Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01210 Brassica napus
A03p67810 Brassica napus
A07p01080 Brassica napus
A07p01090 Brassica napus
A07p01110 Brassica napus
A07p01120 Brassica napus
A07p01190 Brassica napus
A07p01210 Brassica napus
A09p59210 Brassica napus
A10p25950 Brassica napus
Aa31LG3G15400 Aethionema arabicum
Aa31LG3G8140 Aethionema arabicum
Aa31LG8G16610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3820 Anthoceros agrestis
Actinidia01192 Actinidia chinensis
Actinidia03086 Actinidia chinensis
Actinidia17902 Actinidia chinensis
Actinidia25261 Actinidia chinensis
Actinidia30309 Actinidia chinensis
Actinidia31795 Actinidia chinensis
Ah.07g208380 Amaranthus hybridus
Ah.09g228390 Amaranthus hybridus
AL3G48620 Arabidopsis lyrata
AL4G12750 Arabidopsis lyrata
AL4G23000 Arabidopsis lyrata
AL5G27950 Arabidopsis lyrata
AL6G22550 Arabidopsis lyrata
AL8G25970 Arabidopsis lyrata
Aqoxy7G00562 Aquilegia oxysepala
Aqoxy7G01247 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18DUMX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EDA5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8NA4BZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2HWMC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6NDHS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J9WKAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K08V0X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6VRMV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RS3S7M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0C9NI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHT2R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WZ05FZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3TZBN Arachis hypogaea
AT2G19600 Arabidopsis thaliana
AT5G11800 Arabidopsis thaliana
AT5G51710 Arabidopsis thaliana
ATR0705G169 Amborella trichopoda
ATR0757G073 Amborella trichopoda
ATR0757G139 Amborella trichopoda
Atru.chr1.613 Acer truncatum
Atru.chr7.1568 Acer truncatum
AUR62016085 Chenopodium quinoa
AUR62021295 Chenopodium quinoa
AUR62023671 Chenopodium quinoa
AUR62027477 Chenopodium quinoa
AUR62033999 Chenopodium quinoa
BcaB03g16749 Brassica carinata
BcaB08g34876 Brassica carinata
BcaC02g10481 Brassica carinata
BcaC03g13392 Brassica carinata
BcaC04g19194 Brassica carinata
BcaC04g19621 Brassica carinata
BcaC06g31893 Brassica carinata
BcaC06g36604 Brassica carinata
BcaC07g41244 Brassica carinata
BcaNung02652 Brassica carinata
BcaNung06825 Brassica carinata
BolC2t06487H Brassica oleracea
BolC4t24382H Brassica oleracea
BolC7t40635H Brassica oleracea
BolC8t51811H Brassica oleracea
BolC9t58081H Brassica oleracea
BolC9t59331H Brassica oleracea
BraA01t02687Z Brassica rapa
BraA02t05100Z Brassica rapa
BraA07t27908Z Brassica rapa
BraA07t27909Z Brassica rapa
BraA09t41305Z Brassica rapa
BraA10t44657Z Brassica rapa
C02p05380 Brassica napus
C04p28360 Brassica napus
C07p02250 Brassica napus
C08p42500 Brassica napus
C09p52150 Brassica napus
C09p65030 Brassica napus
CAN.G1135.1 Capsicum annuum
CAN.G218.2 Capsicum annuum
CAN.G32.7 Capsicum annuum
CANSAT25G3803 Cannabis sativa
CANSAT31G0003 Cannabis sativa
CANSAT56G2745 Cannabis sativa
CARHR110050 Cardamine hirsuta
CARHR201370 Cardamine hirsuta
CARHR201380 Cardamine hirsuta
CARHR201390 Cardamine hirsuta
CARHR264570 Cardamine hirsuta
Carub.0003s3389 Capsella rubella
Carub.0006s1033 Capsella rubella
Carub.0008s1173 Capsella rubella
Ca_13173_v3 Cicer arietinum L.
Ca_14354_v3 Cicer arietinum L.
Ca_17404_v3 Cicer arietinum L.
Ca_19530_v3 Cicer arietinum L.
