Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33630 Brassica napus
A04p25770 Brassica napus
A05p12080 Brassica napus
A05p27380 Brassica napus
A06p02260 Brassica napus
A06p17410 Brassica napus
A07p15160 Brassica napus
Aa31LG4G7020 Aethionema arabicum
Aa31LG5G3820 Aethionema arabicum
Aa31LG7G5360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2247 Anthoceros agrestis
Actinidia10668 Actinidia chinensis
Actinidia15153 Actinidia chinensis
Actinidia20818 Actinidia chinensis
Actinidia30149 Actinidia chinensis
Actinidia35797 Actinidia chinensis
Actinidia37527 Actinidia chinensis
Ah.05g167600 Amaranthus hybridus
AL1G34460 Arabidopsis lyrata
AL3G35290 Arabidopsis lyrata
AL4G29140 Arabidopsis lyrata
Aqoxy2G03694 Aquilegia oxysepala
Aqoxy5G02214 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.02UU0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.23KKED Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1XTPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ET3TLD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FW0EPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GB97J6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MZ8Q1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1GQBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC0U7Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VCZ4QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTC06L Arachis hypogaea
AT1G21360 Arabidopsis thaliana
AT2G33470 Arabidopsis thaliana
AT3G21260 Arabidopsis thaliana
ATR0736G094 Amborella trichopoda
ATR1136G188 Amborella trichopoda
Atru.chr13.2264 Acer truncatum
Atru.chr4.2020 Acer truncatum
AUR62002159 Chenopodium quinoa
AUR62008750 Chenopodium quinoa
AUR62013506 Chenopodium quinoa
AUR62013507 Chenopodium quinoa
AUR62025488 Chenopodium quinoa
AUR62026765 Chenopodium quinoa
AUR62026766 Chenopodium quinoa
AUR62044471 Chenopodium quinoa
BcaB02g10566 Brassica carinata
BcaB03g14270 Brassica carinata
BcaB04g20598 Brassica carinata
BcaB05g23714 Brassica carinata
BcaB06g26213 Brassica carinata
BcaB06g28691 Brassica carinata
BcaB07g32124 Brassica carinata
BcaC02g07819 Brassica carinata
BcaC02g11433 Brassica carinata
BcaC05g26043 Brassica carinata
BcaC05g28188 Brassica carinata
BcaC06g34866 Brassica carinata
BcaC08g43335 Brassica carinata
BcaC09g49064 Brassica carinata
BolC1t04248H Brassica oleracea
BolC4t23132H Brassica oleracea
BolC4t27777H Brassica oleracea
BolC5t30718H Brassica oleracea
BolC5t32962H Brassica oleracea
BolC6t35795H Brassica oleracea
BolC7t42773H Brassica oleracea
BraA01t03475Z Brassica rapa
BraA04t18080Z Brassica rapa
BraA05t20151Z Brassica rapa
BraA05t21632Z Brassica rapa
BraA06t24838Z Brassica rapa
BraA07t29256Z Brassica rapa
C01p43000 Brassica napus
C04p15640 Brassica napus
C04p63000 Brassica napus
C05p20250 Brassica napus
C05p42340 Brassica napus
C07p22230 Brassica napus
CAN.G220.14 Capsicum annuum
CAN.G744.2 Capsicum annuum
CAN.G771.35 Capsicum annuum
CANSAT01G0817 Cannabis sativa
CANSAT25G1615 Cannabis sativa
CANSAT25G3616 Cannabis sativa
CANSAT25G3860 Cannabis sativa
CARHR021750 Cardamine hirsuta
CARHR097160 Cardamine hirsuta
CARHR127480 Cardamine hirsuta
Carub.0001s2077 Capsella rubella
Carub.0003s2124 Capsella rubella
Carub.0004s1510 Capsella rubella
Ca_09852_v3 Cicer arietinum L.
Ca_12145_v3 Cicer arietinum L.
Ca_16659_v3 Cicer arietinum L.
Ca_30193_v3 Cicer arietinum L.
