Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34020 Brassica napus
A03p05750 Brassica napus
A03p18200 Brassica napus
A05p13270 Brassica napus
A05p17090 Brassica napus
A05p27980 Brassica napus
A06p27510 Brassica napus
A10p25190 Brassica napus
Aa31LG5G4760 Aethionema arabicum
Aa31LG8G7610 Aethionema arabicum
Aa31LG8G7620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1757 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2584 Anthoceros agrestis
Actinidia02636 Actinidia chinensis
Actinidia10745 Actinidia chinensis
Actinidia10815 Actinidia chinensis
Actinidia26615 Actinidia chinensis
Actinidia32267 Actinidia chinensis
Actinidia35363 Actinidia chinensis
Actinidia35364 Actinidia chinensis
AL3G34720 Arabidopsis lyrata
AL4G27950 Arabidopsis lyrata
AL6G23570 Arabidopsis lyrata
Aqoxy1G03055 Aquilegia oxysepala
Aqoxy3G01933 Aquilegia oxysepala
Aqoxy423s001 Aquilegia oxysepala
Aqoxy7G03262 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7D7HLL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NRH3QV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCKD5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VY5Z2H Arachis hypogaea
AT2G32550 Arabidopsis thaliana
AT3G20800 Arabidopsis thaliana
AT5G12980 Arabidopsis thaliana
ATR0584G124 Amborella trichopoda
ATR0721G012 Amborella trichopoda
Atru.chr2.3495 Acer truncatum
Atru.chr2.3496 Acer truncatum
AUR62015827 Chenopodium quinoa
AUR62020391 Chenopodium quinoa
BcaB01g03972 Brassica carinata
BcaB01g03973 Brassica carinata
BcaB01g03974 Brassica carinata
BcaB01g03975 Brassica carinata
BcaB01g05384 Brassica carinata
BcaB02g10462 Brassica carinata
BcaB04g20627 Brassica carinata
BcaB06g26150 Brassica carinata
BcaC01g05903 Brassica carinata
BcaC02g11311 Brassica carinata
BcaC05g28280 Brassica carinata
BcaC09g49022 Brassica carinata
BolC3t13175H Brassica oleracea
BolC3t14505H Brassica oleracea
BolC4t23263H Brassica oleracea
BolC5t33060H Brassica oleracea
BolC9t59248H Brassica oleracea
BraA01t03506Z Brassica rapa
BraA03t09913Z Brassica rapa
BraA03t11080Z Brassica rapa
BraA05t20268Z Brassica rapa
BraA05t21681Z Brassica rapa
BraA06t25691Z Brassica rapa
BraA10t44582Z Brassica rapa
C01p43420 Brassica napus
C03p06700 Brassica napus
C03p21230 Brassica napus
C04p17120 Brassica napus
C05p43280 Brassica napus
C09p64110 Brassica napus
CAN.G1337.33 Capsicum annuum
CAN.G2012.4 Capsicum annuum
CAN.G227.13 Capsicum annuum
CAN.G227.14 Capsicum annuum
CAN.G290.2 Capsicum annuum
CAN.G322.131 Capsicum annuum
CAN.G352.74 Capsicum annuum
CAN.G492.10 Capsicum annuum
CAN.G492.11 Capsicum annuum
CAN.G492.12 Capsicum annuum
CAN.G492.13 Capsicum annuum
CAN.G492.14 Capsicum annuum
CAN.G492.15 Capsicum annuum
CAN.G492.16 Capsicum annuum
CAN.G492.17 Capsicum annuum
CAN.G492.18 Capsicum annuum
CAN.G492.6 Capsicum annuum
CAN.G492.7 Capsicum annuum
CAN.G492.8 Capsicum annuum
CAN.G492.9 Capsicum annuum
CAN.G64.3 Capsicum annuum
CAN.G928.2 Capsicum annuum
CAN.G952.4 Capsicum annuum
CANSAT64G0074 Cannabis sativa
CANSAT78G0203 Cannabis sativa
CARHR096640 Cardamine hirsuta
CARHR126410 Cardamine hirsuta
CARHR156740 Cardamine hirsuta
CARHR200480 Cardamine hirsuta
Carub.0003s2076 Capsella rubella
Carub.0004s1389 Capsella rubella
Carub.0006s1115 Capsella rubella
Ca_06338_v3 Cicer arietinum L.
Ca_22987_v3 Cicer arietinum L.
Ca_25811_v3 Cicer arietinum L.