CBR_g29741 Chara braunii
Cc02_g03770 Coffea canephora
Cc06_g11210 Coffea canephora
Cc06_g11220 Coffea canephora
Cc08_g10510 Coffea canephora
CDE02G4525 Ceratophyllum demersum
CDE04G1190 Ceratophyllum demersum
CDE09G0556 Ceratophyllum demersum
Cfa003106 Carpinus fangiana
Cfa017948 Carpinus fangiana
Cfa025704 Carpinus fangiana
Ciclev10004634m.g Citrus clementina
Ciclev10007842m.g Citrus clementina
Ciclev10008401m.g Citrus clementina
CiPaw.03G098000 Carya illinoinensis
CiPaw.04G064000 Carya illinoinensis
CiPaw.15G039600 Carya illinoinensis
CiPaw.16G029000 Carya illinoinensis
ClCG03G015710 Citrullus lanatus
ClCG05G007540 Citrullus lanatus
ClCG08G016990 Citrullus lanatus
COL.COLO4_14198 Corchorus olitorius
COL.COLO4_18218 Corchorus olitorius
COL.COLO4_21048 Corchorus olitorius
Cpa.g.sc3.257 Carica papaya
Cpa.g.sc93.16 Carica papaya
Cre12.g493000 Chlamydomonas reinhardtii
CsaV3_1G040300 Cucumis sativus L.
CsaV3_2G025600 Cucumis sativus L.
CsaV3_3G016430 Cucumis sativus L.
CSS0000314 Camellia sinensis var. sinensis
CSS0008147 Camellia sinensis var. sinensis
CSS0012062 Camellia sinensis var. sinensis
CSS0021246 Camellia sinensis var. sinensis
CSS0023917 Camellia sinensis var. sinensis
CSS0032721 Camellia sinensis var. sinensis
CSS0039494 Camellia sinensis var. sinensis
DCAR_003127 Daucus carota
DCAR_007726 Daucus carota
DCAR_020217 Daucus carota
Dinv07999 Davidia involucrata
Dinv14082 Davidia involucrata
Dinv23435 Davidia involucrata
Dinv27979 Davidia involucrata
Dinv36753 Davidia involucrata
Dinv42305 Davidia involucrata
Duzib068G0072 Durio zibethinus
Duzib084G0388 Durio zibethinus
Duzib168G0538 Durio zibethinus
Duzib187G0156 Durio zibethinus
Duzib187G0785 Durio zibethinus
Duzib205G0474 Durio zibethinus
ECA233G0682 Erigeron canadensis
ECA233G3186 Erigeron canadensis
ECA240G2803 Erigeron canadensis
EL10Ac3g05772 Beta vulgaris
EL10Ac8g19241 Beta vulgaris
Eucgr.A02869 Eucalyptus grandis
Eucgr.C00907 Eucalyptus grandis
FAN01G1193 Fragaria x ananassa
FAN02G3258 Fragaria x ananassa
FAN03G1183 Fragaria x ananassa
FAN03G1859 Fragaria x ananassa
FAN06G0634 Fragaria x ananassa
FAN06G3003 Fragaria x ananassa
FAN10G4049 Fragaria x ananassa
FAN14G1573 Fragaria x ananassa
FAN15G2290 Fragaria x ananassa
FAN19G3157 Fragaria x ananassa
FAN20G0535 Fragaria x ananassa
FAN23G1853 Fragaria x ananassa
FAN24G2378 Fragaria x ananassa
FAN26G0059 Fragaria x ananassa
FAN26G2073 Fragaria x ananassa
FAN28G0315 Fragaria x ananassa
FvH4_1g07180 Fragaria vesca
FvH4_2g32020 Fragaria vesca
FvH4_6g16990 Fragaria vesca
FvH4_7g28310 Fragaria vesca
Glyma.05G222500 Glycine max
Glyma.08G029300 Glycine max
Glyma.09G152300 Glycine max
Glyma.14G093900 Glycine max
Glyma.16G203200 Glycine max
Glyma.17G229700 Glycine max
Glyma.U041300 Glycine max
Gohir.A06G089000 Gossypium hirsutum
Gohir.A07G039800 Gossypium hirsutum
Gohir.A08G245200 Gossypium hirsutum
Gohir.A13G193600 Gossypium hirsutum
Gohir.D06G088000 Gossypium hirsutum
Gohir.D07G043900 Gossypium hirsutum
Gohir.D08G266200 Gossypium hirsutum
Gohir.D13G199400 Gossypium hirsutum
Gorai.001G047000 Gossypium raimondii
Gorai.004G283900 Gossypium raimondii
Gorai.010G101600 Gossypium raimondii
Gorai.013G228100 Gossypium raimondii
GSVIVG01015222001 Vitis vinifera
GSVIVG01018483001 Vitis vinifera
HanXRQChr03g0060741 Helianthus annuus
HanXRQChr07g0202421 Helianthus annuus
HanXRQChr08g0214961 Helianthus annuus
