Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30130 Brassica napus
A02p10410 Brassica napus
A03p14710 Brassica napus
A06p07880 Brassica napus
A06p07890 Brassica napus
A09p16810 Brassica napus
A10p11590 Brassica napus
Aa31LG2G9360 Aethionema arabicum
Aa31LG3G10260 Aethionema arabicum
Actinidia01931 Actinidia chinensis
Actinidia05144 Actinidia chinensis
Actinidia05587 Actinidia chinensis
Actinidia09976 Actinidia chinensis
Actinidia39410 Actinidia chinensis
Ah.04g165430 Amaranthus hybridus
Ah.06g183580 Amaranthus hybridus
Ah.09g236050 Amaranthus hybridus
Ah.14g088970 Amaranthus hybridus
AL1G22240 Arabidopsis lyrata
AL1G22250 Arabidopsis lyrata
AL2G15050 Arabidopsis lyrata
AL8G29630 Arabidopsis lyrata
Aqoxy1G02755 Aquilegia oxysepala
Aqoxy4G01392 Aquilegia oxysepala
Aqoxy4G01397 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0V2WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C6SH89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWT1SW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQYB4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6F5YK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WL96AD Arachis hypogaea
AT1G11210 Arabidopsis thaliana
AT1G11220 Arabidopsis thaliana
AT1G11230 Arabidopsis thaliana
AT1G61260 Arabidopsis thaliana
AT5G54300 Arabidopsis thaliana
ATR0618G424 Amborella trichopoda
ATR0693G217 Amborella trichopoda
Atru.chr10.1993 Acer truncatum
Atru.chr2.2821 Acer truncatum
AUR62014728 Chenopodium quinoa
AUR62015603 Chenopodium quinoa
AUR62016910 Chenopodium quinoa
AUR62029314 Chenopodium quinoa
BcaB01g04291 Brassica carinata
BcaB04g20330 Brassica carinata
BcaB05g22126 Brassica carinata
BcaB07g31270 Brassica carinata
BcaB07g31271 Brassica carinata
BcaB08g35788 Brassica carinata
BcaC01g06301 Brassica carinata
BcaC03g14346 Brassica carinata
BcaC04g20347 Brassica carinata
BcaC04g22319 Brassica carinata
BcaC05g24985 Brassica carinata
BcaC05g24997 Brassica carinata
BcaC05g24998 Brassica carinata
BcaNung04471 Brassica carinata
BcaNung04473 Brassica carinata
BolC1t03784H Brassica oleracea
BolC2t07816H Brassica oleracea
BolC3t14133H Brassica oleracea
BolC5t29690H Brassica oleracea
BolC5t29691H Brassica oleracea
BolC9t54969H Brassica oleracea
BolC9t57340H Brassica oleracea
BraA01t03146Z Brassica rapa
BraA02t06107Z Brassica rapa
BraA03t10762Z Brassica rapa
BraA06t23987Z Brassica rapa
BraA06t23988Z Brassica rapa
BraA09t37318Z Brassica rapa
BraA10t43254Z Brassica rapa
C01p38220 Brassica napus
C02p17160 Brassica napus
C03p17190 Brassica napus
C05p09480 Brassica napus
C05p09490 Brassica napus
C09p19940 Brassica napus
C09p20720 Brassica napus
C09p44640 Brassica napus
CAN.G1181.20 Capsicum annuum
CAN.G162.103 Capsicum annuum
CANSAT11G1358 Cannabis sativa
CANSAT35G1846 Cannabis sativa
CANSAT64G1354 Cannabis sativa
CARHR011440 Cardamine hirsuta
CARHR011450 Cardamine hirsuta
CARHR051340 Cardamine hirsuta
CARHR267590 Cardamine hirsuta
CARHR267600 Cardamine hirsuta
Carub.0001s1080 Capsella rubella
Carub.0001s1081 Capsella rubella
Carub.0002s0389 Capsella rubella
Carub.0008s1465 Capsella rubella
Ca_00268_v3 Cicer arietinum L.
Ca_01806_v3 Cicer arietinum L.
