Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19710 Brassica napus
A03p08270 Brassica napus
A03p33340 Brassica napus
A05p43710 Brassica napus
A05p43950 Brassica napus
A06p26340 Brassica napus
Aa31LG11G12370 Aethionema arabicum
Aa31LG5G13850 Aethionema arabicum
Aa31LG5G14110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.194 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.431 Anthoceros agrestis
Actinidia17166 Actinidia chinensis
Actinidia17167 Actinidia chinensis
Actinidia26430 Actinidia chinensis
Actinidia28784 Actinidia chinensis
Actinidia35712 Actinidia chinensis
Actinidia40419 Actinidia chinensis
Ah.04g163000 Amaranthus hybridus
Ah.13g073670 Amaranthus hybridus
AL3G12860 Arabidopsis lyrata
AL3G13370 Arabidopsis lyrata
AL6G28390 Arabidopsis lyrata
Aqoxy2G02163 Aquilegia oxysepala
Aqoxy2G02400 Aquilegia oxysepala
Aqoxy340s001 Aquilegia oxysepala
Aqoxy3G04124 Aquilegia oxysepala
Aqoxy4G00073 Aquilegia oxysepala
Aqoxy7G03741 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FF5IX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3YR680 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4MRL1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.897E8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2736W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A8CT9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F91WU6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VEWU5V Arachis hypogaea
AT3G03250 Arabidopsis thaliana
AT3G03600 Arabidopsis thaliana
AT5G17310 Arabidopsis thaliana
ATR0660G006 Amborella trichopoda
ATR0807G128 Amborella trichopoda
Atru.chr1.2162 Acer truncatum
Atru.chr9.238 Acer truncatum
AUR62003403 Chenopodium quinoa
AUR62003404 Chenopodium quinoa
AUR62004774 Chenopodium quinoa
AUR62020701 Chenopodium quinoa
AUR62028023 Chenopodium quinoa
BcaB01g04947 Brassica carinata
BcaB01g05211 Brassica carinata
BcaB04g19363 Brassica carinata
BcaC01g04396 Brassica carinata
BcaC02g09516 Brassica carinata
BcaC05g29865 Brassica carinata
BcaC05g29872 Brassica carinata
BcaC05g30264 Brassica carinata
BcaC05g30312 Brassica carinata
BcaC09g47739 Brassica carinata
BcaC09g48535 Brassica carinata
BNapus_Darmor_BZH_scaffold_162p00100 Brassica napus
BNapus_Darmor_BZH_scaffold_78p00090 Brassica napus
BolC1t05837H Brassica oleracea
BolC3t16323H Brassica oleracea
BolC4t25944H Brassica oleracea
BolC5t34992H Brassica oleracea
BolC5t35024H Brassica oleracea
BraA01t04586Z Brassica rapa
BraA03t10147Z Brassica rapa
BraA03t12505Z Brassica rapa
BraA05t23110Z Brassica rapa
BraA05t23131Z Brassica rapa
C03p09620 Brassica napus
C03p40580 Brassica napus
C03p74560 Brassica napus
C04p32130 Brassica napus
C04p54460 Brassica napus
C05p63290 Brassica napus
C05p63560 Brassica napus
CAN.G1186.7 Capsicum annuum
CAN.G1249.13 Capsicum annuum
CAN.G449.11 Capsicum annuum
CANSAT54G2999 Cannabis sativa
CANSAT78G1742 Cannabis sativa
CARHR077270 Cardamine hirsuta
CARHR077640 Cardamine hirsuta
Carub.0003s0240 Capsella rubella
Carub.0003s0276 Capsella rubella
Carub.0006s1550 Capsella rubella
Ca_15286_v3 Cicer arietinum L.
Ca_15422_v3 Cicer arietinum L.
Ca_17067_v3 Cicer arietinum L.
CBR_g4484 Chara braunii
Cc00_g03970 Coffea canephora
Cc00_g09400 Coffea canephora
Cc00_g21940 Coffea canephora
Cc02_g26560 Coffea canephora
Cc02_g26570 Coffea canephora
Cc05_g05120 Coffea canephora
Cc06_g20100 Coffea canephora
Cc07_g12830 Coffea canephora
Cc07_g19670 Coffea canephora
Cc08_g05780 Coffea canephora
CDE02G0713 Ceratophyllum demersum
CDE04G1424 Ceratophyllum demersum
Cfa003706 Carpinus fangiana
Cfa007757 Carpinus fangiana
Cfa025866 Carpinus fangiana
Ciclev10011657m.g Citrus clementina
Ciclev10023278m.g Citrus clementina
CiPaw.02G047900 Carya illinoinensis
CiPaw.03G076600 Carya illinoinensis
CiPaw.04G049000 Carya illinoinensis
ClCG05G011350 Citrullus lanatus
ClCG08G014080 Citrullus lanatus
COL.COLO4_19771 Corchorus olitorius
COL.COLO4_21825 Corchorus olitorius
Cpa.g.sc178.21 Carica papaya
Cpa.g.sc73.32 Carica papaya
Cre04.g229700 Chlamydomonas reinhardtii
CsaV3_2G024360 Cucumis sativus L.
