Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02650 Brassica napus
A02p02660 Brassica napus
A05p32430 Brassica napus
A07p35820 Brassica napus
A09p58260 Brassica napus
A10p24030 Brassica napus
Aa31LG11G14830 Aethionema arabicum
Aa31LG11G15080 Aethionema arabicum
Aa31LG5G10690 Aethionema arabicum
Aa31LG8G4230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.206 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3531 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4975 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2097 Anthoceros agrestis
Actinidia06011 Actinidia chinensis
Actinidia18492 Actinidia chinensis
Actinidia31588 Actinidia chinensis
Actinidia35755 Actinidia chinensis
Actinidia36097 Actinidia chinensis
Ah.03g132820 Amaranthus hybridus
Ah.10g032250 Amaranthus hybridus
AL3G30360 Arabidopsis lyrata
AL6G25400 Arabidopsis lyrata
AL6G26240 Arabidopsis lyrata
Aqoxy1G02523 Aquilegia oxysepala
Aqoxy1G04272 Aquilegia oxysepala
Aqoxy3G02505 Aquilegia oxysepala
Aqoxy3G02507 Aquilegia oxysepala
Aqoxy3G02508 Aquilegia oxysepala
Aqoxy3G02901 Aquilegia oxysepala
Aqoxy4G00399 Aquilegia oxysepala
Aqoxy4G01661 Aquilegia oxysepala
Aqoxy4G01785 Aquilegia oxysepala
Aqoxy5G02747 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3VW7XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6HYH4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8040JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B5NWYW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JED5FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z5TSV0 Arachis hypogaea
AT3G17310 Arabidopsis thaliana
AT5G14620 Arabidopsis thaliana
AT5G15380 Arabidopsis thaliana
ATR0693G205 Amborella trichopoda
ATR1091G019 Amborella trichopoda
Atru.chr4.3116 Acer truncatum
Atru.chr6.2336 Acer truncatum
AUR62002581 Chenopodium quinoa
AUR62005407 Chenopodium quinoa
AUR62014067 Chenopodium quinoa
AUR62018181 Chenopodium quinoa
AUR62030003 Chenopodium quinoa
AUR62038667 Chenopodium quinoa
BcaB02g11502 Brassica carinata
BcaB03g14713 Brassica carinata
BcaB06g25818 Brassica carinata
BcaC03g13461 Brassica carinata
BcaC07g38094 Brassica carinata
BcaC07g41145 Brassica carinata
BcaC08g46386 Brassica carinata
BcaC08g46387 Brassica carinata
BcaNung03108 Brassica carinata
BolC2t06648H Brassica oleracea
BolC5t33646H Brassica oleracea
BolC6t39394H Brassica oleracea
BolC6t39395H Brassica oleracea
BolC8t51716H Brassica oleracea
BolC9t59090H Brassica oleracea
BraA02t05234Z Brassica rapa
BraA05t22070Z Brassica rapa
BraA07t31168Z Brassica rapa
BraA09t41213Z Brassica rapa
BraA10t44466Z Brassica rapa
C02p07150 Brassica napus
C05p49060 Brassica napus
C06p40380 Brassica napus
C08p41550 Brassica napus
C09p62500 Brassica napus
CAN.G192.1 Capsicum annuum
CAN.G305.44 Capsicum annuum
CAN.G305.46 Capsicum annuum
CAN.G53.35 Capsicum annuum
CAN.G959.16 Capsicum annuum
CANSAT64G2550 Cannabis sativa
CANSAT78G0618 Cannabis sativa
CARHR075390 Cardamine hirsuta
CARHR092610 Cardamine hirsuta
CARHR197930 Cardamine hirsuta
CARHR198690 Cardamine hirsuta
Carub.0002s1259 Capsella rubella
Carub.0003s1702 Capsella rubella
Carub.0006s1280 Capsella rubella
Carub.0006s1355 Capsella rubella
Ca_04180_v3 Cicer arietinum L.
Ca_21390_v3 Cicer arietinum L.
