Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13020 Brassica napus
A07p35660 Brassica napus
A08p27430 Brassica napus
A08p32160 Brassica napus
A09p40010 Brassica napus
A09p62600 Brassica napus
Aa31LG1G1090 Aethionema arabicum
Aa31LG4G11510 Aethionema arabicum
Aa31LG7G8470 Aethionema arabicum
Actinidia01963 Actinidia chinensis
Actinidia01970 Actinidia chinensis
Actinidia04855 Actinidia chinensis
Actinidia12316 Actinidia chinensis
Actinidia19923 Actinidia chinensis
Actinidia31950 Actinidia chinensis
Actinidia33240 Actinidia chinensis
Ah.02g126590 Amaranthus hybridus
Ah.11g048120 Amaranthus hybridus
AL1G25780 Arabidopsis lyrata
AL1G39110 Arabidopsis lyrata
AL2G28470 Arabidopsis lyrata
Aqoxy3G00455 Aquilegia oxysepala
Aqoxy3G03549 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B15RMV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BZ8U3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4K7T0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PQMP7V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PU8JJL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SK753M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ULDL2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8C8ZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZTLC2M Arachis hypogaea
AT1G13940 Arabidopsis thaliana
AT1G26620 Arabidopsis thaliana
AT1G69360 Arabidopsis thaliana
ATR0111G010 Amborella trichopoda
Atru.chr11.1694 Acer truncatum
Atru.chr9.313 Acer truncatum
AUR62003138 Chenopodium quinoa
AUR62007958 Chenopodium quinoa
AUR62008481 Chenopodium quinoa
AUR62021612 Chenopodium quinoa
BcaB03g12000 Brassica carinata
BcaB03g13119 Brassica carinata
BcaB03g14078 Brassica carinata
BcaB08g34347 Brassica carinata
BcaB08g34348 Brassica carinata
BcaC01g01751 Brassica carinata
BcaC05g26405 Brassica carinata
BcaC05g26406 Brassica carinata
BcaC06g35135 Brassica carinata
BcaC07g38711 Brassica carinata
BcaC07g41613 Brassica carinata
BolC3t19525H Brassica oleracea
BolC5t31176H Brassica oleracea
BolC6t39375H Brassica oleracea
BolC7t42466H Brassica oleracea
BolC8t49265H Brassica oleracea
BolC8t52166H Brassica oleracea
BraA07t29073Z Brassica rapa
BraA07t31154Z Brassica rapa
BraA08t34684Z Brassica rapa
BraA08t35140Z Brassica rapa
BraA09t41623Z Brassica rapa
C03p72300 Brassica napus
C05p24430 Brassica napus
C06p40560 Brassica napus
C07p19470 Brassica napus
C08p16410 Brassica napus
C08p46160 Brassica napus
CAN.G1340.15 Capsicum annuum
CAN.G206.191 Capsicum annuum
CAN.G442.8 Capsicum annuum
CAN.G479.42 Capsicum annuum
CAN.G587.18 Capsicum annuum
CANSAT50G0006 Cannabis sativa
CANSAT64G3017 Cannabis sativa
CARHR014310 Cardamine hirsuta
CARHR025350 Cardamine hirsuta
CARHR062240 Cardamine hirsuta
Carub.0001s1364 Capsella rubella
Carub.0001s2441 Capsella rubella
Carub.0002s1596 Capsella rubella
Ca_04904_v3 Cicer arietinum L.
Ca_21795_v3 Cicer arietinum L.
Ca_25949_v3 Cicer arietinum L.
