Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19590 Brassica napus
A01p29960 Brassica napus
A05p18540 Brassica napus
A06p06520 Brassica napus
A06p07820 Brassica napus
A08p33650 Brassica napus
A08p34330 Brassica napus
A09p01780 Brassica napus
Aa31LG1G3800 Aethionema arabicum
Aa31LG1G5130 Aethionema arabicum
Aa31LG2G11020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3781 Anthoceros agrestis
Actinidia01608 Actinidia chinensis
Actinidia01919 Actinidia chinensis
Actinidia05599 Actinidia chinensis
Actinidia09881 Actinidia chinensis
Actinidia11073 Actinidia chinensis
Actinidia11798 Actinidia chinensis
Actinidia26173 Actinidia chinensis
Ah.03g136900 Amaranthus hybridus
Ah.09g235880 Amaranthus hybridus
Ah.14g089120 Amaranthus hybridus
AL1G20400 Arabidopsis lyrata
AL1G22110 Arabidopsis lyrata
AL2G18520 Arabidopsis lyrata
AL7G24430 Arabidopsis lyrata
Aqoxy1G02645 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28P5U9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8DVK0J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E4I99W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2I1FQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JG1AIX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KW8CFQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MD3X4L Arachis hypogaea
AT1G09812 Arabidopsis thaliana
AT1G11120 Arabidopsis thaliana
AT1G58007 Arabidopsis thaliana
AT4G28170 Arabidopsis thaliana
ATR0693G398 Amborella trichopoda
ATR1136G148 Amborella trichopoda
Atru.chr10.1970 Acer truncatum
Atru.chr6.3041 Acer truncatum
Atru.chr6.528 Acer truncatum
AUR62014759 Chenopodium quinoa
AUR62016936 Chenopodium quinoa
BcaB03g13275 Brassica carinata
BcaB03g13540 Brassica carinata
BcaB04g20320 Brassica carinata
BcaB06g26668 Brassica carinata
BcaC02g10586 Brassica carinata
BcaC05g24844 Brassica carinata
BcaC06g31838 Brassica carinata
BcaC07g38527 Brassica carinata
BcaC07g38639 Brassica carinata
BcaC09g49328 Brassica carinata
BcaC09g50508 Brassica carinata
BcaNung01591 Brassica carinata
BolC1t02411H Brassica oleracea
BolC1t03748H Brassica oleracea
BolC5t29543H Brassica oleracea
BolC5t29681H Brassica oleracea
BolC8t48950H Brassica oleracea
BolC8t49050H Brassica oleracea
BraA01t01893Z Brassica rapa
BraA01t03126Z Brassica rapa
BraA06t23863Z Brassica rapa
BraA06t23982Z Brassica rapa
BraA08t35280Z Brassica rapa
BraA08t35344Z Brassica rapa
C01p24620 Brassica napus
C01p37880 Brassica napus
C05p09400 Brassica napus
C08p13200 Brassica napus
C08p14130 Brassica napus
CAN.G1398.4 Capsicum annuum
CAN.G289.30 Capsicum annuum
CANSAT35G1360 Cannabis sativa
CANSAT54G1588 Cannabis sativa
CANSAT64G1286 Cannabis sativa
CARHR009810 Cardamine hirsuta
CARHR011320 Cardamine hirsuta
CARHR235880 Cardamine hirsuta
Carub.0001s0918 Capsella rubella
Carub.0001s1069 Capsella rubella
Carub.0002s0662 Capsella rubella
Carub.0007s1259 Capsella rubella
Ca_00298_v3 Cicer arietinum L.
Ca_18510_v3 Cicer arietinum L.
Cc00_g11500 Coffea canephora
Cc02_g23220 Coffea canephora
Cc05_g06670 Coffea canephora
CDE02G1595 Ceratophyllum demersum
CDE02G2187 Ceratophyllum demersum
CDE04G2500 Ceratophyllum demersum
CDE08G0536 Ceratophyllum demersum
Cfa014565 Carpinus fangiana
Ciclev10002791m.g Citrus clementina
Ciclev10017033m.g Citrus clementina
Ciclev10017068m.g Citrus clementina
CiPaw.03G171900 Carya illinoinensis
CiPaw.05G004200 Carya illinoinensis
CiPaw.06G174000 Carya illinoinensis
CiPaw.09G053300 Carya illinoinensis
CiPaw.10G045000 Carya illinoinensis
ClCG02G001210 Citrullus lanatus
ClCG03G005650 Citrullus lanatus
ClCG10G007100 Citrullus lanatus
COL.COLO4_17719 Corchorus olitorius
COL.COLO4_31537 Corchorus olitorius
COL.COLO4_35420 Corchorus olitorius
Cpa.g.sc113.40 Carica papaya
Cpa.g.sc27.92 Carica papaya
Cpa.g.sc34.120 Carica papaya
CsaV3_1G011900 Cucumis sativus L.
