glycine max
Glyma.14G031400 Glycine max
Glyma.14G207500 Glycine max
Glyma.18G048700 Glycine max
Glyma.18G113300 Glycine max
Gohir.A05G144000 Gossypium hirsutum
Gohir.A05G380900 Gossypium hirsutum
Gohir.A08G000036 Gossypium hirsutum
Gohir.A09G008300 Gossypium hirsutum
Gohir.A10G046000 Gossypium hirsutum
Gohir.A11G061600 Gossypium hirsutum
Gohir.D02G107833 Gossypium hirsutum
Gohir.D04G034700 Gossypium hirsutum
Gohir.D05G146300 Gossypium hirsutum
Gohir.D08G007500 Gossypium hirsutum
Gohir.D09G007700 Gossypium hirsutum
Gohir.D10G047200 Gossypium hirsutum
Gohir.D10G129600 Gossypium hirsutum
Gohir.D11G065500 Gossypium hirsutum
Gohir.D12G000600 Gossypium hirsutum
Gorai.004G000700 Gossypium raimondii
Gorai.006G009300 Gossypium raimondii
Gorai.007G070700 Gossypium raimondii
Gorai.009G150200 Gossypium raimondii
Gorai.011G050300 Gossypium raimondii
Gorai.011G142900 Gossypium raimondii
Gorai.012G039200 Gossypium raimondii
GSVIVG01020826001 Vitis vinifera
GSVIVG01024517001 Vitis vinifera
GSVIVG01026279001 Vitis vinifera
HanXRQChr01g0013441 Helianthus annuus
HanXRQChr02g0033041 Helianthus annuus
HanXRQChr05g0134121 Helianthus annuus
HanXRQChr08g0231111 Helianthus annuus
Haze_06009 Corylus avellana
Haze_13617 Corylus avellana
Hma1.2p1_0161F.1_g071940 Hydrangea macrophylla
Hma1.2p1_0365F.1_g136720 Hydrangea macrophylla
HPP92_012288 Vanilla planifolia
HPP92_019765 Vanilla planifolia
Hund12744 Selenicereus undatus
Hund26561 Selenicereus undatus
Lalb_Chr04g0248971 Lupinus albus
Lalb_Chr10g0106521 Lupinus albus
Lalb_Chr17g0345741 Lupinus albus
Lalb_Chr18g0053991 Lupinus albus
Lalb_Chr20g0117231 Lupinus albus
Lj1C108G12 Lonicera japonica
Lj1C587G6 Lonicera japonica
Lj2C355T3 Lonicera japonica
Lj6g0009069 Lotus japonicus
Lj6g0022827 Lotus japonicus
LjContig00049g0023854 Lotus japonicus
Lsat_1_v5_gn_3_102821 Lactuca sativa
Lsat_1_v5_gn_5_175901 Lactuca sativa
Lsat_1_v5_gn_5_176820 Lactuca sativa
Lsat_1_v5_gn_9_15521 Lactuca sativa
Manes.02G088800 Manihot esculenta
Manes.16G051300 Manihot esculenta
Manes.18G122000 Manihot esculenta
Mapoly0035s0060 Marchantia polymorpha
MBI18_g29061_MAGBIO Magnolia biondii
MCO15G312 Micromonas commoda
MD03G1046000 Malus domestica
MD05G1256500 Malus domestica
MD09G1146700 Malus domestica
MD10G1237000 Malus domestica
MD11G1048300 Malus domestica
Medtr3g063070 Medicago truncatula
Medtr3g450410 Medicago truncatula
Medtr5g090550 Medicago truncatula
MELO3C019600.2 Cucumis melo
MELO3C021799.2 Cucumis melo
MELO3C022964.2 Cucumis melo
Migut.D00787 Erythranthe guttata
Migut.M00076 Erythranthe guttata
Migut.M01960 Erythranthe guttata
Migut.N00700 Erythranthe guttata
Migut.N00701 Erythranthe guttata
MSTRG.12724 Avicennia marina
MSTRG.14897 Avicennia marina
MSTRG.16328 Avicennia marina
MSTRG.17938 Avicennia marina
Nitab4.5_0000539g0070 Nicotiana tabacum
Nitab4.5_0002399g0010 Nicotiana tabacum
Nitab4.5_0005797g0060 Nicotiana tabacum
Nitab4.5_0010866g0020 Nicotiana tabacum
Nitab4.5_0012878g0010 Nicotiana tabacum
Nitab4.5_0021934g0010 Nicotiana tabacum
Nitab4.5_0022642g0010 Nicotiana tabacum
Nn7g38043 Nelumbo nucifera
Oeu000473.1 Olea europaea
Oeu012354.2 Olea europaea
Oeu023906.1 Olea europaea
Oeu034605.1 Olea europaea
Oeu063113.2 Olea europaea
Os01g0768200 Oryza sativa ssp. japonica
Os01g0817100 Oryza sativa ssp. japonica
Os03g0666700 Oryza sativa ssp. japonica
Os05g0485300 Oryza sativa ssp. japonica
Os05g0511000 Oryza sativa ssp. japonica
Peaxi162Scf00195g00009 Petunia axillaris
Peaxi162Scf00293g00511 Petunia axillaris
Peaxi162Scf00359g00107 Petunia axillaris
PGR042G0740 Punica granatum
PGR083G0948 Punica granatum
PGSC0003DMG400000930 Solanum tuberosum
