Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12990 Brassica napus
A07p13010 Brassica napus
A08p27400 Brassica napus
A08p27420 Brassica napus
A09p39980 Brassica napus
A09p40000 Brassica napus
Aa31LG7G8490 Aethionema arabicum
Aa31LG7G8500 Aethionema arabicum
Actinidia01982 Actinidia chinensis
Actinidia04842 Actinidia chinensis
Actinidia07817 Actinidia chinensis
Actinidia17578 Actinidia chinensis
Actinidia26246 Actinidia chinensis
Actinidia28637 Actinidia chinensis
Actinidia32294 Actinidia chinensis
Ah.02g126480 Amaranthus hybridus
Ah.03g139060 Amaranthus hybridus
AL1G39120 Arabidopsis lyrata
AL1G39140 Arabidopsis lyrata
Aqoxy3G03584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20D4K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2IZ1HG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3E1TBZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GRPH1V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WCFZ4Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YM25EH Arachis hypogaea
AT1G26590 Arabidopsis thaliana
AT1G26610 Arabidopsis thaliana
ATR0064G079 Amborella trichopoda
Atru.chr11.1665 Acer truncatum
Atru.chr8.408 Acer truncatum
Atru.chr9.385 Acer truncatum
AUR62007937 Chenopodium quinoa
BcaB01g01780 Brassica carinata
BcaB03g11997 Brassica carinata
BcaB03g11999 Brassica carinata
BcaB03g14071 Brassica carinata
BcaB03g14072 Brassica carinata
BcaB03g14073 Brassica carinata
BcaB03g14075 Brassica carinata
BcaB03g14077 Brassica carinata
BcaC01g01747 Brassica carinata
BcaC01g01750 Brassica carinata
BcaC05g26407 Brassica carinata
BcaC05g26411 Brassica carinata
BcaC06g35136 Brassica carinata
BcaC06g35138 Brassica carinata
BolC5t31177H Brassica oleracea
BolC5t31178H Brassica oleracea
BolC5t31180H Brassica oleracea
BolC6t35872H Brassica oleracea
BolC7t42462H Brassica oleracea
BolC7t42465H Brassica oleracea
BraA07t29070Z Brassica rapa
BraA07t29072Z Brassica rapa
BraA08t34681Z Brassica rapa
BraA09t39496Z Brassica rapa
BraA09t39498Z Brassica rapa
C03p72310 Brassica napus
C05p24440 Brassica napus
C05p24460 Brassica napus
C06p07880 Brassica napus
C07p19440 Brassica napus
C07p19460 Brassica napus
CAN.G10.16 Capsicum annuum
CAN.G479.29 Capsicum annuum
CAN.G616.7 Capsicum annuum
CAN.G827.1 Capsicum annuum
CANSAT64G1558 Cannabis sativa
CANSAT64G2408 Cannabis sativa
CANSAT80G2872 Cannabis sativa
CARHR025360 Cardamine hirsuta
CARHR025380 Cardamine hirsuta
Carub.0001s2442 Capsella rubella
Carub.0001s2444 Capsella rubella
Carub.0001s2445 Capsella rubella
Ca_04937_v3 Cicer arietinum L.
Ca_13810_v3 Cicer arietinum L.
Ca_18809_v3 Cicer arietinum L.
Ca_21788_v3 Cicer arietinum L.
Cc04_g15090 Coffea canephora
Cc11_g12200 Coffea canephora
Cfa007640 Carpinus fangiana
Cfa007641 Carpinus fangiana
Cfa008895 Carpinus fangiana
Cfa019302 Carpinus fangiana
Ciclev10011561m.g Citrus clementina
Ciclev10019977m.g Citrus clementina
Ciclev10031223m.g Citrus clementina
CiPaw.03G090600 Carya illinoinensis
CiPaw.05G126700 Carya illinoinensis
CiPaw.06G091100 Carya illinoinensis
CiPaw.11G050300 Carya illinoinensis
CiPaw.12G007700 Carya illinoinensis
ClCG04G011920 Citrullus lanatus
ClCG05G023790 Citrullus lanatus
ClCG06G015790 Citrullus lanatus
ClCG07G007300 Citrullus lanatus
COL.COLO4_21392 Corchorus olitorius
COL.COLO4_22218 Corchorus olitorius
COL.COLO4_27912 Corchorus olitorius
Cpa.g.c33076 Carica papaya
Cpa.g.sc1.105 Carica papaya
Cpa.g.sc14.159 Carica papaya
CsaV3_1G002750 Cucumis sativus L.
CsaV3_1G005870 Cucumis sativus L.
CsaV3_4G008830 Cucumis sativus L.