CBR_g39141 Chara braunii
CBR_g39143 Chara braunii
CBR_g39145 Chara braunii
Cc03_g00380 Coffea canephora
Cc04_g13650 Coffea canephora
Cc09_g04720 Coffea canephora
Cc11_g15320 Coffea canephora
CDE07G0104 Ceratophyllum demersum
CDE11G0463 Ceratophyllum demersum
CDE11G0564 Ceratophyllum demersum
Ciclev10004428m.g Citrus clementina
Ciclev10014911m.g Citrus clementina
CiPaw.01G132200 Carya illinoinensis
CiPaw.03G040400 Carya illinoinensis
CiPaw.04G026200 Carya illinoinensis
ClCG06G004300 Citrullus lanatus
ClCG10G014050 Citrullus lanatus
COL.COLO4_24009 Corchorus olitorius
COL.COLO4_24010 Corchorus olitorius
COL.COLO4_24200 Corchorus olitorius
COL.COLO4_24202 Corchorus olitorius
COL.COLO4_29039 Corchorus olitorius
COL.COLO4_34535 Corchorus olitorius
COL.COLO4_37707 Corchorus olitorius
Cpa.g.sc146.49 Carica papaya
Cpa.g.sc146.50 Carica papaya
Cpa.g.sc470.1 Carica papaya
Cpa.g.sc470.2 Carica papaya
CsaV3_3G042610 Cucumis sativus L.
CsaV3_6G000100 Cucumis sativus L.
CSS0009993 Camellia sinensis var. sinensis
CSS0019924 Camellia sinensis var. sinensis
CSS0020966 Camellia sinensis var. sinensis
CSS0022629 Camellia sinensis var. sinensis
CSS0023287 Camellia sinensis var. sinensis
CSS0027959 Camellia sinensis var. sinensis
CSS0028746 Camellia sinensis var. sinensis
CSS0030691 Camellia sinensis var. sinensis
CSS0032036 Camellia sinensis var. sinensis
CSS0044517 Camellia sinensis var. sinensis
CSS0045059 Camellia sinensis var. sinensis
DCAR_001625 Daucus carota
DCAR_002537 Daucus carota
DCAR_002538 Daucus carota
DCAR_007076 Daucus carota
DCAR_007077 Daucus carota
DCAR_011239 Daucus carota
DCAR_014681 Daucus carota
DCAR_015406 Daucus carota
DCAR_026960 Daucus carota
DCAR_030821 Daucus carota
DCAR_030953 Daucus carota
Dinv15274 Davidia involucrata
Dinv15617 Davidia involucrata
Dinv29541 Davidia involucrata
Dinv33473 Davidia involucrata
Dinv35085 Davidia involucrata
Duzib147G0648 Durio zibethinus
Duzib151G0471 Durio zibethinus
Duzib264G0359 Durio zibethinus
ECA232G3779 Erigeron canadensis
ECA233G3680 Erigeron canadensis
ECA246G3327 Erigeron canadensis
EL10Ac2g02957 Beta vulgaris
EL10Ac2g03138 Beta vulgaris
EL10Ac3g06283 Beta vulgaris
EL10Ac6g13700 Beta vulgaris
Eucgr.H04095 Eucalyptus grandis
Eucgr.J02201 Eucalyptus grandis
Eucgr.J02221 Eucalyptus grandis
FAN02G0888 Fragaria x ananassa
FAN02G2263 Fragaria x ananassa
FAN02G3902 Fragaria x ananassa
FAN05G0645 Fragaria x ananassa
FAN05G1187 Fragaria x ananassa
FAN05G4389 Fragaria x ananassa
FAN05G5520 Fragaria x ananassa
FAN09G3063 Fragaria x ananassa
FAN09G3858 Fragaria x ananassa
FAN09G3971 Fragaria x ananassa
FAN14G0124 Fragaria x ananassa
FAN14G0194 Fragaria x ananassa
FAN14G2299 Fragaria x ananassa
FAN14G2994 Fragaria x ananassa
FAN14G5206 Fragaria x ananassa
FAN19G3050 Fragaria x ananassa
FAN23G0048 Fragaria x ananassa
