Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21410 Brassica napus
A03p39990 Brassica napus
A03p49620 Brassica napus
A05p32500 Brassica napus
A05p32530 Brassica napus
A06p04750 Brassica napus
Aa31LG10G5680 Aethionema arabicum
Aa31LG10G5970 Aethionema arabicum
Aa31LG8G4010 Aethionema arabicum
Aa31LG8G4200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3096 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3098 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.31 Anthoceros agrestis
Actinidia02267 Actinidia chinensis
Actinidia02514 Actinidia chinensis
Actinidia07519 Actinidia chinensis
Actinidia14242 Actinidia chinensis
Actinidia18485 Actinidia chinensis
Actinidia21516 Actinidia chinensis
Actinidia28297 Actinidia chinensis
Actinidia35526 Actinidia chinensis
Actinidia40359 Actinidia chinensis
Ah.07g203830 Amaranthus hybridus
Ah.07g203870 Amaranthus hybridus
AL3G29930 Arabidopsis lyrata
AL3G30280 Arabidopsis lyrata
AL7G38960 Arabidopsis lyrata
Aqoxy144s007 Aquilegia oxysepala
Aqoxy2G02579 Aquilegia oxysepala
Aqoxy6G02054 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4YDI7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GR1JV3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H753U7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJPB47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UP4XN2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7XT05 Arachis hypogaea
AT1G48030 Arabidopsis thaliana
AT3G16950 Arabidopsis thaliana
AT3G17240 Arabidopsis thaliana
AT4G16155 Arabidopsis thaliana
ATR0585G044 Amborella trichopoda
ATR0693G309 Amborella trichopoda
ATR0749G054 Amborella trichopoda
Atru.chr4.2982 Acer truncatum
Atru.chr4.3081 Acer truncatum
AUR62002588 Chenopodium quinoa
AUR62016133 Chenopodium quinoa
AUR62030011 Chenopodium quinoa
AUR62041407 Chenopodium quinoa
AUR62044578 Chenopodium quinoa
BcaB04g18914 Brassica carinata
BcaB04g18915 Brassica carinata
BcaB04g18917 Brassica carinata
BcaB06g25787 Brassica carinata
BcaB06g25815 Brassica carinata
BcaB07g33795 Brassica carinata
BcaC01g03798 Brassica carinata
BcaC05g28809 Brassica carinata
BcaC06g32991 Brassica carinata
BcaC06g33461 Brassica carinata
BcaC08g43003 Brassica carinata
BcaC09g50312 Brassica carinata
BcaNung00219 Brassica carinata
BolC1t02616H Brassica oleracea
BolC3t17130H Brassica oleracea
BolC5t33655H Brassica oleracea
BolC5t33658H Brassica oleracea
BolC6t35371H Brassica oleracea
BolC7t45294H Brassica oleracea
BraA01t02046Z Brassica rapa
BraA03t13147Z Brassica rapa
BraA03t14061Z Brassica rapa
BraA05t22076Z Brassica rapa
BraA05t22079Z Brassica rapa
BraA06t23678Z Brassica rapa
C01p26750 Brassica napus
C03p48520 Brassica napus
C05p49120 Brassica napus
C05p49170 Brassica napus
C06p02440 Brassica napus
C07p47690 Brassica napus
CAN.G1392.1 Capsicum annuum
CAN.G1392.3 Capsicum annuum
CAN.G14.20 Capsicum annuum
CAN.G1715.13 Capsicum annuum
CAN.G305.51 Capsicum annuum
CAN.G484.112 Capsicum annuum
CAN.G484.79 Capsicum annuum
CANSAT78G0220 Cannabis sativa
CANSAT78G1107 Cannabis sativa
CANSAT78G2215 Cannabis sativa
CARHR037670 Cardamine hirsuta
CARHR092220 Cardamine hirsuta
CARHR092510 Cardamine hirsuta
CARHR222520 Cardamine hirsuta
Carub.0001s3714 Capsella rubella
Carub.0003s1670 Capsella rubella
Carub.0003s1699 Capsella rubella
Carub.0007s2540 Capsella rubella
Ca_14108_v3 Cicer arietinum L.
