Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35050 Brassica napus
A02p14040 Brassica napus
A05p29940 Brassica napus
A06p03430 Brassica napus
A07p05700 Brassica napus
A07p05850 Brassica napus
A07p33830 Brassica napus
Aa31LG10G4130 Aethionema arabicum
Aa31LG2G3570 Aethionema arabicum
Aa31LG8G6440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.471 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis
Actinidia04394 Actinidia chinensis
Actinidia27997 Actinidia chinensis
Actinidia27998 Actinidia chinensis
Actinidia27999 Actinidia chinensis
Actinidia34354 Actinidia chinensis
Ah.01g007020 Amaranthus hybridus
Ah.01g007040 Amaranthus hybridus
Ah.10g037380 Amaranthus hybridus
AL1G57570 Arabidopsis lyrata
AL2G25700 Arabidopsis lyrata
AL3G33100 Arabidopsis lyrata
AL3G46300 Arabidopsis lyrata
Aqoxy1G00264 Aquilegia oxysepala
Aqoxy1G00265 Aquilegia oxysepala
Aqoxy335s003 Aquilegia oxysepala
Aqoxy335s004 Aquilegia oxysepala
Aqoxy5G00361 Aquilegia oxysepala
Aqoxy6G02530 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IG7GQE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2NHXZ Arachis hypogaea
AT1G50000 Arabidopsis thaliana
AT2G14660 Arabidopsis thaliana
AT3G19660 Arabidopsis thaliana
ATR0739G196 Amborella trichopoda
ATR0739G203 Amborella trichopoda
Atru.chr5.2303 Acer truncatum
Atru.chr5.2305 Acer truncatum
Atru.chr5.2306 Acer truncatum
Atru.chr8.777 Acer truncatum
AUR62004510 Chenopodium quinoa
AUR62008943 Chenopodium quinoa
AUR62023444 Chenopodium quinoa
AUR62027019 Chenopodium quinoa
AUR62027022 Chenopodium quinoa
AUR62030859 Chenopodium quinoa
AUR62030863 Chenopodium quinoa
AUR62030864 Chenopodium quinoa
BcaB03g16261 Brassica carinata
BcaB05g22586 Brassica carinata
BcaB06g26036 Brassica carinata
BcaB07g33452 Brassica carinata
BcaC05g27454 Brassica carinata
BcaC05g27456 Brassica carinata
BcaC05g28437 Brassica carinata
BcaC06g36001 Brassica carinata
BcaC08g43178 Brassica carinata
BolC1t04412H Brassica oleracea
BolC2t08417H Brassica oleracea
BolC5t33243H Brassica oleracea
BolC6t35607H Brassica oleracea
BolC6t39129H Brassica oleracea
BolC7t41323H Brassica oleracea
BraA01t03586Z Brassica rapa
BraA02t06465Z Brassica rapa
BraA05t21839Z Brassica rapa
BraA06t23551Z Brassica rapa
BraA07t28366Z Brassica rapa
BraA07t28378Z Brassica rapa
BraA07t31009Z Brassica rapa
C01p44470 Brassica napus
C02p22640 Brassica napus
C05p34140 Brassica napus
C05p45170 Brassica napus
C06p04780 Brassica napus
C06p43090 Brassica napus
C07p09120 Brassica napus
CAN.G1427.5 Capsicum annuum
CAN.G497.17 Capsicum annuum
CAN.G606.68 Capsicum annuum
CAN.G606.69 Capsicum annuum
CANSAT25G0020 Cannabis sativa
CANSAT25G2862 Cannabis sativa
CANSAT25G3386 Cannabis sativa
CARHR040100 Cardamine hirsuta
CARHR059650 Cardamine hirsuta
CARHR095120 Cardamine hirsuta
CARHR286340 Cardamine hirsuta
Carub.0002s1347 Capsella rubella
Carub.0003s1953 Capsella rubella
Carub.0003s2869 Capsella rubella
Carub.0151s0002 Capsella rubella
Ca_11027_v3 Cicer arietinum L.
Ca_28940_v3 Cicer arietinum L.