FAN23G1169 Fragaria x ananassa
FAN26G2765 Fragaria x ananassa
FAN28G1478 Fragaria x ananassa
FvH4_1g24280 Fragaria vesca
FvH4_6g30300 Fragaria vesca
FvH4_6g30450 Fragaria vesca
FvH4_6g50980 Fragaria vesca
Glyma.01G102000 Glycine max
Glyma.02G035700 Glycine max
Glyma.05G005600 Glycine max
Glyma.07G233200 Glycine max
Glyma.17G038300 Glycine max
Glyma.19G006100 Glycine max
Gohir.A02G086500 Gossypium hirsutum
Gohir.A05G358100 Gossypium hirsutum
Gohir.A09G027200 Gossypium hirsutum
Gohir.D02G062500 Gossypium hirsutum
Gohir.D04G056000 Gossypium hirsutum
Gohir.D09G026850 Gossypium hirsutum
Gorai.005G070400 Gossypium raimondii
Gorai.006G031000 Gossypium raimondii
Gorai.012G062900 Gossypium raimondii
GSVIVG01017648001 Vitis vinifera
GSVIVG01032445001 Vitis vinifera
HanXRQChr08g0208681 Helianthus annuus
HanXRQChr09g0266271 Helianthus annuus
HanXRQChr09g0277461 Helianthus annuus
HanXRQChr17g0542351 Helianthus annuus
HanXRQChr17g0548301 Helianthus annuus
Haze_00812 Corylus avellana
Haze_14697 Corylus avellana
Hma1.2p1_0013F.1_g008030 Hydrangea macrophylla
Hma1.2p1_0224F.1_g094660 Hydrangea macrophylla
HPP92_020268 Vanilla planifolia
HPP92_021935 Vanilla planifolia
Hund12636 Selenicereus undatus
Hund22668 Selenicereus undatus
Hund25363 Selenicereus undatus
Hund25364 Selenicereus undatus
Hund26557 Selenicereus undatus
Lalb_Chr05g0228281 Lupinus albus
Lalb_Chr05g0228291 Lupinus albus
Lalb_Chr06g0175881 Lupinus albus
Lalb_Chr12g0200721 Lupinus albus
Lalb_Chr16g0382201 Lupinus albus
Lj2g0005702 Lotus japonicus
Lj2g0010471 Lotus japonicus
Lj3A1054T82 Lonicera japonica
Lj3A838G60 Lonicera japonica
Lj3g0026972 Lotus japonicus
Lj4g0013730 Lotus japonicus
Lj7A594T53 Lonicera japonica
Lj7A595T67 Lonicera japonica
Lju41C37G7 Lonicera japonica
Lsat_1_v5_gn_0_29301 Lactuca sativa
Lsat_1_v5_gn_1_107960 Lactuca sativa
Lsat_1_v5_gn_1_40680 Lactuca sativa
Lsat_1_v5_gn_4_183040 Lactuca sativa
Lsat_1_v5_gn_7_39860 Lactuca sativa
Lsat_1_v5_gn_8_155241 Lactuca sativa
Manes.03G210200 Manihot esculenta
Manes.15G149300 Manihot esculenta
Manes.17G113600 Manihot esculenta
Mapoly0103s0053 Marchantia polymorpha
Mapoly0109s0015 Marchantia polymorpha
MBI10_g28005_MAGBIO Magnolia biondii
MBI16_g27077_MAGBIO Magnolia biondii
MBI18_g09659_MAGBIO Magnolia biondii
MBI18_g11532_MAGBIO Magnolia biondii
MD09G1029900 Malus domestica
MD13G1146100 Malus domestica
MD16G1140200 Malus domestica
MD17G1031900 Malus domestica
Medtr0336s0070 Medicago truncatula
Medtr3g011150 Medicago truncatula
Medtr4g123600 Medicago truncatula
Medtr5g019420 Medicago truncatula
Medtr6g005580 Medicago truncatula
MELO3C009972.2 Cucumis melo
MELO3C021243.2 Cucumis melo
Migut.G00014 Erythranthe guttata
Migut.K01383 Erythranthe guttata
Migut.O00390 Erythranthe guttata
MSTRG.15520 Avicennia marina
Nitab4.5_0000123g0300 Nicotiana tabacum