CBR_g5664 Chara braunii
Cc01_g18090 Coffea canephora
Cc03_g05730 Coffea canephora
Cc03_g05740 Coffea canephora
Cc10_g14230 Coffea canephora
CDE04G2052 Ceratophyllum demersum
Cfa014725 Carpinus fangiana
Cfa014726 Carpinus fangiana
Cfa018350 Carpinus fangiana
Cfa027323 Carpinus fangiana
Ciclev10003847m.g Citrus clementina
Ciclev10005918m.g Citrus clementina
CiPaw.01G182100 Carya illinoinensis
CiPaw.02G110400 Carya illinoinensis
CiPaw.15G020700 Carya illinoinensis
CiPaw.16G016800 Carya illinoinensis
ClCG05G004230 Citrullus lanatus
ClCG08G006510 Citrullus lanatus
COL.COLO4_15912 Corchorus olitorius
COL.COLO4_30248 Corchorus olitorius
COL.COLO4_34391 Corchorus olitorius
Cpa.g.sc380.3 Carica papaya
Cpa.g.sc49.51 Carica papaya
Cre12.g519450 Chlamydomonas reinhardtii
CsaV3_3G011960 Cucumis sativus L.
CsaV3_6G030920 Cucumis sativus L.
CsaV3_7G024860 Cucumis sativus L.
CSS0018172 Camellia sinensis var. sinensis
CSS0023290 Camellia sinensis var. sinensis
CSS0023540 Camellia sinensis var. sinensis
CSS0026063 Camellia sinensis var. sinensis
CSS0028672 Camellia sinensis var. sinensis
CSS0043301 Camellia sinensis var. sinensis
DCAR_012561 Daucus carota
DCAR_014414 Daucus carota
DCAR_030752 Daucus carota
Dinv22385 Davidia involucrata
Dinv25819 Davidia involucrata
Dinv27068 Davidia involucrata
Dinv34648 Davidia involucrata
Dinv41115 Davidia involucrata
Duzib041G0773 Durio zibethinus
Duzib052G0434 Durio zibethinus
Duzib093G0817 Durio zibethinus
Duzib116G0760 Durio zibethinus
Duzib151G0441 Durio zibethinus
ECA247G1866 Erigeron canadensis
ECA248G0118 Erigeron canadensis
ECA248G2136 Erigeron canadensis
EL10Ac1g01480 Beta vulgaris
EL10Ac1g01482 Beta vulgaris
EL10Ac3g04986 Beta vulgaris
EL10Ac7g17618 Beta vulgaris
Eucgr.F02730 Eucalyptus grandis
Eucgr.H00145 Eucalyptus grandis
Eucgr.H03025 Eucalyptus grandis
FAN12G1184 Fragaria x ananassa
FAN15G1442 Fragaria x ananassa
FAN17G1585 Fragaria x ananassa
FAN20G1807 Fragaria x ananassa
FAN22G1803 Fragaria x ananassa
FAN24G0222 Fragaria x ananassa
FvH4_2g14560 Fragaria vesca
FvH4_4g03970 Fragaria vesca
Glyma.02G004000 Glycine max
Glyma.04G239900 Glycine max
Glyma.06G124000 Glycine max
Glyma.06G239800 Glycine max
Glyma.10G004400 Glycine max
Glyma.10G182600 Glycine max
Glyma.13G039200 Glycine max
Glyma.14G123200 Glycine max
Glyma.16G114300 Glycine max
Glyma.20G207400 Glycine max
Gohir.A02G040200 Gossypium hirsutum
Gohir.A05G242000 Gossypium hirsutum
Gohir.A10G109800 Gossypium hirsutum
Gohir.D02G046300 Gossypium hirsutum
Gohir.D05G243300 Gossypium hirsutum
Gohir.D10G156000 Gossypium hirsutum
Gorai.005G051100 Gossypium raimondii
Gorai.009G252600 Gossypium raimondii
Gorai.011G176400 Gossypium raimondii
GSVIVG01010050001 Vitis vinifera
GSVIVG01027847001 Vitis vinifera
HanXRQChr01g0023171 Helianthus annuus
HanXRQChr08g0217641 Helianthus annuus
HanXRQChr10g0305291 Helianthus annuus
HanXRQChr11g0336831 Helianthus annuus
Haze_11408 Corylus avellana
Haze_11409 Corylus avellana
Haze_17720 Corylus avellana
Hma1.2p1_0112F.1_g054250 Hydrangea macrophylla
HPP92_004475 Vanilla planifolia
HPP92_004481 Vanilla planifolia
HPP92_005133 Vanilla planifolia
HPP92_024407 Vanilla planifolia