Cc02_g12550 Coffea canephora
Cc04_g08580 Coffea canephora
Cc05_g12660 Coffea canephora
CDE01G0075 Ceratophyllum demersum
CDE02G2367 Ceratophyllum demersum
CDE04G2281 Ceratophyllum demersum
CDE05G0634 Ceratophyllum demersum
CDE05G1685 Ceratophyllum demersum
CDE05G2037 Ceratophyllum demersum
CDE05G3283 Ceratophyllum demersum
Cfa000364 Carpinus fangiana
Cfa017826 Carpinus fangiana
Cfa020506 Carpinus fangiana
Ciclev10008953m.g Citrus clementina
Ciclev10016038m.g Citrus clementina
Ciclev10021576m.g Citrus clementina
CiPaw.09G159200 Carya illinoinensis
CiPaw.11G176400 Carya illinoinensis
CiPaw.12G122700 Carya illinoinensis
CiPaw.15G093800 Carya illinoinensis
ClCG03G005570 Citrullus lanatus
ClCG04G012630 Citrullus lanatus
ClCG10G006530 Citrullus lanatus
ClCG11G018460 Citrullus lanatus
COL.COLO4_09477 Corchorus olitorius
Cpa.g.sc111.33 Carica papaya
Cpa.g.sc27.111 Carica papaya
Cpa.g.sc80.113 Carica papaya
CsaV3_1G005070 Cucumis sativus L.
CsaV3_1G011830 Cucumis sativus L.
CsaV3_3G005980 Cucumis sativus L.
CSS0030521 Camellia sinensis var. sinensis
DCAR_008703 Daucus carota
DCAR_009983 Daucus carota
DCAR_014747 Daucus carota
DCAR_022486 Daucus carota
DCAR_023250 Daucus carota
Dinv06414 Davidia involucrata
Dinv08340 Davidia involucrata
Dinv22367 Davidia involucrata
Dinv39808 Davidia involucrata
Dinv40504 Davidia involucrata
Duzib192G0891 Durio zibethinus
Duzib213G0072 Durio zibethinus
Duzib235G0541 Durio zibethinus
ECA234G2730 Erigeron canadensis
ECA236G4769 Erigeron canadensis
ECA248G2763 Erigeron canadensis
EL10Ac4g08062 Beta vulgaris
EL10Ac8g20619 Beta vulgaris
Eucgr.D00704 Eucalyptus grandis
Eucgr.D00705 Eucalyptus grandis
Eucgr.D00706 Eucalyptus grandis
Eucgr.D00707 Eucalyptus grandis
Eucgr.E03446 Eucalyptus grandis
Eucgr.F01080 Eucalyptus grandis
Eucgr.K02310 Eucalyptus grandis
FAN04G0889 Fragaria x ananassa
FAN08G0482 Fragaria x ananassa
FAN11G1051 Fragaria x ananassa
FAN11G1299 Fragaria x ananassa
FAN13G2451 Fragaria x ananassa
FAN16G1307 Fragaria x ananassa
FAN16G3443 Fragaria x ananassa
FAN18G3015 Fragaria x ananassa
FAN21G3887 Fragaria x ananassa
FAN21G3900 Fragaria x ananassa
FAN25G0355 Fragaria x ananassa
FAN25G1770 Fragaria x ananassa
FvH4_3g04160 Fragaria vesca
FvH4_3g20920 Fragaria vesca
FvH4_5g18290 Fragaria vesca
Glyma.09G165900 Glycine max
Glyma.12G219700 Glycine max
Glyma.13G245600 Glycine max
Glyma.13G281600 Glycine max
Glyma.16G215800 Glycine max
Gohir.A01G068400 Gossypium hirsutum
Gohir.A05G164700 Gossypium hirsutum
Gohir.A10G020200 Gossypium hirsutum
Gohir.D01G055700 Gossypium hirsutum
Gohir.D05G167700 Gossypium hirsutum
Gohir.D10G021000 Gossypium hirsutum
Gorai.002G075800 Gossypium raimondii
Gorai.009G172800 Gossypium raimondii
Gorai.011G022100 Gossypium raimondii
GSVIVG01006712001 Vitis vinifera
GSVIVG01014428001 Vitis vinifera
GSVIVG01029463001 Vitis vinifera
HanXRQChr04g0125161 Helianthus annuus
HanXRQChr11g0330851 Helianthus annuus
HanXRQChr16g0517791 Helianthus annuus
HanXRQChr17g0542451 Helianthus annuus
HanXRQChr17g0569171 Helianthus annuus
Haze_06561 Corylus avellana
Haze_09527 Corylus avellana
Haze_18384 Corylus avellana
Hma1.2p1_0144F.1_g064810 Hydrangea macrophylla
HPP92_012352 Vanilla planifolia
HPP92_014067 Vanilla planifolia
