Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29350 Brassica napus
A04p08170 Brassica napus
Aa31LG2G9900 Aethionema arabicum
Aa31LG9G3600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2506 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3680 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3404 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.100 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.920 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3344 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3836 Anthoceros agrestis
Actinidia06617 Actinidia chinensis
Actinidia12160 Actinidia chinensis
Actinidia12161 Actinidia chinensis
Actinidia12162 Actinidia chinensis
Actinidia15715 Actinidia chinensis
Actinidia20074 Actinidia chinensis
Actinidia28425 Actinidia chinensis
Actinidia28426 Actinidia chinensis
Actinidia40395 Actinidia chinensis
Ah.03g137200 Amaranthus hybridus
Ah.06g187800 Amaranthus hybridus
AL2G16040 Arabidopsis lyrata
AL7G42490 Arabidopsis lyrata
Aqoxy143s001 Aquilegia oxysepala
Aqoxy3G02327 Aquilegia oxysepala
Aqoxy4G01804 Aquilegia oxysepala
Aqoxy6G00088 Aquilegia oxysepala
Aqoxy7G03556 Aquilegia oxysepala
Aqoxy7G03767 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11C4G0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.11LC84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.716UXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9B5RRL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DM2MGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TIS67U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV6UNV Arachis hypogaea
AT1G60560 Arabidopsis thaliana
AT4G13970 Arabidopsis thaliana
ATR0564G487 Amborella trichopoda
ATR0743G081 Amborella trichopoda
ATR0794G017 Amborella trichopoda
ATR0796G278 Amborella trichopoda
ATR1120G129 Amborella trichopoda
Atru.BG.38.p Acer truncatum
Atru.chr4.904 Acer truncatum
Atru.chr7.2313 Acer truncatum
Atru.chr7.2314 Acer truncatum
AUR62000833 Chenopodium quinoa
AUR62004129 Chenopodium quinoa
AUR62005141 Chenopodium quinoa
BcaB02g08642 Brassica carinata
BcaB04g20272 Brassica carinata
BcaC02g09375 Brassica carinata
BcaC09g49393 Brassica carinata
BolC1t03677H Brassica oleracea
BolC4t25768H Brassica oleracea
BraA01t03067Z Brassica rapa
BraA04t16507Z Brassica rapa
C01p37130 Brassica napus
C04p41880 Brassica napus
CAN.G1312.11 Capsicum annuum
CAN.G16.5 Capsicum annuum
CAN.G16.6 Capsicum annuum
CAN.G1609.12 Capsicum annuum
CANSAT01G2044 Cannabis sativa
CANSAT11G1346 Cannabis sativa
CANSAT25G0823 Cannabis sativa
CARHR052430 Cardamine hirsuta
CARHR219920 Cardamine hirsuta
Carub.0002s0476 Capsella rubella
Carub.0007s2847 Capsella rubella
Ca_03893_v3 Cicer arietinum L.
Ca_15691_v3 Cicer arietinum L.
Ca_24117_v3 Cicer arietinum L.
Cc01_g06560 Coffea canephora
Cc06_g21000 Coffea canephora
CDE01G0459 Ceratophyllum demersum
CDE02G0448 Ceratophyllum demersum
CDE02G2653 Ceratophyllum demersum
Cfa002896 Carpinus fangiana
Cfa011099 Carpinus fangiana
Cfa011100 Carpinus fangiana
Cfa011101 Carpinus fangiana
Ciclev10000430m.g Citrus clementina
Ciclev10010703m.g Citrus clementina
Ciclev10018658m.g Citrus clementina
CiPaw.04G082000 Carya illinoinensis
CiPaw.08G016500 Carya illinoinensis
CiPaw.13G028700 Carya illinoinensis
ClCG01G015370 Citrullus lanatus
ClCG05G017260 Citrullus lanatus
ClCG09G006570 Citrullus lanatus
COL.COLO4_12438 Corchorus olitorius
COL.COLO4_16921 Corchorus olitorius
COL.COLO4_24075 Corchorus olitorius
Cpa.g.sc101.36 Carica papaya
Cpa.g.sc205.34 Carica papaya
Cpa.g.sc90.38 Carica papaya
CsaV3_1G037310 Cucumis sativus L.
CsaV3_3G046740 Cucumis sativus L.
CsaV3_6G041590 Cucumis sativus L.
