Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43710 Brassica napus
A04p16650 Brassica napus
A04p16670 Brassica napus
A08p23420 Brassica napus
A09p57130 Brassica napus
A09p57720 Brassica napus
Aa31LG1G16820 Aethionema arabicum
Aa31LG6G15530 Aethionema arabicum
Aa31LG7G14560 Aethionema arabicum
Actinidia07896 Actinidia chinensis
Actinidia13590 Actinidia chinensis
Actinidia36594 Actinidia chinensis
Actinidia36595 Actinidia chinensis
Ah.03g143370 Amaranthus hybridus
Ah.03g143410 Amaranthus hybridus
Ah.10g029950 Amaranthus hybridus
AL4G11640 Arabidopsis lyrata
AL7G11930 Arabidopsis lyrata
AL8G42650 Arabidopsis lyrata
Aqoxy2G00315 Aquilegia oxysepala
Aqoxy2G00318 Aquilegia oxysepala
Aqoxy2G00321 Aquilegia oxysepala
Aqoxy6G00598 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9D9T18 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CQ5AKN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G66WJ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQM1R6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8ESB5 Arachis hypogaea
AT2G22170 Arabidopsis thaliana
AT4G39730 Arabidopsis thaliana
AT5G65158 Arabidopsis thaliana
ATR0057G017 Amborella trichopoda
ATR0564G420 Amborella trichopoda
Atru.chr1.835 Acer truncatum
Atru.chr1.843 Acer truncatum
Atru.chr4.109 Acer truncatum
AUR62002021 Chenopodium quinoa
AUR62002022 Chenopodium quinoa
AUR62003780 Chenopodium quinoa
AUR62006305 Chenopodium quinoa
AUR62006306 Chenopodium quinoa
AUR62026349 Chenopodium quinoa
AUR62026350 Chenopodium quinoa
AUR62028594 Chenopodium quinoa
AUR62031733 Chenopodium quinoa
AUR62032322 Chenopodium quinoa
AUR62032616 Chenopodium quinoa
AUR62032618 Chenopodium quinoa
AUR62035987 Chenopodium quinoa
BcaB01g02286 Brassica carinata
BcaB01g03396 Brassica carinata
BcaB01g03397 Brassica carinata
BcaB03g12264 Brassica carinata
BcaB04g17429 Brassica carinata
BcaB06g27806 Brassica carinata
BcaB07g29780 Brassica carinata
BcaB08g35047 Brassica carinata
BcaC01g00313 Brassica carinata
BcaC02g08686 Brassica carinata
BcaC02g08687 Brassica carinata
BcaC02g08735 Brassica carinata
BcaC03g18309 Brassica carinata
BcaC07g41011 Brassica carinata
BcaC07g41012 Brassica carinata
BcaC07g41091 Brassica carinata
BolC2t12452H Brassica oleracea
BolC3t20078H Brassica oleracea
BolC4t26710H Brassica oleracea
BolC8t51585H Brassica oleracea
BraA02t09295Z Brassica rapa
BraA04t17299Z Brassica rapa
BraA04t17301Z Brassica rapa
BraA09t41105Z Brassica rapa
BraA09t41165Z Brassica rapa
C02p63850 Brassica napus
C03p78150 Brassica napus
C04p51200 Brassica napus
C04p51210 Brassica napus
C08p40150 Brassica napus
C08p40930 Brassica napus
CAN.G1158.9 Capsicum annuum
CAN.G337.131 Capsicum annuum
CAN.G485.4 Capsicum annuum
CAN.G813.10 Capsicum annuum
CAN.G813.11 Capsicum annuum
CAN.G813.9 Capsicum annuum
CANSAT01G1086 Cannabis sativa
CARHR000100 Cardamine hirsuta
CARHR113320 Cardamine hirsuta
CARHR157960 Cardamine hirsuta
CARHR246990 Cardamine hirsuta
CARHR254590 Cardamine hirsuta
CARHR279060 Cardamine hirsuta
Carub.0004s0133 Capsella rubella
Carub.0007s0161 Capsella rubella
Carub.0008s2599 Capsella rubella
Ca_16537_v3 Cicer arietinum L.
Ca_17730_v3 Cicer arietinum L.
Cc07_g15360 Coffea canephora
Cc07_g15370 Coffea canephora
CDE05G0072 Ceratophyllum demersum
CDE05G0546 Ceratophyllum demersum
CDE09G0066 Ceratophyllum demersum
CDE11G0762 Ceratophyllum demersum
Ciclev10006444m.g Citrus clementina
Ciclev10026538m.g Citrus clementina
CiPaw.04G098200 Carya illinoinensis
ClCG01G001120 Citrullus lanatus
ClCG01G018880 Citrullus lanatus
COL.COLO4_09943 Corchorus olitorius
COL.COLO4_14093 Corchorus olitorius
Cpa.g.c45788 Carica papaya
Cpa.g.sc1516.1 Carica papaya
Cpa.g.sc283.2 Carica papaya
Cpa.g.sc5.141 Carica papaya
CsaV3_5G001250 Cucumis sativus L.