CsaV3_3G006410 Cucumis sativus L.
CsaV3_7G004240 Cucumis sativus L.
CSS0004255 Camellia sinensis var. sinensis
CSS0020669 Camellia sinensis var. sinensis
CSS0037471 Camellia sinensis var. sinensis
CSS0049816 Camellia sinensis var. sinensis
DCAR_004122 Daucus carota
DCAR_008060 Daucus carota
DCAR_009738 Daucus carota
Dinv01396 Davidia involucrata
Dinv07489 Davidia involucrata
Dinv19418 Davidia involucrata
Dinv23690 Davidia involucrata
Dinv39786 Davidia involucrata
Dinv40520 Davidia involucrata
Duzib052G0552 Durio zibethinus
Duzib132G0327 Durio zibethinus
Duzib160G0011 Durio zibethinus
Duzib192G0368 Durio zibethinus
Duzib235G0955 Durio zibethinus
Duzib248G0998 Durio zibethinus
Duzib248G1312 Durio zibethinus
ECA234G1596 Erigeron canadensis
ECA234G3919 Erigeron canadensis
ECA236G5142 Erigeron canadensis
EL10Ac8g20285 Beta vulgaris
Eucgr.D00693 Eucalyptus grandis
Eucgr.E03364 Eucalyptus grandis
Eucgr.G00317 Eucalyptus grandis
Eucgr.I02768 Eucalyptus grandis
Eucgr.K00945 Eucalyptus grandis
FAN02G1936 Fragaria x ananassa
FAN02G3562 Fragaria x ananassa
FAN05G5294 Fragaria x ananassa
FAN05G5775 Fragaria x ananassa
FAN09G0257 Fragaria x ananassa
FAN09G2031 Fragaria x ananassa
FAN11G1127 Fragaria x ananassa
FAN14G4875 Fragaria x ananassa
FAN14G5407 Fragaria x ananassa
FAN14G5455 Fragaria x ananassa
FAN16G2887 Fragaria x ananassa
FAN21G3186 Fragaria x ananassa
FAN25G0872 Fragaria x ananassa
FvH4_3g04540 Fragaria vesca
FvH4_6g10290 Fragaria vesca
FvH4_6g44970 Fragaria vesca
Glyma.07G192400 Glycine max
Glyma.12G108600 Glycine max
Glyma.12G166600 Glycine max
Glyma.13G184000 Glycine max
Glyma.13G244000 Glycine max
Glyma.15G069700 Glycine max
Glyma.16G002900 Glycine max
Glyma.U031210 Glycine max
Gohir.A01G184100 Gossypium hirsutum
Gohir.A03G215500 Gossypium hirsutum
Gohir.A05G163300 Gossypium hirsutum
Gohir.A06G124400 Gossypium hirsutum
Gohir.A10G022700 Gossypium hirsutum
Gohir.A13G056500 Gossypium hirsutum
Gohir.D01G175100 Gossypium hirsutum
Gohir.D02G237000 Gossypium hirsutum
Gohir.D05G166300 Gossypium hirsutum
Gohir.D06G129300 Gossypium hirsutum
Gohir.D10G023500 Gossypium hirsutum
Gohir.D13G065400 Gossypium hirsutum
Gorai.002G217300 Gossypium raimondii
Gorai.005G265600 Gossypium raimondii
Gorai.009G171400 Gossypium raimondii
Gorai.010G150900 Gossypium raimondii
Gorai.011G024600 Gossypium raimondii
Gorai.013G074600 Gossypium raimondii
GSVIVG01006335001 Vitis vinifera
GSVIVG01006946001 Vitis vinifera
GSVIVG01023240001 Vitis vinifera
GSVIVG01030562001 Vitis vinifera
HanXRQChr10g0289511 Helianthus annuus
HanXRQChr10g0299421 Helianthus annuus
HanXRQChr11g0329721 Helianthus annuus
HanXRQChr16g0517851 Helianthus annuus
Haze_06541 Corylus avellana
Haze_10040 Corylus avellana
Haze_13110 Corylus avellana
Hma1.2p1_0191F.1_g083400 Hydrangea macrophylla
Hma1.2p1_0633F.1_g192680 Hydrangea macrophylla
Hma1.2p1_0875F.1_g231500 Hydrangea macrophylla
HPP92_001819 Vanilla planifolia
HPP92_011432 Vanilla planifolia
HPP92_014058 Vanilla planifolia
Hund23657 Selenicereus undatus
Lalb_Chr05g0218281 Lupinus albus
Lalb_Chr09g0327481 Lupinus albus