CSS0003892 Camellia sinensis var. sinensis
CSS0004749 Camellia sinensis var. sinensis
CSS0013473 Camellia sinensis var. sinensis
CSS0040695 Camellia sinensis var. sinensis
CSS0043680 Camellia sinensis var. sinensis
CSS0043942 Camellia sinensis var. sinensis
CSS0050238 Camellia sinensis var. sinensis
DCAR_001212 Daucus carota
DCAR_029365 Daucus carota
Dinv07121 Davidia involucrata
Dinv24365 Davidia involucrata
Dinv35874 Davidia involucrata
Dinv43642 Davidia involucrata
Dinv43643 Davidia involucrata
Dinv43644 Davidia involucrata
Dinv44080 Davidia involucrata
Duzib052G0647 Durio zibethinus
Duzib068G1135 Durio zibethinus
Duzib068G1449 Durio zibethinus
Duzib138G0904 Durio zibethinus
Duzib168G0528 Durio zibethinus
Duzib205G0094 Durio zibethinus
ECA232G1153 Erigeron canadensis
ECA238G2087 Erigeron canadensis
ECA238G3607 Erigeron canadensis
ECA240G3483 Erigeron canadensis
ECA246G4675 Erigeron canadensis
EL10Ac1g00800 Beta vulgaris
EL10Ac4g09347 Beta vulgaris
Eucgr.C02873 Eucalyptus grandis
Eucgr.D01843 Eucalyptus grandis
Eucgr.I00201 Eucalyptus grandis
FAN11G0572 Fragaria x ananassa
FAN15G1572 Fragaria x ananassa
FAN16G2382 Fragaria x ananassa
FAN16G3177 Fragaria x ananassa
FAN20G0764 Fragaria x ananassa
FAN20G1418 Fragaria x ananassa
FAN20G2058 Fragaria x ananassa
FAN21G3272 Fragaria x ananassa
FAN24G2643 Fragaria x ananassa
FAN25G0662 Fragaria x ananassa
FAN25G1541 Fragaria x ananassa
FAN25G1850 Fragaria x ananassa
FAN25G2066 Fragaria x ananassa
FAN26G0877 Fragaria x ananassa
FAN27G2460 Fragaria x ananassa
FAN28G2098 Fragaria x ananassa
FvH4_1g11391 Fragaria vesca
FvH4_2g30231 Fragaria vesca
FvH4_3g45511 Fragaria vesca
FvH4_5g30251 Fragaria vesca
Glyma.04G073100 Glycine max
Glyma.06G074140 Glycine max
Glyma.06G074180 Glycine max
Glyma.07G232200 Glycine max
Glyma.08G226867 Glycine max
Glyma.08G226933 Glycine max
Glyma.14G089400 Glycine max
Glyma.14G089900 Glycine max
Glyma.18G182100 Glycine max
Glyma.20G041100 Glycine max
Gohir.A03G000028 Gossypium hirsutum
Gohir.A06G048600 Gossypium hirsutum
Gohir.A08G059600 Gossypium hirsutum
Gohir.A12G205500 Gossypium hirsutum
Gohir.D03G176650 Gossypium hirsutum
Gohir.D06G048433 Gossypium hirsutum
Gohir.D08G068800 Gossypium hirsutum
Gohir.D12G207900 Gossypium hirsutum
Gorai.003G185900 Gossypium raimondii
Gorai.004G072100 Gossypium raimondii
Gorai.008G223400 Gossypium raimondii
Gorai.010G054400 Gossypium raimondii
GSVIVG01026479001 Vitis vinifera
GSVIVG01027211001 Vitis vinifera
GSVIVG01035741001 Vitis vinifera
HanXRQChr03g0087381 Helianthus annuus
HanXRQChr11g0343831 Helianthus annuus
Haze_01785 Corylus avellana
Haze_02766 Corylus avellana
Haze_03050 Corylus avellana
Haze_16378 Corylus avellana
Haze_17189 Corylus avellana
Haze_21643 Corylus avellana
Haze_25239 Corylus avellana
Hma1.2p1_0004F.1_g003970 Hydrangea macrophylla
Hma1.2p1_0476F.1_g160800 Hydrangea macrophylla
HPP92_011673 Vanilla planifolia
HPP92_013942 Vanilla planifolia
Hund13003 Selenicereus undatus
Hund27399 Selenicereus undatus
Lalb_Chr03g0032501 Lupinus albus
Lalb_Chr08g0234411 Lupinus albus
Lalb_Chr23g0268961 Lupinus albus
Lalb_Chr23g0268971 Lupinus albus
Lj1g0001011 Lotus japonicus
Lj3g0023393 Lotus japonicus
Lj4A838T20 Lonicera japonica
Lj4C839T10 Lonicera japonica
Lj6g0002984 Lotus japonicus
Lj8A608T26 Lonicera japonica
Lj8C54G3 Lonicera japonica
Lsat_1_v5_gn_1_111740 Lactuca sativa
Lsat_1_v5_gn_6_88640 Lactuca sativa