Ca_21400_v3 Cicer arietinum L.
Ca_21453_v3 Cicer arietinum L.
Ca_21500_v3 Cicer arietinum L.
CBR_g2805 Chara braunii
CBR_g31840 Chara braunii
CBR_g32221 Chara braunii
CBR_g50308 Chara braunii
Cc02_g34890 Coffea canephora
Cc03_g00430 Coffea canephora
Cc03_g01030 Coffea canephora
CDE02G4121 Ceratophyllum demersum
CDE05G0849 Ceratophyllum demersum
CDE08G0708 Ceratophyllum demersum
CDE11G0457 Ceratophyllum demersum
Cfa015341 Carpinus fangiana
Cfa015697 Carpinus fangiana
Cfa024911 Carpinus fangiana
Ciclev10004547m.g Citrus clementina
Ciclev10004793m.g Citrus clementina
CiPaw.01G133000 Carya illinoinensis
CiPaw.01G140500 Carya illinoinensis
CiPaw.02G071800 Carya illinoinensis
ClCG05G006730 Citrullus lanatus
ClCG06G004670 Citrullus lanatus
COL.COLO4_34550 Corchorus olitorius
COL.COLO4_34652 Corchorus olitorius
Cpa.g.sc146.65 Carica papaya
Cpa.g.sc929.4 Carica papaya
Cre01.g016514 Chlamydomonas reinhardtii
Cre18.g749847 Chlamydomonas reinhardtii
CsaV3_3G015360 Cucumis sativus L.
CsaV3_6G000070 Cucumis sativus L.
CsaV3_6G022400 Cucumis sativus L.
CSS0001185 Camellia sinensis var. sinensis
CSS0017684 Camellia sinensis var. sinensis
CSS0023274 Camellia sinensis var. sinensis
CSS0023911 Camellia sinensis var. sinensis
CSS0030222 Camellia sinensis var. sinensis
CSS0033292 Camellia sinensis var. sinensis
DCAR_002529 Daucus carota
DCAR_023341 Daucus carota
DCAR_026965 Daucus carota
DCAR_026968 Daucus carota
DCAR_029358 Daucus carota
Dinv06091 Davidia involucrata
Dinv17913 Davidia involucrata
Dinv24427 Davidia involucrata
Dinv29547 Davidia involucrata
Dinv30876 Davidia involucrata
Dinv30877 Davidia involucrata
Dinv39474 Davidia involucrata
Dinv44306 Davidia involucrata
Duzib151G0666 Durio zibethinus
Duzib151G0855 Durio zibethinus
Duzib212G0364 Durio zibethinus
Duzib212G0973 Durio zibethinus
ECA233G2463 Erigeron canadensis
ECA233G4399 Erigeron canadensis
ECA234G2833 Erigeron canadensis
ECA246G0157 Erigeron canadensis
EL10Ac3g05460 Beta vulgaris
EL10Ac3g06287 Beta vulgaris
Eucgr.A00348 Eucalyptus grandis
Eucgr.H04086 Eucalyptus grandis
FAN07G0951 Fragaria x ananassa
FAN07G2065 Fragaria x ananassa
FAN12G2723 Fragaria x ananassa
FAN12G3021 Fragaria x ananassa
FAN12G4136 Fragaria x ananassa
FAN17G2526 Fragaria x ananassa
FvH4_4g19440 Fragaria vesca
FvH4_4g20900 Fragaria vesca
Glyma.07G232900 Glycine max
Glyma.07G241600 Glycine max
Glyma.09G038000 Glycine max
Glyma.15G143100 Glycine max
Glyma.17G032300 Glycine max
Glyma.17G037900 Glycine max
Gohir.A02G056500 Gossypium hirsutum
Gohir.A09G065300 Gossypium hirsutum
Gohir.A09G235400 Gossypium hirsutum
Gohir.D02G061700 Gossypium hirsutum
Gohir.D09G064300 Gossypium hirsutum
Gohir.D09G236200 Gossypium hirsutum
