Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41730 Brassica napus
A06p28470 Brassica napus
Aa31LG11G1670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2550 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2551 Anthoceros agrestis
Actinidia18287 Actinidia chinensis
Actinidia25508 Actinidia chinensis
Ah.02g114520 Amaranthus hybridus
AL8G38580 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.05PZ0N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0KCS9I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0L3IFN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.22T31V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.26VLVT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4WU8X7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4Z06T4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5JWJ0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5UJZ6B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6KNN82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VD73D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CAI5H8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6JYTK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FA0H5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G83ENS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HKN5US Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IB48BU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDIH96 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ME8Z3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8KK0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAUB69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RL6XLT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SEE7W4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SM4CKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7DYAN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WR5QKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WSR2Q0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1W2M3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZV0AU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y24I4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YULU3C Arachis hypogaea
AT5G61820 Arabidopsis thaliana
ATR0582G142 Amborella trichopoda
ATR0582G262 Amborella trichopoda
ATR0582G326 Amborella trichopoda
ATR0582G349 Amborella trichopoda
Atru.chr6.1941 Acer truncatum
AUR62032204 Chenopodium quinoa
AUR62036973 Chenopodium quinoa
AUR62043381 Chenopodium quinoa
BcaB02g09604 Brassica carinata
BcaB07g29819 Brassica carinata
BcaC01g02434 Brassica carinata
BcaC01g02435 Brassica carinata
BcaC01g02436 Brassica carinata
BcaC01g02438 Brassica carinata
BcaC03g18098 Brassica carinata
BolC2t12223H Brassica oleracea
BolC3t18782H Brassica oleracea
BolC3t18788H Brassica oleracea
BolC3t18789H Brassica oleracea
BraA02t09113Z Brassica rapa
BraA06t25791Z Brassica rapa
C02p61650 Brassica napus
C03p65290 Brassica napus
C03p65330 Brassica napus
C03p65340 Brassica napus
CAN.G1089.12 Capsicum annuum
CAN.G1089.13 Capsicum annuum
CAN.G313.16 Capsicum annuum
CAN.G416.58 Capsicum annuum
CAN.G416.59 Capsicum annuum
CAN.G416.60 Capsicum annuum
CAN.G416.61 Capsicum annuum
CAN.G47.3 Capsicum annuum
CAN.G758.11 Capsicum annuum
CANSAT56G0376 Cannabis sativa
CANSAT56G1144 Cannabis sativa
CANSAT56G1598 Cannabis sativa
CARHR275580 Cardamine hirsuta
Carub.0008s2251 Capsella rubella
Carub.0008s2252 Capsella rubella
Ca_03348_v3 Cicer arietinum L.
Ca_04836_v3 Cicer arietinum L.
Ca_11099_v3 Cicer arietinum L.
Ca_12129_v3 Cicer arietinum L.
Ca_18289_v3 Cicer arietinum L.
Ca_20127_v3 Cicer arietinum L.
Ca_20204_v3 Cicer arietinum L.
Ca_23126_v3 Cicer arietinum L.
Ca_25256_v3 Cicer arietinum L.
Cc04_g05720 Coffea canephora
Cc04_g05730 Coffea canephora
Ciclev10031458m.g Citrus clementina
Ciclev10031461m.g Citrus clementina
CiPaw.01G033000 Carya illinoinensis
CiPaw.01G033200 Carya illinoinensis
CiPaw.01G033400 Carya illinoinensis
CiPaw.01G033600 Carya illinoinensis
ClCG02G007420 Citrullus lanatus
ClCG06G014570 Citrullus lanatus
COL.COLO4_37273 Corchorus olitorius
COL.COLO4_37275 Corchorus olitorius
Cpa.g.sc13.188 Carica papaya
CsaV3_1G004040 Cucumis sativus L.
CsaV3_1G004050 Cucumis sativus L.
CsaV3_1G004060 Cucumis sativus L.
CsaV3_7G007480 Cucumis sativus L.
CsaV3_7G007490 Cucumis sativus L.
