Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13880 Brassica napus
A02p14880 Brassica napus
A03p40610 Brassica napus
A05p31340 Brassica napus
A06p04200 Brassica napus
A07p32040 Brassica napus
A07p34740 Brassica napus
Aa31LG10G4790 Aethionema arabicum
Aa31LG2G3450 Aethionema arabicum
Aa31LG8G5170 Aethionema arabicum
Actinidia02674 Actinidia chinensis
Actinidia16666 Actinidia chinensis
Actinidia38374 Actinidia chinensis
Ah.03g138240 Amaranthus hybridus
Ah.10g037730 Amaranthus hybridus
Ah.16g101710 Amaranthus hybridus
AL1G55500 Arabidopsis lyrata
AL2G25390 Arabidopsis lyrata
AL2G27170 Arabidopsis lyrata
AL3G31550 Arabidopsis lyrata
Aqoxy3G00255 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33FPJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CT7QXP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9TLRY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YVY8FL Arachis hypogaea
AT1G48780 Arabidopsis thaliana
AT1G67050 Arabidopsis thaliana
AT1G68330 Arabidopsis thaliana
AT3G18300 Arabidopsis thaliana
ATR1125G041 Amborella trichopoda
Atru.chr1.1666 Acer truncatum
Atru.chr11.146 Acer truncatum
Atru.chr3.271 Acer truncatum
Atru.chr3.272 Acer truncatum
Atru.chr9.2365 Acer truncatum
Atru.chr9.868 Acer truncatum
AUR62029894 Chenopodium quinoa
AUR62033812 Chenopodium quinoa
AUR62037315 Chenopodium quinoa
BcaB03g15410 Brassica carinata
BcaB03g15818 Brassica carinata
BcaB05g24231 Brassica carinata
BcaB05g24364 Brassica carinata
BcaB07g33718 Brassica carinata
BcaC01g03702 Brassica carinata
BcaC03g14789 Brassica carinata
BcaC03g14937 Brassica carinata
BcaC05g28684 Brassica carinata
BcaC08g43079 Brassica carinata
BcaC08g45979 Brassica carinata
BolC2t08390H Brassica oleracea
BolC2t08547H Brassica oleracea
BolC3t17238H Brassica oleracea
BolC5t33473H Brassica oleracea
BolC5t33530H Brassica oleracea
BolC5t33531H Brassica oleracea
BolC6t35478H Brassica oleracea
BolC6t38872H Brassica oleracea
BolC6t39259H Brassica oleracea
BolSC97t61276H Brassica oleracea
BolSC97t61277H Brassica oleracea
BraA02t06449Z Brassica rapa
BraA02t06555Z Brassica rapa
BraA03t13219Z Brassica rapa
BraA05t21972Z Brassica rapa
BraA06t23625Z Brassica rapa
BraA07t30834Z Brassica rapa
BraA07t31092Z Brassica rapa
C02p22380 Brassica napus
C02p24390 Brassica napus
C03p49410 Brassica napus
C05p47640 Brassica napus
C06p03380 Brassica napus
C06p37700 Brassica napus
C06p41670 Brassica napus
CAN.G1425.20 Capsicum annuum
CAN.G610.64 Capsicum annuum
CANSAT78G1410 Cannabis sativa
CANSAT80G1461 Cannabis sativa
CARHR038750 Cardamine hirsuta
CARHR059460 Cardamine hirsuta
CARHR061040 Cardamine hirsuta
CARHR093670 Cardamine hirsuta
Carub.0001s3793 Capsella rubella
Carub.0002s1334 Capsella rubella
Carub.0002s1483 Capsella rubella
Carub.0003s1809 Capsella rubella
Ca_08076_v3 Cicer arietinum L.
Ca_11157_v3 Cicer arietinum L.
Ca_13728_v3 Cicer arietinum L.
Cc04_g07030 Coffea canephora
Cc07_g08750 Coffea canephora
Cc11_g09960 Coffea canephora
CDE08G0405 Ceratophyllum demersum
Cfa019751 Carpinus fangiana
Cfa023327 Carpinus fangiana
Ciclev10012557m.g Citrus clementina
Ciclev10017573m.g Citrus clementina
Ciclev10023387m.g Citrus clementina
CiPaw.03G062600 Carya illinoinensis
CiPaw.04G042800 Carya illinoinensis
CiPaw.05G239500 Carya illinoinensis
CiPaw.06G018600 Carya illinoinensis
CiPaw.15G132000 Carya illinoinensis
CiPaw.16G087900 Carya illinoinensis
ClCG04G011030 Citrullus lanatus
ClCG05G014270 Citrullus lanatus
ClCG06G014700 Citrullus lanatus
ClCG08G004940 Citrullus lanatus
ClCG11G007860 Citrullus lanatus
COL.COLO4_04903 Corchorus olitorius
COL.COLO4_09345 Corchorus olitorius
COL.COLO4_09346 Corchorus olitorius
COL.COLO4_33492 Corchorus olitorius
Cpa.g.sc170.59 Carica papaya
Cpa.g.sc170.65 Carica papaya
Cpa.g.sc3.490 Carica papaya
CsaV3_1G003950 Cucumis sativus L.