Nitab4.5_0000140g0060 Nicotiana tabacum
Nitab4.5_0000149g0260 Nicotiana tabacum
Nitab4.5_0000745g0160 Nicotiana tabacum
Nitab4.5_0001289g0140 Nicotiana tabacum
Nitab4.5_0002790g0030 Nicotiana tabacum
Nitab4.5_0008312g0050 Nicotiana tabacum
Nitab4.5_0008344g0030 Nicotiana tabacum
Nn3g16837 Nelumbo nucifera
Nn3g21848 Nelumbo nucifera
Nn6g33667 Nelumbo nucifera
Oeu043039.2 Olea europaea
Oeu050113.1 Olea europaea
Oeu062934.1 Olea europaea
Oeu062935.1 Olea europaea
Oeu063457.1 Olea europaea
Os03g0110800 Oryza sativa ssp. japonica
Os05g0133900 Oryza sativa ssp. japonica
Os05g0313900 Oryza sativa ssp. japonica
Os11g0109200 Oryza sativa ssp. japonica
Os12g0108900 Oryza sativa ssp. japonica
Peaxi162Scf00005g00086 Petunia axillaris
Peaxi162Scf00089g00638 Petunia axillaris
Peaxi162Scf00164g00518 Petunia axillaris
Peaxi162Scf00326g00710 Petunia axillaris
PGR004G0232 Punica granatum
PGR083G0117 Punica granatum
PGSC0003DMG400001934 Solanum tuberosum
PGSC0003DMG400007182 Solanum tuberosum
PGSC0003DMG400015504 Solanum tuberosum
Phvul.002G070300 Phaseolus vulgaris
Phvul.003G119200 Phaseolus vulgaris
Phvul.004G011700 Phaseolus vulgaris
Potri.001G347000 Populus trichocarpa
Potri.010G152200 Populus trichocarpa
Pp3c15_14360 Physcomitrium patens
Pp3c15_14362 Physcomitrium patens
Pp3c15_21430 Physcomitrium patens
Prupe.1G109800 Prunus persica
Prupe.3G287400 Prunus persica
Prupe.8G038800 Prunus persica
Psat0ss1196g0720 Pisum sativum
Psat1g054560 Pisum sativum
Psat7g037520 Pisum sativum
Psat7g037560 Pisum sativum
PSO017G1728 Papaver somniferum
PSO170G0798 Papaver somniferum
PSO170G2013 Papaver somniferum
PSO210G2925 Papaver somniferum
PSO210G5384 Papaver somniferum
PSO357G0340 Papaver somniferum
PSO675G3948 Papaver somniferum
PSO675G4744 Papaver somniferum
PSO717G0042 Papaver somniferum
PSO782G0476 Papaver somniferum
QL02p075785 Quercus lobata
QL03p059565 Quercus lobata
QL05p041139 Quercus lobata
QL06p013631 Quercus lobata
QL93p0073_0367 Quercus lobata
RcHm_v2.0_Chr1g0321571 Rosa chinensis
RcHm_v2.0_Chr1g0321581 Rosa chinensis
RcHm_v2.0_Chr1g0321591 Rosa chinensis
RcHm_v2.0_Chr1g0321601 Rosa chinensis
RcHm_v2.0_Chr1g0322361 Rosa chinensis
RcHm_v2.0_Chr1g0322481 Rosa chinensis
RcHm_v2.0_Chr1g0322501 Rosa chinensis
RcHm_v2.0_Chr1g0322511 Rosa chinensis
RcHm_v2.0_Chr1g0322611 Rosa chinensis
RcHm_v2.0_Chr1g0322621 Rosa chinensis
RcHm_v2.0_Chr1g0322631 Rosa chinensis
RcHm_v2.0_Chr1g0322691 Rosa chinensis
RcHm_v2.0_Chr1g0322751 Rosa chinensis
RcHm_v2.0_Chr1g0322761 Rosa chinensis
RcHm_v2.0_Chr1g0323101 Rosa chinensis
RcHm_v2.0_Chr1g0323111 Rosa chinensis
RcHm_v2.0_Chr1g0323151 Rosa chinensis
RcHm_v2.0_Chr1g0328931 Rosa chinensis
RcHm_v2.0_Chr1g0328981 Rosa chinensis
RcHm_v2.0_Chr1g0328991 Rosa chinensis
RcHm_v2.0_Chr2g0120771 Rosa chinensis
RcHm_v2.0_Chr2g0136781 Rosa chinensis