CsaV3_6G045540 Cucumis sativus L.
CsaV3_6G045550 Cucumis sativus L.
CSS0003256 Camellia sinensis var. sinensis
CSS0017796 Camellia sinensis var. sinensis
CSS0028578 Camellia sinensis var. sinensis
DCAR_001487 Daucus carota
DCAR_011509 Daucus carota
DCAR_021845 Daucus carota
Dinv16297 Davidia involucrata
Dinv16298 Davidia involucrata
Dinv16850 Davidia involucrata
Dinv21921 Davidia involucrata
Duzib084G1212 Durio zibethinus
Duzib147G0813 Durio zibethinus
Duzib187G0853 Durio zibethinus
ECA246G4551 Erigeron canadensis
ECA247G1213 Erigeron canadensis
EL10Ac2g02756 Beta vulgaris
EL10Ac5g10536 Beta vulgaris
EL10Ac6g15087 Beta vulgaris
EL10Ac6g15088 Beta vulgaris
Eucgr.I00424 Eucalyptus grandis
Eucgr.K00174 Eucalyptus grandis
Eucgr.L01585 Eucalyptus grandis
FAN19G1329 Fragaria x ananassa
FAN23G0953 Fragaria x ananassa
FAN26G0163 Fragaria x ananassa
FAN28G0893 Fragaria x ananassa
FvH4_1g21150 Fragaria vesca
Glyma.05G179300 Glycine max
Glyma.08G137000 Glycine max
Glyma.11G239400 Glycine max
Gohir.A02G143900 Gossypium hirsutum
Gohir.A11G200200 Gossypium hirsutum
Gohir.A12G093600 Gossypium hirsutum
Gohir.A12G197500 Gossypium hirsutum
Gohir.D03G036700 Gossypium hirsutum
Gohir.D11G222800 Gossypium hirsutum
Gohir.D12G096200 Gossypium hirsutum
Gohir.D12G200000 Gossypium hirsutum
Gorai.003G038500 Gossypium raimondii
Gorai.007G240400 Gossypium raimondii
Gorai.008G104400 Gossypium raimondii
Gorai.008G215200 Gossypium raimondii
GSVIVG01005877001 Vitis vinifera
GSVIVG01029982001 Vitis vinifera
HanXRQChr06g0169411 Helianthus annuus
HanXRQChr10g0289401 Helianthus annuus
HanXRQChr15g0470751 Helianthus annuus
Haze_24952 Corylus avellana
Hma1.2p1_0047F.1_g027950 Hydrangea macrophylla
Hma1.2p1_0049F.1_g028180 Hydrangea macrophylla
Hma1.2p1_0267F.1_g107440 Hydrangea macrophylla
Hma1.2p1_0460F.1_g157530 Hydrangea macrophylla
Hma1.2p1_0460F.1_g157540 Hydrangea macrophylla
Hma1.2p1_0756F.1_g213230 Hydrangea macrophylla
Hma1.2p1_0852F.1_g228640 Hydrangea macrophylla
Hma1.2p1_1132F.1_g260180 Hydrangea macrophylla
Hma1.2p1_1491F.1_g286690 Hydrangea macrophylla
HPP92_004294 Vanilla planifolia
HPP92_004296 Vanilla planifolia
HPP92_004299 Vanilla planifolia
HPP92_016346 Vanilla planifolia
Hund13636 Selenicereus undatus
Hund16273 Selenicereus undatus
Hund16274 Selenicereus undatus
Hund21784 Selenicereus undatus
Hund21785 Selenicereus undatus
Hund21787 Selenicereus undatus
Hund21788 Selenicereus undatus
Hund21805 Selenicereus undatus
Hund24734 Selenicereus undatus
Lalb_Chr07g0185121 Lupinus albus
Lalb_Chr08g0231141 Lupinus albus
Lalb_Chr12g0203781 Lupinus albus
Lalb_Chr13g0296011 Lupinus albus
Lj1P977T25 Lonicera japonica
Lj2P551T15 Lonicera japonica
Lj4g0010308 Lotus japonicus
Lj6g0013317 Lotus japonicus
Lsat_1_v5_gn_5_44120 Lactuca sativa
Lsat_1_v5_gn_9_29700 Lactuca sativa
Manes.06G132900 Manihot esculenta
Manes.12G136400 Manihot esculenta
Manes.12G136500 Manihot esculenta
Manes.13G092000 Manihot esculenta
Manes.14G037600 Manihot esculenta
Mapoly0036s0049 Marchantia polymorpha
Mapoly0036s0051 Marchantia polymorpha
Mapoly0036s0052 Marchantia polymorpha
Mapoly0077s0065 Marchantia polymorpha
Mapoly0117s0046 Marchantia polymorpha
Mapoly0117s0048 Marchantia polymorpha
Mapoly0134s0042 Marchantia polymorpha
Mapoly0134s0045 Marchantia polymorpha