CsaV3_2G033730 Cucumis sativus L.
CsaV3_6G003260 Cucumis sativus L.
DCAR_011359 Daucus carota
DCAR_017187 Daucus carota
DCAR_023211 Daucus carota
DCAR_023647 Daucus carota
DCAR_025911 Daucus carota
DCAR_030169 Daucus carota
Dinv21060 Davidia involucrata
Dinv26380 Davidia involucrata
Dinv31621 Davidia involucrata
Dinv33952 Davidia involucrata
Dinv34817 Davidia involucrata
Duzib068G0299 Durio zibethinus
Duzib084G0144 Durio zibethinus
Duzib138G0828 Durio zibethinus
Duzib138G1193 Durio zibethinus
Duzib205G1654 Durio zibethinus
Duzib211G0678 Durio zibethinus
Duzib251G0547 Durio zibethinus
Duzib268G0315 Durio zibethinus
EL10Ac2g04558 Beta vulgaris
EL10Ac5g11468 Beta vulgaris
EL10Ac6g14360 Beta vulgaris
Eucgr.B00740 Eucalyptus grandis
Eucgr.C02676 Eucalyptus grandis
Eucgr.C02692 Eucalyptus grandis
Eucgr.F02503 Eucalyptus grandis
Eucgr.G02309 Eucalyptus grandis
Eucgr.J01503 Eucalyptus grandis
Eucgr.K02230 Eucalyptus grandis
FAN04G1311 Fragaria x ananassa
FAN07G0615 Fragaria x ananassa
FAN08G0561 Fragaria x ananassa
FAN12G0834 Fragaria x ananassa
FAN12G2223 Fragaria x ananassa
FAN13G0049 Fragaria x ananassa
FAN17G0119 Fragaria x ananassa
FAN18G2726 Fragaria x ananassa
FAN18G2846 Fragaria x ananassa
FAN22G0009 Fragaria x ananassa
FvH4_4g27060 Fragaria vesca
FvH4_5g11870 Fragaria vesca
Glyma.05G237700 Glycine max
Glyma.06G147200 Glycine max
Glyma.07G093400 Glycine max
Glyma.08G044800 Glycine max
Glyma.08G366400 Glycine max
Glyma.09G183000 Glycine max
Glyma.10G272700 Glycine max
Glyma.13G045300 Glycine max
Glyma.18G295900 Glycine max
Glyma.19G049800 Glycine max
Glyma.20G117200 Glycine max
Gohir.A01G185900 Gossypium hirsutum
Gohir.A07G072100 Gossypium hirsutum
Gohir.A09G115275 Gossypium hirsutum
Gohir.A12G266800 Gossypium hirsutum
Gohir.D01G176500 Gossypium hirsutum
Gohir.D07G076300 Gossypium hirsutum
Gohir.D09G111966 Gossypium hirsutum
Gohir.D12G267200 Gossypium hirsutum
Gorai.001G081000 Gossypium raimondii
Gorai.002G218800 Gossypium raimondii
Gorai.006G129800 Gossypium raimondii
Gorai.008G287200 Gossypium raimondii
GSVIVG01008315001 Vitis vinifera
HanXRQChr08g0213621 Helianthus annuus
HanXRQChr11g0325381 Helianthus annuus
HanXRQChr11g0330641 Helianthus annuus
HanXRQChr12g0375791 Helianthus annuus
Haze_00621 Corylus avellana
Haze_14165 Corylus avellana
Haze_18700 Corylus avellana
Hma1.2p1_0075F.1_g039340 Hydrangea macrophylla
Hma1.2p1_0653F.1_g196170 Hydrangea macrophylla
Hma1.2p1_1109F.1_g258100 Hydrangea macrophylla
Hma1.2p1_1875F.1_g306280 Hydrangea macrophylla
Lalb_Chr05g0222411 Lupinus albus
Lalb_Chr06g0165991 Lupinus albus
Lalb_Chr09g0331061 Lupinus albus
Lalb_Chr10g0091301 Lupinus albus
Lalb_Chr14g0371071 Lupinus albus
Lalb_Chr21g0308831 Lupinus albus
Lalb_Chr21g0317791 Lupinus albus
Lj1g0002100 Lotus japonicus
Lj2A441T54 Lonicera japonica
Lj2g0005250 Lotus japonicus
Lj2g0020813 Lotus japonicus
Lj5g0008137 Lotus japonicus
Lj5g0020104 Lotus japonicus
Lj6P755T13 Lonicera japonica