Cc04_g13290 Coffea canephora
Cc07_g03790 Coffea canephora
Cc11_g12410 Coffea canephora
CDE04G1089 Ceratophyllum demersum
CDE04G1433 Ceratophyllum demersum
CDE06G2063 Ceratophyllum demersum
CDE07G1318 Ceratophyllum demersum
Cfa007616 Carpinus fangiana
Cfa008911 Carpinus fangiana
Cfa019289 Carpinus fangiana
Ciclev10010932m.g Citrus clementina
Ciclev10018667m.g Citrus clementina
Ciclev10030574m.g Citrus clementina
CiPaw.03G092200 Carya illinoinensis
CiPaw.04G059000 Carya illinoinensis
CiPaw.05G128200 Carya illinoinensis
CiPaw.06G089900 Carya illinoinensis
ClCG04G012020 Citrullus lanatus
ClCG05G023880 Citrullus lanatus
ClCG08G010250 Citrullus lanatus
COL.COLO4_06392 Corchorus olitorius
COL.COLO4_06859 Corchorus olitorius
COL.COLO4_12250 Corchorus olitorius
COL.COLO4_12251 Corchorus olitorius
COL.COLO4_27938 Corchorus olitorius
COL.COLO4_36447 Corchorus olitorius
COL.COLO4_38302 Corchorus olitorius
Cpa.g.c38931 Carica papaya
Cpa.g.sc1.82 Carica papaya
Cpa.g.sc1.83 Carica papaya
Cpa.g.sc13.308 Carica papaya
CsaV3_1G005760 Cucumis sativus L.
CsaV3_5G033140 Cucumis sativus L.
CsaV3_6G032450 Cucumis sativus L.
CSS0003937 Camellia sinensis var. sinensis
CSS0006220 Camellia sinensis var. sinensis
CSS0012767 Camellia sinensis var. sinensis
CSS0031318 Camellia sinensis var. sinensis
CSS0031748 Camellia sinensis var. sinensis
CSS0037922 Camellia sinensis var. sinensis
CSS0049375 Camellia sinensis var. sinensis
DCAR_007180 Daucus carota
DCAR_025403 Daucus carota
DCAR_026026 Daucus carota
DCAR_026027 Daucus carota
DCAR_030980 Daucus carota
Dinv10677 Davidia involucrata
Dinv11493 Davidia involucrata
Dinv16701 Davidia involucrata
Dinv16702 Davidia involucrata
Dinv16703 Davidia involucrata
Dinv33801 Davidia involucrata
Dinv34112 Davidia involucrata
Dinv38761 Davidia involucrata
Dinv38762 Davidia involucrata
Dinv38763 Davidia involucrata
Duzib068G0802 Durio zibethinus
Duzib147G0949 Durio zibethinus
Duzib205G0516 Durio zibethinus
Duzib248G0148 Durio zibethinus
Duzib251G0780 Durio zibethinus
Duzib264G1081 Durio zibethinus
Duzib268G0567 Durio zibethinus
ECA232G1758 Erigeron canadensis
ECA233G2264 Erigeron canadensis
ECA246G1273 Erigeron canadensis
EL10Ac5g11082 Beta vulgaris
EL10Ac5g12678 Beta vulgaris
EL10Ac6g14955 Beta vulgaris
Eucgr.B03182 Eucalyptus grandis
Eucgr.G02465 Eucalyptus grandis
FAN02G2125 Fragaria x ananassa
FAN05G3557 Fragaria x ananassa
FAN07G0538 Fragaria x ananassa
FAN08G1032 Fragaria x ananassa
FAN09G4103 Fragaria x ananassa
FAN12G2957 Fragaria x ananassa
FAN13G1067 Fragaria x ananassa
FAN14G2256 Fragaria x ananassa
FAN14G2903 Fragaria x ananassa
FAN14G4724 Fragaria x ananassa
FAN14G5065 Fragaria x ananassa
FAN17G0931 Fragaria x ananassa
FAN18G0277 Fragaria x ananassa
FAN22G0581 Fragaria x ananassa
