Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16640 Brassica napus
A05p21630 Brassica napus
A07p28000 Brassica napus
A09p57750 Brassica napus
Aa31LG4G7470 Aethionema arabicum
Aa31LG6G15570 Aethionema arabicum
Aa31LG6G9420 Aethionema arabicum
Aa31LG7G14580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1771 Anthoceros agrestis
Actinidia03457 Actinidia chinensis
Actinidia03458 Actinidia chinensis
Actinidia03459 Actinidia chinensis
Actinidia16049 Actinidia chinensis
Actinidia16050 Actinidia chinensis
Actinidia16052 Actinidia chinensis
Actinidia29479 Actinidia chinensis
Actinidia29480 Actinidia chinensis
Actinidia36608 Actinidia chinensis
Actinidia36609 Actinidia chinensis
Ah.02g122780 Amaranthus hybridus
Ah.02g122870 Amaranthus hybridus
Ah.05g170920 Amaranthus hybridus
AL1G52180 Arabidopsis lyrata
AL2G26130 Arabidopsis lyrata
AL2G37660 Arabidopsis lyrata
AL4G11470 Arabidopsis lyrata
Aqoxy6G00256 Aquilegia oxysepala
Aqoxy6G00541 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01D2LU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1QLE3S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7E9RS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URDF0Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URWE26 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZV0KA8 Arachis hypogaea
AT1G44120 Arabidopsis thaliana
AT1G77460 Arabidopsis thaliana
AT2G22125 Arabidopsis thaliana
ATR0564G414 Amborella trichopoda
ATR0584G057 Amborella trichopoda
Atru.chr4.258 Acer truncatum
AUR62002040 Chenopodium quinoa
AUR62003757 Chenopodium quinoa
AUR62014312 Chenopodium quinoa
AUR62019053 Chenopodium quinoa
BcaB02g07106 Brassica carinata
BcaB02g11455 Brassica carinata
BcaB06g27805 Brassica carinata
BcaB08g35040 Brassica carinata
BcaC02g08736 Brassica carinata
BcaC05g27649 Brassica carinata
BcaC07g41094 Brassica carinata
BcaC08g45477 Brassica carinata
BolC4t26708H Brassica oleracea
BolC5t32362H Brassica oleracea
BolC6t38264H Brassica oleracea
BolC8t51660H Brassica oleracea
BraA04t17298Z Brassica rapa
BraA05t21085Z Brassica rapa
BraA07t30445Z Brassica rapa
BraA09t41167Z Brassica rapa
C04p51190 Brassica napus
C05p36370 Brassica napus
C06p31250 Brassica napus
C08p40970 Brassica napus
CAN.G36.32 Capsicum annuum
CAN.G526.5 Capsicum annuum
CAN.G643.5 Capsicum annuum
CAN.G727.2 Capsicum annuum
CANSAT01G2642 Cannabis sativa
CANSAT25G2795 Cannabis sativa
CARHR035810 Cardamine hirsuta
CARHR070980 Cardamine hirsuta
CARHR113260 Cardamine hirsuta
Carub.0001s3504 Capsella rubella
Carub.0002s2435 Capsella rubella
Carub.0004s0127 Capsella rubella
Ca_02139_v3 Cicer arietinum L.
Ca_02181_v3 Cicer arietinum L.
Ca_12633_v3 Cicer arietinum L.
Ca_12635_v3 Cicer arietinum L.
Ca_16548_v3 Cicer arietinum L.
Ca_17710_v3 Cicer arietinum L.
Cc07_g15660 Coffea canephora
Cc10_g12190 Coffea canephora
CDE05G1359 Ceratophyllum demersum
CDE05G1916 Ceratophyllum demersum
CDE05G2319 Ceratophyllum demersum
CDE06G0113 Ceratophyllum demersum
CDE06G0514 Ceratophyllum demersum
CDE06G2410 Ceratophyllum demersum
CDE08G0083 Ceratophyllum demersum
CDE08G0619 Ceratophyllum demersum
CDE10G0009 Ceratophyllum demersum
CDE10G0584 Ceratophyllum demersum
CDE10G0669 Ceratophyllum demersum
CDE10G0792 Ceratophyllum demersum
CDE10G0848 Ceratophyllum demersum
Cfa002721 Carpinus fangiana
Cfa018569 Carpinus fangiana
Ciclev10000010m.g Citrus clementina
Ciclev10024684m.g Citrus clementina
CiPaw.03G138200 Carya illinoinensis
CiPaw.04G095300 Carya illinoinensis
CiPaw.15G034700 Carya illinoinensis
ClCG01G019020 Citrullus lanatus
ClCG11G015860 Citrullus lanatus
COL.COLO4_11049 Corchorus olitorius
COL.COLO4_37944 Corchorus olitorius
Cpa.g.sc231.9 Carica papaya
Cpa.g.sc64.114 Carica papaya
CsaV3_4G028120 Cucumis sativus L.
