Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14820 Brassica napus
A03p19100 Brassica napus
A05p11320 Brassica napus
A05p11330 Brassica napus
Aa31LG6G6730 Aethionema arabicum
Aa31LG9G14080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.864 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3242 Anthoceros agrestis
Actinidia09323 Actinidia chinensis
Actinidia09324 Actinidia chinensis
Actinidia39219 Actinidia chinensis
Ah.09g229240 Amaranthus hybridus
Ah.13g076500 Amaranthus hybridus
AL4G30320 Arabidopsis lyrata
AL6G33890 Arabidopsis lyrata
AL7G29870 Arabidopsis lyrata
Aqoxy2G00202 Aquilegia oxysepala
Aqoxy7G03292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0K9KEY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4S1ZVA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.704H70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXN0TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R22IQ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2P6Y8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea
AT2G34357 Arabidopsis thaliana
AT4G23540 Arabidopsis thaliana
ATR0681G226 Amborella trichopoda
ATR0681G387 Amborella trichopoda
ATR0709G027 Amborella trichopoda
ATR0730G042 Amborella trichopoda
Atru.chr1.1111 Acer truncatum
Atru.chr7.1751 Acer truncatum
Atru.chr7.1752 Acer truncatum
AUR62019633 Chenopodium quinoa
AUR62024456 Chenopodium quinoa
AUR62024457 Chenopodium quinoa
AUR62025277 Chenopodium quinoa
AUR62026046 Chenopodium quinoa
AUR62028280 Chenopodium quinoa
AUR62028281 Chenopodium quinoa
AUR62039592 Chenopodium quinoa
BcaB01g03896 Brassica carinata
BcaB02g09558 Brassica carinata
BcaC01g05798 Brassica carinata
BcaC02g11500 Brassica carinata
BcaC02g11606 Brassica carinata
BcaC09g50980 Brassica carinata
BcaNung01063 Brassica carinata
BcaNung01064 Brassica carinata
BolC1t01774H Brassica oleracea
BolC3t14614H Brassica oleracea
BolC4t23047H Brassica oleracea
BraA01t01423Z Brassica rapa
BraA03t11167Z Brassica rapa
BraA05t20081Z Brassica rapa
C01p18510 Brassica napus
C03p22320 Brassica napus
C04p13350 Brassica napus
C04p14660 Brassica napus
C04p14670 Brassica napus
CAN.G283.7 Capsicum annuum
CAN.G333.13 Capsicum annuum
CAN.G333.14 Capsicum annuum
CAN.G333.15 Capsicum annuum
CAN.G63.12 Capsicum annuum
CAN.G676.32 Capsicum annuum
CAN.G906.7 Capsicum annuum
CANSAT56G3462 Cannabis sativa
CANSAT80G2527 Cannabis sativa
CARHR112970 Cardamine hirsuta
CARHR128440 Cardamine hirsuta
CARHR230910 Cardamine hirsuta
Carub.0004s1602 Capsella rubella
Carub.0007s1775 Capsella rubella
Ca_09790_v3 Cicer arietinum L.
Ca_26352_v3 Cicer arietinum L.
CBR_g11184 Chara braunii
CBR_g11186 Chara braunii
Cc02_g36160 Coffea canephora
Cc06_g12580 Coffea canephora
Cc06_g17610 Coffea canephora
Cc06_g17620 Coffea canephora
CDE04G0230 Ceratophyllum demersum
CDE10G0506 Ceratophyllum demersum
CDE10G1259 Ceratophyllum demersum
CDE12G0121 Ceratophyllum demersum
CDE12G0161 Ceratophyllum demersum
CDE12G0742 Ceratophyllum demersum
Cfa002954 Carpinus fangiana
Cfa016809 Carpinus fangiana
Cfa025324 Carpinus fangiana
Ciclev10006456m.g Citrus clementina
Ciclev10023308m.g Citrus clementina
CiPaw.03G202600 Carya illinoinensis
CiPaw.09G038800 Carya illinoinensis
ClCG03G014800 Citrullus lanatus
ClCG10G015770 Citrullus lanatus
COL.COLO4_21223 Corchorus olitorius
COL.COLO4_28301 Corchorus olitorius
COL.COLO4_28302 Corchorus olitorius
Cpa.g.sc32.6 Carica papaya
Cpa.g.sc33.205 Carica papaya
Cre19.g751197 Chlamydomonas reinhardtii
CsaV3_1G041350 Cucumis sativus L.
