Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28700 Brassica napus
A06p01910 Brassica napus
A07p33130 Brassica napus
A09p32280 Brassica napus
Aa31LG2G2830 Aethionema arabicum
Aa31LG6G8340 Aethionema arabicum
Aa31LG9G14970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3862 Anthoceros agrestis
Actinidia01603 Actinidia chinensis
Actinidia10280 Actinidia chinensis
Actinidia28549 Actinidia chinensis
Actinidia28550 Actinidia chinensis
Actinidia28551 Actinidia chinensis
Actinidia33384 Actinidia chinensis
Actinidia33385 Actinidia chinensis
Ah.09g230130 Amaranthus hybridus
AL1G48700 Arabidopsis lyrata
AL2G23730 Arabidopsis lyrata
AL6G43300 Arabidopsis lyrata
AL6G43310 Arabidopsis lyrata
Aqoxy3G01467 Aquilegia oxysepala
Aqoxy3G04111 Aquilegia oxysepala
Aqoxy6G00468 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53H7EE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7FUC5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.85VNG6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CPL9KJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8IAYR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDL5EH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LU72YE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAUQ3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WK1BYW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1C2TJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y6MC50 Arachis hypogaea
AT1G34200 Arabidopsis thaliana
AT1G66130 Arabidopsis thaliana
AT4G09670 Arabidopsis thaliana
ATR0564G388 Amborella trichopoda
Atru.chr12.800 Acer truncatum
Atru.chr13.1947 Acer truncatum
AUR62021336 Chenopodium quinoa
AUR62021337 Chenopodium quinoa
AUR62022317 Chenopodium quinoa
AUR62022318 Chenopodium quinoa
AUR62033251 Chenopodium quinoa
AUR62033252 Chenopodium quinoa
AUR62034375 Chenopodium quinoa
AUR62034376 Chenopodium quinoa
BcaB01g02779 Brassica carinata
BcaB03g15292 Brassica carinata
BcaB03g15293 Brassica carinata
BcaB07g33151 Brassica carinata
BcaC01g04705 Brassica carinata
BcaC08g43384 Brassica carinata
BcaC08g43404 Brassica carinata
BcaC08g43802 Brassica carinata
BcaC08g46078 Brassica carinata
BolC3t15756H Brassica oleracea
BolC3t15781H Brassica oleracea
BolC3t18476H Brassica oleracea
BolC6t35841H Brassica oleracea
BolC6t35860H Brassica oleracea
BolC6t36312H Brassica oleracea
BolC6t39032H Brassica oleracea
BraA03t12069Z Brassica rapa
BraA06t23407Z Brassica rapa
BraA07t30941Z Brassica rapa
BraA09t38771Z Brassica rapa
C03p34710 Brassica napus
C06p07510 Brassica napus
C06p07710 Brassica napus
C06p11790 Brassica napus
C06p39390 Brassica napus
CAN.G1010.5 Capsicum annuum
CAN.G1010.6 Capsicum annuum
CAN.G1010.7 Capsicum annuum
CAN.G1038.7 Capsicum annuum
CAN.G222.165 Capsicum annuum
CANSAT25G3846 Cannabis sativa
CANSAT54G1680 Cannabis sativa
CARHR033710 Cardamine hirsuta
CARHR058100 Cardamine hirsuta
CARHR260610 Cardamine hirsuta
CARHR260620 Cardamine hirsuta
Carub.0001s3234 Capsella rubella
Carub.0002s1210 Capsella rubella
Carub.0006s2812 Capsella rubella
Ca_04517_v3 Cicer arietinum L.
Ca_04643_v3 Cicer arietinum L.
Ca_13189_v3 Cicer arietinum L.
Ca_13190_v3 Cicer arietinum L.
Ca_17079_v3 Cicer arietinum L.
Ca_27057_v3 Cicer arietinum L.
Ca_30344_v3 Cicer arietinum L.