PGSC0003DMG400021208 Solanum tuberosum
PGSC0003DMG400025401 Solanum tuberosum
Phvul.006G025300 Phaseolus vulgaris
Phvul.006G082800 Phaseolus vulgaris
Phvul.008G196100 Phaseolus vulgaris
Phvul.008G243400 Phaseolus vulgaris
Potri.002G056600 Populus trichocarpa
Potri.005G206000 Populus trichocarpa
Potri.012G118100 Populus trichocarpa
Potri.015G113200 Populus trichocarpa
Potri.019G133500 Populus trichocarpa
Pp3c3_6140 Physcomitrium patens
Pp3c4_24810 Physcomitrium patens
Prupe.3G178700 Prunus persica
Prupe.4G107300 Prunus persica
Prupe.6G037300 Prunus persica
Psat2g019040 Pisum sativum
Psat5g146160 Pisum sativum
Psat5g188880 Pisum sativum
PSO339G1742 Papaver somniferum
PSO384G5028 Papaver somniferum
PSO675G0082 Papaver somniferum
PSO675G9392 Papaver somniferum
QL01p023382 Quercus lobata
QL01p023390 Quercus lobata
QL08p045441 Quercus lobata
QL11p018418 Quercus lobata
RcHm_v2.0_Chr1g0360371 Rosa chinensis
RcHm_v2.0_Chr2g0152411 Rosa chinensis
RcHm_v2.0_Chr4g0386621 Rosa chinensis
RcHm_v2.0_Chr5g0019511 Rosa chinensis
RcHm_v2.0_Chr5g0074081 Rosa chinensis
Rhsim01G0245700 Rhododendron simsii
Rhsim13G0128500 Rhododendron simsii
Sabra02G0045900 Salix brachista
Sabra05G0156600 Salix brachista
Sabra12G0087500 Salix brachista
Sabra12G0090800 Salix brachista
Sabra15G0134800 Salix brachista
SalBow2G2403 Salvia bowleyana
SalBow7G1418 Salvia bowleyana
SalBow8G4513 Salvia bowleyana
Sc03g0006050 Simmondsia chinensis
Sc24g0003560 Simmondsia chinensis
Sed0000651 Sechium edule
Sed0014308 Sechium edule
Sed0017032 Sechium edule
Sed0022330 Sechium edule
Sed0026949 Sechium edule
SEGI_02801 Sequoiadendron giganteum
SEGI_09829 Sequoiadendron giganteum
SEGI_38532 Sequoiadendron giganteum
SGA_v2.0_scaffold120G33011 Striga asiatica
SGA_v2.0_scaffold3833G54399 Striga asiatica
SGA_v2.0_scaffold39G15239 Striga asiatica
SGA_v2.0_scaffold77G25336 Striga asiatica
SHI10462 Sapria himalayana
SMO364G0764 Selaginella moellendorffii
SMO367G0155 Selaginella moellendorffii
Solyc02g069350.4 Solanum lycopersicum
Solyc07g044990.3 Solanum lycopersicum
Solyc09g018670.3 Solanum lycopersicum
Sopen02g018500 Solanum pennellii
Sopen07g023520 Solanum pennellii
Sopen09g012200 Solanum pennellii
Sp1g27120 Schrenkiella parvula
Sp6g07060 Schrenkiella parvula
Sp7g18200 Schrenkiella parvula
TAR624G0849 Trochodendron aralioides
TAR626G0148 Trochodendron aralioides
THA.LOC104798548 Tarenaya hassleriana
THA.LOC104806476 Tarenaya hassleriana
THA.LOC104810273 Tarenaya hassleriana
THA.LOC104811454 Tarenaya hassleriana
THA.LOC104812714 Tarenaya hassleriana
THA.LOC104825096 Tarenaya hassleriana
Thecc.01G167300 Theobroma cacao
Thecc.06G136900 Theobroma cacao
Thecc.09G366800 Theobroma cacao
Thhalv10008439m.g Eutrema salsugineum
Thhalv10025981m.g Eutrema salsugineum
Thhalv10028888m.g Eutrema salsugineum
TPR.G14739 Trifolium pratense
TPR.G37344 Trifolium pratense
TPR.G8791 Trifolium pratense
TWI14G1415 Tripterygium wilfordii
TWI38G0399 Tripterygium wilfordii
TWI38G2123 Tripterygium wilfordii
TWI59G0089 Tripterygium wilfordii
TWI59G0988 Tripterygium wilfordii
unitig_0.g1154 Utricularia gibba
unitig_0.g221 Utricularia gibba
unitig_37.g12058 Utricularia gibba
unitig_60.g25718 Utricularia gibba
unitig_92.g28187 Utricularia gibba
vmacro03496 Vaccinium macrocarpon
vmacro14662 Vaccinium macrocarpon
VMungo0540G1639 Vigna mungo
VMungo0540G1918 Vigna mungo
VMungo0647G0866 Vigna mungo
VMungo0647G1587 Vigna mungo
VMungo1215G2006 Vigna mungo
Zm00001eb065450 Zea mays
Zm00001eb149750 Zea mays
Zm00001eb217740 Zea mays
Zm00001eb352940 Zea mays
Zm00001eb370150 Zea mays

User provided reference genes

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