Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23680 Brassica napus
A03p22550 Brassica napus
A04p30080 Brassica napus
A06p01650 Brassica napus
A06p11550 Brassica napus
A07p22690 Brassica napus
A09p48860 Brassica napus
Aa31LG10G2290 Aethionema arabicum
Aa31LG4G560 Aethionema arabicum
Aa31LG5G19510 Aethionema arabicum
Actinidia00946 Actinidia chinensis
Actinidia01774 Actinidia chinensis
Actinidia13934 Actinidia chinensis
Actinidia15809 Actinidia chinensis
Ah.01g020970 Amaranthus hybridus
Ah.16g103460 Amaranthus hybridus
AL1G27610 Arabidopsis lyrata
AL1G61070 Arabidopsis lyrata
AL2G41220 Arabidopsis lyrata
AL4G37740 Arabidopsis lyrata
AL5G37170 Arabidopsis lyrata
Aqoxy4G02578 Aquilegia oxysepala
Aqoxy7G01988 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.01DT97 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2VU9BG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62DI5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8612F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MMYB4K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WYEN9E Arachis hypogaea
AT1G15490 Arabidopsis thaliana
AT1G52750 Arabidopsis thaliana
AT1G80280 Arabidopsis thaliana
AT2G40095 Arabidopsis thaliana
AT3G55880 Arabidopsis thaliana
ATR0661G149 Amborella trichopoda
ATR0716G028 Amborella trichopoda
Atru.chr1.3156 Acer truncatum
Atru.chr1.3158 Acer truncatum
Atru.chr12.25 Acer truncatum
AUR62011590 Chenopodium quinoa
AUR62012240 Chenopodium quinoa
AUR62016405 Chenopodium quinoa
BcaB01g00052 Brassica carinata
BcaB01g00055 Brassica carinata
BcaB02g07673 Brassica carinata
BcaB02g09053 Brassica carinata
BcaB02g10868 Brassica carinata
BcaB05g25283 Brassica carinata
BcaC01g05434 Brassica carinata
BcaC02g07351 Brassica carinata
BcaC03g15987 Brassica carinata
BcaC05g25500 Brassica carinata
BcaC05g25626 Brassica carinata
BcaC07g39909 Brassica carinata
BcaC08g43449 Brassica carinata
BcaC08g44754 Brassica carinata
BcaNung04141 Brassica carinata
BcaNung05465 Brassica carinata
BolC2t09756H Brassica oleracea
BolC3t15055H Brassica oleracea
BolC4t28281H Brassica oleracea
BolC5t30105H Brassica oleracea
BolC6t35901H Brassica oleracea
BolC6t37493H Brassica oleracea
BolC8t50743H Brassica oleracea
BraA02t07361Z Brassica rapa
BraA03t11481Z Brassica rapa
BraA04t18499Z Brassica rapa
BraA06t23383Z Brassica rapa
BraA06t24329Z Brassica rapa
BraA07t29937Z Brassica rapa
BraA09t40341Z Brassica rapa
C02p15570 Brassica napus
C02p37440 Brassica napus
C04p67780 Brassica napus
C05p13680 Brassica napus
C06p08200 Brassica napus
C06p23190 Brassica napus
C08p31200 Brassica napus
CAN.G395.37 Capsicum annuum
CAN.G438.91 Capsicum annuum
CAN.G503.10 Capsicum annuum
CANSAT56G2113 Cannabis sativa
CANSAT56G2974 Cannabis sativa
CARHR042910 Cardamine hirsuta
CARHR074210 Cardamine hirsuta
CARHR135060 Cardamine hirsuta
CARHR165980 Cardamine hirsuta
Carub.0001s4183 Capsella rubella
Carub.0002s2728 Capsella rubella
Carub.0004s2226 Capsella rubella
Carub.0005s2265 Capsella rubella
Ca_01093_v3 Cicer arietinum L.
Ca_07176_v3 Cicer arietinum L.
CBR_g40151 Chara braunii
Cc02_g06610 Coffea canephora
Cc04_g03830 Coffea canephora
CDE01G0261 Ceratophyllum demersum
CDE02G1845 Ceratophyllum demersum
CDE02G3382 Ceratophyllum demersum
CDE04G2992 Ceratophyllum demersum
Cfa002025 Carpinus fangiana
Ciclev10025112m.g Citrus clementina
Ciclev10032760m.g Citrus clementina
CiPaw.01G243300 Carya illinoinensis
CiPaw.01G298000 Carya illinoinensis
CiPaw.02G192000 Carya illinoinensis
ClCG07G004130 Citrullus lanatus
ClCG09G002540 Citrullus lanatus
COL.COLO4_12865 Corchorus olitorius
COL.COLO4_25708 Corchorus olitorius
Cpa.g.sc10.201 Carica papaya
Cpa.g.sc19.180 Carica papaya
Cre01.g039400 Chlamydomonas reinhardtii
Cre09.g407300 Chlamydomonas reinhardtii
CsaV3_5G010090 Cucumis sativus L.
