Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15000 Brassica napus
A02p26330 Brassica napus
A03p45410 Brassica napus
A03p54660 Brassica napus
A08p21970 Brassica napus
A09p14140 Brassica napus
A09p27970 Brassica napus
Aa31LG6G6910 Aethionema arabicum
Aa31LG6G6920 Aethionema arabicum
Ah.12g052140 Amaranthus hybridus
AL2G10860 Arabidopsis lyrata
AL6G45380 Arabidopsis lyrata
AL6G45390 Arabidopsis lyrata
AL7G29670 Arabidopsis lyrata
Aqoxy1G02035 Aquilegia oxysepala
Aqoxy3G03258 Aquilegia oxysepala
Aqoxy5G04038 Aquilegia oxysepala
Aqoxy5G04039 Aquilegia oxysepala
Aqoxy5G04040 Aquilegia oxysepala
Aqoxy5G04042 Aquilegia oxysepala
Aqoxy7G00128 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VSRR5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZFC6QQ Arachis hypogaea
AT1G64160 Arabidopsis thaliana
AT4G11180 Arabidopsis thaliana
AT4G11190 Arabidopsis thaliana
AT4G11210 Arabidopsis thaliana
AT4G23690 Arabidopsis thaliana
ATR0697G101 Amborella trichopoda
ATR0697G105 Amborella trichopoda
Atru.chr9.2078 Acer truncatum
Atru.chr9.2102 Acer truncatum
Atru.chr9.2103 Acer truncatum
AUR62010779 Chenopodium quinoa
AUR62019778 Chenopodium quinoa
BcaB01g01617 Brassica carinata
BcaB01g02707 Brassica carinata
BcaB03g12404 Brassica carinata
BcaB05g23854 Brassica carinata
BcaB07g31524 Brassica carinata
BcaB08g34588 Brassica carinata
BcaC01g00484 Brassica carinata
BcaC01g03068 Brassica carinata
BcaC04g21115 Brassica carinata
BcaC04g22651 Brassica carinata
BcaC04g22652 Brassica carinata
BcaC09g50954 Brassica carinata
BcaNung01078 Brassica carinata
BcaNung03182 Brassica carinata
BcaNung03437 Brassica carinata
BolC1t01814H Brassica oleracea
BolC2t10217H Brassica oleracea
BolC3t17926H Brassica oleracea
BolC3t20292H Brassica oleracea
BolC7t45798H Brassica oleracea
BolC9t54602H Brassica oleracea
BolC9t56383H Brassica oleracea
BraA01t01440Z Brassica rapa
BraA02t07634Z Brassica rapa
BraA03t13673Z Brassica rapa
BraA03t14533Z Brassica rapa
BraA08t34151Z Brassica rapa
BraA09t37062Z Brassica rapa
BraA09t38366Z Brassica rapa
C01p18880 Brassica napus
C03p56360 Brassica napus
C03p80430 Brassica napus
C07p53000 Brassica napus
C09p17050 Brassica napus
C09p35460 Brassica napus
CAN.G532.64 Capsicum annuum
CAN.G532.65 Capsicum annuum
CAN.G532.66 Capsicum annuum
CANSAT21G0282 Cannabis sativa
CANSAT21G1649 Cannabis sativa
CANSAT21G1891 Cannabis sativa
CANSAT21G2306 Cannabis sativa
CARHR046780 Cardamine hirsuta
CARHR231080 Cardamine hirsuta
CARHR255370 Cardamine hirsuta
CARHR255380 Cardamine hirsuta
CARHR255390 Cardamine hirsuta
Carub.0002s0064 Capsella rubella
Carub.0006s3003 Capsella rubella
Carub.0006s3004 Capsella rubella
Carub.0007s1743 Capsella rubella
Ca_10965_v3 Cicer arietinum L.