CBR_g38178 Chara braunii
CBR_g48696 Chara braunii
Cc00_g17980 Coffea canephora
Cc00_g17990 Coffea canephora
Cc00_g18000 Coffea canephora
Cc07_g04900 Coffea canephora
CDE04G1257 Ceratophyllum demersum
CDE07G0917 Ceratophyllum demersum
Cfa004703 Carpinus fangiana
Cfa004705 Carpinus fangiana
Cfa004706 Carpinus fangiana
Cfa026913 Carpinus fangiana
Ciclev10029760m.g Citrus clementina
Ciclev10030269m.g Citrus clementina
CiPaw.03G006700 Carya illinoinensis
CiPaw.04G004300 Carya illinoinensis
CiPaw.05G020400 Carya illinoinensis
CiPaw.05G020500 Carya illinoinensis
CiPaw.06G164200 Carya illinoinensis
ClCG02G007120 Citrullus lanatus
ClCG10G010070 Citrullus lanatus
ClCG10G010080 Citrullus lanatus
COL.COLO4_02194 Corchorus olitorius
COL.COLO4_08509 Corchorus olitorius
COL.COLO4_32488 Corchorus olitorius
COL.COLO4_32489 Corchorus olitorius
COL.COLO4_32490 Corchorus olitorius
Cpa.g.sc1.252 Carica papaya
Cpa.g.sc106.34 Carica papaya
Cpa.g.sc91.59 Carica papaya
Cre03.g175800 Chlamydomonas reinhardtii
Cre12.g497650 Chlamydomonas reinhardtii
CsaV3_4G000110 Cucumis sativus L.
CsaV3_4G000120 Cucumis sativus L.
CsaV3_7G007700 Cucumis sativus L.
CSS0000365 Camellia sinensis var. sinensis
CSS0003584 Camellia sinensis var. sinensis
CSS0005518 Camellia sinensis var. sinensis
CSS0011887 Camellia sinensis var. sinensis
CSS0019733 Camellia sinensis var. sinensis
CSS0039733 Camellia sinensis var. sinensis
DCAR_001738 Daucus carota
DCAR_010979 Daucus carota
DCAR_010982 Daucus carota
DCAR_021945 Daucus carota
Dinv09541 Davidia involucrata
Duzib052G0823 Durio zibethinus
Duzib132G0295 Durio zibethinus
Duzib132G0829 Durio zibethinus
Duzib248G0869 Durio zibethinus
ECA240G3857 Erigeron canadensis
ECA246G2394 Erigeron canadensis
EL10Ac1g00245 Beta vulgaris
EL10Ac9g22180 Beta vulgaris
EL10Ac9g22181 Beta vulgaris
EL10Ac9g22185 Beta vulgaris
Eucgr.I02108 Eucalyptus grandis
Eucgr.I02493 Eucalyptus grandis
FAN05G3918 Fragaria x ananassa
FAN14G3562 Fragaria x ananassa
FAN15G0246 Fragaria x ananassa
FAN15G0831 Fragaria x ananassa
FAN15G2988 Fragaria x ananassa
FAN24G0164 Fragaria x ananassa
FAN24G0656 Fragaria x ananassa
FAN24G1144 Fragaria x ananassa
FAN24G1537 Fragaria x ananassa
FAN27G2772 Fragaria x ananassa
FvH4_2g03350 Fragaria vesca
FvH4_2g03390 Fragaria vesca
FvH4_2g03440 Fragaria vesca
FvH4_2g03450 Fragaria vesca
FvH4_6g45650 Fragaria vesca
Glyma.01G241600 Glycine max
Glyma.01G241700 Glycine max
Glyma.13G049300 Glycine max
Glyma.18G279700 Glycine max
Glyma.19G042000 Glycine max
Glyma.20G135600 Glycine max
Gohir.A03G181200 Gossypium hirsutum
Gohir.A07G073000 Gossypium hirsutum
Gohir.A12G018701 Gossypium hirsutum
Gohir.A13G047600 Gossypium hirsutum
Gohir.A13G047700 Gossypium hirsutum
Gohir.D02G203199 Gossypium hirsutum
Gohir.D07G077600 Gossypium hirsutum
Gohir.D12G019200 Gossypium hirsutum
Gohir.D13G045900 Gossypium hirsutum
Gohir.D13G046000 Gossypium hirsutum
Gorai.001G082100 Gossypium raimondii
Gorai.005G230000 Gossypium raimondii
Gorai.008G019500 Gossypium raimondii
Gorai.013G051400 Gossypium raimondii
Gorai.013G051500 Gossypium raimondii
GSVIVG01037056001 Vitis vinifera
HanXRQChr03g0072921 Helianthus annuus
HanXRQChr10g0283701 Helianthus annuus
HanXRQChr10g0305111 Helianthus annuus
Haze_10309 Corylus avellana
Haze_10310 Corylus avellana
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198120 Hydrangea macrophylla
Hma1.2p1_1051F.1_g252100 Hydrangea macrophylla
Hma1.2p1_2793F.1_g328635 Hydrangea macrophylla