CsaV3_3G040670 Cucumis sativus L.
CSS0017458 Camellia sinensis var. sinensis
CSS0037723 Camellia sinensis var. sinensis
DCAR_003861 Daucus carota
DCAR_005064 Daucus carota
DCAR_009063 Daucus carota
Dinv07243 Davidia involucrata
Dinv12498 Davidia involucrata
Dinv12499 Davidia involucrata
Dinv25520 Davidia involucrata
Dinv25554 Davidia involucrata
Dinv30816 Davidia involucrata
Duzib093G0255 Durio zibethinus
Duzib168G0208 Durio zibethinus
ECA233G4333 Erigeron canadensis
ECA240G3214 Erigeron canadensis
ECA247G0166 Erigeron canadensis
EL10Ac3g07096 Beta vulgaris
EL10Ac3g07097 Beta vulgaris
EL10Ac8g19018 Beta vulgaris
EL10Ac8g19019 Beta vulgaris
Eucgr.C00777 Eucalyptus grandis
Eucgr.K01741 Eucalyptus grandis
Eucgr.K01742 Eucalyptus grandis
Eucgr.K01758 Eucalyptus grandis
Eucgr.K01775 Eucalyptus grandis
Eucgr.K01787 Eucalyptus grandis
Eucgr.K01788 Eucalyptus grandis
Eucgr.K01801 Eucalyptus grandis
Eucgr.K01988 Eucalyptus grandis
Eucgr.K01992 Eucalyptus grandis
Eucgr.K02004 Eucalyptus grandis
FAN02G3624 Fragaria x ananassa
FAN04G1085 Fragaria x ananassa
FAN04G1199 Fragaria x ananassa
FAN04G1381 Fragaria x ananassa
FAN05G1753 Fragaria x ananassa
FAN08G1830 Fragaria x ananassa
FAN10G4203 Fragaria x ananassa
FAN14G2551 Fragaria x ananassa
FAN18G0943 Fragaria x ananassa
FAN18G1935 Fragaria x ananassa
FAN19G0770 Fragaria x ananassa
FAN19G0960 Fragaria x ananassa
FAN19G0975 Fragaria x ananassa
FAN19G1230 Fragaria x ananassa
FAN19G1672 Fragaria x ananassa
FAN19G1997 Fragaria x ananassa
FAN19G2992 Fragaria x ananassa
FAN23G1058 Fragaria x ananassa
FAN23G1590 Fragaria x ananassa
FAN23G2122 Fragaria x ananassa
FAN23G2998 Fragaria x ananassa
FAN26G0091 Fragaria x ananassa
FAN26G0106 Fragaria x ananassa
FAN26G0455 Fragaria x ananassa
FAN26G0957 Fragaria x ananassa
FAN26G1120 Fragaria x ananassa
FAN26G1219 Fragaria x ananassa
FAN26G1945 Fragaria x ananassa
FAN26G3315 Fragaria x ananassa
FAN26G3321 Fragaria x ananassa
FAN26G3327 Fragaria x ananassa
FAN26G3373 Fragaria x ananassa
FAN28G0236 Fragaria x ananassa
FAN28G1182 Fragaria x ananassa
FAN28G3010 Fragaria x ananassa
FvH4_1g08660 Fragaria vesca
FvH4_1g08670 Fragaria vesca
FvH4_1g08691 Fragaria vesca
FvH4_1g08730 Fragaria vesca
FvH4_1g08750 Fragaria vesca
FvH4_1g09210 Fragaria vesca
FvH4_1g13570 Fragaria vesca
FvH4_1g13590 Fragaria vesca
FvH4_1g13610 Fragaria vesca
FvH4_1g21223 Fragaria vesca
FvH4_5g05990 Fragaria vesca
FvH4_5g06040 Fragaria vesca
FvH4_6g18960 Fragaria vesca
FvH4_6g24030 Fragaria vesca
FvH4_7g02570 Fragaria vesca
Glyma.02G184900 Glycine max
Glyma.02G185000 Glycine max
Glyma.13G112900 Glycine max
Glyma.17G046900 Glycine max
Glyma.17G187700 Glycine max
Gohir.A07G016500 Gossypium hirsutum
Gohir.A11G312800 Gossypium hirsutum
Gohir.D07G016300 Gossypium hirsutum
Gohir.D11G329500 Gossypium hirsutum
Gorai.001G017100 Gossypium raimondii
Gorai.007G360700 Gossypium raimondii
GSVIVG01023097001 Vitis vinifera