CsaV3_3G021110 Cucumis sativus L.
CSS0001376 Camellia sinensis var. sinensis
CSS0002027 Camellia sinensis var. sinensis
CSS0011354 Camellia sinensis var. sinensis
CSS0028389 Camellia sinensis var. sinensis
CSS0033291 Camellia sinensis var. sinensis
CSS0043880 Camellia sinensis var. sinensis
DCAR_003411 Daucus carota
DCAR_014145 Daucus carota
DCAR_029572 Daucus carota
Dinv19076 Davidia involucrata
Dinv19320 Davidia involucrata
Dinv28238 Davidia involucrata
Dinv43956 Davidia involucrata
Duzib106G0611 Durio zibethinus
Duzib138G1439 Durio zibethinus
ECA246G3382 Erigeron canadensis
EL10Ac2g03646 Beta vulgaris
EL10Ac4g08931 Beta vulgaris
EL10Ac5g12355 Beta vulgaris
Eucgr.D01117 Eucalyptus grandis
Eucgr.F02905 Eucalyptus grandis
FAN01G0027 Fragaria x ananassa
FAN03G0842 Fragaria x ananassa
FAN06G0601 Fragaria x ananassa
FAN10G0402 Fragaria x ananassa
FAN19G1940 Fragaria x ananassa
FAN23G0919 Fragaria x ananassa
FAN23G2775 Fragaria x ananassa
FAN26G3480 Fragaria x ananassa
FAN28G2921 Fragaria x ananassa
FvH4_1g27720 Fragaria vesca
FvH4_7g08140 Fragaria vesca
Glyma.02G241100 Glycine max
Glyma.06G001900 Glycine max
Glyma.11G210989 Glycine max
Glyma.14G210700 Glycine max
Glyma.18G044400 Glycine max
Gohir.A08G038600 Gossypium hirsutum
Gohir.A11G169600 Gossypium hirsutum
Gohir.A11G224218 Gossypium hirsutum
Gohir.D01G182000 Gossypium hirsutum
Gohir.D04G053800 Gossypium hirsutum
Gohir.D08G048800 Gossypium hirsutum
Gohir.D08G090366 Gossypium hirsutum
Gohir.D09G022050 Gossypium hirsutum
Gohir.D09G041125 Gossypium hirsutum
Gohir.D10G093950 Gossypium hirsutum
Gohir.D10G162298 Gossypium hirsutum
Gohir.D11G175800 Gossypium hirsutum
Gohir.D11G184600 Gossypium hirsutum
Gohir.D11G237300 Gossypium hirsutum
Gohir.D11G243650 Gossypium hirsutum
Gohir.D12G069601 Gossypium hirsutum
Gohir.D13G140500 Gossypium hirsutum
Gorai.003G092100 Gossypium raimondii
Gorai.004G048300 Gossypium raimondii
Gorai.005G063100 Gossypium raimondii
Gorai.006G047500 Gossypium raimondii
Gorai.007G188400 Gossypium raimondii
Gorai.007G250600 Gossypium raimondii
Gorai.008G076300 Gossypium raimondii
Gorai.009G415300 Gossypium raimondii
Gorai.011G102900 Gossypium raimondii
Gorai.011G181500 Gossypium raimondii
Gorai.011G201100 Gossypium raimondii
GSVIVG01026561001 Vitis vinifera
GSVIVG01026563001 Vitis vinifera
HanXRQChr04g0117601 Helianthus annuus
HanXRQChr05g0139891 Helianthus annuus
HanXRQChr15g0482381 Helianthus annuus
HanXRQChr16g0501591 Helianthus annuus
HanXRQChr16g0532261 Helianthus annuus
Haze_14315 Corylus avellana
Haze_15782 Corylus avellana
Haze_27514 Corylus avellana
HPP92_003187 Vanilla planifolia
Hund06872 Selenicereus undatus
Hund19368 Selenicereus undatus
Hund22202 Selenicereus undatus
Lalb_Chr15g0085251 Lupinus albus
Lalb_Chr18g0053731 Lupinus albus
Lalb_Chr18g0053741 Lupinus albus
Lalb_Chr20g0117091 Lupinus albus
Lalb_Chr23g0264941 Lupinus albus