Lj9C425T13 Lonicera japonica
Lsat_1_v5_gn_3_79441 Lactuca sativa
Lsat_1_v5_gn_4_154601 Lactuca sativa
Lsat_1_v5_gn_4_16321 Lactuca sativa
Lsat_1_v5_gn_8_144221 Lactuca sativa
Lsat_1_v5_gn_8_40701 Lactuca sativa
Manes.01G013800 Manihot esculenta
Manes.01G111000 Manihot esculenta
Manes.01G111100 Manihot esculenta
Manes.02G069500 Manihot esculenta
Manes.05G114800 Manihot esculenta
Manes.06G066400 Manihot esculenta
Manes.14G104500 Manihot esculenta
MBI09_g39172_MAGBIO Magnolia biondii
MBI16_g05563_MAGBIO Magnolia biondii
MD06G1217800 Malus domestica
MD09G1253400 Malus domestica
MD13G1039600 Malus domestica
MD14G1228000 Malus domestica
MD16G1040500 Malus domestica
MD17G1245300 Malus domestica
Medtr1g110410 Medicago truncatula
Medtr6g018690 Medicago truncatula
Medtr6g083930 Medicago truncatula
Medtr7g082180 Medicago truncatula
Medtr8g104290 Medicago truncatula
MELO3C002094.2 Cucumis melo
MELO3C008143.2 Cucumis melo
MELO3C011526.2 Cucumis melo
MELO3C017318.2 Cucumis melo
Migut.E00357 Erythranthe guttata
Migut.H00223 Erythranthe guttata
Migut.L00326 Erythranthe guttata
MSTRG.13544 Avicennia marina
MSTRG.15300 Avicennia marina
MSTRG.2227 Avicennia marina
MSTRG.23579 Avicennia marina
MSTRG.851 Avicennia marina
Nitab4.5_0000208g0320 Nicotiana tabacum
Nitab4.5_0000912g0150 Nicotiana tabacum
Nitab4.5_0000965g0100 Nicotiana tabacum
Nitab4.5_0001616g0040 Nicotiana tabacum
Nitab4.5_0002661g0140 Nicotiana tabacum
Nitab4.5_0002906g0110 Nicotiana tabacum
Nitab4.5_0003867g0070 Nicotiana tabacum
Nitab4.5_0004416g0110 Nicotiana tabacum
Nitab4.5_0005631g0010 Nicotiana tabacum
Nn3g17892 Nelumbo nucifera
Oeu013419.1 Olea europaea
Oeu016625.1 Olea europaea
Oeu039733.1 Olea europaea
Oeu049583.1 Olea europaea
Oeu050376.1 Olea europaea
Oeu059017.1 Olea europaea
Oeu059495.1 Olea europaea
Peaxi162Scf00394g00072 Petunia axillaris
Peaxi162Scf00634g00035 Petunia axillaris
Peaxi162Scf00683g00031 Petunia axillaris
Peaxi162Scf00753g00337 Petunia axillaris
Peaxi162Scf01445g00123 Petunia axillaris
PGR004G0146 Punica granatum
PGR042G3338 Punica granatum
PGR044G2721 Punica granatum
PGR083G0270 Punica granatum
PGR119G1484 Punica granatum
PGSC0003DMG400005386 Solanum tuberosum
PGSC0003DMG400005644 Solanum tuberosum
PGSC0003DMG400010416 Solanum tuberosum
PGSC0003DMG400014551 Solanum tuberosum
PGSC0003DMG400026404 Solanum tuberosum
Phvul.002G317600 Phaseolus vulgaris
Phvul.003G044800 Phaseolus vulgaris
Phvul.004G065200 Phaseolus vulgaris
Phvul.004G156066 Phaseolus vulgaris
Phvul.007G029000 Phaseolus vulgaris
Phvul.008G006900 Phaseolus vulgaris
Potri.004G098501 Populus trichocarpa
Potri.004G098700 Populus trichocarpa
Potri.008G122300 Populus trichocarpa
Potri.010G122800 Populus trichocarpa
Potri.012G055300 Populus trichocarpa
Potri.015G045700 Populus trichocarpa
Potri.017G115700 Populus trichocarpa
Potri.017G115801 Populus trichocarpa
Prupe.1G313600 Prunus persica
Prupe.3G143400 Prunus persica
