Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09590 Brassica napus
A03p62380 Brassica napus
A06p48020 Brassica napus
A09p10620 Brassica napus
A09p10630 Brassica napus
A10p19970 Brassica napus
Aa31LG1G14230 Aethionema arabicum
Aa31LG8G12920 Aethionema arabicum
Aa31LG9G13230 Aethionema arabicum
Aa31sc14G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_120.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1479 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1749 Anthoceros agrestis
Actinidia00386 Actinidia chinensis
Actinidia00387 Actinidia chinensis
Actinidia08254 Actinidia chinensis
Actinidia12277 Actinidia chinensis
Actinidia17977 Actinidia chinensis
Actinidia25420 Actinidia chinensis
Actinidia37865 Actinidia chinensis
Ah.04g150380 Amaranthus hybridus
Ah.09g231990 Amaranthus hybridus
Ah.13g077340 Amaranthus hybridus
AL3G46640 Arabidopsis lyrata
AL6G31270 Arabidopsis lyrata
AL7G17530 Arabidopsis lyrata
AL8G17520 Arabidopsis lyrata
Aqoxy4G00837 Aquilegia oxysepala
Aqoxy6G02722 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36JDZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76KEHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D0YQCK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6RXR7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX1GHC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PDFB0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU41E3 Arachis hypogaea
AT2G14860 Arabidopsis thaliana
AT4G33905 Arabidopsis thaliana
AT5G19750 Arabidopsis thaliana
AT5G43140 Arabidopsis thaliana
ATR0030G007 Amborella trichopoda
ATR0807G098 Amborella trichopoda
ATR1096G055 Amborella trichopoda
Atru.chr1.1514 Acer truncatum
Atru.chr13.810 Acer truncatum
Atru.chr5.2409 Acer truncatum
AUR62018431 Chenopodium quinoa
AUR62021002 Chenopodium quinoa
AUR62022506 Chenopodium quinoa
AUR62037456 Chenopodium quinoa
BcaB01g04834 Brassica carinata
BcaB03g16219 Brassica carinata
BcaB07g31801 Brassica carinata
BcaB07g31802 Brassica carinata
BcaB08g36571 Brassica carinata
BcaC04g19373 Brassica carinata
BcaC04g23056 Brassica carinata
BcaC04g23057 Brassica carinata
BcaC04g23058 Brassica carinata
BcaC04g23059 Brassica carinata
BcaC06g31720 Brassica carinata
BcaC06g34679 Brassica carinata
BcaC06g36025 Brassica carinata
BcaNung02910 Brassica carinata
BcaNung04332 Brassica carinata
BolC3t13586H Brassica oleracea
BolC7t41295H Brassica oleracea
BolC7t43089H Brassica oleracea
BolC7t46443H Brassica oleracea
BolC9t54151H Brassica oleracea
BolC9t54152H Brassica oleracea
BraA03t10276Z Brassica rapa
BraA03t15294Z Brassica rapa
BraA06t27672Z Brassica rapa
BraA09t36704Z Brassica rapa
BraA09t36705Z Brassica rapa
BraA10t44072Z Brassica rapa
C03p11160 Brassica napus
C07p08820 Brassica napus
C07p25700 Brassica napus
C07p60010 Brassica napus
C09p12600 Brassica napus
C09p12610 Brassica napus
CAN.G107.2 Capsicum annuum
CAN.G606.44 Capsicum annuum
CAN.G724.6 Capsicum annuum
CAN.G929.17 Capsicum annuum
CANSAT25G0864 Cannabis sativa
CANSAT64G1525 Cannabis sativa
CARHR180800 Cardamine hirsuta
CARHR193150 Cardamine hirsuta
CARHR233770 Cardamine hirsuta
CARHR241990 Cardamine hirsuta
CARHR284870 Cardamine hirsuta
Carub.0003s2885 Capsella rubella
Carub.0006s1810 Capsella rubella
Carub.0007s0654 Capsella rubella
Carub.0008s0558 Capsella rubella
Ca_08353_v3 Cicer arietinum L.
Ca_11045_v3 Cicer arietinum L.
Ca_28614_v3 Cicer arietinum L.