Lalb_Chr09g0327491 Lupinus albus
Lalb_Chr16g0383461 Lupinus albus
Lalb_Chr18g0059821 Lupinus albus
Lalb_Chr19g0135391 Lupinus albus
Lalb_Chr20g0123721 Lupinus albus
Lj1A1210G35 Lonicera japonica
Lj1A733G59 Lonicera japonica
Lj4g0012464 Lotus japonicus
Lj6g0019393 Lotus japonicus
Lj6g0023146 Lotus japonicus
Lsat_1_v5_gn_4_55420 Lactuca sativa
Lsat_1_v5_gn_4_70220 Lactuca sativa
Lsat_1_v5_gn_7_75761 Lactuca sativa
Manes.07G024500 Manihot esculenta
Manes.10G117600 Manihot esculenta
Manes.12G088000 Manihot esculenta
Manes.13G149700 Manihot esculenta
Manes.16G023300 Manihot esculenta
Manes.17G041300 Manihot esculenta
Mapoly0026s0142 Marchantia polymorpha
MBI02_g37922_MAGBIO Magnolia biondii
MBI02_g46245_MAGBIO Magnolia biondii
MBI03_g07692_MAGBIO Magnolia biondii
MD05G1181400 Malus domestica
MD05G1322600 Malus domestica
MD08G1242100 Malus domestica
MD09G1091200 Malus domestica
MD14G1018300 Malus domestica
MD15G1435800 Malus domestica
MD17G1081100 Malus domestica
Medtr2g005740 Medicago truncatula
Medtr2g012780 Medicago truncatula
Medtr4g090440 Medicago truncatula
MELO3C002568.2 Cucumis melo
MELO3C016499.2 Cucumis melo
MELO3C018754.2 Cucumis melo
MELO3C026687.2 Cucumis melo
Migut.B00767 Erythranthe guttata
Migut.H01501 Erythranthe guttata
Migut.M01163 Erythranthe guttata
MSTRG.15900 Avicennia marina
MSTRG.16489 Avicennia marina
MSTRG.7321 Avicennia marina
Nitab4.5_0000635g0110 Nicotiana tabacum
Nitab4.5_0000667g0040 Nicotiana tabacum
Nitab4.5_0000787g0140 Nicotiana tabacum
Nitab4.5_0000998g0010 Nicotiana tabacum
Nitab4.5_0001144g0070 Nicotiana tabacum
Nitab4.5_0001820g0060 Nicotiana tabacum
Nitab4.5_0001833g0030 Nicotiana tabacum
Nitab4.5_0006171g0020 Nicotiana tabacum
Nitab4.5_0007319g0030 Nicotiana tabacum
Nn1g03960 Nelumbo nucifera
Nn1g06686 Nelumbo nucifera
Oeu000138.1 Olea europaea
Oeu005072.3 Olea europaea
Oeu025513.1 Olea europaea
Oeu038242.1 Olea europaea
Oeu045921.1 Olea europaea
Oeu045922.1 Olea europaea
Oeu049804.1 Olea europaea
Oeu053962.1 Olea europaea
Oeu053963.2 Olea europaea
Os01g0878000 Oryza sativa ssp. japonica
Os05g0426800 Oryza sativa ssp. japonica
Os07g0565500 Oryza sativa ssp. japonica
Peaxi162Scf00011g01319 Petunia axillaris
Peaxi162Scf00137g00510 Petunia axillaris
Peaxi162Scf00150g01311 Petunia axillaris
Peaxi162Scf00152g01527 Petunia axillaris
Peaxi162Scf00608g00089 Petunia axillaris
Peaxi162Scf00612g00056 Petunia axillaris
PGR004G2174 Punica granatum
PGR042G1051 Punica granatum
PGR042G1225 Punica granatum
PGR142G1306 Punica granatum
PGR142G4175 Punica granatum
PGSC0003DMG400005033 Solanum tuberosum
PGSC0003DMG400021675 Solanum tuberosum
PGSC0003DMG400022427 Solanum tuberosum
PGSC0003DMG400024914 Solanum tuberosum
Phvul.002G224500 Phaseolus vulgaris
Phvul.006G189600 Phaseolus vulgaris
Phvul.006G219100 Phaseolus vulgaris
Phvul.011G112900 Phaseolus vulgaris
Potri.003G006900 Populus trichocarpa
Potri.004G037200 Populus trichocarpa
Potri.004G224200 Populus trichocarpa
Potri.011G045900 Populus trichocarpa
Potri.019G103800 Populus trichocarpa
Prupe.1G579500 Prunus persica
