Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36570 Brassica napus
A03p25940 Brassica napus
A03p46940 Brassica napus
A04p13420 Brassica napus
A07p25970 Brassica napus
A09p07280 Brassica napus
A09p54370 Brassica napus
Aa31LG10G16330 Aethionema arabicum
Aa31LG11G2080 Aethionema arabicum
Aa31LG1G28680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2096 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.211 Anthoceros agrestis
Actinidia01504 Actinidia chinensis
Actinidia12155 Actinidia chinensis
Actinidia12156 Actinidia chinensis
Actinidia12157 Actinidia chinensis
Actinidia40391 Actinidia chinensis
Ah.03g133920 Amaranthus hybridus
Ah.06g188130 Amaranthus hybridus
Ah.06g188180 Amaranthus hybridus
Ah.06g188200 Amaranthus hybridus
AL1G10102 Arabidopsis lyrata
AL213U10010 Arabidopsis lyrata
AL4G38750 Arabidopsis lyrata
AL4G46940 Arabidopsis lyrata
AL5G45200 Arabidopsis lyrata
AL7G49510 Arabidopsis lyrata
AL8G37970 Arabidopsis lyrata
AL8G37990 Arabidopsis lyrata
Aqoxy2G02761 Aquilegia oxysepala
Aqoxy5G03220 Aquilegia oxysepala
Aqoxy7G00848 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5C2WXX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9U5AG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea
AT2G47380 Arabidopsis thaliana
AT5G40382 Arabidopsis thaliana
AT5G61310 Arabidopsis thaliana
AT5G61330 Arabidopsis thaliana
ATR0057G068 Amborella trichopoda
ATR0796G328 Amborella trichopoda
Atru.chr5.164 Acer truncatum
Atru.chr5.165 Acer truncatum
Atru.chr5.995 Acer truncatum
AUR62000394 Chenopodium quinoa
AUR62006750 Chenopodium quinoa
AUR62013726 Chenopodium quinoa
AUR62023428 Chenopodium quinoa
BcaB01g03169 Brassica carinata
BcaB02g07339 Brassica carinata
BcaB02g08779 Brassica carinata
BcaB04g19906 Brassica carinata
BcaB06g27497 Brassica carinata
BcaC01g05032 Brassica carinata
BcaC02g06970 Brassica carinata
BcaC02g06971 Brassica carinata
BcaC02g12570 Brassica carinata
BcaC04g23457 Brassica carinata
BcaC06g33228 Brassica carinata
BcaC06g33229 Brassica carinata
BcaC07g40724 Brassica carinata
BcaC07g42751 Brassica carinata
BcaC07g42754 Brassica carinata
BcaC08g45199 Brassica carinata
BolC3t15445H Brassica oleracea
BolC4t21690H Brassica oleracea
BolC4t26311H Brassica oleracea
BolC4t28756H Brassica oleracea
BolC6t37995H Brassica oleracea
BolC7t45021H Brassica oleracea
BolC8t51303H Brassica oleracea
BolC9t53726H Brassica oleracea
BraA02t08652Z Brassica rapa
BraA03t11811Z Brassica rapa
BraA03t13813Z Brassica rapa
BraA04t17000Z Brassica rapa
BraA07t30244Z Brassica rapa
BraA09t36377Z Brassica rapa
BraA09t40849Z Brassica rapa
C02p55530 Brassica napus
C03p30940 Brassica napus
C04p00560 Brassica napus
C04p47140 Brassica napus
C04p72750 Brassica napus
C06p28250 Brassica napus
C07p44980 Brassica napus
C08p37250 Brassica napus
C09p08140 Brassica napus
CAN.G100.81 Capsicum annuum
CAN.G1799.15 Capsicum annuum
CAN.G362.16 Capsicum annuum
CAN.G781.20 Capsicum annuum
CANSAT25G1899 Cannabis sativa
CANSAT25G3833 Cannabis sativa
CANSAT54G2114 Cannabis sativa
CANSAT56G0649 Cannabis sativa
CARHR054380 Cardamine hirsuta
CARHR142770 Cardamine hirsuta
CARHR172740 Cardamine hirsuta
CARHR261710 Cardamine hirsuta
CARHR275070 Cardamine hirsuta
CARHR275090 Cardamine hirsuta
Carub.0004s3010 Capsella rubella
Carub.0005s2912 Capsella rubella
Carub.0008s2199 Capsella rubella
Carub.0008s2200 Capsella rubella
Ca_04112_v3 Cicer arietinum L.