CBR_g19918 Chara braunii
Cc05_g14080 Coffea canephora
CDE02G0239 Ceratophyllum demersum
CDE05G1164 Ceratophyllum demersum
Cfa014343 Carpinus fangiana
Cfa020305 Carpinus fangiana
Cfa026336 Carpinus fangiana
Ciclev10010530m.g Citrus clementina
Ciclev10017581m.g Citrus clementina
CiPaw.03G158100 Carya illinoinensis
CiPaw.11G192700 Carya illinoinensis
CiPaw.12G132100 Carya illinoinensis
ClCG02G002070 Citrullus lanatus
ClCG09G010980 Citrullus lanatus
COL.COLO4_09899 Corchorus olitorius
COL.COLO4_21829 Corchorus olitorius
Cpa.g.sc572.3 Carica papaya
Cpa.g.sc84.105 Carica papaya
Cre12.g540350 Chlamydomonas reinhardtii
Cre12.g540400 Chlamydomonas reinhardtii
CsaV3_7G003430 Cucumis sativus L.
CsaV3_7G022000 Cucumis sativus L.
CSS0005633 Camellia sinensis var. sinensis
CSS0031204 Camellia sinensis var. sinensis
CSS0048596 Camellia sinensis var. sinensis
DCAR_016719 Daucus carota
DCAR_019266 Daucus carota
DCAR_022586 Daucus carota
Dinv08749 Davidia involucrata
Dinv22245 Davidia involucrata
Dinv39727 Davidia involucrata
Dinv40783 Davidia involucrata
Duzib133G0421 Durio zibethinus
Duzib170G0224 Durio zibethinus
ECA236G4909 Erigeron canadensis
ECA240G2364 Erigeron canadensis
ECA246G4587 Erigeron canadensis
EL10Ac4g07759 Beta vulgaris
Eucgr.F00722 Eucalyptus grandis
FAN02G0997 Fragaria x ananassa
FAN05G4991 Fragaria x ananassa
FAN07G2124 Fragaria x ananassa
FAN09G1139 Fragaria x ananassa
FAN11G0513 Fragaria x ananassa
FAN12G2715 Fragaria x ananassa
FAN14G1193 Fragaria x ananassa
FAN16G2637 Fragaria x ananassa
FAN17G1764 Fragaria x ananassa
FAN21G0147 Fragaria x ananassa
FAN25G1252 Fragaria x ananassa
FAN25G2099 Fragaria x ananassa
FvH4_3g23230 Fragaria vesca
FvH4_4g37120 Fragaria vesca
FvH4_6g42770 Fragaria vesca
Glyma.02G293100 Glycine max
Glyma.08G319800 Glycine max
Glyma.14G021500 Glycine max
Glyma.18G092700 Glycine max
Gohir.A06G108700 Gossypium hirsutum
Gohir.A07G185566 Gossypium hirsutum
Gohir.A07G185600 Gossypium hirsutum
Gohir.A07G185801 Gossypium hirsutum
Gohir.A07G185900 Gossypium hirsutum
Gohir.A07G185950 Gossypium hirsutum
Gohir.A13G215600 Gossypium hirsutum
Gohir.D06G112700 Gossypium hirsutum
Gohir.D07G192200 Gossypium hirsutum
Gohir.D07G192250 Gossypium hirsutum
Gohir.D07G192300 Gossypium hirsutum
Gohir.D07G192400 Gossypium hirsutum
Gohir.D07G192500 Gossypium hirsutum
Gohir.D13G219300 Gossypium hirsutum
Gorai.001G215000 Gossypium raimondii
Gorai.001G215100 Gossypium raimondii
Gorai.001G215200 Gossypium raimondii
Gorai.001G215300 Gossypium raimondii
Gorai.001G215400 Gossypium raimondii
Gorai.010G128500 Gossypium raimondii
Gorai.013G250200 Gossypium raimondii
GSVIVG01030470001 Vitis vinifera
GSVIVG01037696001 Vitis vinifera
GSVIVG01037697001 Vitis vinifera
HanXRQChr05g0159811 Helianthus annuus
HanXRQChr08g0233511 Helianthus annuus
HanXRQChr09g0247791 Helianthus annuus
Haze_12804 Corylus avellana
Hma1.2p1_0325F.1_g126050 Hydrangea macrophylla
Hma1.2p1_0325F.1_g126060 Hydrangea macrophylla
Hma1.2p1_2255F.1_g318165 Hydrangea macrophylla
Hma1.2p1_2862F.1_g329570 Hydrangea macrophylla
HPP92_000964 Vanilla planifolia
HPP92_013288 Vanilla planifolia
HPP92_013295 Vanilla planifolia
HPP92_022629 Vanilla planifolia
HPP92_026300 Vanilla planifolia
Hund23223 Selenicereus undatus
Hund29390 Selenicereus undatus
Hund29391 Selenicereus undatus
Lalb_Chr10g0092371 Lupinus albus