FvH4_4g30520 Fragaria vesca
FvH4_5g14380 Fragaria vesca
FvH4_6g47740 Fragaria vesca
Glyma.01G054800 Glycine max
Glyma.02G113300 Glycine max
Glyma.04G165100 Glycine max
Glyma.06G198000 Glycine max
Glyma.07G227100 Glycine max
Glyma.20G027500 Glycine max
Gohir.A03G068500 Gossypium hirsutum
Gohir.A05G305900 Gossypium hirsutum
Gohir.A12G162600 Gossypium hirsutum
Gohir.A13G079800 Gossypium hirsutum
Gohir.D03G095100 Gossypium hirsutum
Gohir.D05G305900 Gossypium hirsutum
Gohir.D12G165600 Gossypium hirsutum
Gohir.D13G079500 Gossypium hirsutum
Gorai.003G099300 Gossypium raimondii
Gorai.008G178300 Gossypium raimondii
Gorai.009G325900 Gossypium raimondii
Gorai.013G090900 Gossypium raimondii
GSVIVG01007938001 Vitis vinifera
GSVIVG01011481001 Vitis vinifera
GSVIVG01012173001 Vitis vinifera
HanXRQChr07g0199511 Helianthus annuus
HanXRQChr08g0211011 Helianthus annuus
HanXRQChr09g0264111 Helianthus annuus
HanXRQChr12g0362751 Helianthus annuus
HanXRQChr14g0448641 Helianthus annuus
HanXRQChr15g0477041 Helianthus annuus
HanXRQChr17g0545441 Helianthus annuus
Haze_07670 Corylus avellana
Haze_11937 Corylus avellana
Haze_14477 Corylus avellana
Hma1.2p1_0060F.1_g033420 Hydrangea macrophylla
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla
Hma1.2p1_0357F.1_g134390 Hydrangea macrophylla
Hma1.2p1_2073F.1_g313230 Hydrangea macrophylla
HPP92_001620 Vanilla planifolia
HPP92_017528 Vanilla planifolia
Hund02615 Selenicereus undatus
Hund05858 Selenicereus undatus
Hund09843 Selenicereus undatus
Hund25198 Selenicereus undatus
Lalb_Chr05g0220121 Lupinus albus
Lalb_Chr07g0178221 Lupinus albus
Lalb_Chr09g0329111 Lupinus albus
Lalb_Chr10g0098571 Lupinus albus
Lalb_Chr13g0303011 Lupinus albus
Lalb_Chr17g0340961 Lupinus albus
Lj2g0017216 Lotus japonicus
Lj3C1032T12 Lonicera japonica
Lj4g0002221 Lotus japonicus
Lj4g0023409 Lotus japonicus
Lj6A782T115 Lonicera japonica
Lsat_1_v5_gn_2_88081 Lactuca sativa
Lsat_1_v5_gn_3_56361 Lactuca sativa
Lsat_1_v5_gn_4_170160 Lactuca sativa
Lsat_1_v5_gn_8_48060 Lactuca sativa
Manes.01G030700 Manihot esculenta
Manes.05G107500 Manihot esculenta
Manes.06G088300 Manihot esculenta
Manes.14G082800 Manihot esculenta
Mapoly0124s0050 Marchantia polymorpha
MBI19_g16681_MAGBIO Magnolia biondii
MD06G1199000 Malus domestica
MD09G1059300 Malus domestica
MD13G1066200 Malus domestica
MD14G1206400 Malus domestica
MD16G1065200 Malus domestica
MD17G1054900 Malus domestica
MD17G1055200 Malus domestica
Medtr4g082510 Medicago truncatula
Medtr4g109190 Medicago truncatula
Medtr5g043430 Medicago truncatula
MELO3C002006.2 Cucumis melo
MELO3C011433.2 Cucumis melo
MELO3C012134.2 Cucumis melo
Migut.E00063 Erythranthe guttata
Migut.H00664 Erythranthe guttata
Migut.L01226 Erythranthe guttata
MSTRG.13440 Avicennia marina