CBR_g29303 Chara braunii
CBR_g31674 Chara braunii
Cc02_g19630 Coffea canephora
Cc02_g30170 Coffea canephora
Cc02_g31590 Coffea canephora
Cc09_g07680 Coffea canephora
Cc10_g05600 Coffea canephora
CDE04G1755 Ceratophyllum demersum
CDE07G0099 Ceratophyllum demersum
Cfa013674 Carpinus fangiana
Cfa019944 Carpinus fangiana
Cfa019945 Carpinus fangiana
Ciclev10002167m.g Citrus clementina
Ciclev10012325m.g Citrus clementina
Ciclev10028778m.g Citrus clementina
CiPaw.05G015600 Carya illinoinensis
CiPaw.06G167300 Carya illinoinensis
CiPaw.10G044200 Carya illinoinensis
ClCG08G016380 Citrullus lanatus
ClCG10G010540 Citrullus lanatus
ClCG10G016490 Citrullus lanatus
COL.COLO4_06867 Corchorus olitorius
COL.COLO4_28528 Corchorus olitorius
COL.COLO4_32541 Corchorus olitorius
Cpa.g.sc106.77 Carica papaya
Cpa.g.sc21.104 Carica papaya
Cpa.g.sc21.105 Carica papaya
Cpa.g.sc32.148 Carica papaya
Cpa.g.sc33.192 Carica papaya
Cre04.g217946 Chlamydomonas reinhardtii
Cre06.g278800 Chlamydomonas reinhardtii
CsaV3_2G026230 Cucumis sativus L.
CsaV3_3G039850 Cucumis sativus L.
CsaV3_4G000460 Cucumis sativus L.
CSS0026428 Camellia sinensis var. sinensis
CSS0034661 Camellia sinensis var. sinensis
CSS0035445 Camellia sinensis var. sinensis
CSS0040401 Camellia sinensis var. sinensis
CSS0047526 Camellia sinensis var. sinensis
DCAR_014752 Daucus carota
DCAR_021963 Daucus carota
DCAR_023242 Daucus carota
Dinv10882 Davidia involucrata
Dinv15792 Davidia involucrata
Dinv39246 Davidia involucrata
Dinv44972 Davidia involucrata
Duzib052G0877 Durio zibethinus
Duzib116G0780 Durio zibethinus
Duzib128G0040 Durio zibethinus
Duzib248G0574 Durio zibethinus
ECA236G2952 Erigeron canadensis
ECA240G0101 Erigeron canadensis
ECA247G0763 Erigeron canadensis
EL10Ac3g07334 Beta vulgaris
EL10Ac8g19364 Beta vulgaris
EL10As7g23806 Beta vulgaris
Eucgr.F02265 Eucalyptus grandis
Eucgr.I01077 Eucalyptus grandis
Eucgr.K01688 Eucalyptus grandis
FAN15G2970 Fragaria x ananassa
FAN20G1221 Fragaria x ananassa
FAN23G2036 Fragaria x ananassa
FAN24G2956 Fragaria x ananassa
FAN26G0675 Fragaria x ananassa
FAN27G2332 Fragaria x ananassa
FvH4_1g28950 Fragaria vesca
FvH4_2g03950 Fragaria vesca
Glyma.02G076200 Glycine max
Glyma.10G258700 Glycine max
Glyma.16G158300 Glycine max
Glyma.19G125200 Glycine max
Glyma.20G132500 Glycine max
Gohir.A05G208200 Gossypium hirsutum
Gohir.A08G014100 Gossypium hirsutum
Gohir.A13G045700 Gossypium hirsutum
Gohir.D01G152350 Gossypium hirsutum
Gohir.D05G211700 Gossypium hirsutum
Gohir.D08G020700 Gossypium hirsutum
Gohir.D13G044700 Gossypium hirsutum
Gorai.002G188700 Gossypium raimondii
Gorai.004G020000 Gossypium raimondii
Gorai.009G218300 Gossypium raimondii
Gorai.013G049500 Gossypium raimondii
GSVIVG01009364001 Vitis vinifera
GSVIVG01025824001 Vitis vinifera
GSVIVG01037862001 Vitis vinifera
HanXRQChr01g0003271 Helianthus annuus
HanXRQChr03g0070021 Helianthus annuus
HanXRQChr15g0492071 Helianthus annuus
HanXRQChr16g0509041 Helianthus annuus
Haze_20294 Corylus avellana
Hma1.2p1_0210F.1_g089640 Hydrangea macrophylla
HPP92_004128 Vanilla planifolia
HPP92_020458 Vanilla planifolia
HPP92_021254 Vanilla planifolia
HPP92_026176 Vanilla planifolia
Hund12616 Selenicereus undatus
Hund19064 Selenicereus undatus
Hund24515 Selenicereus undatus
Lalb_Chr06g0165261 Lupinus albus
Lalb_Chr14g0365401 Lupinus albus