Gorai.005G069400 Gossypium raimondii
Gorai.006G079100 Gossypium raimondii
Gorai.006G259300 Gossypium raimondii
GSVIVG01017638001 Vitis vinifera
GSVIVG01031216001 Vitis vinifera
GSVIVG01031217001 Vitis vinifera
GSVIVG01031225001 Vitis vinifera
GSVIVG01035022001 Vitis vinifera
HanXRQChr05g0148211 Helianthus annuus
HanXRQChr09g0247911 Helianthus annuus
HanXRQChr09g0251531 Helianthus annuus
HanXRQChr09g0259141 Helianthus annuus
HanXRQChr10g0299371 Helianthus annuus
HanXRQChr11g0339361 Helianthus annuus
HanXRQChr11g0353961 Helianthus annuus
HanXRQChr13g0389921 Helianthus annuus
HanXRQChr16g0513481 Helianthus annuus
HanXRQChr17g0552751 Helianthus annuus
Haze_00825 Corylus avellana
Haze_01271 Corylus avellana
Haze_26501 Corylus avellana
Haze_26572 Corylus avellana
Hma1.2p1_0013F.1_g008130 Hydrangea macrophylla
Hma1.2p1_0565F.1_g179390 Hydrangea macrophylla
Hma1.2p1_1206F.1_g267020 Hydrangea macrophylla
HPP92_010933 Vanilla planifolia
HPP92_015251 Vanilla planifolia
HPP92_018272 Vanilla planifolia
HPP92_018273 Vanilla planifolia
Hund03110 Selenicereus undatus
Hund11959 Selenicereus undatus
Hund12235 Selenicereus undatus
Hund12237 Selenicereus undatus
Hund12238 Selenicereus undatus
Hund12239 Selenicereus undatus
Lalb_Chr07g0181861 Lupinus albus
Lalb_Chr07g0182111 Lupinus albus
Lalb_Chr12g0200921 Lupinus albus
Lalb_Chr13g0298771 Lupinus albus
Lj4g0004987 Lotus japonicus
Lj4g0020015 Lotus japonicus
Lj6A688T83 Lonicera japonica
Lj6A697T24 Lonicera japonica
Lj9C219G1 Lonicera japonica
Lju926C12G2 Lonicera japonica
Lsat_1_v5_gn_1_40281 Lactuca sativa
Lsat_1_v5_gn_4_134540 Lactuca sativa
Lsat_1_v5_gn_5_147281 Lactuca sativa
Lsat_1_v5_gn_6_114321 Lactuca sativa
Lsat_1_v5_gn_6_69280 Lactuca sativa
Lsat_1_v5_gn_7_74640 Lactuca sativa
Manes.03G202500 Manihot esculenta
Manes.03G209100 Manihot esculenta
Manes.15G005700 Manihot esculenta
Mapoly0047s0028 Marchantia polymorpha
Mapoly0086s0041 Marchantia polymorpha
MBI18_g28441_MAGBIO Magnolia biondii
MBI18_g31665_MAGBIO Magnolia biondii
MBI18_g36462_MAGBIO Magnolia biondii
MBI19_g32705_MAGBIO Magnolia biondii
MCO02G475 Micromonas commoda
MCO03G195 Micromonas commoda
MD13G1147400 Malus domestica
MD16G1145800 Malus domestica
MD16G1157500 Malus domestica
Medtr2g034580 Medicago truncatula
Medtr4g121880 Medicago truncatula
Medtr4g123070 Medicago truncatula
MELO3C006734.2 Cucumis melo
MELO3C021247.2 Cucumis melo
MELO3C021276.2 Cucumis melo
Migut.G00018 Erythranthe guttata
Migut.G00020 Erythranthe guttata
Migut.G00021 Erythranthe guttata
Migut.G00090 Erythranthe guttata
Migut.G01094 Erythranthe guttata
Migut.M00329 Erythranthe guttata
Migut.N00020 Erythranthe guttata
Migut.N01387 Erythranthe guttata
MSTRG.21750 Avicennia marina
MSTRG.27946 Avicennia marina