Manes.05G052400 Manihot esculenta
Manes.05G206200 Manihot esculenta
Manes.16G068800 Manihot esculenta
Mapoly0005s0223 Marchantia polymorpha
Mapoly0083s0021 Marchantia polymorpha
MBI01_g26686_MAGBIO Magnolia biondii
MBI04_g18156_MAGBIO Magnolia biondii
MBI04_g43356_MAGBIO Magnolia biondii
MBI10_g33136_MAGBIO Magnolia biondii
MD08G1135300 Malus domestica
MD09G1283600 Malus domestica
MD14G1040800 Malus domestica
MD15G1114100 Malus domestica
MD15G1241900 Malus domestica
MD17G1276900 Malus domestica
MD17G1277000 Malus domestica
Medtr3g108220 Medicago truncatula
Medtr4g080580 Medicago truncatula
Medtr5g037070 Medicago truncatula
Medtr7g082990 Medicago truncatula
Medtr8g043560 Medicago truncatula
Medtr8g043760 Medicago truncatula
MELO3C002810.2 Cucumis melo
MELO3C002811.2 Cucumis melo
MELO3C003661.2 Cucumis melo
MELO3C008061.2 Cucumis melo
Migut.A00263 Erythranthe guttata
Migut.B00300 Erythranthe guttata
Migut.D01709 Erythranthe guttata
Migut.H00703 Erythranthe guttata
Migut.J00169 Erythranthe guttata
Migut.L00409 Erythranthe guttata
Migut.L00505 Erythranthe guttata
Migut.L01072 Erythranthe guttata
MSTRG.16771 Avicennia marina
MSTRG.2650 Avicennia marina
Nitab4.5_0002601g0050 Nicotiana tabacum
Nitab4.5_0003780g0020 Nicotiana tabacum
Nitab4.5_0009564g0020 Nicotiana tabacum
Nitab4.5_0024546g0010 Nicotiana tabacum
Nn1g06270 Nelumbo nucifera
Nn1g06271 Nelumbo nucifera
Nn1g06272 Nelumbo nucifera
Nn3g16145 Nelumbo nucifera
Nn3g17061 Nelumbo nucifera
Nn8g39238 Nelumbo nucifera
Oeu004241.1 Olea europaea
Oeu019411.1 Olea europaea
Oeu019412.2 Olea europaea
Oeu021927.1 Olea europaea
Os07g0227700 Oryza sativa ssp. japonica
Os09g0309100 Oryza sativa ssp. japonica
Peaxi162Scf00346g00315 Petunia axillaris
Peaxi162Scf00528g00014 Petunia axillaris
Peaxi162Scf00528g00015 Petunia axillaris
PGR044G0381 Punica granatum
PGR102G2019 Punica granatum
PGR119G1303 Punica granatum
PGSC0003DMG400011498 Solanum tuberosum
PGSC0003DMG402026234 Solanum tuberosum
Phvul.006G014600 Phaseolus vulgaris
Phvul.009G098900 Phaseolus vulgaris
Phvul.009G233100 Phaseolus vulgaris
Phvul.011G186500 Phaseolus vulgaris
Potri.002G140800 Populus trichocarpa
Potri.006G245800 Populus trichocarpa
Potri.007G106000 Populus trichocarpa
Potri.014G054600 Populus trichocarpa
Prupe.1G465300 Prunus persica
Prupe.2G124200 Prunus persica
Prupe.7G172200 Prunus persica
Psat4g087160 Pisum sativum
Psat4g141720 Pisum sativum
PSO063G7251 Papaver somniferum
PSO170G3843 Papaver somniferum
PSO210G1849 Papaver somniferum
PSO210G6686 Papaver somniferum
PSO339G0691 Papaver somniferum
PSO384G2272 Papaver somniferum
PSO407G0098 Papaver somniferum
PSO782G3910 Papaver somniferum
QL02p001677 Quercus lobata
QL04p033413 Quercus lobata
QL10p050493 Quercus lobata
QL12p031079 Quercus lobata
RcHm_v2.0_Chr2g0098931 Rosa chinensis
RcHm_v2.0_Chr2g0098941 Rosa chinensis
RcHm_v2.0_Chr4g0406971 Rosa chinensis
RcHm_v2.0_Chr5g0069181 Rosa chinensis
RcHm_v2.0_Chr5g0069191 Rosa chinensis
RcHm_v2.0_Chr5g0083661 Rosa chinensis
RcHm_v2.0_Chr6g0312571 Rosa chinensis
RcHm_v2.0_Chr6g0312641 Rosa chinensis
RcHm_v2.0_Chr7g0185761 Rosa chinensis
RcHm_v2.0_Chr7g0192171 Rosa chinensis
RcHm_v2.0_Chr7g0219821 Rosa chinensis
Rhsim01G0228400 Rhododendron simsii
Rhsim07G0034200 Rhododendron simsii
Rhsim07G0154700 Rhododendron simsii
Sabra02G0109900 Salix brachista
Sabra06G0192300 Salix brachista
Sabra07G0086800 Salix brachista