Hund21272 Selenicereus undatus
Hund28859 Selenicereus undatus
Hund28862 Selenicereus undatus
Lalb_Chr01g0017031 Lupinus albus
Lalb_Chr14g0370311 Lupinus albus
Lalb_Chr15g0090071 Lupinus albus
Lalb_Chr22g0353911 Lupinus albus
Lalb_Chr24g0398511 Lupinus albus
Lalb_Chr25g0286731 Lupinus albus
Lj1A1212G53 Lonicera japonica
Lj1A852G44 Lonicera japonica
Lj2A282T46 Lonicera japonica
Lj2g0021861 Lotus japonicus
Lj3g0003756 Lotus japonicus
Lj6g0007106 Lotus japonicus
Lsat_1_v5_gn_1_124741 Lactuca sativa
Lsat_1_v5_gn_4_57221 Lactuca sativa
Lsat_1_v5_gn_7_106460 Lactuca sativa
Lsat_1_v5_gn_7_19801 Lactuca sativa
Lsat_1_v5_gn_8_1621 Lactuca sativa
Manes.03G067600 Manihot esculenta
Manes.03G116400 Manihot esculenta
Manes.15G083300 Manihot esculenta
Manes.16G021700 Manihot esculenta
Manes.16G063300 Manihot esculenta
Manes.17G040000 Manihot esculenta
MBI02_g35911_MAGBIO Magnolia biondii
MBI03_g13831_MAGBIO Magnolia biondii
MBI06_g27494_MAGBIO Magnolia biondii
MD03G1219300 Malus domestica
MD05G1324300 Malus domestica
MD06G1238700 Malus domestica
MD10G1302100 Malus domestica
MD11G1237400 Malus domestica
MD14G1244900 Malus domestica
Medtr2g012320 Medicago truncatula
Medtr2g068770 Medicago truncatula
Medtr2g080980 Medicago truncatula
Medtr4g019980 Medicago truncatula
Medtr4g061040 Medicago truncatula
Medtr6g080600 Medicago truncatula
Medtr6g080650 Medicago truncatula
MELO3C001944.2 Cucumis melo
MELO3C002560.2 Cucumis melo
MELO3C016552.2 Cucumis melo
Migut.D02062 Erythranthe guttata
Migut.M00878 Erythranthe guttata
Migut.M01202 Erythranthe guttata
MSTRG.15208 Avicennia marina
MSTRG.15925 Avicennia marina
MSTRG.7298 Avicennia marina
Nitab4.5_0000297g0100 Nicotiana tabacum
Nitab4.5_0003465g0080 Nicotiana tabacum
Nitab4.5_0003574g0140 Nicotiana tabacum
Nitab4.5_0007109g0010 Nicotiana tabacum
Nitab4.5_0008144g0010 Nicotiana tabacum
Nitab4.5_0008686g0010 Nicotiana tabacum
Nn1g03919 Nelumbo nucifera
Nn1g06744 Nelumbo nucifera
Nn1g06892 Nelumbo nucifera
Nn1g08063 Nelumbo nucifera
Nn2g11887 Nelumbo nucifera
Nn3g16286 Nelumbo nucifera
Nn3g16445 Nelumbo nucifera
Nn3g18002 Nelumbo nucifera
Nn3g18595 Nelumbo nucifera
Nn4g25128 Nelumbo nucifera
Nn6g35669 Nelumbo nucifera
Nn6g35736 Nelumbo nucifera
Nn7g36083 Nelumbo nucifera
Nn8g38727 Nelumbo nucifera
Oeu016050.1 Olea europaea
Oeu016787.1 Olea europaea
Oeu019363.1 Olea europaea
Oeu038226.1 Olea europaea
Oeu043696.1 Olea europaea
Oeu053930.1 Olea europaea
Oeu055679.1 Olea europaea
Os07g0563400 Oryza sativa ssp. japonica
Peaxi162Scf00137g01111 Petunia axillaris
Peaxi162Scf00588g00078 Petunia axillaris
Peaxi162Scf01216g00045 Petunia axillaris
PGR004G0488 Punica granatum
PGR042G0663 Punica granatum
PGR044G1368 Punica granatum
PGR083G2642 Punica granatum
PGSC0003DMG400005036 Solanum tuberosum
PGSC0003DMG400019285 Solanum tuberosum
PGSC0003DMG400022414 Solanum tuberosum
Phvul.004G141400 Phaseolus vulgaris
Phvul.005G086300 Phaseolus vulgaris
Phvul.006G191200 Phaseolus vulgaris
Potri.001G406600 Populus trichocarpa
Potri.004G035700 Populus trichocarpa
Potri.011G044000 Populus trichocarpa
Potri.011G126900 Populus trichocarpa
Potri.012G037001 Populus trichocarpa
Potri.015G028700 Populus trichocarpa
Prupe.4G035700 Prunus persica
Prupe.4G189800 Prunus persica