GSVIVG01033265001 Vitis vinifera
GSVIVG01037083001 Vitis vinifera
HanXRQChr02g0038201 Helianthus annuus
HanXRQChr04g0122371 Helianthus annuus
HanXRQChr04g0122381 Helianthus annuus
HanXRQChr09g0273551 Helianthus annuus
HanXRQChr10g0281301 Helianthus annuus
HanXRQChr10g0296671 Helianthus annuus
Haze_19848 Corylus avellana
Haze_26051 Corylus avellana
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla
Hma1.2p1_1041F.1_g250970 Hydrangea macrophylla
Hma1.2p1_1041F.1_g250980 Hydrangea macrophylla
Hma1.2p1_1041F.1_g250990 Hydrangea macrophylla
Hma1.2p1_2078F.1_g313390 Hydrangea macrophylla
Hma1.2p1_2078F.1_g313400 Hydrangea macrophylla
Hma1.2p1_3124F.1_g332880 Hydrangea macrophylla
Hma1.2p1_3124F.1_g332890 Hydrangea macrophylla
HPP92_004359 Vanilla planifolia
HPP92_012087 Vanilla planifolia
Hund23253 Selenicereus undatus
Hund24703 Selenicereus undatus
Lalb_Chr12g0200311 Lupinus albus
Lalb_Chr13g0299281 Lupinus albus
Lalb_Chr21g0316501 Lupinus albus
Lj4g0016027 Lotus japonicus
Lj5g0016851 Lotus japonicus
Lj7C690T11 Lonicera japonica
Lju124C42G12 Lonicera japonica
Lsat_1_v5_gn_6_98861 Lactuca sativa
Lsat_1_v5_gn_7_35381 Lactuca sativa
Lsat_1_v5_gn_9_19021 Lactuca sativa
Lsat_1_v5_gn_9_19041 Lactuca sativa
Lsat_1_v5_gn_9_19960 Lactuca sativa
Lsat_1_v5_gn_9_30560 Lactuca sativa
Manes.09G020800 Manihot esculenta
Manes.16G091500 Manihot esculenta
Mapoly0061s0020 Marchantia polymorpha
MBI18_g31798_MAGBIO Magnolia biondii
MBI19_g41435_MAGBIO Magnolia biondii
MBI19_g44839_MAGBIO Magnolia biondii
MCO03G474 Micromonas commoda
MD02G1098800 Malus domestica
MD02G1098900 Malus domestica
MD02G1099100 Malus domestica
MD12G1075000 Malus domestica
MD14G1073100 Malus domestica
MD15G1221900 Malus domestica
Medtr1g053255 Medicago truncatula
Medtr1g072890 Medicago truncatula
Medtr1g072970 Medicago truncatula
MELO3C009801.2 Cucumis melo
MELO3C015548.2 Cucumis melo
Migut.J00896 Erythranthe guttata
Migut.J01753 Erythranthe guttata
MSTRG.19857 Avicennia marina
MSTRG.5982 Avicennia marina
Nitab4.5_0000586g0090 Nicotiana tabacum
Nitab4.5_0001565g0110 Nicotiana tabacum
Nitab4.5_0007773g0020 Nicotiana tabacum
Nitab4.5_0009615g0010 Nicotiana tabacum
Nn1g04408 Nelumbo nucifera
Nn7g36309 Nelumbo nucifera
Nn8g40294 Nelumbo nucifera
Oeu033011.1 Olea europaea
Oeu055335.1 Olea europaea
Os01g0957900 Oryza sativa ssp. japonica
Os02g0782100 Oryza sativa ssp. japonica
Peaxi162Scf00130g00214 Petunia axillaris
Peaxi162Scf00191g01112 Petunia axillaris
PGR142G2644 Punica granatum
PGR142G3865 Punica granatum
Phvul.003G128600 Phaseolus vulgaris
Phvul.007G252200 Phaseolus vulgaris
Potri.006G050000 Populus trichocarpa
Potri.006G137900 Populus trichocarpa
Pp3c1_37650 Physcomitrium patens
Pp3c2_3190 Physcomitrium patens
PRCOL_00004092 Prasinoderma coloniale
Prupe.6G204300 Prunus persica
Prupe.6G204500 Prunus persica
Prupe.7G058600 Prunus persica
Prupe.7G186700 Prunus persica
Prupe.7G193800 Prunus persica