CsaV3_6G045710 Cucumis sativus L.
CSS0002742 Camellia sinensis var. sinensis
CSS0008281 Camellia sinensis var. sinensis
CSS0035982 Camellia sinensis var. sinensis
CSS0038089 Camellia sinensis var. sinensis
CSS0041613 Camellia sinensis var. sinensis
DCAR_011497 Daucus carota
DCAR_014379 Daucus carota
DCAR_032341 Daucus carota
Dinv14642 Davidia involucrata
Dinv16319 Davidia involucrata
Dinv21947 Davidia involucrata
Dinv21948 Davidia involucrata
Dinv21949 Davidia involucrata
Dinv27287 Davidia involucrata
Duzib093G1056 Durio zibethinus
Duzib147G0932 Durio zibethinus
Duzib264G0503 Durio zibethinus
ECA232G1264 Erigeron canadensis
ECA232G1964 Erigeron canadensis
ECA232G3402 Erigeron canadensis
ECA238G1388 Erigeron canadensis
ECA238G3863 Erigeron canadensis
EL10Ac1g01042 Beta vulgaris
EL10Ac6g15064 Beta vulgaris
Eucgr.F03806 Eucalyptus grandis
Eucgr.I00378 Eucalyptus grandis
FAN15G2251 Fragaria x ananassa
FAN19G0237 Fragaria x ananassa
FAN20G2941 Fragaria x ananassa
FAN23G1158 Fragaria x ananassa
FAN24G0700 Fragaria x ananassa
FAN26G2523 Fragaria x ananassa
FAN28G2305 Fragaria x ananassa
FvH4_1g21660 Fragaria vesca
FvH4_2g27420 Fragaria vesca
Glyma.05G181600 Glycine max
Glyma.08G139300 Glycine max
Glyma.11G237800 Glycine max
Glyma.13G030700 Glycine max
Glyma.14G152500 Glycine max
Glyma.18G019600 Glycine max
Gohir.A05G236900 Gossypium hirsutum
Gohir.A06G045900 Gossypium hirsutum
Gohir.A11G199000 Gossypium hirsutum
Gohir.A12G091200 Gossypium hirsutum
Gohir.D05G239000 Gossypium hirsutum
Gohir.D06G046400 Gossypium hirsutum
Gohir.D11G225100 Gossypium hirsutum
Gohir.D12G094700 Gossypium hirsutum
Gorai.007G242400 Gossypium raimondii
Gorai.008G103300 Gossypium raimondii
Gorai.009G247700 Gossypium raimondii
Gorai.010G051700 Gossypium raimondii
GSVIVG01008840001 Vitis vinifera
GSVIVG01022187001 Vitis vinifera
GSVIVG01031191001 Vitis vinifera
HanXRQChr07g0200591 Helianthus annuus
HanXRQChr09g0254661 Helianthus annuus
HanXRQChr14g0445551 Helianthus annuus
HanXRQChr15g0485431 Helianthus annuus
Haze_17511 Corylus avellana
Haze_24996 Corylus avellana
HPP92_005655 Vanilla planifolia
HPP92_005691 Vanilla planifolia
HPP92_005692 Vanilla planifolia
HPP92_013081 Vanilla planifolia
HPP92_013093 Vanilla planifolia
Hund13646 Selenicereus undatus
Hund16265 Selenicereus undatus
Hund17308 Selenicereus undatus
Hund26795 Selenicereus undatus
Lalb_Chr08g0231221 Lupinus albus
Lalb_Chr10g0101541 Lupinus albus
Lalb_Chr12g0203651 Lupinus albus
Lalb_Chr17g0343631 Lupinus albus
Lalb_Chr17g0343641 Lupinus albus
Lj1g0027448 Lotus japonicus
Lj4C880G9 Lonicera japonica
Lj4g0022101 Lotus japonicus
Lj6g0012862 Lotus japonicus
Lj7A344T47 Lonicera japonica
Lsat_1_v5_gn_1_18121 Lactuca sativa
Lsat_1_v5_gn_1_61261 Lactuca sativa
Lsat_1_v5_gn_2_53140 Lactuca sativa
Lsat_1_v5_gn_2_67780 Lactuca sativa
Lsat_1_v5_gn_3_127020 Lactuca sativa
Lsat_1_v5_gn_3_22081 Lactuca sativa
Lsat_1_v5_gn_4_137061 Lactuca sativa
Lsat_1_v5_gn_4_139981 Lactuca sativa
Lsat_1_v5_gn_4_156821 Lactuca sativa