Ca_10254_v3 Cicer arietinum L.
Ca_10282_v3 Cicer arietinum L.
CBR_g1066 Chara braunii
CBR_g1068 Chara braunii
CBR_g30759 Chara braunii
Cc01_g21450 Coffea canephora
Cc02_g24880 Coffea canephora
Cc07_g01900 Coffea canephora
CDE03G0227 Ceratophyllum demersum
Cfa005793 Carpinus fangiana
Cfa007397 Carpinus fangiana
Cfa011091 Carpinus fangiana
Cfa024988 Carpinus fangiana
Ciclev10015475m.g Citrus clementina
Ciclev10017383m.g Citrus clementina
CiPaw.04G027200 Carya illinoinensis
CiPaw.07G117700 Carya illinoinensis
CiPaw.14G021800 Carya illinoinensis
ClCG05G000380 Citrullus lanatus
ClCG09G005070 Citrullus lanatus
ClCG10G014000 Citrullus lanatus
COL.COLO4_23229 Corchorus olitorius
COL.COLO4_25944 Corchorus olitorius
Cpa.g.c42599 Carica papaya
Cpa.g.sc116.74 Carica papaya
Cpa.g.sc18.46 Carica papaya
Cre13.g587000 Chlamydomonas reinhardtii
CsaV3_3G007540 Cucumis sativus L.
CsaV3_7G029980 Cucumis sativus L.
CSS0006822 Camellia sinensis var. sinensis
CSS0009308 Camellia sinensis var. sinensis
CSS0022011 Camellia sinensis var. sinensis
DCAR_002894 Daucus carota
DCAR_012353 Daucus carota
DCAR_018297 Daucus carota
DCAR_021711 Daucus carota
DCAR_023354 Daucus carota
DCAR_029773 Daucus carota
Dinv43635 Davidia involucrata
Dinv44076 Davidia involucrata
Duzib132G0757 Durio zibethinus
Duzib133G1031 Durio zibethinus
Duzib138G0638 Durio zibethinus
Duzib211G0439 Durio zibethinus
Duzib248G1310 Durio zibethinus
ECA234G3220 Erigeron canadensis
EL10Ac1g00784 Beta vulgaris
Eucgr.F04452 Eucalyptus grandis
Eucgr.J02226 Eucalyptus grandis
Eucgr.K03546 Eucalyptus grandis
FAN01G0763 Fragaria x ananassa
FAN01G1872 Fragaria x ananassa
FAN01G2961 Fragaria x ananassa
FAN02G1877 Fragaria x ananassa
FAN03G0737 Fragaria x ananassa
FAN03G2111 Fragaria x ananassa
FAN06G2650 Fragaria x ananassa
FAN06G3795 Fragaria x ananassa
FAN06G4046 Fragaria x ananassa
FAN06G4261 Fragaria x ananassa
FAN06G4892 Fragaria x ananassa
FAN08G0348 Fragaria x ananassa
FAN10G1788 Fragaria x ananassa
FAN10G2339 Fragaria x ananassa
FAN14G1074 Fragaria x ananassa
FAN18G1380 Fragaria x ananassa
FvH4_5g39150 Fragaria vesca
FvH4_6g51092 Fragaria vesca
FvH4_7g09370 Fragaria vesca
FvH4_7g09810 Fragaria vesca
Glyma.02G012400 Glycine max
Glyma.03G219600 Glycine max
Glyma.09G089400 Glycine max
Glyma.10G012800 Glycine max
Glyma.18G253900 Glycine max
Gohir.A07G128700 Gossypium hirsutum
Gohir.A08G119400 Gossypium hirsutum
Gohir.A13G033800 Gossypium hirsutum
Gohir.D07G133100 Gossypium hirsutum
Gohir.D08G140300 Gossypium hirsutum
Gohir.D13G032100 Gossypium hirsutum
Gorai.001G144400 Gossypium raimondii
Gorai.004G144400 Gossypium raimondii
Gorai.013G036600 Gossypium raimondii
GSVIVG01018246001 Vitis vinifera
GSVIVG01031242001 Vitis vinifera
GSVIVG01032434001 Vitis vinifera
HanXRQChr01g0007441 Helianthus annuus
HanXRQChr14g0428901 Helianthus annuus
HanXRQChr17g0555681 Helianthus annuus
Haze_09299 Corylus avellana
Haze_17173 Corylus avellana
Hma1.2p1_1394F.1_g280380 Hydrangea macrophylla
Hma1.2p1_1394F.1_g280390 Hydrangea macrophylla
HPP92_011727 Vanilla planifolia
HPP92_024242 Vanilla planifolia