Cc02_g35960 Coffea canephora
Cc07_g19920 Coffea canephora
Cc08_g06720 Coffea canephora
Cc08_g15540 Coffea canephora
Cc10_g10790 Coffea canephora
Cc10_g10800 Coffea canephora
Cfa012269 Carpinus fangiana
Cfa012270 Carpinus fangiana
Cfa012272 Carpinus fangiana
Cfa012274 Carpinus fangiana
Ciclev10022439m.g Citrus clementina
Ciclev10023550m.g Citrus clementina
Ciclev10023858m.g Citrus clementina
CiPaw.11G126600 Carya illinoinensis
CiPaw.11G126700 Carya illinoinensis
CiPaw.12G087000 Carya illinoinensis
ClCG07G007630 Citrullus lanatus
ClCG07G007650 Citrullus lanatus
ClCG07G007710 Citrullus lanatus
COL.COLO4_08331 Corchorus olitorius
COL.COLO4_08332 Corchorus olitorius
COL.COLO4_21756 Corchorus olitorius
COL.COLO4_21757 Corchorus olitorius
COL.COLO4_21759 Corchorus olitorius
COL.COLO4_21760 Corchorus olitorius
Cpa.g.sc321.4 Carica papaya
CsaV3_4G006220 Cucumis sativus L.
CsaV3_4G006240 Cucumis sativus L.
CsaV3_4G006250 Cucumis sativus L.
CSS0004240 Camellia sinensis var. sinensis
CSS0018205 Camellia sinensis var. sinensis
CSS0020889 Camellia sinensis var. sinensis
CSS0024173 Camellia sinensis var. sinensis
CSS0033203 Camellia sinensis var. sinensis
CSS0037626 Camellia sinensis var. sinensis
CSS0039034 Camellia sinensis var. sinensis
CSS0046546 Camellia sinensis var. sinensis
DCAR_006854 Daucus carota
DCAR_027747 Daucus carota
DCAR_027748 Daucus carota
Dinv37568 Davidia involucrata
Dinv37569 Davidia involucrata
Dinv38882 Davidia involucrata
Dinv38883 Davidia involucrata
Duzib068G1372 Durio zibethinus
Duzib205G0342 Durio zibethinus
Duzib205G1475 Durio zibethinus
EL10Ac7g16500 Beta vulgaris
Eucgr.D00276 Eucalyptus grandis
Eucgr.D01787 Eucalyptus grandis
Eucgr.D01788 Eucalyptus grandis
Eucgr.D01789 Eucalyptus grandis
Eucgr.D01790 Eucalyptus grandis
Eucgr.E00809 Eucalyptus grandis
Eucgr.E00810 Eucalyptus grandis
Eucgr.E00812 Eucalyptus grandis
Eucgr.E00813 Eucalyptus grandis
Eucgr.E00814 Eucalyptus grandis
Eucgr.E00815 Eucalyptus grandis
Eucgr.E00817 Eucalyptus grandis
Eucgr.L01975 Eucalyptus grandis
Eucgr.L01976 Eucalyptus grandis
FAN04G0165 Fragaria x ananassa
FAN04G1541 Fragaria x ananassa
FAN04G1788 Fragaria x ananassa
FAN04G2524 Fragaria x ananassa
FAN08G1732 Fragaria x ananassa
FAN08G1913 Fragaria x ananassa
FAN08G2505 Fragaria x ananassa
FAN08G3175 Fragaria x ananassa
FAN08G3384 Fragaria x ananassa
FAN13G0477 Fragaria x ananassa
FAN13G1295 Fragaria x ananassa
FAN13G1616 Fragaria x ananassa
FAN13G2219 Fragaria x ananassa
FAN13G2370 Fragaria x ananassa
FAN13G3277 Fragaria x ananassa
FAN13G3295 Fragaria x ananassa
FAN18G2213 Fragaria x ananassa
FAN18G2429 Fragaria x ananassa
FAN18G3084 Fragaria x ananassa
FAN18G4483 Fragaria x ananassa
FvH4_5g03690 Fragaria vesca
FvH4_5g03700 Fragaria vesca
FvH4_5g03710 Fragaria vesca
FvH4_5g03711 Fragaria vesca