Lj1g0025923 Lotus japonicus
Lj2A512T37 Lonicera japonica
Lj4A253T37 Lonicera japonica
Lj7P561T30 Lonicera japonica
LjContig00141g0019465 Lotus japonicus
Lsat_1_v5_gn_3_67140 Lactuca sativa
Lsat_1_v5_gn_4_100620 Lactuca sativa
Lsat_1_v5_gn_4_129760 Lactuca sativa
Lsat_1_v5_gn_4_139181 Lactuca sativa
Lsat_1_v5_gn_4_60761 Lactuca sativa
Lsat_1_v5_gn_5_59200 Lactuca sativa
Lsat_1_v5_gn_6_1260 Lactuca sativa
Lsat_1_v5_gn_7_34060 Lactuca sativa
Manes.01G123000 Manihot esculenta
Manes.02G080600 Manihot esculenta
Manes.08G156000 Manihot esculenta
Mapoly0072s0036 Marchantia polymorpha
MBI06_g07519_MAGBIO Magnolia biondii
MBI06_g07521_MAGBIO Magnolia biondii
MBI08_g09800_MAGBIO Magnolia biondii
MD02G1230600 Malus domestica
MD07G1082100 Malus domestica
MD09G1278300 Malus domestica
MD17G1271300 Malus domestica
Medtr3g064480 Medicago truncatula
Medtr3g064490 Medicago truncatula
Medtr3g118200 Medicago truncatula
Medtr5g077000 Medicago truncatula
Medtr5g099590 Medicago truncatula
MELO3C011346.2 Cucumis melo
MELO3C020244.2 Cucumis melo
Migut.B01416 Erythranthe guttata
Migut.K00740 Erythranthe guttata
MSTRG.20625 Avicennia marina
MSTRG.3676 Avicennia marina
Nitab4.5_0000143g0530 Nicotiana tabacum
Nitab4.5_0000792g0200 Nicotiana tabacum
Nitab4.5_0001198g0330 Nicotiana tabacum
Nitab4.5_0001735g0060 Nicotiana tabacum
Nitab4.5_0007787g0030 Nicotiana tabacum
Nitab4.5_0009147g0020 Nicotiana tabacum
Nn044s41810 Nelumbo nucifera
Nn1g10086 Nelumbo nucifera
Nn3g18506 Nelumbo nucifera
Nn4g24687 Nelumbo nucifera
Oeu012522.2 Olea europaea
Oeu039701.1 Olea europaea
Oeu060721.2 Olea europaea
Os01g0264100 Oryza sativa ssp. japonica
Os02g0117700 Oryza sativa ssp. japonica
Os09g0553200 Oryza sativa ssp. japonica
Peaxi162Scf00063g00410 Petunia axillaris
Peaxi162Scf00063g00616 Petunia axillaris
Peaxi162Scf00990g00128 Petunia axillaris
Peaxi162Scf01260g00014 Petunia axillaris
PGR004G2261 Punica granatum
PGR042G3423 Punica granatum
PGR044G0034 Punica granatum
PGSC0003DMG401013333 Solanum tuberosum
PGSC0003DMG401031123 Solanum tuberosum
Phvul.008G240600 Phaseolus vulgaris
Phvul.009G117800 Phaseolus vulgaris
Potri.004G074400 Populus trichocarpa
Potri.004G074602 Populus trichocarpa
Potri.004G074750 Populus trichocarpa
Potri.013G070001 Populus trichocarpa
Potri.017G144700 Populus trichocarpa
Pp3c11_690 Physcomitrium patens
Pp3c1_140 Physcomitrium patens
Pp3c23_20400 Physcomitrium patens
Prupe.2G107500 Prunus persica
Prupe.3G015000 Prunus persica
Psat0s3165g0080 Pisum sativum
Psat2g043240 Pisum sativum
Psat3g194080 Pisum sativum
Psat5g001280 Pisum sativum
Psat5g142160 Pisum sativum
Psat5g255000 Pisum sativum
PSO063G7403 Papaver somniferum
PSO782G3656 Papaver somniferum
QL02p064794 Quercus lobata
QL08p048200 Quercus lobata
RcHm_v2.0_Chr1g0341081 Rosa chinensis
RcHm_v2.0_Chr1g0363821 Rosa chinensis
RcHm_v2.0_Chr1g0383121 Rosa chinensis