Hund09633 Selenicereus undatus
Hund17077 Selenicereus undatus
Lalb_Chr02g0146831 Lupinus albus
Lalb_Chr06g0166881 Lupinus albus
Lalb_Chr19g0127051 Lupinus albus
Lj5g0025307 Lotus japonicus
Lj9C558G6 Lonicera japonica
LjContig00564g0006049 Lotus japonicus
Lsat_1_v5_gn_3_12840 Lactuca sativa
Lsat_1_v5_gn_4_15080 Lactuca sativa
Lsat_1_v5_gn_4_70960 Lactuca sativa
Manes.01G228000 Manihot esculenta
Manes.01G272000 Manihot esculenta
Manes.05G003700 Manihot esculenta
Manes.05G069800 Manihot esculenta
Manes.17G114500 Manihot esculenta
Mapoly0029s0122 Marchantia polymorpha
Mapoly0107s0003 Marchantia polymorpha
MBI04_g36329_MAGBIO Magnolia biondii
MBI07_g31080_MAGBIO Magnolia biondii
MBI10_g27628_MAGBIO Magnolia biondii
MBI16_g05477_MAGBIO Magnolia biondii
MCO04G285 Micromonas commoda
MD00G1179300 Malus domestica
MD02G1217000 Malus domestica
MD02G1263900 Malus domestica
MD02G1264000 Malus domestica
MD02G1264200 Malus domestica
MD03G1294600 Malus domestica
MD04G1041800 Malus domestica
MD04G1152800 Malus domestica
MD07G1073400 Malus domestica
MD07G1101900 Malus domestica
MD07G1102000 Malus domestica
MD07G1102300 Malus domestica
MD07G1103300 Malus domestica
MD08G1040900 Malus domestica
Medtr1g087020 Medicago truncatula
Medtr5g064850 Medicago truncatula
Medtr7g007890 Medicago truncatula
Medtr7g109540 Medicago truncatula
MELO3C005976.2 Cucumis melo
MELO3C015922.2 Cucumis melo
Migut.H00090 Erythranthe guttata
Migut.J01567 Erythranthe guttata
Migut.K00176 Erythranthe guttata
Migut.N01781 Erythranthe guttata
MSTRG.12501 Avicennia marina
Nitab4.5_0000914g0150 Nicotiana tabacum
Nitab4.5_0002682g0040 Nicotiana tabacum
Nitab4.5_0003540g0050 Nicotiana tabacum
Nitab4.5_0006891g0020 Nicotiana tabacum
Nitab4.5_0008277g0050 Nicotiana tabacum
Nitab4.5_0009078g0020 Nicotiana tabacum
Nitab4.5_0010229g0010 Nicotiana tabacum
Nitab4.5_0010229g0020 Nicotiana tabacum
Nn2g15672 Nelumbo nucifera
Nn3g16793 Nelumbo nucifera
Nn6g33853 Nelumbo nucifera
Nn6g35641 Nelumbo nucifera
Nn8g38542 Nelumbo nucifera
Oeu009510.1 Olea europaea
Oeu021020.1 Olea europaea
Oeu021607.1 Olea europaea
Oeu044226.1 Olea europaea
Oeu048627.1 Olea europaea
Oeu051899.1 Olea europaea
Os01g0526200 Oryza sativa ssp. japonica
Os12g0561000 Oryza sativa ssp. japonica
Peaxi162Scf00392g00227 Petunia axillaris
Peaxi162Scf00691g00211 Petunia axillaris
Peaxi162Scf00750g00019 Petunia axillaris
PGR031G2794 Punica granatum
PGR044G0102 Punica granatum
PGR083G0830 Punica granatum
PGR142G3219 Punica granatum
PGSC0003DMG400000480 Solanum tuberosum
PGSC0003DMG400009043 Solanum tuberosum
PGSC0003DMG400017823 Solanum tuberosum
PGSC0003DMG400026041 Solanum tuberosum
Phvul.001G213100 Phaseolus vulgaris
Phvul.007G214100 Phaseolus vulgaris
Phvul.008G045000 Phaseolus vulgaris
Potri.002G195901 Populus trichocarpa
Potri.014G120500 Populus trichocarpa
Potri.019G085100 Populus trichocarpa
Pp3c15_22760 Physcomitrium patens
Pp3c5_7370 Physcomitrium patens
Pp3c9_23880 Physcomitrium patens
PRCOL_00000960 Prasinoderma coloniale
PRCOL_00005874 Prasinoderma coloniale
Prupe.1G195500 Prunus persica
Prupe.2G127200 Prunus persica