CSS0010069 Camellia sinensis var. sinensis
CSS0013606 Camellia sinensis var. sinensis
DCAR_009629 Daucus carota
DCAR_009630 Daucus carota
DCAR_021392 Daucus carota
DCAR_021557 Daucus carota
Dinv13705 Davidia involucrata
Dinv13706 Davidia involucrata
Dinv23238 Davidia involucrata
Duzib068G0886 Durio zibethinus
Duzib084G0249 Durio zibethinus
Duzib084G1374 Durio zibethinus
ECA232G2039 Erigeron canadensis
ECA232G2628 Erigeron canadensis
ECA232G4705 Erigeron canadensis
EL10Ac5g11267 Beta vulgaris
Eucgr.K02186 Eucalyptus grandis
FAN04G1932 Fragaria x ananassa
FAN04G2911 Fragaria x ananassa
FAN08G1324 Fragaria x ananassa
FAN13G0164 Fragaria x ananassa
FAN13G0254 Fragaria x ananassa
FAN18G1321 Fragaria x ananassa
FvH4_5g09784 Fragaria vesca
FvH4_5g09790 Fragaria vesca
Glyma.01G121245 Glycine max
Glyma.01G121263 Glycine max
Glyma.01G121272 Glycine max
Glyma.03G057700 Glycine max
Glyma.03G071800 Glycine max
Glyma.03G071900 Glycine max
Glyma.03G075600 Glycine max
Glyma.03G078900 Glycine max
Glyma.03G115700 Glycine max
Glyma.04G118000 Glycine max
Glyma.04G118100 Glycine max
Glyma.04G118300 Glycine max
Glyma.04G118400 Glycine max
Glyma.04G143900 Glycine max
Glyma.04G144000 Glycine max
Glyma.04G144100 Glycine max
Glyma.04G144200 Glycine max
Glyma.05G126700 Glycine max
Glyma.05G126750 Glycine max
Glyma.05G126800 Glycine max
Glyma.05G126900 Glycine max
Glyma.05G127100 Glycine max
Glyma.08G081700 Glycine max
Glyma.08G081801 Glycine max
Glyma.09G025200 Glycine max
Glyma.15G131300 Glycine max
Glyma.15G131400 Glycine max
Glyma.U008700 Glycine max
Gohir.A07G046200 Gossypium hirsutum
Gohir.A12G194200 Gossypium hirsutum
Gohir.A12G194300 Gossypium hirsutum
Gohir.D07G050500 Gossypium hirsutum
Gohir.D12G196700 Gossypium hirsutum
Gohir.D12G196800 Gossypium hirsutum
Gorai.001G053600 Gossypium raimondii
Gorai.008G211300 Gossypium raimondii
Gorai.008G211400 Gossypium raimondii
GSVIVG01008668001 Vitis vinifera
HanXRQChr03g0061641 Helianthus annuus
HanXRQChr09g0273761 Helianthus annuus
HanXRQChr09g0273771 Helianthus annuus
HanXRQChr09g0274011 Helianthus annuus
HanXRQChr09g0274391 Helianthus annuus
HanXRQChr09g0274401 Helianthus annuus
Haze_15134 Corylus avellana
Hma1.2p1_0452F.1_g155860 Hydrangea macrophylla
Hma1.2p1_0452F.1_g155870 Hydrangea macrophylla
Hma1.2p1_1242F.1_g269910 Hydrangea macrophylla
Hma1.2p1_1242F.1_g269920 Hydrangea macrophylla
HPP92_000324 Vanilla planifolia
HPP92_025301 Vanilla planifolia
HPP92_025302 Vanilla planifolia
HPP92_025310 Vanilla planifolia
Hund10011 Selenicereus undatus
Hund10022 Selenicereus undatus
Lalb_Chr07g0185201 Lupinus albus
Lalb_Chr07g0188971 Lupinus albus
Lalb_Chr07g0188991 Lupinus albus
Lalb_Chr12g0203891 Lupinus albus
Lalb_Chr12g0203901 Lupinus albus
Lalb_Chr12g0208811 Lupinus albus
Lalb_Chr18g0058041 Lupinus albus
Lalb_Chr19g0126631 Lupinus albus
Lj1g0015663 Lotus japonicus
Lj3g0000025 Lotus japonicus
Lj3g0007615 Lotus japonicus
Lj3g0013305 Lotus japonicus
Lj3g0017932 Lotus japonicus
Lj3g0018933 Lotus japonicus
Lj3g0020835 Lotus japonicus
Lj4g0016919 Lotus japonicus
Lj4g0019194 Lotus japonicus
Lj5A85T114 Lonicera japonica
Lj5g0019809 Lotus japonicus
Lj5g0025155 Lotus japonicus
Lj6g0019617 Lotus japonicus
Lj9A488T62 Lonicera japonica
Lsat_1_v5_gn_4_84201 Lactuca sativa
Lsat_1_v5_gn_4_84241 Lactuca sativa
Lsat_1_v5_gn_4_84261 Lactuca sativa
Manes.06G127700 Manihot esculenta
Mapoly0002s0344 Marchantia polymorpha
