Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38660 Brassica napus
A03p34110 Brassica napus
A04p00250 Brassica napus
A06p37430 Brassica napus
A09p05300 Brassica napus
A09p05330 Brassica napus
Aa31LG10G16990 Aethionema arabicum
Aa31LG10G9350 Aethionema arabicum
Aa31LG11G11540 Aethionema arabicum
Aa31LG11G9260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4118 Anthoceros agrestis
Actinidia09141 Actinidia chinensis
Actinidia19791 Actinidia chinensis
Actinidia24642 Actinidia chinensis
Actinidia28665 Actinidia chinensis
Ah.04g160240 Amaranthus hybridus
Ah.06g189300 Amaranthus hybridus
AL3G15750 Arabidopsis lyrata
AL5G45990 Arabidopsis lyrata
AL6G39470 Arabidopsis lyrata
Aqoxy2G00550 Aquilegia oxysepala
Aqoxy469s001 Aquilegia oxysepala
Aqoxy4G00038 Aquilegia oxysepala
Aqoxy4G00607 Aquilegia oxysepala
Aqoxy4G01195 Aquilegia oxysepala
Aqoxy4G01196 Aquilegia oxysepala
Aqoxy4G02158 Aquilegia oxysepala
Aqoxy4G02159 Aquilegia oxysepala
Aqoxy5G00508 Aquilegia oxysepala
Aqoxy7G00110 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.58XGVW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVCY77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MRKK2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX1CYR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VLT5AV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5YV4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHES61 Arachis hypogaea
AT3G05310 Arabidopsis thaliana
AT3G63150 Arabidopsis thaliana
AT5G27540 Arabidopsis thaliana
ATR0693G328 Amborella trichopoda
ATR0693G382 Amborella trichopoda
Atru.chr2.415 Acer truncatum
Atru.chr5.1432 Acer truncatum
AUR62000835 Chenopodium quinoa
AUR62005139 Chenopodium quinoa
BcaB04g19269 Brassica carinata
BcaB04g19270 Brassica carinata
BcaB04g19675 Brassica carinata
BcaB04g19678 Brassica carinata
BcaB04g21453 Brassica carinata
BcaC02g10351 Brassica carinata
BcaC03g17791 Brassica carinata
BcaC05g26556 Brassica carinata
BcaC05g26557 Brassica carinata
BcaC05g26558 Brassica carinata
BcaNung04545 Brassica carinata
BcaNung04546 Brassica carinata
BNapus_Darmor_BZH_scaffold_114p00210 Brassica napus
BolC1t05703H Brassica oleracea
BolC2t11884H Brassica oleracea
BolC3t16431H Brassica oleracea
BolC4t24539H Brassica oleracea
BolC7t44623H Brassica oleracea
BolC9t53508H Brassica oleracea
BraA02t08842Z Brassica rapa
BraA04t15744Z Brassica rapa
BraA06t26666Z Brassica rapa
BraA09t36171Z Brassica rapa
BraSC132t45513Z Brassica rapa
C02p58160 Brassica napus
C03p41500 Brassica napus
C04p30070 Brassica napus
C07p40930 Brassica napus
C09p05810 Brassica napus
CAN.G1077.12 Capsicum annuum
CAN.G904.3 Capsicum annuum
CANSAT25G3103 Cannabis sativa
CANSAT54G0978 Cannabis sativa
CARHR079650 Cardamine hirsuta
CARHR173470 Cardamine hirsuta
CARHR186100 Cardamine hirsuta
Carub.0003s0458 Capsella rubella
Carub.0005s2982 Capsella rubella
Carub.0006s2502 Capsella rubella
Ca_03660_v3 Cicer arietinum L.
Ca_08579_v3 Cicer arietinum L.
Ca_09759_v3 Cicer arietinum L.
Ca_10109_v3 Cicer arietinum L.
Ca_14329_v3 Cicer arietinum L.
CBR_g36449 Chara braunii
Cc02_g33480 Coffea canephora
CDE05G0595 Ceratophyllum demersum
Cfa005422 Carpinus fangiana
Cfa006134 Carpinus fangiana
Cfa007290 Carpinus fangiana
Cfa007633 Carpinus fangiana
Cfa007636 Carpinus fangiana
Cfa021343 Carpinus fangiana
Ciclev10000541m.g Citrus clementina
Ciclev10019250m.g Citrus clementina
CiPaw.07G017200 Carya illinoinensis
CiPaw.07G092200 Carya illinoinensis
CiPaw.08G165100 Carya illinoinensis
ClCG02G015860 Citrullus lanatus
ClCG09G007010 Citrullus lanatus
COL.COLO4_09101 Corchorus olitorius
COL.COLO4_13479 Corchorus olitorius
COL.COLO4_15020 Corchorus olitorius
Cpa.g.sc48.43 Carica papaya
Cpa.g.sc52.32 Carica papaya
Cre08.g375200 Chlamydomonas reinhardtii
CsaV3_2G005200 Cucumis sativus L.