Mapoly0134s0046 Marchantia polymorpha
Mapoly0134s0047 Marchantia polymorpha
Mapoly0144s0007 Marchantia polymorpha
MBI05_g32452_MAGBIO Magnolia biondii
MD01G1027400 Malus domestica
MD01G1181000 Malus domestica
MD05G1032200 Malus domestica
MD15G1326500 Malus domestica
Medtr3g087490 Medicago truncatula
Medtr3g087510 Medicago truncatula
Medtr4g036345 Medicago truncatula
Medtr8g090315 Medicago truncatula
MELO3C005822.2 Cucumis melo
MELO3C007767.2 Cucumis melo
MELO3C032900.2 Cucumis melo
Migut.F00499 Erythranthe guttata
Migut.H02367 Erythranthe guttata
Migut.H02368 Erythranthe guttata
Migut.L00110 Erythranthe guttata
MSTRG.15708 Avicennia marina
MSTRG.23336 Avicennia marina
MSTRG.2562 Avicennia marina
MSTRG.2563 Avicennia marina
Nitab4.5_0000104g0210 Nicotiana tabacum
Nitab4.5_0000104g0230 Nicotiana tabacum
Nitab4.5_0001322g0010 Nicotiana tabacum
Nitab4.5_0001929g0070 Nicotiana tabacum
Nitab4.5_0002712g0010 Nicotiana tabacum
Nitab4.5_0002712g0020 Nicotiana tabacum
Nitab4.5_0004173g0010 Nicotiana tabacum
Nitab4.5_0004173g0030 Nicotiana tabacum
Nitab4.5_0006836g0010 Nicotiana tabacum
Nitab4.5_0012757g0010 Nicotiana tabacum
Nn1g05322 Nelumbo nucifera
Nn2g15880 Nelumbo nucifera
Nn5g29077 Nelumbo nucifera
Nn6g33884 Nelumbo nucifera
Nn6g33885 Nelumbo nucifera
Oeu031399.1 Olea europaea
Oeu032160.2 Olea europaea
Oeu051804.1 Olea europaea
Oeu056594.1 Olea europaea
Os02g0547300 Oryza sativa ssp. japonica
Os02g0753300 Oryza sativa ssp. japonica
Os03g0594600 Oryza sativa ssp. japonica
Os04g0456200 Oryza sativa ssp. japonica
Os04g0456300 Oryza sativa ssp. japonica
Os04g0456700 Oryza sativa ssp. japonica
Os06g0206401 Oryza sativa ssp. japonica
Os06g0221300 Oryza sativa ssp. japonica
Os10g0361000 Oryza sativa ssp. japonica
Os10g0361300 Oryza sativa ssp. japonica
Os10g0361900 Oryza sativa ssp. japonica
Peaxi162Scf00271g00085 Petunia axillaris
Peaxi162Scf00295g00091 Petunia axillaris
Peaxi162Scf00478g00045 Petunia axillaris
Peaxi162Scf00478g00048 Petunia axillaris
Peaxi162Scf00951g00313 Petunia axillaris
Peaxi162Scf00951g00331 Petunia axillaris
Peaxi162Scf00951g00335 Petunia axillaris
PGR004G0925 Punica granatum
PGR142G0133 Punica granatum
PGSC0003DMG400013983 Solanum tuberosum
PGSC0003DMG400013984 Solanum tuberosum
PGSC0003DMG400016749 Solanum tuberosum
PGSC0003DMG400018856 Solanum tuberosum
PGSC0003DMG400020622 Solanum tuberosum
PGSC0003DMG400020623 Solanum tuberosum
Phvul.001G251400 Phaseolus vulgaris
Phvul.002G254900 Phaseolus vulgaris
Potri.003G107100 Populus trichocarpa
Potri.005G076900 Populus trichocarpa
Potri.005G077000 Populus trichocarpa
Potri.007G091000 Populus trichocarpa
Potri.007G091100 Populus trichocarpa
Pp3c4_4730 Physcomitrium patens
Prupe.2G275000 Prunus persica
Prupe.6G182600 Prunus persica
Psat5g089400 Pisum sativum
Psat5g089440 Pisum sativum
Psat7g053840 Pisum sativum
PSO063G5929 Papaver somniferum
PSO541G0174 Papaver somniferum
PSO541G5070 Papaver somniferum
PSO541G5847 Papaver somniferum
PSO781G0095 Papaver somniferum
PSO781G0143 Papaver somniferum
PSO781G0189 Papaver somniferum
PSO781G0252 Papaver somniferum
PSO781G0265 Papaver somniferum
PSO781G0325 Papaver somniferum
PSO782G2592 Papaver somniferum
QL02p025687 Quercus lobata
QL06p049902 Quercus lobata