Lsat_1_v5_gn_4_175521 Lactuca sativa
Lsat_1_v5_gn_5_136420 Lactuca sativa
Lsat_1_v5_gn_6_104800 Lactuca sativa
Lsat_1_v5_gn_6_114920 Lactuca sativa
Lsat_1_v5_gn_9_99241 Lactuca sativa
Manes.02G165900 Manihot esculenta
Manes.12G138800 Manihot esculenta
Manes.13G090600 Manihot esculenta
Mapoly0058s0070 Marchantia polymorpha
MBI02_g19398_MAGBIO Magnolia biondii
MBI03_g28542_MAGBIO Magnolia biondii
MBI05_g00774_MAGBIO Magnolia biondii
MBI06_g04544_MAGBIO Magnolia biondii
MD00G1028700 Malus domestica
MD01G1024000 Malus domestica
MD15G1329300 Malus domestica
MD15G1345100 Malus domestica
Medtr1g029790 Medicago truncatula
Medtr3g087800 Medicago truncatula
Medtr8g091450 Medicago truncatula
Medtr8g091470 Medicago truncatula
MELO3C007781.2 Cucumis melo
MELO3C010499.2 Cucumis melo
Migut.C00082 Erythranthe guttata
Migut.L00097 Erythranthe guttata
Migut.L00298 Erythranthe guttata
MSTRG.25371 Avicennia marina
MSTRG.2548 Avicennia marina
Nitab4.5_0000111g0170 Nicotiana tabacum
Nitab4.5_0000214g0150 Nicotiana tabacum
Nitab4.5_0000322g0070 Nicotiana tabacum
Nitab4.5_0000518g0030 Nicotiana tabacum
Nitab4.5_0004208g0020 Nicotiana tabacum
Nitab4.5_0005296g0010 Nicotiana tabacum
Nitab4.5_0014254g0010 Nicotiana tabacum
Nn1g05256 Nelumbo nucifera
Nn1g08875 Nelumbo nucifera
Nn5g28358 Nelumbo nucifera
Nn5g28999 Nelumbo nucifera
Oeu028395.1 Olea europaea
Oeu037226.1 Olea europaea
Oeu045781.2 Olea europaea
Oeu055287.1 Olea europaea
Os06g0223800 Oryza sativa ssp. japonica
Os11g0183800 Oryza sativa ssp. japonica
Peaxi162Scf00051g01415 Petunia axillaris
Peaxi162Scf00204g00079 Petunia axillaris
Peaxi162Scf00310g00616 Petunia axillaris
PGR004G1902 Punica granatum
PGR042G3490 Punica granatum
PGSC0003DMG400011768 Solanum tuberosum
Phvul.001G072300 Phaseolus vulgaris
Phvul.001G250100 Phaseolus vulgaris
Phvul.002G262600 Phaseolus vulgaris
Potri.005G080100 Populus trichocarpa
Potri.005G180100 Populus trichocarpa
Potri.007G087200 Populus trichocarpa
Pp3c19_16450 Physcomitrium patens
Pp3c19_16600 Physcomitrium patens
Pp3c22_14800 Physcomitrium patens
Prupe.1G493200 Prunus persica
Prupe.6G179000 Prunus persica
Psat0s1342g0080 Pisum sativum
Psat0s2281g0040 Pisum sativum
Psat0s3542g0080 Pisum sativum
Psat0s3732g0160 Pisum sativum
Psat2g031040 Pisum sativum
Psat2g071200 Pisum sativum
Psat3g013480 Pisum sativum
Psat3g174280 Pisum sativum
Psat3g175160 Pisum sativum
Psat4g086040 Pisum sativum
Psat4g086160 Pisum sativum
Psat5g038080 Pisum sativum
Psat5g088440 Pisum sativum
Psat5g139360 Pisum sativum
Psat5g242920 Pisum sativum
Psat6g073800 Pisum sativum
Psat6g083640 Pisum sativum
Psat7g053240 Pisum sativum
Psat7g093600 Pisum sativum
Psat7g142440 Pisum sativum
Psat7g163120 Pisum sativum
Psat7g249320 Pisum sativum
PSO170G3601 Papaver somniferum
PSO447G0334 Papaver somniferum
PSO528G0149 Papaver somniferum
QL06p050515 Quercus lobata
QL09p033882 Quercus lobata
RcHm_v2.0_Chr2g0115531 Rosa chinensis
RcHm_v2.0_Chr6g0296271 Rosa chinensis
Rhsim11G0069800 Rhododendron simsii