CsaV3_5G033220 Cucumis sativus L.
CSS0003000 Camellia sinensis var. sinensis
CSS0006199 Camellia sinensis var. sinensis
CSS0007053 Camellia sinensis var. sinensis
CSS0021009 Camellia sinensis var. sinensis
CSS0031827 Camellia sinensis var. sinensis
DCAR_011049 Daucus carota
DCAR_016593 Daucus carota
DCAR_023807 Daucus carota
DCAR_025415 Daucus carota
DCAR_026014 Daucus carota
DCAR_027459 Daucus carota
DCAR_030031 Daucus carota
Dinv10891 Davidia involucrata
Dinv16716 Davidia involucrata
Dinv34085 Davidia involucrata
Dinv34959 Davidia involucrata
Duzib068G0063 Durio zibethinus
Duzib084G1412 Durio zibethinus
Duzib187G0503 Durio zibethinus
Duzib205G0521 Durio zibethinus
Duzib248G0531 Durio zibethinus
Duzib251G0451 Durio zibethinus
Duzib264G1305 Durio zibethinus
Duzib268G1525 Durio zibethinus
ECA232G2093 Erigeron canadensis
ECA232G2612 Erigeron canadensis
ECA233G5070 Erigeron canadensis
ECA234G3829 Erigeron canadensis
ECA246G1398 Erigeron canadensis
ECA247G4074 Erigeron canadensis
EL10Ac6g14971 Beta vulgaris
Eucgr.B00572 Eucalyptus grandis
Eucgr.B03164 Eucalyptus grandis
Eucgr.K02500 Eucalyptus grandis
FAN05G3652 Fragaria x ananassa
FAN07G1897 Fragaria x ananassa
FAN08G1328 Fragaria x ananassa
FAN09G1558 Fragaria x ananassa
FAN09G4404 Fragaria x ananassa
FAN12G4077 Fragaria x ananassa
FAN13G0498 Fragaria x ananassa
FAN14G2327 Fragaria x ananassa
FAN17G1222 Fragaria x ananassa
FAN18G0168 Fragaria x ananassa
FAN18G3534 Fragaria x ananassa
FAN22G1484 Fragaria x ananassa
FvH4_1g19381 Fragaria vesca
FvH4_4g30350 Fragaria vesca
FvH4_5g14270 Fragaria vesca
FvH4_5g14274 Fragaria vesca
FvH4_6g47240 Fragaria vesca
Glyma.01G056900 Glycine max
Glyma.02G115300 Glycine max
Glyma.04G164300 Glycine max
Glyma.05G022700 Glycine max
Glyma.06G201200 Glycine max
Glyma.07G226800 Glycine max
Glyma.17G076900 Glycine max
Glyma.20G026600 Glycine max
Gohir.A03G069200 Gossypium hirsutum
Gohir.A05G306300 Gossypium hirsutum
Gohir.A05G371200 Gossypium hirsutum
Gohir.A12G162000 Gossypium hirsutum
Gohir.A13G080800 Gossypium hirsutum
Gohir.D03G095700 Gossypium hirsutum
Gohir.D04G044500 Gossypium hirsutum
Gohir.D05G306300 Gossypium hirsutum
Gohir.D12G165300 Gossypium hirsutum
Gohir.D13G080600 Gossypium hirsutum
Gorai.003G100400 Gossypium raimondii
Gorai.008G178000 Gossypium raimondii
Gorai.009G326300 Gossypium raimondii
Gorai.012G049800 Gossypium raimondii
Gorai.013G092400 Gossypium raimondii
GSVIVG01007927001 Vitis vinifera
GSVIVG01012197001 Vitis vinifera
HanXRQChr03g0075111 Helianthus annuus
HanXRQChr03g0077351 Helianthus annuus
HanXRQChr04g0101431 Helianthus annuus
HanXRQChr07g0200851 Helianthus annuus
HanXRQChr08g0211551 Helianthus annuus
HanXRQChr09g0266131 Helianthus annuus
HanXRQChr12g0362971 Helianthus annuus
HanXRQChr12g0379521 Helianthus annuus
HanXRQChr14g0439181 Helianthus annuus
HanXRQChr16g0502251 Helianthus annuus
HanXRQChr16g0529501 Helianthus annuus
HanXRQChr17g0546651 Helianthus annuus
Haze_07685 Corylus avellana
Haze_11926 Corylus avellana
Haze_14456 Corylus avellana
Haze_14457 Corylus avellana
Hma1.2p1_0322F.1_g124870 Hydrangea macrophylla
HPP92_006058 Vanilla planifolia
HPP92_012301 Vanilla planifolia