Nitab4.5_0000102g0230 Nicotiana tabacum
Nitab4.5_0000155g0040 Nicotiana tabacum
Nitab4.5_0000368g0240 Nicotiana tabacum
Nitab4.5_0000647g0100 Nicotiana tabacum
Nitab4.5_0000651g0090 Nicotiana tabacum
Nitab4.5_0000745g0180 Nicotiana tabacum
Nitab4.5_0000895g0100 Nicotiana tabacum
Nitab4.5_0001035g0030 Nicotiana tabacum
Nitab4.5_0001503g0060 Nicotiana tabacum
Nitab4.5_0005769g0030 Nicotiana tabacum
Nitab4.5_0006365g0040 Nicotiana tabacum
Nitab4.5_0006972g0010 Nicotiana tabacum
Nitab4.5_0008312g0030 Nicotiana tabacum
Nitab4.5_0009767g0010 Nicotiana tabacum
Nn3g21669 Nelumbo nucifera
Nn4g25620 Nelumbo nucifera
Nn5g27155 Nelumbo nucifera
Oeu004763.1 Olea europaea
Oeu014218.2 Olea europaea
Oeu019957.1 Olea europaea
Oeu033618.1 Olea europaea
Oeu052153.1 Olea europaea
Oeu053703.2 Olea europaea
Oeu064814.2 Olea europaea
Oeu064815.1 Olea europaea
Os01g0328700 Oryza sativa ssp. japonica
Os01g0337900 Oryza sativa ssp. japonica
Os03g0662000 Oryza sativa ssp. japonica
Os05g0156700 Oryza sativa ssp. japonica
Os05g0160000 Oryza sativa ssp. japonica
Peaxi162Scf00126g01412 Petunia axillaris
Peaxi162Scf00164g00520 Petunia axillaris
Peaxi162Scf00164g01110 Petunia axillaris
Peaxi162Scf00673g00129 Petunia axillaris
PGR004G0786 Punica granatum
PGR031G0737 Punica granatum
PGR031G3902 Punica granatum
PGSC0003DMG400002777 Solanum tuberosum
PGSC0003DMG400004608 Solanum tuberosum
PGSC0003DMG400027143 Solanum tuberosum
PGSC0003DMG400027156 Solanum tuberosum
PGSC0003DMG400027215 Solanum tuberosum
Phvul.003G112300 Phaseolus vulgaris
Phvul.003G118800 Phaseolus vulgaris
Phvul.009G254900 Phaseolus vulgaris
Potri.008G100800 Populus trichocarpa
Potri.008G107600 Populus trichocarpa
Potri.010G142100 Populus trichocarpa
Potri.010G151400 Populus trichocarpa
Pp3c10_22170 Physcomitrium patens
Pp3c12_12390 Physcomitrium patens
Pp3c14_26780 Physcomitrium patens
Pp3c17_14660 Physcomitrium patens
Pp3c3_35300 Physcomitrium patens
Pp3c8_2050 Physcomitrium patens
PRCOL_00002012 Prasinoderma coloniale
PRCOL_00006115 Prasinoderma coloniale
Prupe.1G110900 Prunus persica
Prupe.1G122400 Prunus persica
Psat0s2692g0120 Pisum sativum
Psat3g002080 Pisum sativum
Psat4g023520 Pisum sativum
PSO170G2751 Papaver somniferum
PSO210G4474 Papaver somniferum
PSO357G0495 Papaver somniferum
PSO761G0396 Papaver somniferum
QL06p011576 Quercus lobata
QL06p013389 Quercus lobata
RcHm_v2.0_Chr4g0424491 Rosa chinensis
RcHm_v2.0_Chr4g0426331 Rosa chinensis
Rhsim02G0001500 Rhododendron simsii
Rhsim04G0237700 Rhododendron simsii
Rhsim04G0244400 Rhododendron simsii
Rhsim05G0133100 Rhododendron simsii
Sabra08G0076200 Salix brachista
Sabra10G0109800 Salix brachista
Sabra10G0116600 Salix brachista
SalBow3G1302 Salvia bowleyana