HPP92_015706 Vanilla planifolia
HPP92_026588 Vanilla planifolia
HPP92_026656 Vanilla planifolia
Lalb_Chr02g0144911 Lupinus albus
Lalb_Chr06g0165001 Lupinus albus
Lalb_Chr10g0092401 Lupinus albus
Lalb_Chr17g0336571 Lupinus albus
Lalb_Chr20g0110071 Lupinus albus
Lj1g0007549 Lotus japonicus
Lj1g0010962 Lotus japonicus
Lj1g0020001 Lotus japonicus
Lj1g0027535 Lotus japonicus
Lj9A337T44 Lonicera japonica
Lj9P337T35 Lonicera japonica
Lsat_1_v5_gn_3_94821 Lactuca sativa
Lsat_1_v5_gn_4_175441 Lactuca sativa
Lsat_1_v5_gn_5_117140 Lactuca sativa
Lsat_1_v5_gn_9_113380 Lactuca sativa
Lsat_1_v5_gn_9_113420 Lactuca sativa
Manes.01G107200 Manihot esculenta
Manes.02G064800 Manihot esculenta
Manes.07G057400 Manihot esculenta
Manes.07G057600 Manihot esculenta
Manes.10G086400 Manihot esculenta
Manes.10G086502 Manihot esculenta
Manes.10G086600 Manihot esculenta
Mapoly0081s0053 Marchantia polymorpha
Mapoly0117s0004 Marchantia polymorpha
MBI16_g16470_MAGBIO Magnolia biondii
MBI16_g27033_MAGBIO Magnolia biondii
MBI16_g39097_MAGBIO Magnolia biondii
MCO02G312 Micromonas commoda
MCO07G364 Micromonas commoda
MD05G1104700 Malus domestica
MD05G1105400 Malus domestica
MD10G1109000 Malus domestica
MD10G1109100 Malus domestica
MD10G1109900 Malus domestica
Medtr1g106055 Medicago truncatula
Medtr5g005330 Medicago truncatula
Medtr5g005350 Medicago truncatula
Medtr6g016890 Medicago truncatula
Medtr7g019160 Medicago truncatula
Medtr8g027785 Medicago truncatula
MELO3C018020.2 Cucumis melo
MELO3C018021.2 Cucumis melo
MELO3C018530.2 Cucumis melo
MELO3C023781.2 Cucumis melo
Migut.B00459 Erythranthe guttata
Migut.B00460 Erythranthe guttata
Migut.B00461 Erythranthe guttata
Migut.H00549 Erythranthe guttata
MSTRG.20236 Avicennia marina
MSTRG.20237 Avicennia marina
MSTRG.23836 Avicennia marina
Nitab4.5_0001099g0070 Nicotiana tabacum
Nitab4.5_0001099g0080 Nicotiana tabacum
Nitab4.5_0001458g0020 Nicotiana tabacum
Nitab4.5_0001458g0030 Nicotiana tabacum
Nitab4.5_0010145g0020 Nicotiana tabacum
Nitab4.5_0010145g0040 Nicotiana tabacum
Nitab4.5_0011705g0020 Nicotiana tabacum
Nn3g17638 Nelumbo nucifera
Nn4g23635 Nelumbo nucifera
Nn5g30644 Nelumbo nucifera
Nn5g30645 Nelumbo nucifera
Nn5g30651 Nelumbo nucifera
Nn6g34513 Nelumbo nucifera
Oeu021354.1 Olea europaea
Oeu032864.1 Olea europaea
Oeu034165.1 Olea europaea
Oeu037288.1 Olea europaea
Oeu037289.1 Olea europaea
Os03g0676100 Oryza sativa ssp. japonica
Os03g0729700 Oryza sativa ssp. japonica
Os08g0485300 Oryza sativa ssp. japonica
Peaxi162Scf00003g02812 Petunia axillaris
Peaxi162Scf00003g02832 Petunia axillaris
Peaxi162Scf00016g03013 Petunia axillaris
Peaxi162Scf00016g03020 Petunia axillaris
PGR142G1084 Punica granatum
PGR142G3835 Punica granatum
PGR142G4268 Punica granatum
PGSC0003DMG400010048 Solanum tuberosum
PGSC0003DMG400012835 Solanum tuberosum
PGSC0003DMG400012841 Solanum tuberosum
PGSC0003DMG400019661 Solanum tuberosum
PGSC0003DMG400025934 Solanum tuberosum
PGSC0003DMG402025733 Solanum tuberosum
Phvul.002G050900 Phaseolus vulgaris
Phvul.002G051000 Phaseolus vulgaris
Phvul.004G048600 Phaseolus vulgaris
Phvul.007G046900 Phaseolus vulgaris
Phvul.008G021300 Phaseolus vulgaris
Potri.001G290100 Populus trichocarpa
Potri.001G290200 Populus trichocarpa
Potri.004G105800 Populus trichocarpa
Potri.004G105900 Populus trichocarpa
Potri.009G085700 Populus trichocarpa
Potri.009G085800 Populus trichocarpa
Potri.017G109800 Populus trichocarpa
Potri.017G109900 Populus trichocarpa