HPP92_014053 Vanilla planifolia
HPP92_018602 Vanilla planifolia
HPP92_020442 Vanilla planifolia
Lalb_Chr04g0255741 Lupinus albus
Lalb_Chr05g0220031 Lupinus albus
Lalb_Chr07g0178261 Lupinus albus
Lalb_Chr09g0329031 Lupinus albus
Lalb_Chr10g0098681 Lupinus albus
Lalb_Chr12g0197041 Lupinus albus
Lalb_Chr13g0302941 Lupinus albus
Lalb_Chr16g0385601 Lupinus albus
Lalb_Chr17g0341121 Lupinus albus
Lj2g0006470 Lotus japonicus
Lj4C117T2 Lonicera japonica
Lj4g0007457 Lotus japonicus
Lj4g0014343 Lotus japonicus
Lj5P105T25 Lonicera japonica
Lj6P781T18 Lonicera japonica
Lj9P469T55 Lonicera japonica
Lsat_1_v5_gn_3_98001 Lactuca sativa
Lsat_1_v5_gn_4_109861 Lactuca sativa
Lsat_1_v5_gn_8_47501 Lactuca sativa
Lsat_1_v5_gn_8_47521 Lactuca sativa
Manes.01G029200 Manihot esculenta
Manes.02G053200 Manihot esculenta
Manes.05G108700 Manihot esculenta
Manes.06G087200 Manihot esculenta
Manes.14G084100 Manihot esculenta
MBI16_g09911_MAGBIO Magnolia biondii
MBI19_g42658_MAGBIO Magnolia biondii
MBI19_g45961_MAGBIO Magnolia biondii
MD00G1156100 Malus domestica
MD06G1199800 Malus domestica
MD09G1062700 Malus domestica
MD13G1064600 Malus domestica
MD14G1209000 Malus domestica
MD16G1063100 Malus domestica
Medtr3g023760 Medicago truncatula
Medtr4g082980 Medicago truncatula
Medtr4g109340 Medicago truncatula
Medtr5g043930 Medicago truncatula
MELO3C002016.2 Cucumis melo
MELO3C012144.2 Cucumis melo
MELO3C017210.2 Cucumis melo
MELO3C018946.2 Cucumis melo
Migut.D01677 Erythranthe guttata
Migut.E00055 Erythranthe guttata
Migut.H00643 Erythranthe guttata
Migut.L01205 Erythranthe guttata
MSTRG.2317 Avicennia marina
MSTRG.742 Avicennia marina
MSTRG.7754 Avicennia marina
MSTRG.9603 Avicennia marina
Nitab4.5_0000014g0350 Nicotiana tabacum
Nitab4.5_0000565g0140 Nicotiana tabacum
Nitab4.5_0001688g0050 Nicotiana tabacum
Nitab4.5_0002052g0060 Nicotiana tabacum
Nitab4.5_0002362g0050 Nicotiana tabacum
Nitab4.5_0002594g0090 Nicotiana tabacum
Nitab4.5_0002881g0100 Nicotiana tabacum
Nitab4.5_0004511g0050 Nicotiana tabacum
Nitab4.5_0005493g0010 Nicotiana tabacum
Nitab4.5_0007438g0020 Nicotiana tabacum
Nn3g17399 Nelumbo nucifera
Nn4g23377 Nelumbo nucifera
Oeu004567.2 Olea europaea
Oeu010242.1 Olea europaea
Oeu016222.2 Olea europaea
Oeu016750.1 Olea europaea
Oeu022468.1 Olea europaea
Oeu038368.1 Olea europaea
Oeu048149.1 Olea europaea
Oeu062152.2 Olea europaea
Oeu062484.1 Olea europaea
Os07g0598800 Oryza sativa ssp. japonica
Peaxi162Scf00013g00059 Petunia axillaris
Peaxi162Scf00026g00203 Petunia axillaris
Peaxi162Scf00106g00091 Petunia axillaris
Peaxi162Scf00166g00065 Petunia axillaris
Peaxi162Scf00201g00007 Petunia axillaris
Peaxi162Scf00314g00016 Petunia axillaris
Peaxi162Scf00930g00041 Petunia axillaris
PGR044G0400 Punica granatum
PGR119G0590 Punica granatum
PGSC0003DMG400002817 Solanum tuberosum
PGSC0003DMG400007715 Solanum tuberosum
PGSC0003DMG400024550 Solanum tuberosum
PGSC0003DMG400028323 Solanum tuberosum
Phvul.002G082200 Phaseolus vulgaris
Phvul.002G168500 Phaseolus vulgaris
Phvul.009G190665 Phaseolus vulgaris
Phvul.L001618 Phaseolus vulgaris
Potri.004G118100 Populus trichocarpa
Potri.008G094500 Populus trichocarpa