Mapoly0002s0345 Marchantia polymorpha
Mapoly0002s0346 Marchantia polymorpha
Mapoly0005s0246 Marchantia polymorpha
Mapoly0066s0047 Marchantia polymorpha
MBI07_g13948_MAGBIO Magnolia biondii
MBI07_g13949_MAGBIO Magnolia biondii
MBI07_g13950_MAGBIO Magnolia biondii
MBI07_g13951_MAGBIO Magnolia biondii
MBI07_g13952_MAGBIO Magnolia biondii
MBI07_g13954_MAGBIO Magnolia biondii
MCO14G204 Micromonas commoda
MD00G1075600 Malus domestica
MD00G1075700 Malus domestica
MD00G1129500 Malus domestica
MD14G1145300 Malus domestica
MD14G1145500 Malus domestica
MD14G1145600 Malus domestica
Medtr0083s0100 Medicago truncatula
Medtr1g035220 Medicago truncatula
Medtr1g052640 Medicago truncatula
Medtr1g062750 Medicago truncatula
Medtr2g030460 Medicago truncatula
Medtr2g030470 Medicago truncatula
Medtr2g030480 Medicago truncatula
Medtr3g010150 Medicago truncatula
Medtr3g010160 Medicago truncatula
Medtr3g035040 Medicago truncatula
Medtr4g094548 Medicago truncatula
Medtr4g094550 Medicago truncatula
Medtr4g094555 Medicago truncatula
Medtr4g094560 Medicago truncatula
Medtr4g094562 Medicago truncatula
Medtr4g094565 Medicago truncatula
Medtr4g094570 Medicago truncatula
Medtr6g048310 Medicago truncatula
Medtr6g048350 Medicago truncatula
Medtr6g089930 Medicago truncatula
Medtr6g090090 Medicago truncatula
Medtr8g039300 Medicago truncatula
MELO3C017327.2 Cucumis melo
MELO3C017328.2 Cucumis melo
MELO3C017329.2 Cucumis melo
MELO3C017331.2 Cucumis melo
MELO3C017332.2 Cucumis melo
MELO3C018553.2 Cucumis melo
Migut.D01172 Erythranthe guttata
Migut.I00660 Erythranthe guttata
MSTRG.11203 Avicennia marina
MSTRG.9378 Avicennia marina
Nitab4.5_0001614g0010 Nicotiana tabacum
Nitab4.5_0002540g0040 Nicotiana tabacum
Nitab4.5_0003278g0020 Nicotiana tabacum
Nitab4.5_0007345g0030 Nicotiana tabacum
Nitab4.5_0008229g0010 Nicotiana tabacum
Nitab4.5_0014513g0030 Nicotiana tabacum
Nn1g02121 Nelumbo nucifera
Oeu046598.1 Olea europaea
Oeu051181.1 Olea europaea
Os08g0538600 Oryza sativa ssp. japonica
Peaxi162Scf00207g00232 Petunia axillaris
Peaxi162Scf00628g00076 Petunia axillaris
Peaxi162Scf00835g00326 Petunia axillaris
PGR102G1961 Punica granatum
PGR102G2003 Punica granatum
PGSC0003DMG400014468 Solanum tuberosum
PGSC0003DMG400014470 Solanum tuberosum
PGSC0003DMG400020037 Solanum tuberosum
Phvul.002G197800 Phaseolus vulgaris
Phvul.006G127300 Phaseolus vulgaris
Phvul.006G127400 Phaseolus vulgaris
Phvul.009G165400 Phaseolus vulgaris
Phvul.010G000800 Phaseolus vulgaris
Phvul.010G017500 Phaseolus vulgaris
Phvul.010G017800 Phaseolus vulgaris
Phvul.010G017900 Phaseolus vulgaris
Phvul.010G018100 Phaseolus vulgaris
Phvul.010G022300 Phaseolus vulgaris
Phvul.010G022500 Phaseolus vulgaris
Phvul.010G035300 Phaseolus vulgaris
Phvul.010G035400 Phaseolus vulgaris
Phvul.010G035700 Phaseolus vulgaris
Phvul.011G142100 Phaseolus vulgaris
Potri.012G110300 Populus trichocarpa
Potri.012G110600 Populus trichocarpa
Potri.015G108500 Populus trichocarpa
Potri.015G108600 Populus trichocarpa
Potri.015G108700 Populus trichocarpa
Potri.015G108800 Populus trichocarpa
Pp3c10_17760 Physcomitrium patens
Pp3c19_20840 Physcomitrium patens
Pp3c6_7090 Physcomitrium patens
Prupe.5G139900 Prunus persica
Psat1g166880 Pisum sativum
Psat7g092640 Pisum sativum
PSO170G0793 Papaver somniferum
PSO455G0186 Papaver somniferum
PSO675G1950 Papaver somniferum
PSO732G0166 Papaver somniferum
QL10p000231 Quercus lobata
QL10p000238 Quercus lobata