MSTRG.2324 Avicennia marina
MSTRG.23907 Avicennia marina
MSTRG.4447 Avicennia marina
MSTRG.727 Avicennia marina
MSTRG.7767 Avicennia marina
MSTRG.9614 Avicennia marina
Nitab4.5_0000014g0250 Nicotiana tabacum
Nitab4.5_0000334g0200 Nicotiana tabacum
Nitab4.5_0000520g0040 Nicotiana tabacum
Nitab4.5_0000565g0020 Nicotiana tabacum
Nitab4.5_0000720g0030 Nicotiana tabacum
Nitab4.5_0001211g0060 Nicotiana tabacum
Nitab4.5_0002756g0060 Nicotiana tabacum
Nitab4.5_0002832g0020 Nicotiana tabacum
Nitab4.5_0003021g0030 Nicotiana tabacum
Nitab4.5_0006673g0020 Nicotiana tabacum
Nitab4.5_0008573g0010 Nicotiana tabacum
Nn1g09175 Nelumbo nucifera
Nn3g17370 Nelumbo nucifera
Nn4g23320 Nelumbo nucifera
Nn5g27508 Nelumbo nucifera
Nn8g40395 Nelumbo nucifera
Oeu003341.1 Olea europaea
Oeu010233.1 Olea europaea
Oeu016231.1 Olea europaea
Oeu016756.1 Olea europaea
Oeu021094.1 Olea europaea
Oeu028260.1 Olea europaea
Oeu047264.1 Olea europaea
Oeu055092.1 Olea europaea
Oeu057649.1 Olea europaea
Os03g0758600 Oryza sativa ssp. japonica
Os12g0577800 Oryza sativa ssp. japonica
Peaxi162Scf00013g00051 Petunia axillaris
Peaxi162Scf00097g00712 Petunia axillaris
Peaxi162Scf00166g00945 Petunia axillaris
Peaxi162Scf00274g00008 Petunia axillaris
Peaxi162Scf00364g00128 Petunia axillaris
PGR004G1789 Punica granatum
PGR102G1162 Punica granatum
PGR119G0403 Punica granatum
PGSC0003DMG400002849 Solanum tuberosum
PGSC0003DMG400024659 Solanum tuberosum
PGSC0003DMG400033051 Solanum tuberosum
PGSC0003DMG401001346 Solanum tuberosum
PGSC0003DMG401028385 Solanum tuberosum
PGSC0003DMG402001346 Solanum tuberosum
PGSC0003DMG402028385 Solanum tuberosum
Phvul.002G069600 Phaseolus vulgaris
Phvul.002G167700 Phaseolus vulgaris
Phvul.009G184400 Phaseolus vulgaris
Potri.004G125900 Populus trichocarpa
Potri.008G092800 Populus trichocarpa
Potri.010G162000 Populus trichocarpa
Potri.017G088900 Populus trichocarpa
Prupe.1G281700 Prunus persica
Prupe.3G261200 Prunus persica
Prupe.5G199800 Prunus persica
Psat2g120520 Pisum sativum
Psat2g128440 Pisum sativum
Psat4g048920 Pisum sativum
Psat5g041560 Pisum sativum
Psat7g134840 Pisum sativum
PSO017G1876 Papaver somniferum
PSO017G3159 Papaver somniferum
PSO478G3214 Papaver somniferum
PSO478G3501 Papaver somniferum
QL03p070806 Quercus lobata
QL10p018539 Quercus lobata
RcHm_v2.0_Chr2g0166861 Rosa chinensis
RcHm_v2.0_Chr4g0438891 Rosa chinensis
RcHm_v2.0_Chr7g0182271 Rosa chinensis
RcHm_v2.0_Chr7g0182291 Rosa chinensis
Rhsim08G0149900 Rhododendron simsii
Rhsim10G0034500 Rhododendron simsii
Rhsim12G0077000 Rhododendron simsii
Rhsim12G0134000 Rhododendron simsii
Sabra04G0066600 Salix brachista
Sabra08G0069600 Salix brachista
Sabra10G0123100 Salix brachista
Sabra17G0078600 Salix brachista
SalBow2G1415 Salvia bowleyana