Lalb_Chr10g0092381 Lupinus albus
Lalb_Chr15g0081501 Lupinus albus
Lalb_Chr20g0115861 Lupinus albus
Lj1A878T42 Lonicera japonica
Lj6g0020307 Lotus japonicus
Lj8A171G40 Lonicera japonica
LjContig00272g0006368 Lotus japonicus
LjContig00272g0019063 Lotus japonicus
Lsat_1_v5_gn_5_3060 Lactuca sativa
Lsat_1_v5_gn_7_93281 Lactuca sativa
Lsat_1_v5_gn_9_106820 Lactuca sativa
Lsat_1_v5_gn_9_106841 Lactuca sativa
Manes.03G133200 Manihot esculenta
Manes.12G072500 Manihot esculenta
Manes.13G068625 Manihot esculenta
Manes.13G068647 Manihot esculenta
Manes.15G068100 Manihot esculenta
Mapoly0014s0138 Marchantia polymorpha
Mapoly0102s0013 Marchantia polymorpha
MBI10_g29395_MAGBIO Magnolia biondii
MBI18_g37709_MAGBIO Magnolia biondii
MCO14G356 Micromonas commoda
MD03G1196300 Malus domestica
MD09G1071800 Malus domestica
MD11G1212600 Malus domestica
MD13G1003400 Malus domestica
MD16G1004000 Malus domestica
Medtr1g043500 Medicago truncatula
Medtr1g043520 Medicago truncatula
Medtr1g043540 Medicago truncatula
Medtr1g056470 Medicago truncatula
Medtr3g018640 Medicago truncatula
Medtr3g053170 Medicago truncatula
Medtr5g093460 Medicago truncatula
Medtr6g065170 Medicago truncatula
Medtr8g106940 Medicago truncatula
MELO3C013140.2 Cucumis melo
MELO3C018831.2 Cucumis melo
Migut.H01806 Erythranthe guttata
Migut.M01732 Erythranthe guttata
Migut.M01733 Erythranthe guttata
MSTRG.12987 Avicennia marina
Nitab4.5_0000006g0320 Nicotiana tabacum
Nitab4.5_0000130g0310 Nicotiana tabacum
Nitab4.5_0000168g0240 Nicotiana tabacum
Nitab4.5_0001393g0100 Nicotiana tabacum
Nitab4.5_0004549g0010 Nicotiana tabacum
Nitab4.5_0004769g0010 Nicotiana tabacum
Nitab4.5_0004829g0080 Nicotiana tabacum
Nitab4.5_0005265g0010 Nicotiana tabacum
Nitab4.5_0005265g0020 Nicotiana tabacum
Nitab4.5_0008855g0040 Nicotiana tabacum
Nn1g03451 Nelumbo nucifera
Nn1g07232 Nelumbo nucifera
Nn2g11883 Nelumbo nucifera
Nn2g13904 Nelumbo nucifera
Nn6g35166 Nelumbo nucifera
Nn6g35169 Nelumbo nucifera
Nn8g40207 Nelumbo nucifera
Oeu008014.1 Olea europaea
Oeu008015.1 Olea europaea
Oeu026404.2 Olea europaea
Oeu026405.1 Olea europaea
Os02g0296400 Oryza sativa ssp. japonica
Os02g0301700 Oryza sativa ssp. japonica
Os03g0784800 Oryza sativa ssp. japonica
Os04g0613400 Oryza sativa ssp. japonica
Os07g0565200 Oryza sativa ssp. japonica
Peaxi162Scf00007g00023 Petunia axillaris
Peaxi162Scf00660g00007 Petunia axillaris
PGR031G1391 Punica granatum
PGR083G0879 Punica granatum
PGR142G2007 Punica granatum
PGR142G2525 Punica granatum
PGSC0003DMG400001085 Solanum tuberosum
PGSC0003DMG400001086 Solanum tuberosum
PGSC0003DMG400001087 Solanum tuberosum
PGSC0003DMG400014385 Solanum tuberosum
PGSC0003DMG400014419 Solanum tuberosum
PGSC0003DMG400017111 Solanum tuberosum
PGSC0003DMG400038880 Solanum tuberosum
PGSC0003DMG400041536 Solanum tuberosum
Phvul.006G046900 Phaseolus vulgaris
Phvul.008G269900 Phaseolus vulgaris
Potri.001G359300 Populus trichocarpa
Potri.011G086800 Populus trichocarpa
Potri.014G155500 Populus trichocarpa
Pp3c16_12660 Physcomitrium patens
Pp3c26_13780 Physcomitrium patens
Pp3c27_5750 Physcomitrium patens
PRCOL_00002022 Prasinoderma coloniale
Prupe.1G349000 Prunus persica
Prupe.2G057500 Prunus persica
Prupe.3G214100 Prunus persica
Prupe.4G219100 Prunus persica
Psat0s13336g0040 Pisum sativum
Psat0s4789g0040 Pisum sativum
Psat0s6504g0040 Pisum sativum