CsaV3_7G028150 Cucumis sativus L.
CSS0019541 Camellia sinensis var. sinensis
CSS0022196 Camellia sinensis var. sinensis
CSS0027955 Camellia sinensis var. sinensis
CSS0031208 Camellia sinensis var. sinensis
CSS0034451 Camellia sinensis var. sinensis
CSS0037311 Camellia sinensis var. sinensis
CSS0042677 Camellia sinensis var. sinensis
CSS0046377 Camellia sinensis var. sinensis
DCAR_002737 Daucus carota
DCAR_024944 Daucus carota
DCAR_028249 Daucus carota
DCAR_028250 Daucus carota
Dinv08921 Davidia involucrata
Dinv19089 Davidia involucrata
Dinv23945 Davidia involucrata
Dinv32939 Davidia involucrata
Dinv40281 Davidia involucrata
Duzib138G0894 Durio zibethinus
Duzib177G1027 Durio zibethinus
ECA234G2572 Erigeron canadensis
ECA234G3823 Erigeron canadensis
ECA234G4524 Erigeron canadensis
ECA236G0921 Erigeron canadensis
ECA238G0456 Erigeron canadensis
ECA248G1719 Erigeron canadensis
EL10Ac4g09345 Beta vulgaris
Eucgr.B01990 Eucalyptus grandis
FAN02G2906 Fragaria x ananassa
FAN05G3457 Fragaria x ananassa
FAN05G4420 Fragaria x ananassa
FAN09G2261 Fragaria x ananassa
FAN14G1623 Fragaria x ananassa
FAN14G3749 Fragaria x ananassa
FAN15G2458 Fragaria x ananassa
FAN20G2538 Fragaria x ananassa
FAN24G1444 Fragaria x ananassa
FAN27G0431 Fragaria x ananassa
FvH4_2g23630 Fragaria vesca
FvH4_6g05770 Fragaria vesca
Glyma.02G147600 Glycine max
Glyma.03G153300 Glycine max
Glyma.10G026200 Glycine max
Glyma.10G154700 Glycine max
Glyma.19G155700 Glycine max
Glyma.19G169800 Glycine max
Glyma.20G233700 Glycine max
Gohir.A08G067700 Gossypium hirsutum
Gohir.A08G210600 Gossypium hirsutum
Gohir.A11G295700 Gossypium hirsutum
Gohir.D05G065600 Gossypium hirsutum
Gohir.D07G100250 Gossypium hirsutum
Gohir.D08G076200 Gossypium hirsutum
Gohir.D08G227400 Gossypium hirsutum
Gohir.D11G311200 Gossypium hirsutum
Gorai.004G080500 Gossypium raimondii
Gorai.004G241600 Gossypium raimondii
Gorai.005G089500 Gossypium raimondii
Gorai.006G031500 Gossypium raimondii
Gorai.007G101100 Gossypium raimondii
Gorai.007G342600 Gossypium raimondii
Gorai.009G066400 Gossypium raimondii
GSVIVG01000044001 Vitis vinifera
GSVIVG01011087001 Vitis vinifera
GSVIVG01033134001 Vitis vinifera
HanXRQChr01g0003161 Helianthus annuus
HanXRQChr04g0118751 Helianthus annuus
HanXRQChr08g0233291 Helianthus annuus
HanXRQChr10g0291631 Helianthus annuus
HanXRQChr11g0339231 Helianthus annuus
HanXRQChr14g0437921 Helianthus annuus
HanXRQChr14g0446261 Helianthus annuus
HanXRQChr15g0472051 Helianthus annuus
HanXRQChr15g0472071 Helianthus annuus
Haze_01875 Corylus avellana
Haze_01876 Corylus avellana
Haze_04202 Corylus avellana
Haze_04716 Corylus avellana
Haze_06034 Corylus avellana
Haze_14853 Corylus avellana
Haze_14954 Corylus avellana
Haze_14974 Corylus avellana
Haze_14976 Corylus avellana
Haze_15513 Corylus avellana
Haze_27136 Corylus avellana
Hma1.2p1_0257F.1_g103470 Hydrangea macrophylla
Hma1.2p1_0380F.1_g139920 Hydrangea macrophylla
Hma1.2p1_0617F.1_g190260 Hydrangea macrophylla
Hma1.2p1_0928F.1_g237840 Hydrangea macrophylla
HPP92_018408 Vanilla planifolia
HPP92_018410 Vanilla planifolia
HPP92_018411 Vanilla planifolia
Hund07066 Selenicereus undatus