Prupe.3G233800 Prunus persica
Prupe.4G040100 Prunus persica
Psat1g207080 Pisum sativum
Psat1g222600 Pisum sativum
Psat7g111680 Pisum sativum
PSO017G6966 Papaver somniferum
PSO170G1466 Papaver somniferum
PSO170G1800 Papaver somniferum
PSO541G4283 Papaver somniferum
PSO675G5067 Papaver somniferum
PSO782G3936 Papaver somniferum
QL02p100734 Quercus lobata
QL08p037648 Quercus lobata
RcHm_v2.0_Chr2g0162241 Rosa chinensis
RcHm_v2.0_Chr5g0007461 Rosa chinensis
Rhsim02G0121200 Rhododendron simsii
Rhsim02G0121900 Rhododendron simsii
Rhsim04G0066300 Rhododendron simsii
Rhsim05G0114300 Rhododendron simsii
Rhsim13G0175800 Rhododendron simsii
Sabra01G0170300 Salix brachista
Sabra03G0003600 Salix brachista
Sabra13G0116500 Salix brachista
Sabra19G0114500 Salix brachista
SalBow1G4230 Salvia bowleyana
SalBow7G1432 Salvia bowleyana
SalBow7G1953 Salvia bowleyana
Sc17g0006410 Simmondsia chinensis
Sc21g0002380 Simmondsia chinensis
Sed0003923 Sechium edule
Sed0010126 Sechium edule
Sed0010317 Sechium edule
Sed0012012 Sechium edule
SEGI_05395 Sequoiadendron giganteum
SEGI_06351 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29658 Striga asiatica
SGA_v2.0_scaffold22G09747 Striga asiatica
SGA_v2.0_scaffold272G46385 Striga asiatica
SHI02106 Sapria himalayana
SMO254G0010 Selaginella moellendorffii
Solyc01g103500.4 Solanum lycopersicum
Solyc02g078720.4 Solanum lycopersicum
Solyc03g006590.3 Solanum lycopersicum
Solyc10g008540.3 Solanum lycopersicum
Sopen01g045860 Solanum pennellii
Sopen02g023570 Solanum pennellii
Sopen03g002600 Solanum pennellii
Sopen10g004350 Solanum pennellii
Sp1g08430 Schrenkiella parvula
Sp1g09800 Schrenkiella parvula
Sp2g03300 Schrenkiella parvula
Sp2g05600 Schrenkiella parvula
Sp7g26120 Schrenkiella parvula
TAR381G1556 Trochodendron aralioides
TAR626G1330 Trochodendron aralioides
TAR627G0629 Trochodendron aralioides
TAR629G0497 Trochodendron aralioides
THA.LOC104809558 Tarenaya hassleriana
THA.LOC104819126 Tarenaya hassleriana
Thecc.02G017800 Theobroma cacao
Thecc.02G174500 Theobroma cacao
Thecc.06G194700 Theobroma cacao
Thhalv10008990m.g Eutrema salsugineum
Thhalv10009091m.g Eutrema salsugineum
Thhalv10023735m.g Eutrema salsugineum
Thhalv10024160m.g Eutrema salsugineum
Thhalv10026992m.g Eutrema salsugineum
TPR.G2099 Trifolium pratense
TPR.G32405 Trifolium pratense
TPR.G36727 Trifolium pratense
TWI14G0602 Tripterygium wilfordii
TWI23G0880 Tripterygium wilfordii
TWI36G0444 Tripterygium wilfordii
TWI38G1840 Tripterygium wilfordii
TWI63G0297 Tripterygium wilfordii
unitig_26.g9364 Utricularia gibba
unitig_749.g13652 Utricularia gibba
unitig_749.g13952 Utricularia gibba
vmacro03830 Vaccinium macrocarpon
vmacro09271 Vaccinium macrocarpon
vmacro15879 Vaccinium macrocarpon
vmacro19863 Vaccinium macrocarpon
VMungo0251G3395 Vigna mungo
VMungo0540G0084 Vigna mungo
VMungo0540G0239 Vigna mungo
VMungo1127G1764 Vigna mungo
Zm00001eb107050 Zea mays
Zm00001eb145900 Zea mays
Zm00001eb288490 Zea mays
Zm00001eb324490 Zea mays

User provided reference genes

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