CsaV3_6G001810 Cucumis sativus L.
CsaV3_7G032780 Cucumis sativus L.
CSS0000908 Camellia sinensis var. sinensis
CSS0008324 Camellia sinensis var. sinensis
CSS0031851 Camellia sinensis var. sinensis
CSS0040650 Camellia sinensis var. sinensis
DCAR_011809 Daucus carota
DCAR_024832 Daucus carota
DCAR_025468 Daucus carota
DCAR_025609 Daucus carota
Dinv10628 Davidia involucrata
Dinv17989 Davidia involucrata
Dinv30554 Davidia involucrata
Dinv34390 Davidia involucrata
Dinv38080 Davidia involucrata
Duzib106G0048 Durio zibethinus
Duzib114G0106 Durio zibethinus
Duzib128G1394 Durio zibethinus
Duzib235G1342 Durio zibethinus
ECA232G0882 Erigeron canadensis
ECA234G2115 Erigeron canadensis
ECA238G0356 Erigeron canadensis
EL10Ac2g04819 Beta vulgaris
EL10Ac9g21963 Beta vulgaris
Eucgr.G03058 Eucalyptus grandis
Eucgr.J03032 Eucalyptus grandis
FAN02G1507 Fragaria x ananassa
FAN03G2638 Fragaria x ananassa
FAN06G3570 Fragaria x ananassa
FAN09G3957 Fragaria x ananassa
FAN14G3427 Fragaria x ananassa
FvH4_6g30590 Fragaria vesca
FvH4_7g24390 Fragaria vesca
Glyma.02G256900 Glycine max
Glyma.07G033000 Glycine max
Glyma.08G209200 Glycine max
Glyma.11G229100 Glycine max
Glyma.13G362400 Glycine max
Glyma.14G059800 Glycine max
Glyma.15G011400 Glycine max
Glyma.18G028100 Glycine max
Gohir.A02G123600 Gossypium hirsutum
Gohir.A05G124200 Gossypium hirsutum
Gohir.A05G329600 Gossypium hirsutum
Gohir.A06G164000 Gossypium hirsutum
Gohir.A10G077700 Gossypium hirsutum
Gohir.A10G235400 Gossypium hirsutum
Gohir.A13G015500 Gossypium hirsutum
Gohir.D03G065800 Gossypium hirsutum
Gohir.D04G067600 Gossypium hirsutum
Gohir.D05G125200 Gossypium hirsutum
Gohir.D06G169300 Gossypium hirsutum
Gohir.D10G073900 Gossypium hirsutum
Gohir.D10G247800 Gossypium hirsutum
Gohir.D13G016700 Gossypium hirsutum
Gorai.002G056600 Gossypium raimondii
Gorai.009G129200 Gossypium raimondii
Gorai.010G198400 Gossypium raimondii
Gorai.011G079700 Gossypium raimondii
Gorai.011G286300 Gossypium raimondii
Gorai.012G076800 Gossypium raimondii
Gorai.013G018400 Gossypium raimondii
GSVIVG01017215001 Vitis vinifera
GSVIVG01032833001 Vitis vinifera
HanXRQChr02g0032521 Helianthus annuus
HanXRQChr04g0096811 Helianthus annuus
HanXRQChr07g0202951 Helianthus annuus
HanXRQChr09g0251471 Helianthus annuus
HanXRQChr10g0304531 Helianthus annuus
HanXRQChr14g0459821 Helianthus annuus
HanXRQChr16g0504231 Helianthus annuus
Haze_16498 Corylus avellana
Haze_16500 Corylus avellana
Haze_17220 Corylus avellana
Hma1.2p1_0515F.1_g170350 Hydrangea macrophylla
HPP92_001756 Vanilla planifolia
HPP92_003468 Vanilla planifolia
HPP92_003473 Vanilla planifolia
HPP92_007334 Vanilla planifolia
HPP92_022212 Vanilla planifolia
HPP92_022226 Vanilla planifolia
HPP92_023330 Vanilla planifolia
HPP92_026873 Vanilla planifolia
Hund00570 Selenicereus undatus
Hund06591 Selenicereus undatus
Hund13851 Selenicereus undatus
Lalb_Chr04g0262531 Lupinus albus
Lalb_Chr07g0177431 Lupinus albus
Lalb_Chr08g0231731 Lupinus albus
Lalb_Chr10g0105131 Lupinus albus
Lalb_Chr14g0373601 Lupinus albus
Lalb_Chr15g0084141 Lupinus albus
Lalb_Chr17g0346751 Lupinus albus
Lalb_Chr18g0052581 Lupinus albus
Lalb_Chr22g0351061 Lupinus albus