Prupe.5G223000 Prunus persica
Psat1g036920 Pisum sativum
Psat1g081160 Pisum sativum
Psat3g098320 Pisum sativum
Psat6g226000 Pisum sativum
Psat7g008400 Pisum sativum
PSO063G0950 Papaver somniferum
PSO170G5495 Papaver somniferum
QL01p040776 Quercus lobata
QL02p051060 Quercus lobata
QL02p051064 Quercus lobata
QL10p025706 Quercus lobata
QL12p016575 Quercus lobata
QL12p016580 Quercus lobata
RcHm_v2.0_Chr4g0434861 Rosa chinensis
RcHm_v2.0_Chr7g0185721 Rosa chinensis
Rhsim08G0082600 Rhododendron simsii
Rhsim10G0068100 Rhododendron simsii
Rhsim12G0085400 Rhododendron simsii
Sabra04G0081100 Salix brachista
Sabra08G0092900 Salix brachista
Sabra10G0092900 Salix brachista
Sabra12G0039000 Salix brachista
Sabra15G0039800 Salix brachista
Sabra17G0095900 Salix brachista
SalBow5G3454 Salvia bowleyana
Sc04g0003440 Simmondsia chinensis
Sc04g0006210 Simmondsia chinensis
Sc10g0001100 Simmondsia chinensis
Sed0006881 Sechium edule
Sed0009603 Sechium edule
Sed0012748 Sechium edule
Sed0014288 Sechium edule
Sed0020630 Sechium edule
Sed0022683 Sechium edule
SGA_v2.0_scaffold115G32107 Striga asiatica
SGA_v2.0_scaffold170G38778 Striga asiatica
Solyc02g063230.1 Solanum lycopersicum
Solyc03g119320.1 Solanum lycopersicum
Solyc05g009210.2 Solanum lycopersicum
Solyc12g036440.1 Solanum lycopersicum
Sopen02g014300 Solanum pennellii
Sopen02g030810 Solanum pennellii
Sopen05g004930 Solanum pennellii
Sopen12g016950 Solanum pennellii
Sp1g35700 Schrenkiella parvula
Sp3g16440 Schrenkiella parvula
Sp5g23390 Schrenkiella parvula
SpUn0149_0010 Schrenkiella parvula
SpUn0173_0010 Schrenkiella parvula
TAR374G1495 Trochodendron aralioides
TAR622G0857 Trochodendron aralioides
TAR629G2615 Trochodendron aralioides
THA.LOC104808345 Tarenaya hassleriana
THA.LOC104820385 Tarenaya hassleriana
THA.LOC104821916 Tarenaya hassleriana
THA.LOC104823858 Tarenaya hassleriana
Thecc.02G225800 Theobroma cacao
Thecc.03G037400 Theobroma cacao
Thecc.04G132500 Theobroma cacao
Thecc.04G132600 Theobroma cacao
Thhalv10012350m.g Eutrema salsugineum
Thhalv10019003m.g Eutrema salsugineum
Thhalv10019574m.g Eutrema salsugineum
Thhalv10021275m.g Eutrema salsugineum
TPR.G15370 Trifolium pratense
TPR.G29083 Trifolium pratense
TPR.G32463 Trifolium pratense
TPR.G39907 Trifolium pratense
TPR.G4850 Trifolium pratense
TWI15G0505 Tripterygium wilfordii
TWI74G0634 Tripterygium wilfordii
TWI77G0657 Tripterygium wilfordii
TWI79G0321 Tripterygium wilfordii
TWI81G0065 Tripterygium wilfordii
unitig_32.g10651 Utricularia gibba
unitig_32.g11887 Utricularia gibba
unitig_748.g8748 Utricularia gibba
unitig_88.g27803 Utricularia gibba
vmacro17706 Vaccinium macrocarpon
vmacro18073 Vaccinium macrocarpon
VMungo0251G1266 Vigna mungo
VMungo0464G0404 Vigna mungo
VMungo0464G2073 Vigna mungo
VMungo0720G1057 Vigna mungo
VMungo0720G1852 Vigna mungo
VMungo0720G2110 Vigna mungo
VMungo1383G1604 Vigna mungo

User provided reference genes

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