Hund21689 Selenicereus undatus
Hund21690 Selenicereus undatus
Lalb_Chr01g0020181 Lupinus albus
Lalb_Chr02g0148271 Lupinus albus
Lalb_Chr06g0163021 Lupinus albus
Lalb_Chr21g0310701 Lupinus albus
Lj1g0014187 Lotus japonicus
Lj2C1174G2 Lonicera japonica
Lj5A536G16 Lonicera japonica
Lj5C536T5 Lonicera japonica
Lj5g0001858 Lotus japonicus
Lj5g0013990 Lotus japonicus
Lj9C33G2 Lonicera japonica
Lj9C33G5 Lonicera japonica
Lsat_1_v5_gn_2_67460 Lactuca sativa
Lsat_1_v5_gn_4_139120 Lactuca sativa
Lsat_1_v5_gn_5_188301 Lactuca sativa
Lsat_1_v5_gn_5_87720 Lactuca sativa
Lsat_1_v5_gn_8_56280 Lactuca sativa
Manes.01G208001 Manihot esculenta
Manes.05G075900 Manihot esculenta
Manes.08G121200 Manihot esculenta
Manes.09G166600 Manihot esculenta
Mapoly0089s0014 Marchantia polymorpha
MBI19_g27172_MAGBIO Magnolia biondii
MCO05G040 Micromonas commoda
MD03G1265800 Malus domestica
MD04G1205700 Malus domestica
MD11G1286300 Malus domestica
MD12G1219900 Malus domestica
MD15G1278200 Malus domestica
Medtr1g060400 Medicago truncatula
Medtr1g072280 Medicago truncatula
Medtr1g082870 Medicago truncatula
Medtr2g023300 Medicago truncatula
Medtr4g105060 Medicago truncatula
Medtr4g123543 Medicago truncatula
Medtr4g129310 Medicago truncatula
Medtr4g129880 Medicago truncatula
Medtr4g129890 Medicago truncatula
Medtr5g034140 Medicago truncatula
Medtr5g034580 Medicago truncatula
Medtr5g034660 Medicago truncatula
Medtr5g040690 Medicago truncatula
Medtr7g094810 Medicago truncatula
Medtr8g010670 Medicago truncatula
MELO3C004273.2 Cucumis melo
MELO3C015839.2 Cucumis melo
Migut.D00293 Erythranthe guttata
Migut.L01285 Erythranthe guttata
MSTRG.18232 Avicennia marina
MSTRG.21563 Avicennia marina
MSTRG.704 Avicennia marina
MSTRG.7798 Avicennia marina
Nitab4.5_0000458g0010 Nicotiana tabacum
Nitab4.5_0005388g0070 Nicotiana tabacum
Nitab4.5_0006928g0010 Nicotiana tabacum
Nitab4.5_0010680g0010 Nicotiana tabacum
Nn1g09237 Nelumbo nucifera
Nn4g26241 Nelumbo nucifera
Oeu015968.1 Olea europaea
Oeu015970.1 Olea europaea
Oeu016076.1 Olea europaea
Oeu020855.1 Olea europaea
Oeu020856.1 Olea europaea
Oeu038296.1 Olea europaea
Oeu041592.1 Olea europaea
Oeu043733.1 Olea europaea
Oeu054964.1 Olea europaea
Os01g0843300 Oryza sativa ssp. japonica
Os03g0810600 Oryza sativa ssp. japonica
Os03g0810700 Oryza sativa ssp. japonica
Peaxi162Scf00037g00031 Petunia axillaris
Peaxi162Scf01622g00011 Petunia axillaris
PGR083G0958 Punica granatum
PGSC0003DMG400003454 Solanum tuberosum
PGSC0003DMG400012890 Solanum tuberosum
PGSC0003DMG400022111 Solanum tuberosum
PGSC0003DMG400028589 Solanum tuberosum
PGSC0003DMG400033842 Solanum tuberosum
Phvul.001G150700 Phaseolus vulgaris
Phvul.007G171800 Phaseolus vulgaris
Phvul.007G180300 Phaseolus vulgaris
Potri.005G033700 Populus trichocarpa
Potri.005G209000 Populus trichocarpa
Potri.013G023100 Populus trichocarpa
Pp3c10_1290 Physcomitrium patens
Pp3c14_1640 Physcomitrium patens
Pp3c16_16290 Physcomitrium patens
Pp3c1_31900 Physcomitrium patens
PRCOL_00001834 Prasinoderma coloniale
Prupe.6G326600 Prunus persica
Prupe.8G241500 Prunus persica
Psat3g064680 Pisum sativum
Psat6g060320 Pisum sativum