Hund03053 Selenicereus undatus
Hund11905 Selenicereus undatus
Hund26717 Selenicereus undatus
Lalb_Chr02g0150251 Lupinus albus
Lalb_Chr04g0263661 Lupinus albus
Lalb_Chr06g0169191 Lupinus albus
Lalb_Chr08g0240731 Lupinus albus
Lalb_Chr21g0312131 Lupinus albus
Lalb_Chr23g0271391 Lupinus albus
Lalb_Chr25g0289871 Lupinus albus
Lj1g0012617 Lotus japonicus
Lj1g0015315 Lotus japonicus
Lj1g0021813 Lotus japonicus
Lj2A1147G72 Lonicera japonica
Lj3A687T21 Lonicera japonica
Lj3A690T36 Lonicera japonica
Lj4C692T12 Lonicera japonica
Lj5g0025799 Lotus japonicus
Lj7A366G81 Lonicera japonica
Lsat_1_v5_gn_1_74741 Lactuca sativa
Lsat_1_v5_gn_1_8940 Lactuca sativa
Lsat_1_v5_gn_5_182741 Lactuca sativa
Manes.02G176100 Manihot esculenta
Manes.03G162700 Manihot esculenta
Manes.15G042800 Manihot esculenta
Mapoly0022s0179 Marchantia polymorpha
Mapoly0109s0041 Marchantia polymorpha
MBI07_g31090_MAGBIO Magnolia biondii
MBI10_g13797_MAGBIO Magnolia biondii
MCO15G522 Micromonas commoda
MD00G1200100 Malus domestica
MD03G1108400 Malus domestica
MD05G1017200 Malus domestica
MD05G1193600 Malus domestica
MD05G1300600 Malus domestica
MD05G1302000 Malus domestica
MD10G1017400 Malus domestica
MD10G1180300 Malus domestica
MD16G1221400 Malus domestica
Medtr1g028960 Medicago truncatula
Medtr1g028970 Medicago truncatula
Medtr1g041495 Medicago truncatula
Medtr1g075700 Medicago truncatula
Medtr1g075710 Medicago truncatula
Medtr3g090530 Medicago truncatula
MELO3C006409.2 Cucumis melo
MELO3C008403.2 Cucumis melo
MELO3C023696.2 Cucumis melo
Migut.C01031 Erythranthe guttata
Migut.D00449 Erythranthe guttata
Migut.G00504 Erythranthe guttata
MSTRG.18335 Avicennia marina
MSTRG.22377 Avicennia marina
MSTRG.25327 Avicennia marina
Nitab4.5_0000044g0500 Nicotiana tabacum
Nitab4.5_0000299g0210 Nicotiana tabacum
Nitab4.5_0000427g0010 Nicotiana tabacum
Nitab4.5_0000596g0080 Nicotiana tabacum
Nitab4.5_0000917g0110 Nicotiana tabacum
Nitab4.5_0001919g0080 Nicotiana tabacum
Nn1g02882 Nelumbo nucifera
Nn1g06189 Nelumbo nucifera
Nn3g19707 Nelumbo nucifera
Nn5g28653 Nelumbo nucifera
Oeu039677.1 Olea europaea
Oeu039678.1 Olea europaea
Oeu051256.1 Olea europaea
Oeu058819.1 Olea europaea
Oeu058821.1 Olea europaea
Oeu059410.1 Olea europaea
Os02g0622400 Oryza sativa ssp. japonica
Os04g0438600 Oryza sativa ssp. japonica
Os07g0445800 Oryza sativa ssp. japonica
Os08g0108700 Oryza sativa ssp. japonica
Peaxi162Scf00013g01234 Petunia axillaris
Peaxi162Scf00263g00523 Petunia axillaris
Peaxi162Scf00392g00735 Petunia axillaris
PGR002G0004 Punica granatum
PGR004G2242 Punica granatum
PGR044G0652 Punica granatum
PGSC0003DMG400017213 Solanum tuberosum
PGSC0003DMG400024796 Solanum tuberosum
PGSC0003DMG400024797 Solanum tuberosum
PGSC0003DMG401020076 Solanum tuberosum
Phvul.001G072800 Phaseolus vulgaris
Phvul.008G251900 Phaseolus vulgaris
Phvul.009G136000 Phaseolus vulgaris
Phvul.010G068692 Phaseolus vulgaris
Potri.002G035600 Populus trichocarpa
Potri.002G071100 Populus trichocarpa
Potri.005G188600 Populus trichocarpa
Potri.008G168800 Populus trichocarpa
Potri.010G069600 Populus trichocarpa
Pp3c17_13810 Physcomitrium patens
PRCOL_00005704 Prasinoderma coloniale