Lalb_Chr19g0129891 Lupinus albus
Lalb_Chr21g0308161 Lupinus albus
Lj1g0012111 Lotus japonicus
Lj2g0023015 Lotus japonicus
Lj4A760T39 Lonicera japonica
Lj4C69T4 Lonicera japonica
Lj4P760T34 Lonicera japonica
Lj5A167T35 Lonicera japonica
Lj5g0021743 Lotus japonicus
Lj9A326G74 Lonicera japonica
Lj9C326T7 Lonicera japonica
Lsat_1_v5_gn_0_10441 Lactuca sativa
Lsat_1_v5_gn_1_22761 Lactuca sativa
Lsat_1_v5_gn_7_85641 Lactuca sativa
Lsat_1_v5_gn_9_111641 Lactuca sativa
Lsat_1_v5_gn_9_112320 Lactuca sativa
Manes.07G063442 Manihot esculenta
Manes.08G065800 Manihot esculenta
Manes.18G044700 Manihot esculenta
Mapoly0001s0503 Marchantia polymorpha
Mapoly0101s0003 Marchantia polymorpha
MBI13_g13128_MAGBIO Magnolia biondii
MBI16_g37194_MAGBIO Magnolia biondii
MBI16_g41466_MAGBIO Magnolia biondii
MBI16_g47632_MAGBIO Magnolia biondii
MCO11G168 Micromonas commoda
MD05G1096500 Malus domestica
MD10G1102900 Malus domestica
MD12G1111600 Malus domestica
MD14G1100800 Malus domestica
Medtr1g106775 Medicago truncatula
Medtr2g009000 Medicago truncatula
Medtr6g038540 Medicago truncatula
Medtr6g038550 Medicago truncatula
Medtr7g088590 Medicago truncatula
MELO3C009727.2 Cucumis melo
MELO3C010815.2 Cucumis melo
MELO3C017989.2 Cucumis melo
Migut.B00423 Erythranthe guttata
Migut.D02067 Erythranthe guttata
Migut.N01152 Erythranthe guttata
Migut.N02767 Erythranthe guttata
Migut.O00269 Erythranthe guttata
Migut.O00680 Erythranthe guttata
MSTRG.16691 Avicennia marina
MSTRG.22229 Avicennia marina
MSTRG.5330 Avicennia marina
MSTRG.9715 Avicennia marina
Nitab4.5_0000088g0110 Nicotiana tabacum
Nitab4.5_0000569g0040 Nicotiana tabacum
Nitab4.5_0000782g0020 Nicotiana tabacum
Nitab4.5_0000934g0070 Nicotiana tabacum
Nitab4.5_0000934g0100 Nicotiana tabacum
Nitab4.5_0001105g0240 Nicotiana tabacum
Nitab4.5_0003040g0100 Nicotiana tabacum
Nitab4.5_0003228g0020 Nicotiana tabacum
Nitab4.5_0004495g0020 Nicotiana tabacum
Nitab4.5_0004685g0070 Nicotiana tabacum
Nitab4.5_0014410g0010 Nicotiana tabacum
Nn1g04613 Nelumbo nucifera
Nn5g30525 Nelumbo nucifera
Nn7g37072 Nelumbo nucifera
Oeu010417.1 Olea europaea
Oeu037264.2 Olea europaea
Oeu063717.1 Olea europaea
Os11g0131200 Oryza sativa ssp. japonica
Os12g0127900 Oryza sativa ssp. japonica
Os12g0508100 Oryza sativa ssp. japonica
Peaxi162Scf00016g02734 Petunia axillaris
Peaxi162Scf00081g01320 Petunia axillaris
Peaxi162Scf00152g00337 Petunia axillaris
Peaxi162Scf00160g00119 Petunia axillaris
Peaxi162Scf00171g00251 Petunia axillaris
PGR142G2115 Punica granatum
PGSC0003DMG400000866 Solanum tuberosum
PGSC0003DMG400010174 Solanum tuberosum
PGSC0003DMG400025847 Solanum tuberosum
PGSC0003DMG401000911 Solanum tuberosum
PGSC0003DMG402000911 Solanum tuberosum
PGSC0003DMG402011559 Solanum tuberosum
Phvul.001G116800 Phaseolus vulgaris
Phvul.004G086700 Phaseolus vulgaris
Phvul.007G043600 Phaseolus vulgaris
Potri.001G296400 Populus trichocarpa
Potri.006G032500 Populus trichocarpa
Potri.009G090600 Populus trichocarpa
Potri.014G017800 Populus trichocarpa
Potri.016G029700 Populus trichocarpa
Pp3c11_2220 Physcomitrium patens
Pp3c15_810 Physcomitrium patens
Pp3c18_10610 Physcomitrium patens
Pp3c23_9880 Physcomitrium patens
Pp3c8_1860 Physcomitrium patens
PRCOL_00001315 Prasinoderma coloniale
Prupe.7G022300 Prunus persica
Prupe.8G141000 Prunus persica
Psat0ss9348g0040 Pisum sativum