RcHm_v2.0_Chr2g0085551 Rosa chinensis
RcHm_v2.0_Chr3g0481141 Rosa chinensis
RcHm_v2.0_Chr3g0488851 Rosa chinensis
RcHm_v2.0_Chr5g0027611 Rosa chinensis
RcHm_v2.0_Chr5g0036111 Rosa chinensis
RcHm_v2.0_Chr5g0054321 Rosa chinensis
RcHm_v2.0_Chr6g0246101 Rosa chinensis
Rhsim07G0048200 Rhododendron simsii
Rhsim08G0020900 Rhododendron simsii
Rhsim10G0185000 Rhododendron simsii
Sabra04G0049200 Salix brachista
Sabra04G0049300 Salix brachista
Sabra04G0049400 Salix brachista
Sabra13G0060700 Salix brachista
Sabra15G0083200 Salix brachista
Sabra17G0121200 Salix brachista
SalBow5G0061 Salvia bowleyana
SalBow5G0948 Salvia bowleyana
SalBow5G5318 Salvia bowleyana
Sc06g0001410 Simmondsia chinensis
Sc09g0004470 Simmondsia chinensis
Sc20g0000780 Simmondsia chinensis
Sed0007038 Sechium edule
Sed0017083 Sechium edule
Sed0021856 Sechium edule
SEGI_07069 Sequoiadendron giganteum
SEGI_33272 Sequoiadendron giganteum
SEGI_38852 Sequoiadendron giganteum
SGA_v2.0_scaffold134G34733 Striga asiatica
SGA_v2.0_scaffold45G17115 Striga asiatica
SGA_v2.0_scaffold45G17117 Striga asiatica
SGA_v2.0_scaffold45G17118 Striga asiatica
SGA_v2.0_scaffold98G29368 Striga asiatica
SMO358G0524 Selaginella moellendorffii
Solyc01g081520.3 Solanum lycopersicum
Solyc05g054060.3 Solanum lycopersicum
Solyc11g011960.2 Solanum lycopersicum
Sopen01g033080 Solanum pennellii
Sopen05g032550 Solanum pennellii
Sopen11g006770 Solanum pennellii
Sp3g02280 Schrenkiella parvula
Sp3g02590 Schrenkiella parvula
Sp6g26920 Schrenkiella parvula
TAR362G0336 Trochodendron aralioides
TAR362G1142 Trochodendron aralioides
TAR622G0535 Trochodendron aralioides
THA.LOC104802909 Tarenaya hassleriana
THA.LOC104820811 Tarenaya hassleriana
THA.LOC104820859 Tarenaya hassleriana
THA.LOC104824596 Tarenaya hassleriana
Thecc.04G000500 Theobroma cacao
Thecc.05G236000 Theobroma cacao
Thhalv10013449m.g Eutrema salsugineum
Thhalv10020665m.g Eutrema salsugineum
Thhalv10021487m.g Eutrema salsugineum
TPR.G18898 Trifolium pratense
TPR.G38482 Trifolium pratense
TWI39G0742 Tripterygium wilfordii
TWI53G0883 Tripterygium wilfordii
TWI73G0070 Tripterygium wilfordii
TWI77G0925 Tripterygium wilfordii
unitig_0.g1363 Utricularia gibba
unitig_748.g7021 Utricularia gibba
unitig_748.g7251 Utricularia gibba
vmacro13603 Vaccinium macrocarpon
vmacro13604 Vaccinium macrocarpon
vmacro15942 Vaccinium macrocarpon
vmacro18513 Vaccinium macrocarpon
vmacro20474 Vaccinium macrocarpon
vmacro20476 Vaccinium macrocarpon
vmacro22734 Vaccinium macrocarpon
VMungo0251G3345 Vigna mungo
VMungo0647G0783 Vigna mungo
VMungo1127G2053 Vigna mungo
VMungo1309G3105 Vigna mungo
Zm00001eb104400 Zea mays
Zm00001eb141640 Zea mays
Zm00001eb168650 Zea mays
Zm00001eb185890 Zea mays
Zm00001eb230070 Zea mays
Zm00001eb301980 Zea mays
Zm00001eb320800 Zea mays
Zm00001eb354740 Zea mays

User provided reference genes

Program Settings