Pp3c10_11040 Physcomitrium patens
Pp3c3_17050 Physcomitrium patens
PRCOL_00000434 Prasinoderma coloniale
Prupe.3G242600 Prunus persica
Prupe.8G149100 Prunus persica
Prupe.8G149200 Prunus persica
Prupe.8G149700 Prunus persica
Prupe.8G150000 Prunus persica
Psat0s6663g0040 Pisum sativum
Psat4g228720 Pisum sativum
Psat6g214440 Pisum sativum
PSO017G1092 Papaver somniferum
PSO017G7292 Papaver somniferum
PSO170G4708 Papaver somniferum
PSO170G6576 Papaver somniferum
PSO541G2903 Papaver somniferum
PSO541G3645 Papaver somniferum
PSO675G4557 Papaver somniferum
QL02p053549 Quercus lobata
QL11p029372 Quercus lobata
QL11p029473 Quercus lobata
QL11p029492 Quercus lobata
RcHm_v2.0_Chr2g0163791 Rosa chinensis
RcHm_v2.0_Chr6g0248511 Rosa chinensis
RcHm_v2.0_Chr6g0248571 Rosa chinensis
RcHm_v2.0_Chr6g0248601 Rosa chinensis
RcHm_v2.0_Chr6g0248611 Rosa chinensis
Rhsim05G0092200 Rhododendron simsii
Rhsim05G0092700 Rhododendron simsii
Rhsim05G0092800 Rhododendron simsii
RhsimUnG0183600 Rhododendron simsii
Sabra09G0065800 Salix brachista
Sabra16G0181700 Salix brachista
Sabra17G0091900 Salix brachista
SalBow1G1780 Salvia bowleyana
SalBow1G7911 Salvia bowleyana
SalBow6G4520 Salvia bowleyana
SalBow6G5155 Salvia bowleyana
Sc01g0002530 Simmondsia chinensis
Sc08g0004350 Simmondsia chinensis
Sc14g0002500 Simmondsia chinensis
Sed0001597 Sechium edule
Sed0001915 Sechium edule
Sed0003724 Sechium edule
Sed0007286 Sechium edule
Sed0014020 Sechium edule
Sed0014293 Sechium edule
SEGI_02829 Sequoiadendron giganteum
SEGI_07672 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43060 Striga asiatica
SGA_v2.0_scaffold32G12987 Striga asiatica
SHI05019 Sapria himalayana
SHI05029 Sapria himalayana
SMO358G0428 Selaginella moellendorffii
Solyc01g106880.3 Solanum lycopersicum
Solyc01g106890.2 Solanum lycopersicum
Solyc02g089660.2 Solanum lycopersicum
Solyc10g048190.1 Solanum lycopersicum
Sopen01g049160 Solanum pennellii
Sopen01g049170 Solanum pennellii
Sopen10g020220 Solanum pennellii
Sp1g36840 Schrenkiella parvula
Sp3g27770 Schrenkiella parvula
Sp5g22130 Schrenkiella parvula
SpUn0137_0040 Schrenkiella parvula
TAR371G0241 Trochodendron aralioides
TAR376G0809 Trochodendron aralioides
TAR376G0823 Trochodendron aralioides
TAR625G0338 Trochodendron aralioides
TAR625G0364 Trochodendron aralioides
TAR628G0963 Trochodendron aralioides
TAR628G1281 Trochodendron aralioides
TAR629G2968 Trochodendron aralioides
THA.LOC104803443 Tarenaya hassleriana
THA.LOC104804397 Tarenaya hassleriana
THA.LOC104809178 Tarenaya hassleriana
THA.LOC104822692 Tarenaya hassleriana
THA.LOC104826495 Tarenaya hassleriana
THA.LOC104826496 Tarenaya hassleriana
Thecc.02G119400 Theobroma cacao
Thecc.02G119500 Theobroma cacao
Thecc.02G119600 Theobroma cacao
Thecc.04G144700 Theobroma cacao
Thhalv10011739m.g Eutrema salsugineum
Thhalv10012254m.g Eutrema salsugineum
Thhalv10019331m.g Eutrema salsugineum
Thhalv10023010m.g Eutrema salsugineum
TPR.G21139 Trifolium pratense
TPR.G3300 Trifolium pratense
TPR.G8318 Trifolium pratense
TPR.G8320 Trifolium pratense
TWI14G1141 Tripterygium wilfordii
TWI23G0417 Tripterygium wilfordii
TWI59G0092 Tripterygium wilfordii
TWI59G0351 Tripterygium wilfordii
unitig_0.g633 Utricularia gibba
unitig_744.g24207 Utricularia gibba
vmacro22256 Vaccinium macrocarpon
VMungo0720G2114 Vigna mungo
VMungo1215G1258 Vigna mungo
Zm00001eb217400 Zea mays

User provided reference genes

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