Prupe.1G041700 Prunus persica
Prupe.8G021000 Prunus persica
Prupe.8G220300 Prunus persica
Psat0s4866g0040 Pisum sativum
Psat1g110600 Pisum sativum
Psat3g056080 Pisum sativum
Psat5g080280 Pisum sativum
Psat6g104320 Pisum sativum
Psat6g117800 Pisum sativum
PSO017G3373 Papaver somniferum
PSO063G3573 Papaver somniferum
PSO384G4832 Papaver somniferum
PSO541G4526 Papaver somniferum
PSO675G3139 Papaver somniferum
QL02p024981 Quercus lobata
QL06p018685 Quercus lobata
RcHm_v2.0_Chr4g0394201 Rosa chinensis
RcHm_v2.0_Chr6g0276911 Rosa chinensis
RcHm_v2.0_Chr6g0287551 Rosa chinensis
Rhsim04G0176600 Rhododendron simsii
Rhsim13G0037000 Rhododendron simsii
Sabra02G0028800 Salix brachista
Sabra02G0055800 Salix brachista
Sabra05G0144000 Salix brachista
Sabra08G0128700 Salix brachista
Sabra10G0037500 Salix brachista
SalBow3G4405 Salvia bowleyana
SalBow4G1067 Salvia bowleyana
SalBow7G2332 Salvia bowleyana
Sc02g0004360 Simmondsia chinensis
Sc13g0005830 Simmondsia chinensis
Sc17g0002910 Simmondsia chinensis
Sed0000596 Sechium edule
Sed0009103 Sechium edule
Sed0021233 Sechium edule
Sed0022089 Sechium edule
Sed0022262 Sechium edule
SEGI_06417 Sequoiadendron giganteum
SEGI_25083 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35205 Striga asiatica
SGA_v2.0_scaffold48G17951 Striga asiatica
SGA_v2.0_scaffold67G22723 Striga asiatica
SMO116G0358 Selaginella moellendorffii
Solyc04g064920.4 Solanum lycopersicum
Solyc06g083810.3 Solanum lycopersicum
Solyc09g090310.3 Solanum lycopersicum
Sopen04g026860 Solanum pennellii
Sopen06g035220 Solanum pennellii
Sopen09g033210 Solanum pennellii
Sp1g18910 Schrenkiella parvula
Sp3g19290 Schrenkiella parvula
Sp4g15810 Schrenkiella parvula
TAR362G1197 Trochodendron aralioides
TAR365G1122 Trochodendron aralioides
TAR626G0304 Trochodendron aralioides
TAR628G0749 Trochodendron aralioides
TAR633G0122 Trochodendron aralioides
TAR633G1243 Trochodendron aralioides
TAR633G2574 Trochodendron aralioides
TAR636G2720 Trochodendron aralioides
THA.LOC104801078 Tarenaya hassleriana
THA.LOC104813699 Tarenaya hassleriana
THA.LOC104813700 Tarenaya hassleriana
THA.LOC104815995 Tarenaya hassleriana
THA.LOC104826089 Tarenaya hassleriana
Thecc.04G258500 Theobroma cacao
Thecc.08G146000 Theobroma cacao
Thhalv10008571m.g Eutrema salsugineum
Thhalv10017251m.g Eutrema salsugineum
Thhalv10021443m.g Eutrema salsugineum
TPR.G10068 Trifolium pratense
TPR.G18756 Trifolium pratense
TPR.G25152 Trifolium pratense
TPR.G27437 Trifolium pratense
TPR.G36041 Trifolium pratense
TPR.G7245 Trifolium pratense
TWI09G0275 Tripterygium wilfordii
TWI34G0235 Tripterygium wilfordii
TWI60G1524 Tripterygium wilfordii
TWI73G0158 Tripterygium wilfordii
unitig_22.g5452 Utricularia gibba
unitig_32.g11272 Utricularia gibba
unitig_60.g25744 Utricularia gibba
unitig_748.g7331 Utricularia gibba
vmacro02683 Vaccinium macrocarpon
vmacro08511 Vaccinium macrocarpon
VMungo0647G1329 Vigna mungo
VMungo0720G2496 Vigna mungo
VMungo0720G2794 Vigna mungo
VMungo1309G2537 Vigna mungo
Zm00001eb082290 Zea mays
Zm00001eb185090 Zea mays
Zm00001eb260350 Zea mays
Zm00001eb271080 Zea mays

User provided reference genes

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