RcHm_v2.0_Chr2g0114931 Rosa chinensis
Rhsim10G0159500 Rhododendron simsii
Sabra03G0073900 Salix brachista
Sabra05G0063400 Salix brachista
Sabra07G0074700 Salix brachista
Sabra07G0074800 Salix brachista
SalBow3G0264 Salvia bowleyana
SalBow3G0588 Salvia bowleyana
SalBow3G1642 Salvia bowleyana
SalBow3G3252 Salvia bowleyana
SalBow3G3549 Salvia bowleyana
SalBow5G1073 Salvia bowleyana
SalBow5G5269 Salvia bowleyana
Sc06g0006590 Simmondsia chinensis
Sc16g0005570 Simmondsia chinensis
Sc16g0007210 Simmondsia chinensis
Sc16g0007220 Simmondsia chinensis
Sc16g0007230 Simmondsia chinensis
Sc16g0007240 Simmondsia chinensis
Sc16g0007250 Simmondsia chinensis
Sc16g0007260 Simmondsia chinensis
Sc16g0007270 Simmondsia chinensis
Sc16g0007280 Simmondsia chinensis
Sc16g0010950 Simmondsia chinensis
Sc16g0010970 Simmondsia chinensis
Sc16g0010980 Simmondsia chinensis
Sed0009655 Sechium edule
Sed0010076 Sechium edule
Sed0012009 Sechium edule
Sed0026545 Sechium edule
SEGI_15788 Sequoiadendron giganteum
SEGI_22646 Sequoiadendron giganteum
SEGI_39204 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31524 Striga asiatica
SGA_v2.0_scaffold2G01227 Striga asiatica
SGA_v2.0_scaffold54G19491 Striga asiatica
SHI11541 Sapria himalayana
SMO119G0256 Selaginella moellendorffii
SMO147G0051 Selaginella moellendorffii
SMO147G0143 Selaginella moellendorffii
SMO147G0185 Selaginella moellendorffii
SMO147G0230 Selaginella moellendorffii
SMO147G0399 Selaginella moellendorffii
SMO353G0115 Selaginella moellendorffii
SMO367G0597 Selaginella moellendorffii
SMO367G1173 Selaginella moellendorffii
Solyc03g093360.3 Solanum lycopersicum
Solyc03g096460.4 Solanum lycopersicum
Solyc03g096540.3 Solanum lycopersicum
Solyc03g096545.1 Solanum lycopersicum
Solyc04g054980.3 Solanum lycopersicum
Sopen03g024170 Solanum pennellii
Sopen03g026560 Solanum pennellii
Sopen03g026650 Solanum pennellii
Sopen03g026660 Solanum pennellii
Sopen04g024820 Solanum pennellii
Sopen04g024830 Solanum pennellii
Sp2g28230 Schrenkiella parvula
Sp4g01230 Schrenkiella parvula
Sp7g36160 Schrenkiella parvula
TAR376G1174 Trochodendron aralioides
TAR628G0138 Trochodendron aralioides
TAR636G2485 Trochodendron aralioides
THA.LOC104804155 Tarenaya hassleriana
THA.LOC104807705 Tarenaya hassleriana
THA.LOC104818487 Tarenaya hassleriana
Thecc.01G103900 Theobroma cacao
Thecc.03G152500 Theobroma cacao
Thhalv10000329m.g Eutrema salsugineum
Thhalv10000335m.g Eutrema salsugineum
Thhalv10000348m.g Eutrema salsugineum
Thhalv10000355m.g Eutrema salsugineum
Thhalv10000731m.g Eutrema salsugineum
Thhalv10005362m.g Eutrema salsugineum
Thhalv10026128m.g Eutrema salsugineum
TPR.G17832 Trifolium pratense
TPR.G17833 Trifolium pratense
TPR.G2159 Trifolium pratense
TPR.G3672 Trifolium pratense
TWI39G0443 Tripterygium wilfordii
TWI53G1398 Tripterygium wilfordii
TWI53G2033 Tripterygium wilfordii
TWI73G0372 Tripterygium wilfordii
TWI74G0922 Tripterygium wilfordii
unitig_0.g1885 Utricularia gibba
unitig_0.g1886 Utricularia gibba
unitig_32.g10695 Utricularia gibba
unitig_899.g14533 Utricularia gibba
vmacro12949 Vaccinium macrocarpon
VMungo0251G1170 Vigna mungo
VMungo1383G2479 Vigna mungo
Zm00001eb081030 Zea mays
Zm00001eb194190 Zea mays

User provided reference genes

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