FvH4_5g03720 Fragaria vesca
FvH4_5g21200 Fragaria vesca
Glyma.05G213400 Glycine max
Glyma.08G019900 Glycine max
Glyma.08G020000 Glycine max
Gohir.A02G103500 Gossypium hirsutum
Gohir.A02G103600 Gossypium hirsutum
Gohir.A08G103300 Gossypium hirsutum
Gohir.A12G232400 Gossypium hirsutum
Gohir.D03G080400 Gossypium hirsutum
Gohir.D03G080500 Gossypium hirsutum
Gohir.D08G133500 Gossypium hirsutum
Gohir.D12G235000 Gossypium hirsutum
Gorai.003G083500 Gossypium raimondii
Gorai.003G083600 Gossypium raimondii
Gorai.004G136600 Gossypium raimondii
GSVIVG01019450001 Vitis vinifera
HanXRQChr01g0016881 Helianthus annuus
HanXRQChr17g0535591 Helianthus annuus
Haze_08708 Corylus avellana
Haze_08712 Corylus avellana
Haze_08713 Corylus avellana
Haze_08714 Corylus avellana
Haze_08715 Corylus avellana
Haze_08716 Corylus avellana
Hma1.2p1_2511F.1_g323610 Hydrangea macrophylla
Hma1.2p1_2511F.1_g323620 Hydrangea macrophylla
Hma1.2p1_2511F.1_g323640 Hydrangea macrophylla
Hma1.2p1_2783F.1_g328390 Hydrangea macrophylla
Hma1.2p1_2783F.1_g328415 Hydrangea macrophylla
Hma1.2p1_2783F.1_g328420 Hydrangea macrophylla
HPP92_005508 Vanilla planifolia
HPP92_024390 Vanilla planifolia
Lalb_Chr09g0332751 Lupinus albus
Lalb_Chr16g0390351 Lupinus albus
Lalb_Chr16g0390371 Lupinus albus
Lj1C1154T4 Lonicera japonica
Lj1C1154T5 Lonicera japonica
Lj2C174G14 Lonicera japonica
Lj2C174T17 Lonicera japonica
Lj4g0015822 Lotus japonicus
Lj4g0019496 Lotus japonicus
Lj4g0021387 Lotus japonicus
Lj4g0025675 Lotus japonicus
Lj8C214G5 Lonicera japonica
Lj8C214T4 Lonicera japonica
Lj8C214T5 Lonicera japonica
Lj8P214T56 Lonicera japonica
LjContig00001g0003448 Lotus japonicus
LjContig00001g0021347 Lotus japonicus
LjContig00001g0025073 Lotus japonicus
LjContig00001g0027989 Lotus japonicus
Lsat_1_v5_gn_3_9520 Lactuca sativa
Lsat_1_v5_gn_3_9560 Lactuca sativa
Lsat_1_v5_gn_3_9760 Lactuca sativa
Lsat_1_v5_gn_6_84640 Lactuca sativa
Lsat_1_v5_gn_6_84660 Lactuca sativa
Manes.01G050700 Manihot esculenta
Manes.02G014366 Manihot esculenta
Manes.02G014432 Manihot esculenta
Manes.02G014500 Manihot esculenta
Manes.02G014550 Manihot esculenta
Manes.02G014600 Manihot esculenta
Mapoly0070s0018 Marchantia polymorpha
MBI07_g06321_MAGBIO Magnolia biondii
MD06G1096500 Malus domestica
MD06G1096600 Malus domestica
MD14G1116600 Malus domestica
MD14G1116800 Malus domestica
MD14G1116900 Malus domestica
MD14G1117000 Malus domestica
Medtr1051s0010 Medicago truncatula
Medtr8g064660 Medicago truncatula
Medtr8g099115 Medicago truncatula
Medtr8g099135 Medicago truncatula
MELO3C016325.2 Cucumis melo
MELO3C016328.2 Cucumis melo
Migut.A00696 Erythranthe guttata
Migut.E01222 Erythranthe guttata
MSTRG.25647 Avicennia marina
Nitab4.5_0006998g0010 Nicotiana tabacum
Nitab4.5_0006998g0040 Nicotiana tabacum
Nitab4.5_0006998g0050 Nicotiana tabacum