RcHm_v2.0_Chr2g0136791 Rosa chinensis
RcHm_v2.0_Chr2g0136801 Rosa chinensis
RcHm_v2.0_Chr2g0172381 Rosa chinensis
RcHm_v2.0_Chr2g0172401 Rosa chinensis
RcHm_v2.0_Chr2g0172481 Rosa chinensis
RcHm_v2.0_Chr3g0490961 Rosa chinensis
Rhsim04G0245500 Rhododendron simsii
Rhsim04G0246000 Rhododendron simsii
Rhsim08G0053000 Rhododendron simsii
Rhsim10G0019500 Rhododendron simsii
Rhsim12G0114900 Rhododendron simsii
Sabra10G0117200 Salix brachista
Sabra16G0226700 Salix brachista
SalBow7G2022 Salvia bowleyana
SalBow8G3199 Salvia bowleyana
Sc03g0007690 Simmondsia chinensis
Sc07g0003200 Simmondsia chinensis
Sc19g0002210 Simmondsia chinensis
Sed0004886 Sechium edule
Sed0011250 Sechium edule
Sed0012292 Sechium edule
Sed0014165 Sechium edule
SEGI_09451 Sequoiadendron giganteum
SEGI_20561 Sequoiadendron giganteum
SEGI_26430 Sequoiadendron giganteum
SEGI_30080 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37372 Striga asiatica
SGA_v2.0_scaffold224G42979 Striga asiatica
SGA_v2.0_scaffold30G12437 Striga asiatica
SGA_v2.0_scaffold64G22049 Striga asiatica
SHI00070 Sapria himalayana
SHI00071 Sapria himalayana
SHI00072 Sapria himalayana
SHI25493 Sapria himalayana
SHI25497 Sapria himalayana
SMO115G0034 Selaginella moellendorffii
SMO115G0209 Selaginella moellendorffii
SMO166G0019 Selaginella moellendorffii
SMO364G0536 Selaginella moellendorffii
Solyc02g062740.3 Solanum lycopersicum
Solyc04g005250.4 Solanum lycopersicum
Solyc05g053260.3 Solanum lycopersicum
Solyc05g053270.1 Solanum lycopersicum
Solyc10g078190.2 Solanum lycopersicum
Sopen02g013760 Solanum pennellii
Sopen04g001230 Solanum pennellii
Sopen05g031770 Solanum pennellii
Sopen10g028870 Solanum pennellii
Sp3g15500 Schrenkiella parvula
Sp5g24600 Schrenkiella parvula
Sp6g29410 Schrenkiella parvula
TAR362G0224 Trochodendron aralioides
TAR374G1638 Trochodendron aralioides
TAR622G1371 Trochodendron aralioides
THA.LOC104821084 Tarenaya hassleriana
THA.LOC104821883 Tarenaya hassleriana
Thecc.04G012400 Theobroma cacao
Thecc.04G309100 Theobroma cacao
Thhalv10000125m.g Eutrema salsugineum
Thhalv10013122m.g Eutrema salsugineum
Thhalv10019614m.g Eutrema salsugineum
Thhalv10020166m.g Eutrema salsugineum
Thhalv10022170m.g Eutrema salsugineum
TPR.G12687 Trifolium pratense
TPR.G8713 Trifolium pratense
TWI09G0618 Tripterygium wilfordii
TWI15G0287 Tripterygium wilfordii
TWI36G1733 Tripterygium wilfordii
unitig_0.g2799 Utricularia gibba
unitig_46.g18704 Utricularia gibba
vmacro05843 Vaccinium macrocarpon
vmacro07989 Vaccinium macrocarpon
vmacro16229 Vaccinium macrocarpon
vmacro18261 Vaccinium macrocarpon
vmacro18262 Vaccinium macrocarpon
VMungo0464G0844 Vigna mungo
VMungo1215G1431 Vigna mungo
VMungo1215G3159 Vigna mungo
Zm00001eb000820 Zea mays
Zm00001eb354730 Zea mays
Zm00001eb404130 Zea mays

User provided reference genes

Program Settings