HanXRQChr09g0238141 Helianthus annuus
Haze_13815 Corylus avellana
Haze_18199 Corylus avellana
Haze_25894 Corylus avellana
Hma1.2p1_0482F.1_g162560 Hydrangea macrophylla
Hma1.2p1_0800F.1_g220020 Hydrangea macrophylla
HPP92_001445 Vanilla planifolia
HPP92_001454 Vanilla planifolia
HPP92_001455 Vanilla planifolia
HPP92_005555 Vanilla planifolia
HPP92_010186 Vanilla planifolia
Hund04658 Selenicereus undatus
Hund06687 Selenicereus undatus
Hund25821 Selenicereus undatus
Lalb_Chr01g0008861 Lupinus albus
Lalb_Chr03g0033031 Lupinus albus
Lalb_Chr05g0223611 Lupinus albus
Lalb_Chr14g0367751 Lupinus albus
Lj2g0018168 Lotus japonicus
Lj4g0021490 Lotus japonicus
Lj5g0015997 Lotus japonicus
Lj7A673G65 Lonicera japonica
Lj8A543G13 Lonicera japonica
Lj8C35G10 Lonicera japonica
Lj8C548G0 Lonicera japonica
Lsat_1_v5_gn_3_133660 Lactuca sativa
Lsat_1_v5_gn_6_13321 Lactuca sativa
Lsat_1_v5_gn_6_74480 Lactuca sativa
Lsat_1_v5_gn_7_26281 Lactuca sativa
Lsat_1_v5_gn_7_37560 Lactuca sativa
Lsat_1_v5_gn_7_3760 Lactuca sativa
Lsat_1_v5_gn_8_8000 Lactuca sativa
Manes.03G032400 Manihot esculenta
Manes.14G032300 Manihot esculenta
Manes.16G079700 Manihot esculenta
Manes.16G103200 Manihot esculenta
Mapoly0034s0127 Marchantia polymorpha
Mapoly0108s0067 Marchantia polymorpha
MBI01_g02253_MAGBIO Magnolia biondii
MBI04_g37459_MAGBIO Magnolia biondii
MBI12_g34485_MAGBIO Magnolia biondii
MBI12_g43785_MAGBIO Magnolia biondii
MCO01G789 Micromonas commoda
MCO06G080 Micromonas commoda
MCO07G417 Micromonas commoda
MCO10G356 Micromonas commoda
MD01G1187400 Malus domestica
MD02G1076400 Malus domestica
MD07G1259700 Malus domestica
MD08G1043400 Malus domestica
MD15G1060700 Malus domestica
MD15G1204800 Malus domestica
Medtr0050s0160 Medicago truncatula
Medtr1g016450 Medicago truncatula
Medtr8g101640 Medicago truncatula
MELO3C006841.2 Cucumis melo
MELO3C010757.2 Cucumis melo
MELO3C015457.2 Cucumis melo
Migut.A00140 Erythranthe guttata
Migut.F00415 Erythranthe guttata
Migut.K00590 Erythranthe guttata
MSTRG.11662 Avicennia marina
MSTRG.25946 Avicennia marina
MSTRG.8793 Avicennia marina
Nitab4.5_0000012g0300 Nicotiana tabacum
Nitab4.5_0000072g0230 Nicotiana tabacum
Nitab4.5_0000713g0010 Nicotiana tabacum
Nitab4.5_0001584g0110 Nicotiana tabacum
Nitab4.5_0003752g0040 Nicotiana tabacum
Nitab4.5_0003752g0050 Nicotiana tabacum
Nitab4.5_0003984g0010 Nicotiana tabacum
Nitab4.5_0004087g0050 Nicotiana tabacum
Nitab4.5_0004456g0020 Nicotiana tabacum
Nitab4.5_0004456g0040 Nicotiana tabacum
Nn4g26451 Nelumbo nucifera
Nn6g34868 Nelumbo nucifera
Nn6g35437 Nelumbo nucifera
Nn8g38902 Nelumbo nucifera
Oeu018428.1 Olea europaea
Oeu018647.1 Olea europaea
Oeu023582.1 Olea europaea
Oeu030165.3 Olea europaea
Oeu030854.1 Olea europaea
Oeu036340.1 Olea europaea
Os03g0127900 Oryza sativa ssp. japonica
Os03g0127950 Oryza sativa ssp. japonica
Os06g0561200 Oryza sativa ssp. japonica
Peaxi162Scf00136g00006 Petunia axillaris
Peaxi162Scf00192g00922 Petunia axillaris
Peaxi162Scf00522g00113 Petunia axillaris
PGR042G2660 Punica granatum
PGR142G0668 Punica granatum
PGSC0003DMG400009808 Solanum tuberosum
PGSC0003DMG400029945 Solanum tuberosum
PGSC0003DMG400031029 Solanum tuberosum
Phvul.001G034400 Phaseolus vulgaris
Phvul.002G304300 Phaseolus vulgaris
Phvul.004G125900 Phaseolus vulgaris
Potri.006G230400 Populus trichocarpa
Potri.012G130500 Populus trichocarpa
Potri.015G132400 Populus trichocarpa