Lj1A954T15 Lonicera japonica
Lj3g0002261 Lotus japonicus
Lj3g0014600 Lotus japonicus
Lj5A67T54 Lonicera japonica
Lj6g0004743 Lotus japonicus
Lj8A68T45 Lonicera japonica
Lj9A503T44 Lonicera japonica
Lsat_1_v5_gn_1_33701 Lactuca sativa
Lsat_1_v5_gn_2_122961 Lactuca sativa
Lsat_1_v5_gn_5_132821 Lactuca sativa
Lsat_1_v5_gn_9_61260 Lactuca sativa
Manes.04G119000 Manihot esculenta
Manes.07G128800 Manihot esculenta
Manes.10G013500 Manihot esculenta
Manes.11G049200 Manihot esculenta
MBI04_g00951_MAGBIO Magnolia biondii
MBI04_g35057_MAGBIO Magnolia biondii
MBI11_g32502_MAGBIO Magnolia biondii
MD01G1152300 Malus domestica
MD07G1221300 Malus domestica
MD09G1218700 Malus domestica
MD17G1202000 Malus domestica
Medtr2g102760 Medicago truncatula
Medtr2g102800 Medicago truncatula
Medtr3g070400 Medicago truncatula
Medtr4g011440 Medicago truncatula
MELO3C023388.2 Cucumis melo
MELO3C025189.2 Cucumis melo
Migut.D01045 Erythranthe guttata
Migut.F00678 Erythranthe guttata
Migut.F01381 Erythranthe guttata
Migut.I00812 Erythranthe guttata
MSTRG.207 Avicennia marina
MSTRG.22718 Avicennia marina
MSTRG.8952 Avicennia marina
MSTRG.9443 Avicennia marina
Nitab4.5_0000395g0050 Nicotiana tabacum
Nitab4.5_0000410g0370 Nicotiana tabacum
Nitab4.5_0000620g0170 Nicotiana tabacum
Nitab4.5_0002100g0050 Nicotiana tabacum
Nitab4.5_0003512g0010 Nicotiana tabacum
Nitab4.5_0004338g0090 Nicotiana tabacum
Nitab4.5_0005786g0020 Nicotiana tabacum
Nn1g00271 Nelumbo nucifera
Nn1g00772 Nelumbo nucifera
Nn2g11483 Nelumbo nucifera
Nn2g11902 Nelumbo nucifera
Nn2g13705 Nelumbo nucifera
Nn8g39343 Nelumbo nucifera
Oeu005848.1 Olea europaea
Oeu015230.1 Olea europaea
Oeu020518.1 Olea europaea
Oeu025171.1 Olea europaea
Oeu025640.3 Olea europaea
Oeu035704.1 Olea europaea
Oeu048492.2 Olea europaea
Oeu052307.2 Olea europaea
Os01g0647700 Oryza sativa ssp. japonica
Os03g0123800 Oryza sativa ssp. japonica
Os03g0185950 Oryza sativa ssp. japonica
Os10g0535600 Oryza sativa ssp. japonica
Peaxi162Scf00015g00523 Petunia axillaris
Peaxi162Scf00207g00740 Petunia axillaris
Peaxi162Scf00825g00016 Petunia axillaris
Peaxi162Scf00957g00223 Petunia axillaris
Peaxi162Scf01208g00135 Petunia axillaris
PGR102G2868 Punica granatum
PGSC0003DMG400005696 Solanum tuberosum
PGSC0003DMG400027185 Solanum tuberosum
PGSC0003DMG400028548 Solanum tuberosum
Phvul.001G242400 Phaseolus vulgaris
Phvul.005G174100 Phaseolus vulgaris
Phvul.008G224400 Phaseolus vulgaris
Phvul.010G153000 Phaseolus vulgaris
Potri.001G174900 Populus trichocarpa
Potri.003G059400 Populus trichocarpa
Potri.008G067700 Populus trichocarpa
Potri.010G189600 Populus trichocarpa
Pp3c16_15720 Physcomitrium patens
Pp3c27_6880 Physcomitrium patens
Pp3c5_1730 Physcomitrium patens
Pp3c6_29370 Physcomitrium patens
Pp3c6_29375 Physcomitrium patens
Prupe.2G249300 Prunus persica
Prupe.3G077700 Prunus persica
Prupe.6G160600 Prunus persica
Psat0s2701g0040 Pisum sativum
Psat5g127840 Pisum sativum
Psat7g254800 Pisum sativum
PSO017G4027 Papaver somniferum
PSO170G0320 Papaver somniferum
PSO339G5606 Papaver somniferum
PSO339G5706 Papaver somniferum
PSO384G3980 Papaver somniferum
PSO801G0446 Papaver somniferum