Psat2g015520 Pisum sativum
Psat2g015560 Pisum sativum
Psat5g038760 Pisum sativum
Psat5g038800 Pisum sativum
Psat7g005480 Pisum sativum
PSO063G2005 Papaver somniferum
PSO541G0308 Papaver somniferum
PSO675G7108 Papaver somniferum
PSO782G5183 Papaver somniferum
QL08p008729 Quercus lobata
QL08p031705 Quercus lobata
QL09p024286 Quercus lobata
RcHm_v2.0_Chr2g0158671 Rosa chinensis
RcHm_v2.0_Chr4g0446921 Rosa chinensis
RcHm_v2.0_Chr5g0040921 Rosa chinensis
Rhsim01G0016300 Rhododendron simsii
Rhsim01G0017300 Rhododendron simsii
Rhsim06G0220400 Rhododendron simsii
RhsimUnG0248500 Rhododendron simsii
Sabra11G0073200 Salix brachista
Sabra11G0078600 Salix brachista
Sabra11G0078700 Salix brachista
Sabra14G0117600 Salix brachista
Sabra16G0237000 Salix brachista
SalBow8G4621 Salvia bowleyana
Sc16g0005850 Simmondsia chinensis
Sed0022863 Sechium edule
SEGI_06835 Sequoiadendron giganteum
SEGI_21557 Sequoiadendron giganteum
SEGI_37136 Sequoiadendron giganteum
SGA_v2.0_scaffold363G49947 Striga asiatica
SGA_v2.0_scaffold8G04343 Striga asiatica
SHI26583 Sapria himalayana
SMO140G0109 Selaginella moellendorffii
Solyc05g043440.1 Solanum lycopersicum
Solyc05g044450.1 Solanum lycopersicum
Solyc05g044460.1 Solanum lycopersicum
Solyc05g046360.3 Solanum lycopersicum
Solyc07g049760.2 Solanum lycopersicum
Solyc07g049770.1 Solanum lycopersicum
Solyc07g049780.3 Solanum lycopersicum
Solyc07g049790.1 Solanum lycopersicum
Solyc07g049800.1 Solanum lycopersicum
Solyc07g051810.2 Solanum lycopersicum
Solyc10g006170.4 Solanum lycopersicum
Solyc10g006190.4 Solanum lycopersicum
Solyc10g006220.4 Solanum lycopersicum
Solyc12g014400.3 Solanum lycopersicum
Sopen03g011570 Solanum pennellii
Sopen05g026720 Solanum pennellii
Sopen07g025380 Solanum pennellii
Sopen07g025400 Solanum pennellii
Sopen10g002120 Solanum pennellii
Sopen10g002130 Solanum pennellii
Sopen10g002150 Solanum pennellii
Sopen10g002180 Solanum pennellii
Sopen12g007250 Solanum pennellii
Sp3g18820 Schrenkiella parvula
Sp4g14890 Schrenkiella parvula
Sp6g30990 Schrenkiella parvula
TAR624G0321 Trochodendron aralioides
TAR625G0838 Trochodendron aralioides
TAR626G1379 Trochodendron aralioides
TAR627G1160 Trochodendron aralioides
TAR629G2112 Trochodendron aralioides
THA.LOC104801000 Tarenaya hassleriana
THA.LOC104811126 Tarenaya hassleriana
THA.LOC104816040 Tarenaya hassleriana
THA.LOC104816911 Tarenaya hassleriana
THA.LOC104817897 Tarenaya hassleriana
Thecc.01G177500 Theobroma cacao
Thecc.09G223800 Theobroma cacao
Thhalv10014186m.g Eutrema salsugineum
Thhalv10021160m.g Eutrema salsugineum
TPR.G1161 Trifolium pratense
TPR.G1229 Trifolium pratense
TPR.G1234 Trifolium pratense
TPR.G17891 Trifolium pratense
TPR.G2779 Trifolium pratense
TPR.G2780 Trifolium pratense
TPR.G2783 Trifolium pratense
TPR.G2803 Trifolium pratense
TPR.G33747 Trifolium pratense
TPR.G40526 Trifolium pratense
TWI18G0848 Tripterygium wilfordii
TWI38G0984 Tripterygium wilfordii
TWI38G1473 Tripterygium wilfordii
TWI39G0872 Tripterygium wilfordii
TWI75G0676 Tripterygium wilfordii
unitig_8.g4795 Utricularia gibba
vmacro02213 Vaccinium macrocarpon
vmacro09342 Vaccinium macrocarpon
vmacro09343 Vaccinium macrocarpon
vmacro09697 Vaccinium macrocarpon
VMungo0540G2230 Vigna mungo
VMungo0647G0883 Vigna mungo
Zm00001eb070960 Zea mays
Zm00001eb213450 Zea mays

User provided reference genes

Program Settings