SalBow5G3375 Salvia bowleyana
SalBow8G1091 Salvia bowleyana
SalBow8G3926 Salvia bowleyana
Sc06g0007560 Simmondsia chinensis
Sc25g0003410 Simmondsia chinensis
Sed0001944 Sechium edule
Sed0002991 Sechium edule
Sed0005001 Sechium edule
Sed0024050 Sechium edule
SEGI_00274 Sequoiadendron giganteum
SEGI_00860 Sequoiadendron giganteum
SEGI_05331 Sequoiadendron giganteum
SEGI_11008 Sequoiadendron giganteum
SEGI_12347 Sequoiadendron giganteum
SEGI_14418 Sequoiadendron giganteum
SEGI_17384 Sequoiadendron giganteum
SEGI_25297 Sequoiadendron giganteum
SEGI_29429 Sequoiadendron giganteum
SEGI_33038 Sequoiadendron giganteum
SEGI_35530 Sequoiadendron giganteum
SGA_v2.0_scaffold123G33409 Striga asiatica
SGA_v2.0_scaffold81G26130 Striga asiatica
SHI00083 Sapria himalayana
SHI00170 Sapria himalayana
SMO236G0052 Selaginella moellendorffii
SMO236G0061 Selaginella moellendorffii
Solyc01g100360.4 Solanum lycopersicum
Solyc05g053100.3 Solanum lycopersicum
Solyc05g053300.3 Solanum lycopersicum
Solyc12g099100.2 Solanum lycopersicum
Sopen01g043880 Solanum pennellii
Sopen05g031610 Solanum pennellii
Sopen05g031810 Solanum pennellii
Sopen12g033810 Solanum pennellii
Sp1g35010 Schrenkiella parvula
Sp3g15190 Schrenkiella parvula
Sp3g15460 Schrenkiella parvula
Sp7g14660 Schrenkiella parvula
TAR362G0163 Trochodendron aralioides
TAR362G0305 Trochodendron aralioides
TAR362G1063 Trochodendron aralioides
TAR365G0248 Trochodendron aralioides
TAR633G0313 Trochodendron aralioides
TAR633G0750 Trochodendron aralioides
THA.LOC104818858 Tarenaya hassleriana
THA.LOC104820298 Tarenaya hassleriana
THA.LOC104820322 Tarenaya hassleriana
THA.LOC104821792 Tarenaya hassleriana
Thecc.04G297100 Theobroma cacao
Thecc.04G308000 Theobroma cacao
Thhalv10011408m.g Eutrema salsugineum
Thhalv10020389m.g Eutrema salsugineum
Thhalv10020551m.g Eutrema salsugineum
Thhalv10024608m.g Eutrema salsugineum
TPR.G12526 Trifolium pratense
TPR.G16826 Trifolium pratense
TPR.G5727 Trifolium pratense
TWI09G0619 Tripterygium wilfordii
TWI09G0712 Tripterygium wilfordii
TWI53G0197 Tripterygium wilfordii
TWI53G0927 Tripterygium wilfordii
unitig_0.g2586 Utricularia gibba
unitig_22.g6349 Utricularia gibba
unitig_22.g6350 Utricularia gibba
unitig_8.g3101 Utricularia gibba
unitig_88.g27705 Utricularia gibba
vmacro07980 Vaccinium macrocarpon
vmacro08065 Vaccinium macrocarpon
vmacro15163 Vaccinium macrocarpon
vmacro19726 Vaccinium macrocarpon
VMungo1215G0600 Vigna mungo
VMungo1215G3107 Vigna mungo
VMungo1309G2956 Vigna mungo
Zm00001eb131070 Zea mays
Zm00001eb282480 Zea mays
Zm00001eb340590 Zea mays
Zm00001eb340900 Zea mays
Zm00001eb345610 Zea mays

User provided reference genes

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