Psat1g086960 Pisum sativum
Psat6g118760 Pisum sativum
Psat6g134600 Pisum sativum
Psat7g002920 Pisum sativum
Psat7g038680 Pisum sativum
PSO063G4314 Papaver somniferum
PSO104G0064 Papaver somniferum
PSO421G0331 Papaver somniferum
PSO675G4789 Papaver somniferum
QL07p000798 Quercus lobata
QL07p000806 Quercus lobata
QL07p001861 Quercus lobata
QL11p002157 Quercus lobata
RcHm_v2.0_Chr2g0094991 Rosa chinensis
RcHm_v2.0_Chr2g0095061 Rosa chinensis
RcHm_v2.0_Chr2g0095131 Rosa chinensis
RcHm_v2.0_Chr2g0095731 Rosa chinensis
RcHm_v2.0_Chr2g0121761 Rosa chinensis
RcHm_v2.0_Chr3g0482611 Rosa chinensis
Rhsim03G0025300 Rhododendron simsii
Rhsim03G0026000 Rhododendron simsii
Rhsim05G0003800 Rhododendron simsii
Rhsim09G0172800 Rhododendron simsii
Rhsim09G0182900 Rhododendron simsii
Rhsim09G0183000 Rhododendron simsii
Rhsim09G0183100 Rhododendron simsii
Rhsim13G0126900 Rhododendron simsii
Sabra06G0034900 Salix brachista
Sabra18G0055900 Salix brachista
SalBow6G2278 Salvia bowleyana
Sc13g0001700 Simmondsia chinensis
Sc18g0003470 Simmondsia chinensis
Sc24g0001530 Simmondsia chinensis
Sed0004072 Sechium edule
Sed0004150 Sechium edule
Sed0021617 Sechium edule
SEGI_16086 Sequoiadendron giganteum
SEGI_25708 Sequoiadendron giganteum
SEGI_37036 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30404 Striga asiatica
SGA_v2.0_scaffold281G46906 Striga asiatica
SHI02768 Sapria himalayana
SHI02769 Sapria himalayana
SHI37393 Sapria himalayana
SMO361G0459 Selaginella moellendorffii
Solyc04g015940.3 Solanum lycopersicum
Solyc07g042380.4 Solanum lycopersicum
Sopen04g007950 Solanum pennellii
Sopen07g021980 Solanum pennellii
Sp4g16630 Schrenkiella parvula
Sp7g21460 Schrenkiella parvula
TAR383G0739 Trochodendron aralioides
TAR623G1060 Trochodendron aralioides
THA.LOC104804954 Tarenaya hassleriana
THA.LOC104806422 Tarenaya hassleriana
THA.LOC104807000 Tarenaya hassleriana
THA.LOC104809049 Tarenaya hassleriana
Thecc.05G152600 Theobroma cacao
Thecc.09G071800 Theobroma cacao
Thhalv10016153m.g Eutrema salsugineum
Thhalv10024271m.g Eutrema salsugineum
TPR.G10174 Trifolium pratense
TPR.G10190 Trifolium pratense
TPR.G13945 Trifolium pratense
TPR.G18558 Trifolium pratense
TPR.G29097 Trifolium pratense
TPR.G34376 Trifolium pratense
TWI32G0648 Tripterygium wilfordii
TWI74G0913 Tripterygium wilfordii
unitig_578.g15982 Utricularia gibba
unitig_744.g24652 Utricularia gibba
vmacro07843 Vaccinium macrocarpon
vmacro17095 Vaccinium macrocarpon
vmacro17096 Vaccinium macrocarpon
vmacro17113 Vaccinium macrocarpon
vmacro17114 Vaccinium macrocarpon
vmacro17115 Vaccinium macrocarpon
vmacro23083 Vaccinium macrocarpon
vmacro23084 Vaccinium macrocarpon
VMungo0464G0523 Vigna mungo
VMungo0720G0235 Vigna mungo
VMungo0720G2535 Vigna mungo
VMungo1215G0229 Vigna mungo
Zm00001eb140500 Zea mays
Zm00001eb173780 Zea mays
Zm00001eb257110 Zea mays

User provided reference genes

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