Nitab4.5_0006998g0060 Nicotiana tabacum
Nitab4.5_0011409g0020 Nicotiana tabacum
Nitab4.5_0011409g0030 Nicotiana tabacum
Nitab4.5_0011409g0040 Nicotiana tabacum
Nn1g01758 Nelumbo nucifera
Nn1g01759 Nelumbo nucifera
Nn3g20979 Nelumbo nucifera
Nn7g37334 Nelumbo nucifera
Oeu008838.1 Olea europaea
Oeu008840.1 Olea europaea
Oeu008841.1 Olea europaea
Oeu011807.1 Olea europaea
Oeu029521.1 Olea europaea
Oeu063044.1 Olea europaea
Oeu063046.1 Olea europaea
Oeu063047.1 Olea europaea
Os07g0636800 Oryza sativa ssp. japonica
Os07g0637700 Oryza sativa ssp. japonica
Os07g0638500 Oryza sativa ssp. japonica
Os07g0643800 Oryza sativa ssp. japonica
Peaxi162Scf00074g01513 Petunia axillaris
Peaxi162Scf00074g01524 Petunia axillaris
Peaxi162Scf00074g10153 Petunia axillaris
Peaxi162Scf00527g00056 Petunia axillaris
PGR031G0578 Punica granatum
PGR031G0762 Punica granatum
PGR031G2656 Punica granatum
PGR031G2667 Punica granatum
PGR031G2953 Punica granatum
PGR031G3374 Punica granatum
PGR042G0377 Punica granatum
PGR042G0870 Punica granatum
PGSC0003DMG400012170 Solanum tuberosum
Phvul.002G294800 Phaseolus vulgaris
Phvul.002G294900 Phaseolus vulgaris
Phvul.003G252100 Phaseolus vulgaris
Potri.001G096440 Populus trichocarpa
Potri.001G096560 Populus trichocarpa
Potri.001G096680 Populus trichocarpa
Potri.001G096800 Populus trichocarpa
Potri.001G097001 Populus trichocarpa
Potri.003G134400 Populus trichocarpa
Potri.003G134600 Populus trichocarpa
Potri.003G134800 Populus trichocarpa
Potri.013G142401 Populus trichocarpa
Potri.013G142501 Populus trichocarpa
Potri.013G142602 Populus trichocarpa
Potri.013G142702 Populus trichocarpa
Prupe.5G111000 Prunus persica
Prupe.5G111100 Prunus persica
Prupe.5G111300 Prunus persica
Prupe.5G111400 Prunus persica
Prupe.5G111500 Prunus persica
Psat7g028120 Pisum sativum
Psat7g028560 Pisum sativum
Psat7g028600 Pisum sativum
Psat7g029960 Pisum sativum
PSO081G0011 Papaver somniferum
PSO081G0025 Papaver somniferum
PSO081G0027 Papaver somniferum
PSO081G0033 Papaver somniferum
PSO081G0048 Papaver somniferum
PSO081G0050 Papaver somniferum
PSO081G0052 Papaver somniferum
PSO081G0053 Papaver somniferum
PSO081G0073 Papaver somniferum
PSO081G0076 Papaver somniferum
PSO081G0131 Papaver somniferum
PSO081G0140 Papaver somniferum
PSO081G0141 Papaver somniferum
PSO081G0166 Papaver somniferum
PSO081G0172 Papaver somniferum
PSO210G7529 Papaver somniferum
PSO541G4063 Papaver somniferum
QL02p032353 Quercus lobata
QL02p032379 Quercus lobata
QL02p032441 Quercus lobata
QL02p032479 Quercus lobata
QL02p032510 Quercus lobata
QL93p0279_0013 Quercus lobata
RcHm_v2.0_Chr3g0480301 Rosa chinensis
RcHm_v2.0_Chr7g0195991 Rosa chinensis
RcHm_v2.0_Chr7g0196001 Rosa chinensis
RcHm_v2.0_Chr7g0196011 Rosa chinensis
RcHm_v2.0_Chr7g0196031 Rosa chinensis