CBR_g27939 Chara braunii
CBR_g34908 Chara braunii
CBR_g8590 Chara braunii
Cc10_g06270 Coffea canephora
Cc10_g06280 Coffea canephora
Cc10_g06290 Coffea canephora
CDE02G3497 Ceratophyllum demersum
CDE05G1070 Ceratophyllum demersum
CDE05G2956 Ceratophyllum demersum
Cfa007775 Carpinus fangiana
Cfa018246 Carpinus fangiana
Cfa026458 Carpinus fangiana
Cfa026886 Carpinus fangiana
Ciclev10001611m.g Citrus clementina
CiPaw.03G075300 Carya illinoinensis
CiPaw.07G109400 Carya illinoinensis
CiPaw.15G010000 Carya illinoinensis
CiPaw.15G010200 Carya illinoinensis
CiPaw.15G010300 Carya illinoinensis
ClCG00G006200 Citrullus lanatus
ClCG02G007650 Citrullus lanatus
ClCG05G010530 Citrullus lanatus
ClCG08G008730 Citrullus lanatus
ClCG08G008740 Citrullus lanatus
ClCG08G008750 Citrullus lanatus
COL.COLO4_08429 Corchorus olitorius
COL.COLO4_08430 Corchorus olitorius
COL.COLO4_13417 Corchorus olitorius
Cpa.g.sc258.9 Carica papaya
Cpa.g.sc26.142 Carica papaya
Cpa.g.sc26.144 Carica papaya
Cre01.g003200 Chlamydomonas reinhardtii
CsaV3_3G017980 Cucumis sativus L.
CsaV3_6G004760 Cucumis sativus L.
CsaV3_6G004770 Cucumis sativus L.
CSS0009621 Camellia sinensis var. sinensis
CSS0010342 Camellia sinensis var. sinensis
CSS0014077 Camellia sinensis var. sinensis
CSS0015924 Camellia sinensis var. sinensis
CSS0022121 Camellia sinensis var. sinensis
CSS0022282 Camellia sinensis var. sinensis
CSS0038483 Camellia sinensis var. sinensis
CSS0038630 Camellia sinensis var. sinensis
CSS0042399 Camellia sinensis var. sinensis
CSS0047826 Camellia sinensis var. sinensis
DCAR_009601 Daucus carota
DCAR_009602 Daucus carota
DCAR_016137 Daucus carota
DCAR_016138 Daucus carota
DCAR_019986 Daucus carota
Dinv28222 Davidia involucrata
Dinv41007 Davidia involucrata
Dinv41008 Davidia involucrata
Dinv41009 Davidia involucrata
Duzib093G0678 Durio zibethinus
Duzib116G0332 Durio zibethinus
Duzib116G0562 Durio zibethinus
Duzib116G0832 Durio zibethinus
Duzib211G0406 Durio zibethinus
Duzib268G0540 Durio zibethinus
ECA238G2394 Erigeron canadensis
ECA247G1749 Erigeron canadensis
ECA247G2467 Erigeron canadensis
ECA247G3999 Erigeron canadensis
EL10Ac1g01739 Beta vulgaris
EL10Ac8g18323 Beta vulgaris
Eucgr.C02126 Eucalyptus grandis
Eucgr.F02655 Eucalyptus grandis
Eucgr.F02656 Eucalyptus grandis
Eucgr.F02894 Eucalyptus grandis
FAN19G0098 Fragaria x ananassa
FAN20G3118 Fragaria x ananassa
FAN23G2778 Fragaria x ananassa
FAN24G1904 Fragaria x ananassa
FAN26G1742 Fragaria x ananassa
FAN27G0157 Fragaria x ananassa
FAN28G1092 Fragaria x ananassa
FvH4_1g28600 Fragaria vesca
FvH4_2g12650 Fragaria vesca
Glyma.02G076500 Glycine max
Glyma.09G159400 Glycine max
Glyma.10G219300 Glycine max
Glyma.11G214100 Glycine max
Glyma.18G042600 Glycine max
Glyma.20G172400 Glycine max
Gohir.1Z049316 Gossypium hirsutum
Gohir.1Z049330 Gossypium hirsutum
Gohir.A05G247640 Gossypium hirsutum
Gohir.A05G271600 Gossypium hirsutum
Gohir.A08G037700 Gossypium hirsutum
Gohir.D05G249300 Gossypium hirsutum
Gohir.D05G273800 Gossypium hirsutum
Gohir.D08G048000 Gossypium hirsutum
Gorai.004G047500 Gossypium raimondii
Gorai.009G260300 Gossypium raimondii
Gorai.009G287000 Gossypium raimondii
GSVIVG01013650001 Vitis vinifera
GSVIVG01013658001 Vitis vinifera
GSVIVG01013661001 Vitis vinifera