Potri.010G159600 Populus trichocarpa
Potri.017G091800 Populus trichocarpa
Prupe.1G283600 Prunus persica
Prupe.3G257500 Prunus persica
Prupe.5G201400 Prunus persica
Psat2g128840 Pisum sativum
Psat4g048400 Pisum sativum
Psat5g211760 Pisum sativum
Psat7g134240 Pisum sativum
PSO017G3675 Papaver somniferum
PSO478G1941 Papaver somniferum
PSO832G3048 Papaver somniferum
QL02p039229 Quercus lobata
QL03p071224 Quercus lobata
QL10p018742 Quercus lobata
RcHm_v2.0_Chr2g0166281 Rosa chinensis
RcHm_v2.0_Chr4g0438641 Rosa chinensis
RcHm_v2.0_Chr7g0182641 Rosa chinensis
Rhsim08G0074300 Rhododendron simsii
Rhsim08G0148400 Rhododendron simsii
Rhsim10G0044400 Rhododendron simsii
Rhsim10G0044700 Rhododendron simsii
Sabra04G0068300 Salix brachista
Sabra08G0071000 Salix brachista
Sabra10G0121300 Salix brachista
Sabra17G0080800 Salix brachista
SalBow2G0127 Salvia bowleyana
SalBow8G2697 Salvia bowleyana
Sc04g0003100 Simmondsia chinensis
Sc04g0007690 Simmondsia chinensis
Sc11g0002360 Simmondsia chinensis
Sc14g0006190 Simmondsia chinensis
Sed0006849 Sechium edule
Sed0012205 Sechium edule
Sed0016363 Sechium edule
Sed0019820 Sechium edule
Sed0020081 Sechium edule
Sed0022118 Sechium edule
SGA_v2.0_scaffold287G47161 Striga asiatica
SGA_v2.0_scaffold36G14444 Striga asiatica
SGA_v2.0_scaffold4G02403 Striga asiatica
Solyc01g010410.3 Solanum lycopersicum
Solyc02g088670.1 Solanum lycopersicum
Solyc03g115450.1 Solanum lycopersicum
Solyc04g005440.1 Solanum lycopersicum
Solyc05g012490.2 Solanum lycopersicum
Sopen01g006020 Solanum pennellii
Sopen02g033390 Solanum pennellii
Sopen03g034450 Solanum pennellii
Sopen04g001440 Solanum pennellii
Sopen05g007300 Solanum pennellii
Sp1g22190 Schrenkiella parvula
Sp1g22200 Schrenkiella parvula
TAR371G0514 Trochodendron aralioides
TAR374G1312 Trochodendron aralioides
TAR622G0347 Trochodendron aralioides
TAR629G0024 Trochodendron aralioides
TAR629G3260 Trochodendron aralioides
THA.LOC104805032 Tarenaya hassleriana
THA.LOC104808577 Tarenaya hassleriana
THA.LOC104822895 Tarenaya hassleriana
Thecc.02G334000 Theobroma cacao
Thecc.03G097400 Theobroma cacao
Thecc.04G092300 Theobroma cacao
Thhalv10007938m.g Eutrema salsugineum
Thhalv10009600m.g Eutrema salsugineum
TPR.G12271 Trifolium pratense
TPR.G2047 Trifolium pratense
TPR.G24464 Trifolium pratense
TPR.G31115 Trifolium pratense
TPR.G34061 Trifolium pratense
TWI15G0313 Tripterygium wilfordii
TWI31G0488 Tripterygium wilfordii
TWI32G0161 Tripterygium wilfordii
TWI34G0283 Tripterygium wilfordii
TWI60G1673 Tripterygium wilfordii
TWI79G0022 Tripterygium wilfordii
TWI81G0627 Tripterygium wilfordii
unitig_22.g6899 Utricularia gibba
unitig_22.g6900 Utricularia gibba
unitig_26.g10291 Utricularia gibba
unitig_27.g25217 Utricularia gibba
unitig_699.g19504 Utricularia gibba
unitig_699.g19626 Utricularia gibba
unitig_699.g19908 Utricularia gibba
unitig_747.g21187 Utricularia gibba
unitig_8.g3187 Utricularia gibba
unitig_8.g3455 Utricularia gibba
VMungo0251G2185 Vigna mungo
VMungo1215G1227 Vigna mungo
VMungo1215G1529 Vigna mungo
VMungo1309G2368 Vigna mungo
Zm00001eb108460 Zea mays

User provided reference genes

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