RcHm_v2.0_Chr7g0196041 Rosa chinensis
Rhsim07G0085800 Rhododendron simsii
Rhsim07G0085900 Rhododendron simsii
Rhsim07G0086000 Rhododendron simsii
Sabra01G0072400 Salix brachista
Sabra03G0096800 Salix brachista
Sabra03G0096900 Salix brachista
Sabra03G0097000 Salix brachista
SalBow1G0526 Salvia bowleyana
SalBow1G2735 Salvia bowleyana
SalBow1G4033 Salvia bowleyana
SalBow1G6296 Salvia bowleyana
SalBow1G8646 Salvia bowleyana
Sc06g0007380 Simmondsia chinensis
Sc06g0007390 Simmondsia chinensis
Sed0008594 Sechium edule
Sed0018666 Sechium edule
SEGI_01725 Sequoiadendron giganteum
SEGI_06715 Sequoiadendron giganteum
SEGI_08156 Sequoiadendron giganteum
SEGI_12808 Sequoiadendron giganteum
SEGI_17052 Sequoiadendron giganteum
SEGI_29199 Sequoiadendron giganteum
SEGI_29621 Sequoiadendron giganteum
SEGI_34014 Sequoiadendron giganteum
SEGI_35461 Sequoiadendron giganteum
SEGI_37593 Sequoiadendron giganteum
SEGI_40835 Sequoiadendron giganteum
SGA_v2.0_scaffold96G28996 Striga asiatica
SMO111G0080 Selaginella moellendorffii
SMO198G0042 Selaginella moellendorffii
SMO239G0163 Selaginella moellendorffii
Solyc08g081780.1 Solanum lycopersicum
Solyc08g081790.3 Solanum lycopersicum
Solyc08g081800.1 Solanum lycopersicum
Sopen08g030080 Solanum pennellii
Sopen08g030090 Solanum pennellii
Sp2g00560 Schrenkiella parvula
Sp7g21620 Schrenkiella parvula
TAR374G1732 Trochodendron aralioides
TAR375G0066 Trochodendron aralioides
TAR375G0523 Trochodendron aralioides
TAR629G0636 Trochodendron aralioides
TAR629G0943 Trochodendron aralioides
TAR629G1007 Trochodendron aralioides
TAR629G1320 Trochodendron aralioides
TAR629G1469 Trochodendron aralioides
TAR629G2532 Trochodendron aralioides
TAR629G2632 Trochodendron aralioides
TAR629G3500 Trochodendron aralioides
THA.LOC104809352 Tarenaya hassleriana
THA.LOC104814831 Tarenaya hassleriana
Thecc.03G289500 Theobroma cacao
Thecc.03G289600 Theobroma cacao
Thecc.03G289700 Theobroma cacao
Thecc.03G289800 Theobroma cacao
Thecc.03G290000 Theobroma cacao
Thhalv10024130m.g Eutrema salsugineum
Thhalv10026947m.g Eutrema salsugineum
Thhalv10028996m.g Eutrema salsugineum
Thhalv10028997m.g Eutrema salsugineum
TPR.G3396 Trifolium pratense
TPR.G3431 Trifolium pratense
TPR.G3454 Trifolium pratense
TWI15G0614 Tripterygium wilfordii
TWI15G0897 Tripterygium wilfordii
TWI81G0235 Tripterygium wilfordii
TWI81G0957 Tripterygium wilfordii
unitig_747.g21733 Utricularia gibba
unitig_88.g27630 Utricularia gibba
vmacro11420 Vaccinium macrocarpon
vmacro13993 Vaccinium macrocarpon
vmacro13994 Vaccinium macrocarpon
vmacro13995 Vaccinium macrocarpon
vmacro13996 Vaccinium macrocarpon
VMungo0251G1121 Vigna mungo
VMungo0251G2616 Vigna mungo
VMungo0251G3016 Vigna mungo
Zm00001eb328700 Zea mays

User provided reference genes

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