Prupe.5G242600 Prunus persica
Psat1g121240 Pisum sativum
Psat1g208000 Pisum sativum
Psat5g246520 Pisum sativum
PSO063G3696 Papaver somniferum
PSO063G6251 Papaver somniferum
PSO210G0930 Papaver somniferum
PSO675G3502 Papaver somniferum
PSO782G0998 Papaver somniferum
PSO832G1914 Papaver somniferum
PSO832G3211 Papaver somniferum
QL05p081827 Quercus lobata
QL05p081841 Quercus lobata
QL08p018071 Quercus lobata
RcHm_v2.0_Chr5g0006611 Rosa chinensis
RcHm_v2.0_Chr5g0035351 Rosa chinensis
RcHm_v2.0_Chr7g0177291 Rosa chinensis
Rhsim03G0265500 Rhododendron simsii
Rhsim06G0193000 Rhododendron simsii
Rhsim13G0174000 Rhododendron simsii
Sabra04G0021500 Salix brachista
Sabra04G0021700 Salix brachista
Sabra11G0030500 Salix brachista
Sabra11G0110500 Salix brachista
Sabra12G0025500 Salix brachista
Sabra15G0023900 Salix brachista
Sabra16G0268000 Salix brachista
Sabra16G0270200 Salix brachista
Sabra16G0270300 Salix brachista
SalBow5G1491 Salvia bowleyana
SalBow7G0600 Salvia bowleyana
SalBow7G0775 Salvia bowleyana
SalBow8G0542 Salvia bowleyana
SalBow8G5059 Salvia bowleyana
Sc05g0008030 Simmondsia chinensis
Sc16g0006790 Simmondsia chinensis
Sc17g0006520 Simmondsia chinensis
Sc24g0000750 Simmondsia chinensis
Sed0001660 Sechium edule
Sed0006505 Sechium edule
Sed0007726 Sechium edule
Sed0018118 Sechium edule
Sed0022828 Sechium edule
Sed0026447 Sechium edule
SEGI_20526 Sequoiadendron giganteum
SEGI_27255 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37664 Striga asiatica
SGA_v2.0_scaffold34G13716 Striga asiatica
SGA_v2.0_scaffold73G24316 Striga asiatica
SGA_v2.0_scaffold7G03962 Striga asiatica
Solyc02g079010.4 Solanum lycopersicum
Solyc03g006620.3 Solanum lycopersicum
Solyc07g063560.4 Solanum lycopersicum
Sopen02g023820 Solanum pennellii
Sopen03g002630 Solanum pennellii
Sopen07g031740 Solanum pennellii
Sp1g09880 Schrenkiella parvula
Sp1g09890 Schrenkiella parvula
Sp2g03200 Schrenkiella parvula
Sp6g16340 Schrenkiella parvula
TAR371G1285 Trochodendron aralioides
TAR626G0635 Trochodendron aralioides
TAR627G0359 Trochodendron aralioides
TAR627G0733 Trochodendron aralioides
TAR629G3119 Trochodendron aralioides
TAR629G3218 Trochodendron aralioides
THA.LOC104809550 Tarenaya hassleriana
THA.LOC104813396 Tarenaya hassleriana
Thecc.06G197500 Theobroma cacao
Thecc.07G071500 Theobroma cacao
Thhalv10008322m.g Eutrema salsugineum
Thhalv10009955m.g Eutrema salsugineum
Thhalv10014064m.g Eutrema salsugineum
Thhalv10019471m.g Eutrema salsugineum
Thhalv10023538m.g Eutrema salsugineum
TPR.G19885 Trifolium pratense
TPR.G24074 Trifolium pratense
TPR.G2580 Trifolium pratense
TPR.G32866 Trifolium pratense
TPR.G36767 Trifolium pratense
TWI15G0707 Tripterygium wilfordii
TWI38G0775 Tripterygium wilfordii
TWI38G2165 Tripterygium wilfordii
TWI39G0097 Tripterygium wilfordii
TWI81G0059 Tripterygium wilfordii
unitig_37.g12577 Utricularia gibba
unitig_46.g18326 Utricularia gibba
unitig_85.g27403 Utricularia gibba
vmacro03829 Vaccinium macrocarpon
vmacro11814 Vaccinium macrocarpon
vmacro23296 Vaccinium macrocarpon
VMungo0464G0664 Vigna mungo
VMungo0540G1672 Vigna mungo
VMungo1080G1259 Vigna mungo
Zm00001eb106950 Zea mays
Zm00001eb324310 Zea mays

User provided reference genes

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