Sabra14G0040400 Salix brachista
Sc07g0007690 Simmondsia chinensis
Sc26g0001430 Simmondsia chinensis
Sed0000781 Sechium edule
Sed0002053 Sechium edule
SEGI_00312 Sequoiadendron giganteum
SEGI_00950 Sequoiadendron giganteum
SEGI_01025 Sequoiadendron giganteum
SEGI_01246 Sequoiadendron giganteum
SEGI_02876 Sequoiadendron giganteum
SEGI_03676 Sequoiadendron giganteum
SEGI_04940 Sequoiadendron giganteum
SEGI_05058 Sequoiadendron giganteum
SEGI_06085 Sequoiadendron giganteum
SEGI_08363 Sequoiadendron giganteum
SEGI_08942 Sequoiadendron giganteum
SEGI_09160 Sequoiadendron giganteum
SEGI_12325 Sequoiadendron giganteum
SEGI_13498 Sequoiadendron giganteum
SEGI_14701 Sequoiadendron giganteum
SEGI_15038 Sequoiadendron giganteum
SEGI_15792 Sequoiadendron giganteum
SEGI_19111 Sequoiadendron giganteum
SEGI_20162 Sequoiadendron giganteum
SEGI_21587 Sequoiadendron giganteum
SEGI_22375 Sequoiadendron giganteum
SEGI_23159 Sequoiadendron giganteum
SEGI_24382 Sequoiadendron giganteum
SEGI_24919 Sequoiadendron giganteum
SEGI_25093 Sequoiadendron giganteum
SEGI_25939 Sequoiadendron giganteum
SEGI_26465 Sequoiadendron giganteum
SEGI_26653 Sequoiadendron giganteum
SEGI_27875 Sequoiadendron giganteum
SEGI_29626 Sequoiadendron giganteum
SEGI_30226 Sequoiadendron giganteum
SEGI_31541 Sequoiadendron giganteum
SEGI_32226 Sequoiadendron giganteum
SEGI_34024 Sequoiadendron giganteum
SEGI_34258 Sequoiadendron giganteum
SEGI_36155 Sequoiadendron giganteum
SEGI_37585 Sequoiadendron giganteum
SEGI_37589 Sequoiadendron giganteum
SEGI_37716 Sequoiadendron giganteum
SEGI_38298 Sequoiadendron giganteum
SEGI_38797 Sequoiadendron giganteum
SEGI_38812 Sequoiadendron giganteum
SEGI_38937 Sequoiadendron giganteum
SEGI_39700 Sequoiadendron giganteum
SEGI_40861 Sequoiadendron giganteum
SEGI_41398 Sequoiadendron giganteum
SGA_v2.0_scaffold237G43810 Striga asiatica
SGA_v2.0_scaffold32G13122 Striga asiatica
SGA_v2.0_scaffold370G50116 Striga asiatica
SHI11468 Sapria himalayana
SHI25092 Sapria himalayana
SHI49559 Sapria himalayana
Solyc04g009970.4 Solanum lycopersicum
Solyc08g078230.4 Solanum lycopersicum
Sopen04g005100 Solanum pennellii
Sopen08g026740 Solanum pennellii
Sp2g04190 Schrenkiella parvula
Sp2g07340 Schrenkiella parvula
Sp7g11760 Schrenkiella parvula
TAR628G1543 Trochodendron aralioides
TAR636G1043 Trochodendron aralioides
TAR636G2712 Trochodendron aralioides
THA.LOC104815571 Tarenaya hassleriana
Thecc.01G389500 Theobroma cacao
Thecc.03G311300 Theobroma cacao
Thecc.09G143200 Theobroma cacao
Thhalv10023307m.g Eutrema salsugineum
Thhalv10024472m.g Eutrema salsugineum
TPR.G10458 Trifolium pratense
TPR.G12450 Trifolium pratense
TPR.G25039 Trifolium pratense
TPR.G35201 Trifolium pratense
TPR.G36252 Trifolium pratense
TPR.G535 Trifolium pratense
TWI14G0381 Tripterygium wilfordii
TWI14G1174 Tripterygium wilfordii
TWI32G0587 Tripterygium wilfordii
unitig_699.g19731 Utricularia gibba
unitig_744.g24242 Utricularia gibba
vmacro05463 Vaccinium macrocarpon
vmacro11991 Vaccinium macrocarpon
vmacro11992 Vaccinium macrocarpon
vmacro12797 Vaccinium macrocarpon
vmacro13480 Vaccinium macrocarpon
VMungo0540G1315 Vigna mungo
VMungo1127G1636 Vigna mungo
VMungo1309G2409 Vigna mungo
Zm00001eb065370 Zea mays
Zm00001eb116520 Zea mays
Zm00001eb116570 Zea mays
Zm00001eb210830 Zea mays

User provided reference genes

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