QL10p000256 Quercus lobata
QL10p000264 Quercus lobata
RcHm_v2.0_Chr1g0356321 Rosa chinensis
RcHm_v2.0_Chr1g0356331 Rosa chinensis
RcHm_v2.0_Chr4g0410211 Rosa chinensis
RcHm_v2.0_Chr7g0188461 Rosa chinensis
RcHm_v2.0_Chr7g0188471 Rosa chinensis
Rhsim08G0199200 Rhododendron simsii
Rhsim08G0199300 Rhododendron simsii
Rhsim08G0199400 Rhododendron simsii
Sabra03G0066100 Salix brachista
Sabra12G0080300 Salix brachista
Sabra12G0080400 Salix brachista
Sabra15G0128700 Salix brachista
Sabra15G0128800 Salix brachista
Sabra15G0128900 Salix brachista
Sabra15G0131000 Salix brachista
Sabra15G0131100 Salix brachista
SalBow1G3989 Salvia bowleyana
SalBow7G2038 Salvia bowleyana
Sc20g0007430 Simmondsia chinensis
Sc20g0007450 Simmondsia chinensis
Sed0006436 Sechium edule
Sed0010042 Sechium edule
Sed0020427 Sechium edule
Sed0023120 Sechium edule
SEGI_10022 Sequoiadendron giganteum
SEGI_18198 Sequoiadendron giganteum
SEGI_20435 Sequoiadendron giganteum
SEGI_21186 Sequoiadendron giganteum
SEGI_28934 Sequoiadendron giganteum
SEGI_36732 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14668 Striga asiatica
SMO230G0101 Selaginella moellendorffii
SMO367G0006 Selaginella moellendorffii
SMO367G0266 Selaginella moellendorffii
SMO367G0341 Selaginella moellendorffii
SMO367G0697 Selaginella moellendorffii
Solyc06g068730.1 Solanum lycopersicum
Solyc12g042380.2 Solanum lycopersicum
Sopen06g026010 Solanum pennellii
Sopen12g021330 Solanum pennellii
Sp2g25020 Schrenkiella parvula
TAR371G0624 Trochodendron aralioides
THA.LOC104818287 Tarenaya hassleriana
Thecc.03G142200 Theobroma cacao
Thhalv10004123m.g Eutrema salsugineum
Thhalv10004141m.g Eutrema salsugineum
TPR.G10843 Trifolium pratense
TPR.G11062 Trifolium pratense
TPR.G11371 Trifolium pratense
TPR.G11459 Trifolium pratense
TPR.G19656 Trifolium pratense
TPR.G20481 Trifolium pratense
TPR.G20841 Trifolium pratense
TPR.G22924 Trifolium pratense
TPR.G22925 Trifolium pratense
TPR.G26351 Trifolium pratense
TPR.G26353 Trifolium pratense
TPR.G28448 Trifolium pratense
TPR.G28450 Trifolium pratense
TPR.G28747 Trifolium pratense
TPR.G29095 Trifolium pratense
TPR.G29101 Trifolium pratense
TPR.G29638 Trifolium pratense
TPR.G29925 Trifolium pratense
TPR.G30373 Trifolium pratense
TPR.G30382 Trifolium pratense
TPR.G30384 Trifolium pratense
TPR.G30385 Trifolium pratense
TPR.G31363 Trifolium pratense
TPR.G31413 Trifolium pratense
TPR.G35052 Trifolium pratense
TPR.G359 Trifolium pratense
TPR.G36540 Trifolium pratense
TPR.G36584 Trifolium pratense
TPR.G39265 Trifolium pratense
TPR.G39324 Trifolium pratense
TPR.G40862 Trifolium pratense
TPR.G4433 Trifolium pratense
TPR.G4450 Trifolium pratense
TPR.G7380 Trifolium pratense
TPR.G9392 Trifolium pratense
TPR.G9413 Trifolium pratense
TWI23G0045 Tripterygium wilfordii
TWI23G0407 Tripterygium wilfordii
TWI39G0322 Tripterygium wilfordii
TWI39G1180 Tripterygium wilfordii
TWI39G1248 Tripterygium wilfordii
unitig_899.g14823 Utricularia gibba
vmacro19106 Vaccinium macrocarpon
vmacro19107 Vaccinium macrocarpon
vmacro19108 Vaccinium macrocarpon
VMungo0251G0218 Vigna mungo
VMungo0331G0150 Vigna mungo
VMungo0331G0413 Vigna mungo
VMungo0331G1170 Vigna mungo
VMungo0331G1188 Vigna mungo
VMungo0331G1555 Vigna mungo
VMungo0331G1815 Vigna mungo
VMungo0540G1304 Vigna mungo
VMungo0540G1993 Vigna mungo
VMungo0720G2767 Vigna mungo
Zm00001eb037110 Zea mays

User provided reference genes

Program Settings