Psat1g101200 Pisum sativum
Psat6g215720 Pisum sativum
PSO017G4912 Papaver somniferum
PSO339G5762 Papaver somniferum
PSO384G2730 Papaver somniferum
QL07p014182 Quercus lobata
QL11p031864 Quercus lobata
QL12p037626 Quercus lobata
RcHm_v2.0_Chr3g0494371 Rosa chinensis
RcHm_v2.0_Chr6g0253001 Rosa chinensis
Rhsim07G0221600 Rhododendron simsii
Rhsim11G0154500 Rhododendron simsii
RhsimUnG0020800 Rhododendron simsii
RhsimUnG0125700 Rhododendron simsii
Sabra06G0021700 Salix brachista
Sabra09G0070100 Salix brachista
Sabra14G0011700 Salix brachista
Sabra16G0033600 Salix brachista
Sabra16G0185500 Salix brachista
SalBow3G3490 Salvia bowleyana
SalBow5G3943 Salvia bowleyana
SalBow6G5686 Salvia bowleyana
SalBow7G2613 Salvia bowleyana
SalBow8G4834 Salvia bowleyana
Sc15g0005570 Simmondsia chinensis
Sc15g0005750 Simmondsia chinensis
Sc18g0003660 Simmondsia chinensis
Sc19g0007890 Simmondsia chinensis
Sed0001701 Sechium edule
Sed0012151 Sechium edule
Sed0015895 Sechium edule
Sed0018982 Sechium edule
SEGI_02823 Sequoiadendron giganteum
SEGI_09799 Sequoiadendron giganteum
SEGI_15989 Sequoiadendron giganteum
SGA_v2.0_scaffold103G30042 Striga asiatica
SGA_v2.0_scaffold225G43017 Striga asiatica
SGA_v2.0_scaffold28G11817 Striga asiatica
SGA_v2.0_scaffold32G13013 Striga asiatica
SGA_v2.0_scaffold90G27743 Striga asiatica
SHI05090 Sapria himalayana
SMO340G0056 Selaginella moellendorffii
SMO358G0404 Selaginella moellendorffii
Solyc01g107240.4 Solanum lycopersicum
Solyc03g098640.4 Solanum lycopersicum
Solyc04g078040.3 Solanum lycopersicum
Solyc11g012990.1 Solanum lycopersicum
Solyc12g088420.2 Solanum lycopersicum
Sopen01g049490 Solanum pennellii
Sopen03g029350 Solanum pennellii
Sopen04g031630 Solanum pennellii
Sopen11g007710 Solanum pennellii
Sopen12g030400 Solanum pennellii
Sp2g07920 Schrenkiella parvula
Sp3g28110 Schrenkiella parvula
Sp3g28220 Schrenkiella parvula
Sp6g24640 Schrenkiella parvula
Sp7g31630 Schrenkiella parvula
TAR381G1276 Trochodendron aralioides
TAR623G1603 Trochodendron aralioides
TAR625G0291 Trochodendron aralioides
THA.LOC104799686 Tarenaya hassleriana
THA.LOC104807224 Tarenaya hassleriana
THA.LOC104812587 Tarenaya hassleriana
THA.LOC104819536 Tarenaya hassleriana
Thecc.02G113900 Theobroma cacao
Thecc.05G119800 Theobroma cacao
Thecc.08G091200 Theobroma cacao
Thhalv10003259m.g Eutrema salsugineum
Thhalv10014288m.g Eutrema salsugineum
Thhalv10022819m.g Eutrema salsugineum
Thhalv10022822m.g Eutrema salsugineum
Thhalv10025993m.g Eutrema salsugineum
TPR.G16201 Trifolium pratense
TPR.G27086 Trifolium pratense
TPR.G27970 Trifolium pratense
TWI12G0996 Tripterygium wilfordii
TWI14G1255 Tripterygium wilfordii
TWI59G0414 Tripterygium wilfordii
TWI74G0653 Tripterygium wilfordii
unitig_26.g10114 Utricularia gibba
unitig_26.g10115 Utricularia gibba
unitig_578.g16138 Utricularia gibba
unitig_61.g26036 Utricularia gibba
unitig_749.g13719 Utricularia gibba
vmacro01973 Vaccinium macrocarpon
vmacro07590 Vaccinium macrocarpon
vmacro22068 Vaccinium macrocarpon
vmacro22794 Vaccinium macrocarpon
VMungo0331G0742 Vigna mungo
VMungo0464G0082 Vigna mungo
VMungo0464G1418 Vigna mungo
VMungo0720G1565 Vigna mungo
Zm00001eb138000 Zea mays
Zm00001eb195970 Zea mays
Zm00001eb264730 Zea mays

User provided reference genes

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