Potri.018G054100 Populus trichocarpa
Pp3c16_18040 Physcomitrium patens
Pp3c6_11300 Physcomitrium patens
PRCOL_00003690 Prasinoderma coloniale
PRCOL_00003933 Prasinoderma coloniale
PRCOL_00005599 Prasinoderma coloniale
Prupe.1G413300 Prunus persica
Prupe.2G283800 Prunus persica
Prupe.7G212100 Prunus persica
Psat0s10g0120 Pisum sativum
Psat1g109720 Pisum sativum
Psat6g020840 Pisum sativum
Psat7g019880 Pisum sativum
PSO063G6279 Papaver somniferum
PSO210G4066 Papaver somniferum
PSO210G7610 Papaver somniferum
PSO478G2447 Papaver somniferum
PSO782G1974 Papaver somniferum
PSO832G3697 Papaver somniferum
QL02p001335 Quercus lobata
QL02p062945 Quercus lobata
QL12p039342 Quercus lobata
RcHm_v2.0_Chr1g0313381 Rosa chinensis
RcHm_v2.0_Chr1g0375281 Rosa chinensis
RcHm_v2.0_Chr2g0093081 Rosa chinensis
RcHm_v2.0_Chr2g0155061 Rosa chinensis
RcHm_v2.0_Chr6g0310731 Rosa chinensis
Rhsim03G0233800 Rhododendron simsii
Rhsim09G0193900 Rhododendron simsii
Rhsim11G0044600 Rhododendron simsii
Sabra06G0178500 Salix brachista
Sabra12G0098200 Salix brachista
Sabra15G0145200 Salix brachista
SalBow1G0673 Salvia bowleyana
SalBow4G1098 Salvia bowleyana
SalBow4G2139 Salvia bowleyana
SalBow4G2631 Salvia bowleyana
Sc08g0008370 Simmondsia chinensis
Sc18g0001940 Simmondsia chinensis
Sc25g0000200 Simmondsia chinensis
Sed0005637 Sechium edule
Sed0014498 Sechium edule
Sed0022659 Sechium edule
SEGI_01624 Sequoiadendron giganteum
SEGI_10592 Sequoiadendron giganteum
SEGI_22774 Sequoiadendron giganteum
SEGI_29920 Sequoiadendron giganteum
SEGI_36848 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05451 Striga asiatica
SGA_v2.0_scaffold187G40260 Striga asiatica
SGA_v2.0_scaffold28G11943 Striga asiatica
SGA_v2.0_scaffold88G27224 Striga asiatica
SMO134G0151 Selaginella moellendorffii
SMO340G0314 Selaginella moellendorffii
Solyc03g007040.4 Solanum lycopersicum
Solyc05g026380.3 Solanum lycopersicum
Solyc07g026670.4 Solanum lycopersicum
Solyc08g065360.3 Solanum lycopersicum
Sopen03g003030 Solanum pennellii
Sopen05g022730 Solanum pennellii
Sopen07g014320 Solanum pennellii
Sopen08g018920 Solanum pennellii
Sp2g02290 Schrenkiella parvula
Sp3g32980 Schrenkiella parvula
Sp6g31800 Schrenkiella parvula
TAR375G0768 Trochodendron aralioides
TAR624G0031 Trochodendron aralioides
TAR629G0844 Trochodendron aralioides
TAR636G1331 Trochodendron aralioides
THA.LOC104799700 Tarenaya hassleriana
THA.LOC104811246 Tarenaya hassleriana
THA.LOC104814610 Tarenaya hassleriana
THA.LOC104825076 Tarenaya hassleriana
Thecc.03G163400 Theobroma cacao
Thecc.09G053000 Theobroma cacao
Thecc.09G091700 Theobroma cacao
Thhalv10001937m.g Eutrema salsugineum
Thhalv10013063m.g Eutrema salsugineum
Thhalv10023371m.g Eutrema salsugineum
TPR.G13009 Trifolium pratense
TPR.G25481 Trifolium pratense
TPR.G27719 Trifolium pratense
TWI14G0198 Tripterygium wilfordii
TWI32G0209 Tripterygium wilfordii
TWI34G1297 Tripterygium wilfordii
TWI34G1940 Tripterygium wilfordii
TWI63G0046 Tripterygium wilfordii
unitig_37.g11941 Utricularia gibba
unitig_88.g27681 Utricularia gibba
vmacro00146 Vaccinium macrocarpon
vmacro06281 Vaccinium macrocarpon
vmacro09883 Vaccinium macrocarpon
VMungo0251G0754 Vigna mungo
VMungo0464G1134 Vigna mungo
Zm00001eb002040 Zea mays
Zm00001eb277480 Zea mays
Zm00001eb384260 Zea mays

User provided reference genes

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