QL05p027122 Quercus lobata
QL08p063075 Quercus lobata
RcHm_v2.0_Chr1g0370091 Rosa chinensis
RcHm_v2.0_Chr2g0137001 Rosa chinensis
Rhsim03G0143200 Rhododendron simsii
Rhsim08G0217400 Rhododendron simsii
Rhsim09G0176900 Rhododendron simsii
Sabra01G0137400 Salix brachista
Sabra03G0034000 Salix brachista
Sabra10G0146200 Salix brachista
SalBow6G1496 Salvia bowleyana
SalBow6G5217 Salvia bowleyana
Sc10g0002320 Simmondsia chinensis
Sc11g0005010 Simmondsia chinensis
Sc12g0008950 Simmondsia chinensis
Sed0012326 Sechium edule
Sed0019088 Sechium edule
Sed0020470 Sechium edule
SEGI_00047 Sequoiadendron giganteum
SEGI_03214 Sequoiadendron giganteum
SEGI_04418 Sequoiadendron giganteum
SEGI_04698 Sequoiadendron giganteum
SEGI_06795 Sequoiadendron giganteum
SEGI_07928 Sequoiadendron giganteum
SEGI_07985 Sequoiadendron giganteum
SEGI_11078 Sequoiadendron giganteum
SEGI_13473 Sequoiadendron giganteum
SEGI_20585 Sequoiadendron giganteum
SEGI_24735 Sequoiadendron giganteum
SEGI_25932 Sequoiadendron giganteum
SEGI_29525 Sequoiadendron giganteum
SEGI_32935 Sequoiadendron giganteum
SEGI_32953 Sequoiadendron giganteum
SEGI_35183 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07628 Striga asiatica
SGA_v2.0_scaffold37G14797 Striga asiatica
SGA_v2.0_scaffold44G16692 Striga asiatica
SMO112G0127 Selaginella moellendorffii
SMO122G0007 Selaginella moellendorffii
SMO172G0187 Selaginella moellendorffii
SMO175G0018 Selaginella moellendorffii
SMO196G0168 Selaginella moellendorffii
SMO274G0041 Selaginella moellendorffii
SMO364G0686 Selaginella moellendorffii
Solyc03g119990.4 Solanum lycopersicum
Solyc05g052750.3 Solanum lycopersicum
Solyc06g067890.3 Solanum lycopersicum
Sopen03g038870 Solanum pennellii
Sopen05g031270 Solanum pennellii
Sopen06g025170 Solanum pennellii
Sp1g13850 Schrenkiella parvula
Sp1g39320 Schrenkiella parvula
Sp4g22400 Schrenkiella parvula
Sp5g06620 Schrenkiella parvula
Sp5g35530 Schrenkiella parvula
TAR383G0187 Trochodendron aralioides
TAR625G1051 Trochodendron aralioides
TAR626G1732 Trochodendron aralioides
TAR633G1117 Trochodendron aralioides
TAR636G0558 Trochodendron aralioides
TAR636G3140 Trochodendron aralioides
THA.LOC104808220 Tarenaya hassleriana
THA.LOC104810574 Tarenaya hassleriana
THA.LOC104812487 Tarenaya hassleriana
THA.LOC104815542 Tarenaya hassleriana
THA.LOC104824315 Tarenaya hassleriana
Thecc.06G077000 Theobroma cacao
Thecc.10G019900 Theobroma cacao
Thhalv10010703m.g Eutrema salsugineum
Thhalv10012329m.g Eutrema salsugineum
Thhalv10017237m.g Eutrema salsugineum
Thhalv10018250m.g Eutrema salsugineum
TPR.G2531 Trifolium pratense
TPR.G37153 Trifolium pratense
TPR.G38620 Trifolium pratense
TWI09G1333 Tripterygium wilfordii
TWI73G0747 Tripterygium wilfordii
TWI75G0218 Tripterygium wilfordii
unitig_747.g21414 Utricularia gibba
vmacro06974 Vaccinium macrocarpon
vmacro10048 Vaccinium macrocarpon
vmacro18952 Vaccinium macrocarpon
VMungo0331G0430 Vigna mungo
VMungo0647G0798 Vigna mungo
VMungo1080G0185 Vigna mungo
VMungo1383G2947 Vigna mungo
Zm00001eb001760 Zea mays
Zm00001eb021990 Zea mays
Zm00001eb158470 Zea mays
Zm00001eb393620 Zea mays

User provided reference genes

Program Settings