Prupe.3G288700 Prunus persica
Prupe.4G256600 Prunus persica
Prupe.8G266700 Prunus persica
Psat0s3614g0040 Pisum sativum
Psat6g161560 Pisum sativum
PSO017G3357 Papaver somniferum
PSO063G3532 Papaver somniferum
PSO170G6800 Papaver somniferum
PSO210G6403 Papaver somniferum
PSO478G3602 Papaver somniferum
PSO541G3735 Papaver somniferum
PSO761G0387 Papaver somniferum
QL01p011221 Quercus lobata
QL04p031108 Quercus lobata
QL06p051825 Quercus lobata
RcHm_v2.0_Chr1g0346971 Rosa chinensis
RcHm_v2.0_Chr2g0172621 Rosa chinensis
RcHm_v2.0_Chr5g0055711 Rosa chinensis
RcHm_v2.0_Chr7g0241161 Rosa chinensis
RcHm_v2.0_Chr7g0241221 Rosa chinensis
Rhsim01G0291000 Rhododendron simsii
Rhsim05G0127000 Rhododendron simsii
Rhsim07G0034600 Rhododendron simsii
Rhsim08G0052200 Rhododendron simsii
Sabra01G0055500 Salix brachista
Sabra02G0161100 Salix brachista
Sabra03G0104500 Salix brachista
Sabra08G0062700 Salix brachista
Sabra17G0004200 Salix brachista
Sabra19G0096200 Salix brachista
SabraUnG0001700 Salix brachista
SalBow1G2549 Salvia bowleyana
SalBow1G7233 Salvia bowleyana
SalBow6G5432 Salvia bowleyana
SalBow6G6007 Salvia bowleyana
Sc02g0002980 Simmondsia chinensis
Sc06g0005750 Simmondsia chinensis
Sc16g0003260 Simmondsia chinensis
Sed0004454 Sechium edule
Sed0013650 Sechium edule
Sed0021805 Sechium edule
SEGI_02026 Sequoiadendron giganteum
SEGI_02450 Sequoiadendron giganteum
SEGI_12976 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34466 Striga asiatica
SGA_v2.0_scaffold481G52323 Striga asiatica
SGA_v2.0_scaffold5G02962 Striga asiatica
SHI03505 Sapria himalayana
SHI13740 Sapria himalayana
SMO141G0070 Selaginella moellendorffii
SMO367G0962 Selaginella moellendorffii
Solyc01g079420.4 Solanum lycopersicum
Solyc01g090470.3 Solanum lycopersicum
Solyc02g150141.1 Solanum lycopersicum
Solyc10g045580.1 Solanum lycopersicum
Sopen00g002690 Solanum pennellii
Sopen01g036260 Solanum pennellii
Sp2g24530 Schrenkiella parvula
Sp2g24540 Schrenkiella parvula
Sp4g29320 Schrenkiella parvula
Sp5g01010 Schrenkiella parvula
TAR362G0726 Trochodendron aralioides
TAR629G0136 Trochodendron aralioides
TAR633G2781 Trochodendron aralioides
TAR636G3630 Trochodendron aralioides
THA.LOC104800344 Tarenaya hassleriana
THA.LOC104805381 Tarenaya hassleriana
THA.LOC104818326 Tarenaya hassleriana
THA.LOC104827668 Tarenaya hassleriana
THA.LOC109116197 Tarenaya hassleriana
Thecc.01G313800 Theobroma cacao
Thecc.02G084000 Theobroma cacao
Thhalv10001714m.g Eutrema salsugineum
Thhalv10004255m.g Eutrema salsugineum
Thhalv10006359m.g Eutrema salsugineum
Thhalv10020921m.g Eutrema salsugineum
TPR.G11809 Trifolium pratense
TPR.G23953 Trifolium pratense
TPR.G38671 Trifolium pratense
TWI12G0355 Tripterygium wilfordii
TWI23G0567 Tripterygium wilfordii
TWI75G1808 Tripterygium wilfordii
unitig_21.g20668 Utricularia gibba
unitig_744.g24162 Utricularia gibba
vmacro02404 Vaccinium macrocarpon
vmacro16776 Vaccinium macrocarpon
VMungo1383G3402 Vigna mungo
Zm00001eb028440 Zea mays
Zm00001eb127190 Zea mays
Zm00001eb333990 Zea mays

User provided reference genes

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