Sabra05G0065700 Salix brachista
Sabra05G0136000 Salix brachista
Sabra07G0072100 Salix brachista
SalBow3G0222 Salvia bowleyana
SalBow5G4059 Salvia bowleyana
SalBow5G5615 Salvia bowleyana
SalBow7G1804 Salvia bowleyana
Sc15g0002860 Simmondsia chinensis
Sc15g0002870 Simmondsia chinensis
Sc15g0002890 Simmondsia chinensis
Sc16g0003080 Simmondsia chinensis
Sed0000302 Sechium edule
Sed0006866 Sechium edule
Sed0010090 Sechium edule
SEGI_00330 Sequoiadendron giganteum
SEGI_03949 Sequoiadendron giganteum
SEGI_05363 Sequoiadendron giganteum
SEGI_07944 Sequoiadendron giganteum
SEGI_09323 Sequoiadendron giganteum
SEGI_10495 Sequoiadendron giganteum
SEGI_10650 Sequoiadendron giganteum
SEGI_13822 Sequoiadendron giganteum
SEGI_15326 Sequoiadendron giganteum
SEGI_16000 Sequoiadendron giganteum
SEGI_16718 Sequoiadendron giganteum
SEGI_17295 Sequoiadendron giganteum
SEGI_20395 Sequoiadendron giganteum
SEGI_20800 Sequoiadendron giganteum
SEGI_25201 Sequoiadendron giganteum
SEGI_26220 Sequoiadendron giganteum
SEGI_29359 Sequoiadendron giganteum
SEGI_36631 Sequoiadendron giganteum
SEGI_37431 Sequoiadendron giganteum
SEGI_38358 Sequoiadendron giganteum
SEGI_39017 Sequoiadendron giganteum
SEGI_39832 Sequoiadendron giganteum
SGA_v2.0_scaffold228G43271 Striga asiatica
SGA_v2.0_scaffold2G01318 Striga asiatica
SGA_v2.0_scaffold51G18729 Striga asiatica
SMO118G0402 Selaginella moellendorffii
SMO361G0718 Selaginella moellendorffii
Solyc04g054480.3 Solanum lycopersicum
Solyc06g060160.3 Solanum lycopersicum
Solyc11g017460.3 Solanum lycopersicum
Sopen04g024300 Solanum pennellii
Sopen06g020280 Solanum pennellii
Sopen11g009410 Solanum pennellii
Sp1g33410 Schrenkiella parvula
Sp4g01210 Schrenkiella parvula
Sp5g32620 Schrenkiella parvula
TAR381G0364 Trochodendron aralioides
TAR381G0454 Trochodendron aralioides
TAR625G0058 Trochodendron aralioides
TAR628G0905 Trochodendron aralioides
THA.LOC104800208 Tarenaya hassleriana
THA.LOC104804152 Tarenaya hassleriana
THA.LOC104806830 Tarenaya hassleriana
THA.LOC104807707 Tarenaya hassleriana
THA.LOC104813670 Tarenaya hassleriana
Thecc.01G107700 Theobroma cacao
Thecc.08G128900 Theobroma cacao
Thhalv10000007m.g Eutrema salsugineum
Thhalv10011176m.g Eutrema salsugineum
Thhalv10017994m.g Eutrema salsugineum
TPR.G2197 Trifolium pratense
TPR.G21979 Trifolium pratense
TPR.G22884 Trifolium pratense
TPR.G22888 Trifolium pratense
TWI60G0911 Tripterygium wilfordii
TWI74G0962 Tripterygium wilfordii
TWI77G0447 Tripterygium wilfordii
unitig_736.g22570 Utricularia gibba
unitig_736.g22571 Utricularia gibba
unitig_899.g14544 Utricularia gibba
unitig_899.g14545 Utricularia gibba
vmacro00848 Vaccinium macrocarpon
vmacro12935 Vaccinium macrocarpon
VMungo0251G3591 Vigna mungo
VMungo0331G0351 Vigna mungo
VMungo0647G0788 Vigna mungo
VMungo1080G0002 Vigna mungo
Zm00001eb091240 Zea mays
Zm00001eb279450 Zea mays
Zm00001eb279460 Zea mays
Zm00001eb279470 Zea mays
Zm00001eb279480 Zea mays
Zm00001eb372570 Zea mays

User provided reference genes

Program Settings