SalBow7G0805 Salvia bowleyana
SalBow8G2082 Salvia bowleyana
Sc04g0002960 Simmondsia chinensis
Sc04g0007760 Simmondsia chinensis
Sc11g0002250 Simmondsia chinensis
Sed0011907 Sechium edule
Sed0017185 Sechium edule
Sed0018687 Sechium edule
Sed0025408 Sechium edule
SEGI_03234 Sequoiadendron giganteum
SEGI_07957 Sequoiadendron giganteum
SEGI_10296 Sequoiadendron giganteum
SEGI_16187 Sequoiadendron giganteum
SEGI_22180 Sequoiadendron giganteum
SGA_v2.0_scaffold287G47150 Striga asiatica
SGA_v2.0_scaffold36G14432 Striga asiatica
SGA_v2.0_scaffold413G51167 Striga asiatica
SGA_v2.0_scaffold63G21635 Striga asiatica
SHI27316 Sapria himalayana
SMO358G0165 Selaginella moellendorffii
Solyc02g088480.3 Solanum lycopersicum
Solyc03g115590.4 Solanum lycopersicum
Solyc04g005500.3 Solanum lycopersicum
Solyc05g012640.3 Solanum lycopersicum
Solyc05g012650.4 Solanum lycopersicum
Solyc06g069630.4 Solanum lycopersicum
Sopen02g033190 Solanum pennellii
Sopen03g034580 Solanum pennellii
Sopen04g001520 Solanum pennellii
Sopen05g007470 Solanum pennellii
Sopen05g007480 Solanum pennellii
Sopen06g026930 Solanum pennellii
Sp1g12010 Schrenkiella parvula
Sp1g22180 Schrenkiella parvula
TAR371G0889 Trochodendron aralioides
TAR371G1209 Trochodendron aralioides
TAR374G1508 Trochodendron aralioides
TAR622G0794 Trochodendron aralioides
TAR629G1896 Trochodendron aralioides
THA.LOC104801814 Tarenaya hassleriana
THA.LOC104808598 Tarenaya hassleriana
THA.LOC104822024 Tarenaya hassleriana
THA.LOC104822901 Tarenaya hassleriana
Thecc.02G336800 Theobroma cacao
Thecc.03G095800 Theobroma cacao
Thecc.04G089400 Theobroma cacao
Thecc.07G038300 Theobroma cacao
Thhalv10006678m.g Eutrema salsugineum
Thhalv10006734m.g Eutrema salsugineum
Thhalv10018101m.g Eutrema salsugineum
TPR.G1992 Trifolium pratense
TPR.G22408 Trifolium pratense
TPR.G34059 Trifolium pratense
TWI31G0752 Tripterygium wilfordii
TWI32G0259 Tripterygium wilfordii
TWI60G0848 Tripterygium wilfordii
TWI75G0091 Tripterygium wilfordii
TWI79G1594 Tripterygium wilfordii
unitig_21.g20860 Utricularia gibba
unitig_22.g5554 Utricularia gibba
unitig_52.g17162 Utricularia gibba
unitig_52.g17163 Utricularia gibba
unitig_52.g17164 Utricularia gibba
unitig_62.g23693 Utricularia gibba
unitig_736.g22242 Utricularia gibba
unitig_899.g15161 Utricularia gibba
vmacro01333 Vaccinium macrocarpon
vmacro05592 Vaccinium macrocarpon
vmacro05671 Vaccinium macrocarpon
vmacro16367 Vaccinium macrocarpon
vmacro17582 Vaccinium macrocarpon
VMungo0251G0497 Vigna mungo
VMungo1215G2164 Vigna mungo
VMungo1309G1429 Vigna mungo
Zm00001eb029680 Zea mays
Zm00001eb057910 Zea mays
Zm00001eb080060 Zea mays
Zm00001eb214520 Zea mays
Zm00001eb410180 Zea mays

User provided reference genes

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