HanXRQChr02g0041231 Helianthus annuus
HanXRQChr05g0132531 Helianthus annuus
HanXRQChr07g0192141 Helianthus annuus
HanXRQChr07g0192181 Helianthus annuus
HanXRQChr07g0198381 Helianthus annuus
HanXRQChr12g0372461 Helianthus annuus
HanXRQChr12g0372471 Helianthus annuus
HanXRQChr12g0372491 Helianthus annuus
HanXRQChr12g0372521 Helianthus annuus
HanXRQChr16g0500501 Helianthus annuus
Haze_14297 Corylus avellana
Haze_17853 Corylus avellana
Haze_17854 Corylus avellana
Hma1.2p1_0034F.1_g021230 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134940 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134950 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134960 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134970 Hydrangea macrophylla
HPP92_011257 Vanilla planifolia
HPP92_027713 Vanilla planifolia
Hund17513 Selenicereus undatus
Lalb_Chr14g0369991 Lupinus albus
Lalb_Chr14g0370001 Lupinus albus
Lalb_Chr15g0085061 Lupinus albus
Lalb_Chr19g0129901 Lupinus albus
Lj2g0015226 Lotus japonicus
Lj2g0022377 Lotus japonicus
Lj4A256T36 Lonicera japonica
Lj4A706T80 Lonicera japonica
Lj4C706T10 Lonicera japonica
Lj6g0007520 Lotus japonicus
Lsat_1_v5_gn_1_5440 Lactuca sativa
Lsat_1_v5_gn_1_5460 Lactuca sativa
Lsat_1_v5_gn_2_71401 Lactuca sativa
Manes.02G079500 Manihot esculenta
Manes.02G186900 Manihot esculenta
MBI02_g18921_MAGBIO Magnolia biondii
MBI05_g00330_MAGBIO Magnolia biondii
MBI05_g43696_MAGBIO Magnolia biondii
MD09G1265700 Malus domestica
MD09G1265900 Malus domestica
MD10G1042200 Malus domestica
MD17G1262300 Malus domestica
Medtr1g097250 Medicago truncatula
Medtr3g064900 Medicago truncatula
Medtr6g038310 Medicago truncatula
Medtr6g038350 Medicago truncatula
Medtr6g038370 Medicago truncatula
Medtr6g038390 Medicago truncatula
Medtr6g038640 Medicago truncatula
Medtr6g038650 Medicago truncatula
Medtr6g066230 Medicago truncatula
MELO3C019572.2 Cucumis melo
MELO3C019947.2 Cucumis melo
MELO3C019948.2 Cucumis melo
Migut.C00164 Erythranthe guttata
Migut.H02236 Erythranthe guttata
Migut.N02929 Erythranthe guttata
Migut.O00922 Erythranthe guttata
MSTRG.22124 Avicennia marina
MSTRG.23395 Avicennia marina
MSTRG.24940 Avicennia marina
MSTRG.964 Avicennia marina
Nitab4.5_0000207g0020 Nicotiana tabacum
Nitab4.5_0000433g0140 Nicotiana tabacum
Nitab4.5_0001000g0030 Nicotiana tabacum
Nitab4.5_0001111g0070 Nicotiana tabacum
Nitab4.5_0004045g0010 Nicotiana tabacum
Nitab4.5_0004541g0040 Nicotiana tabacum
Nn4g24495 Nelumbo nucifera
Nn5g28907 Nelumbo nucifera
Oeu009427.1 Olea europaea
Oeu027225.1 Olea europaea
Oeu035394.1 Olea europaea
Oeu057403.1 Olea europaea
Oeu057405.1 Olea europaea
Os10g0403700 Oryza sativa ssp. japonica
Peaxi162Scf00078g01422 Petunia axillaris
Peaxi162Scf00160g01635 Petunia axillaris
Peaxi162Scf00207g00442 Petunia axillaris
Peaxi162Scf00226g00059 Petunia axillaris
Peaxi162Scf00226g00097 Petunia axillaris
Peaxi162Scf00226g00098 Petunia axillaris
Peaxi162Scf00226g00411 Petunia axillaris
PGR004G1195 Punica granatum
PGR042G0422 Punica granatum
PGR042G0661 Punica granatum
PGSC0003DMG400013261 Solanum tuberosum
PGSC0003DMG400016961 Solanum tuberosum
PGSC0003DMG400031148 Solanum tuberosum
Phvul.001G228100 Phaseolus vulgaris
Phvul.004G087200 Phaseolus vulgaris
Phvul.004G087400 Phaseolus vulgaris