Psat6g151080 Pisum sativum
PSO210G2302 Papaver somniferum
PSO210G4986 Papaver somniferum
PSO832G1451 Papaver somniferum
QL01p053659 Quercus lobata
QL03p006918 Quercus lobata
QL12p021945 Quercus lobata
RcHm_v2.0_Chr3g0454681 Rosa chinensis
RcHm_v2.0_Chr6g0291101 Rosa chinensis
RcHm_v2.0_Chr6g0307301 Rosa chinensis
Rhsim05G0141900 Rhododendron simsii
Rhsim05G0142200 Rhododendron simsii
Rhsim13G0024400 Rhododendron simsii
Sabra02G0043600 Salix brachista
Sabra05G0035800 Salix brachista
Sabra05G0159100 Salix brachista
Sabra13G0025100 Salix brachista
SalBow2G3025 Salvia bowleyana
SalBow3G3557 Salvia bowleyana
SalBow4G2637 Salvia bowleyana
Sc16g0008450 Simmondsia chinensis
Sed0005461 Sechium edule
Sed0017328 Sechium edule
Sed0026911 Sechium edule
SEGI_03762 Sequoiadendron giganteum
SEGI_09036 Sequoiadendron giganteum
SEGI_15728 Sequoiadendron giganteum
SEGI_17444 Sequoiadendron giganteum
SEGI_20013 Sequoiadendron giganteum
SEGI_28692 Sequoiadendron giganteum
SEGI_37621 Sequoiadendron giganteum
SEGI_38636 Sequoiadendron giganteum
SEGI_38655 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00468 Striga asiatica
SGA_v2.0_scaffold302G47811 Striga asiatica
SGA_v2.0_scaffold53G19340 Striga asiatica
SMO146G0387 Selaginella moellendorffii
Solyc01g098920.4 Solanum lycopersicum
Solyc09g065130.4 Solanum lycopersicum
Sopen01g042460 Solanum pennellii
Sopen09g026850 Solanum pennellii
Sp2g20720 Schrenkiella parvula
Sp3g04170 Schrenkiella parvula
Sp5g00380 Schrenkiella parvula
TAR362G1169 Trochodendron aralioides
TAR365G0811 Trochodendron aralioides
THA.LOC104802802 Tarenaya hassleriana
THA.LOC104810659 Tarenaya hassleriana
THA.LOC104818693 Tarenaya hassleriana
THA.LOC104821711 Tarenaya hassleriana
THA.LOC104823048 Tarenaya hassleriana
THA.LOC104823092 Tarenaya hassleriana
Thecc.01G279900 Theobroma cacao
Thecc.05G304400 Theobroma cacao
Thhalv10003793m.g Eutrema salsugineum
Thhalv10005831m.g Eutrema salsugineum
Thhalv10020270m.g Eutrema salsugineum
TPR.G11458 Trifolium pratense
TPR.G13567 Trifolium pratense
TPR.G13574 Trifolium pratense
TPR.G13580 Trifolium pratense
TPR.G13592 Trifolium pratense
TPR.G13953 Trifolium pratense
TPR.G15795 Trifolium pratense
TPR.G21093 Trifolium pratense
TPR.G21998 Trifolium pratense
TPR.G29170 Trifolium pratense
TPR.G29171 Trifolium pratense
TPR.G38717 Trifolium pratense
TPR.G38726 Trifolium pratense
TPR.G38746 Trifolium pratense
TPR.G38772 Trifolium pratense
TPR.G38789 Trifolium pratense
TPR.G40303 Trifolium pratense
TPR.G6080 Trifolium pratense
TPR.G6156 Trifolium pratense
TPR.G7241 Trifolium pratense
TPR.G7242 Trifolium pratense
TPR.G9126 Trifolium pratense
TWI23G0833 Tripterygium wilfordii
TWI31G1012 Tripterygium wilfordii
TWI36G1001 Tripterygium wilfordii
TWI56G1494 Tripterygium wilfordii
unitig_22.g6908 Utricularia gibba
vmacro02567 Vaccinium macrocarpon
vmacro19625 Vaccinium macrocarpon
vmacro19626 Vaccinium macrocarpon
VMungo0331G1635 Vigna mungo
VMungo0720G1701 Vigna mungo
VMungo0720G3043 Vigna mungo
Zm00001eb062070 Zea mays
Zm00001eb212300 Zea mays

User provided reference genes

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