Phvul.004G134400 Phaseolus vulgaris
Phvul.007G086100 Phaseolus vulgaris
Potri.005G200200 Populus trichocarpa
Potri.005G200300 Populus trichocarpa
Potri.017G137300 Populus trichocarpa
Pp3c23_6070 Physcomitrium patens
Pp3c6_14500 Physcomitrium patens
Pp3s34_460 Physcomitrium patens
Pp3s46_188 Physcomitrium patens
PRCOL_00000943 Prasinoderma coloniale
Prupe.3G163700 Prunus persica
Prupe.8G046300 Prunus persica
Psat1g109120 Pisum sativum
Psat1g117800 Pisum sativum
Psat5g119200 Pisum sativum
Psat6g189120 Pisum sativum
Psat6g189160 Pisum sativum
PSO063G4016 Papaver somniferum
PSO170G0359 Papaver somniferum
PSO170G2525 Papaver somniferum
PSO210G5754 Papaver somniferum
PSO782G4444 Papaver somniferum
QL02p035517 Quercus lobata
QL02p059850 Quercus lobata
RcHm_v2.0_Chr3g0492491 Rosa chinensis
RcHm_v2.0_Chr6g0273321 Rosa chinensis
Rhsim06G0089400 Rhododendron simsii
Rhsim10G0052200 Rhododendron simsii
Rhsim11G0037100 Rhododendron simsii
Rhsim11G0090100 Rhododendron simsii
Rhsim11G0090200 Rhododendron simsii
Rhsim11G0090300 Rhododendron simsii
Rhsim11G0090400 Rhododendron simsii
Sabra05G0152300 Salix brachista
Sabra17G0111700 Salix brachista
SalBow3G1179 Salvia bowleyana
SalBow6G3169 Salvia bowleyana
SalBow7G1325 Salvia bowleyana
SalBow7G1951 Salvia bowleyana
Sc14g0001420 Simmondsia chinensis
Sc20g0003160 Simmondsia chinensis
Sc20g0003240 Simmondsia chinensis
Sed0006538 Sechium edule
Sed0013239 Sechium edule
Sed0023137 Sechium edule
SEGI_15125 Sequoiadendron giganteum
SEGI_17814 Sequoiadendron giganteum
SEGI_22024 Sequoiadendron giganteum
SEGI_24718 Sequoiadendron giganteum
SEGI_29655 Sequoiadendron giganteum
SGA_v2.0_scaffold82G26211 Striga asiatica
SHI09138 Sapria himalayana
Solyc04g072240.3 Solanum lycopersicum
Solyc11g011820.3 Solanum lycopersicum
Solyc11g011840.2 Solanum lycopersicum
Solyc12g056800.2 Solanum lycopersicum
Sopen04g028420 Solanum pennellii
Sopen11g006660 Solanum pennellii
Sopen11g006670 Solanum pennellii
Sopen12g029480 Solanum pennellii
Sp1g29430 Schrenkiella parvula
Sp5g21180 Schrenkiella parvula
Sp6g07930 Schrenkiella parvula
TAR628G0640 Trochodendron aralioides
TAR629G2354 Trochodendron aralioides
THA.LOC104805651 Tarenaya hassleriana
THA.LOC104806774 Tarenaya hassleriana
THA.LOC104813093 Tarenaya hassleriana
Thecc.04G053500 Theobroma cacao
Thecc.08G197100 Theobroma cacao
Thhalv10008044m.g Eutrema salsugineum
Thhalv10018750m.g Eutrema salsugineum
Thhalv10018755m.g Eutrema salsugineum
Thhalv10028757m.g Eutrema salsugineum
TPR.G16192 Trifolium pratense
TPR.G16207 Trifolium pratense
TPR.G23157 Trifolium pratense
TPR.G26697 Trifolium pratense
TPR.G573 Trifolium pratense
TPR.G8854 Trifolium pratense
TWI53G0147 Tripterygium wilfordii
TWI60G0721 Tripterygium wilfordii
TWI60G1040 Tripterygium wilfordii
unitig_22.g5610 Utricularia gibba
vmacro01513 Vaccinium macrocarpon
vmacro01514 Vaccinium macrocarpon
vmacro01515 Vaccinium macrocarpon
vmacro01516 Vaccinium macrocarpon
vmacro09157 Vaccinium macrocarpon
vmacro21203 Vaccinium macrocarpon
VMungo0464G0032 Vigna mungo
VMungo0464G0916 Vigna mungo
VMungo0464G0960 Vigna mungo
VMungo0464G2115 Vigna mungo
VMungo0720G1768 Vigna mungo
VMungo1383G2044 Vigna mungo
Zm00001eb048510 Zea mays
Zm00001eb223330 Zea mays

User provided reference genes

Program Settings