Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia12455 Actinidia chinensis
Actinidia26014 Actinidia chinensis
Actinidia29669 Actinidia chinensis
Ah.01g017020 Amaranthus hybridus
Ah.04g152200 Amaranthus hybridus
Ah.07g200780 Amaranthus hybridus
Ah.14g082260 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.06TEM4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0WE2W7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1UL4FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1ZUZ54 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2ELG64 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.37HYKA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.486ADY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4HIY73 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.50R0Y8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5N34JX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5PMJ60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5Y9MTZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6K70C8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78R4V6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7B0ACA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W1B0F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8XG5WK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90C8Z0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9MZ5HL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A89EQ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ADN3D2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BZ4YM3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CUW4CV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CVQ7TS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD6RUZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FZJ4PH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3S6MP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GJI94B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HF790K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I5UGXE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IC7WFX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JN7S8K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KH6B5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6A5G2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LUKB4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NRK3PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0BRAJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3DR9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PQ0I8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS7FJ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q56HID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMA2H8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN7II1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RP4NXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S0UFBH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6CN8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T8ALRF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THM2IN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2Q3GN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWE409 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4II7B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WE1EI7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0PLFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWW6BT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z00V7E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZKXL37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYLI8Y Arachis hypogaea
Atru.chr1.2844 Acer truncatum
Atru.chr1.3376 Acer truncatum
Atru.chr2.3001 Acer truncatum
Atru.chr6.1364 Acer truncatum
Atru.chr6.1369 Acer truncatum
AUR62000358 Chenopodium quinoa
AUR62006703 Chenopodium quinoa
AUR62006718 Chenopodium quinoa
AUR62006719 Chenopodium quinoa
AUR62015215 Chenopodium quinoa
AUR62017679 Chenopodium quinoa
AUR62022289 Chenopodium quinoa
AUR62022291 Chenopodium quinoa
AUR62022295 Chenopodium quinoa
AUR62023315 Chenopodium quinoa
AUR62023316 Chenopodium quinoa
AUR62023317 Chenopodium quinoa
AUR62023877 Chenopodium quinoa
AUR62023879 Chenopodium quinoa
AUR62030146 Chenopodium quinoa
AUR62038356 Chenopodium quinoa
AUR62041873 Chenopodium quinoa
AUR62041874 Chenopodium quinoa
CAN.G1124.4 Capsicum annuum
CAN.G1155.16 Capsicum annuum
CAN.G1349.10 Capsicum annuum
CAN.G1349.9 Capsicum annuum
CAN.G1373.24 Capsicum annuum
CAN.G1668.1 Capsicum annuum
CAN.G635.10 Capsicum annuum
CAN.G635.11 Capsicum annuum
CAN.G635.12 Capsicum annuum
CAN.G635.20 Capsicum annuum
CAN.G635.21 Capsicum annuum
CAN.G635.22 Capsicum annuum
CAN.G635.4 Capsicum annuum
CAN.G635.5 Capsicum annuum
CAN.G635.7 Capsicum annuum
CAN.G635.8 Capsicum annuum
CAN.G635.9 Capsicum annuum
CAN.G638.22 Capsicum annuum
CAN.G723.10 Capsicum annuum
CAN.G790.30 Capsicum annuum
CAN.G790.34 Capsicum annuum
CAN.G825.31 Capsicum annuum
CANSAT01G2812 Cannabis sativa
CANSAT35G0123 Cannabis sativa
CANSAT35G0270 Cannabis sativa
CANSAT54G0138 Cannabis sativa
CANSAT56G1846 Cannabis sativa
Ca_01177_v3 Cicer arietinum L.
Cc00_g15990 Coffea canephora
Cc04_g07320 Coffea canephora
Cc04_g07340 Coffea canephora
Cc05_g11410 Coffea canephora
Cfa003613 Carpinus fangiana
Cfa014267 Carpinus fangiana
Cfa014268 Carpinus fangiana
Cfa014269 Carpinus fangiana
Cfa014270 Carpinus fangiana
Cfa014272 Carpinus fangiana
Cfa015667 Carpinus fangiana
Cfa020687 Carpinus fangiana
Cfa020765 Carpinus fangiana
Cfa020766 Carpinus fangiana
Cfa020769 Carpinus fangiana
Ciclev10000694m.g Citrus clementina
Ciclev10002726m.g Citrus clementina
Ciclev10003331m.g Citrus clementina
Ciclev10003686m.g Citrus clementina
Ciclev10025241m.g Citrus clementina
Ciclev10025281m.g Citrus clementina
Ciclev10025282m.g Citrus clementina
Ciclev10025305m.g Citrus clementina
Ciclev10025322m.g Citrus clementina
Ciclev10025841m.g Citrus clementina
Ciclev10026860m.g Citrus clementina
Ciclev10026961m.g Citrus clementina
Ciclev10026993m.g Citrus clementina
Ciclev10027014m.g Citrus clementina
Ciclev10027156m.g Citrus clementina
Ciclev10027487m.g Citrus clementina
Ciclev10027565m.g Citrus clementina
Ciclev10031194m.g Citrus clementina
Ciclev10033697m.g Citrus clementina
CiPaw.01G227900 Carya illinoinensis
CiPaw.15G162600 Carya illinoinensis
ClCG07G013540 Citrullus lanatus
ClCG07G013570 Citrullus lanatus
COL.COLO4_07576 Corchorus olitorius
COL.COLO4_10030 Corchorus olitorius
COL.COLO4_12878 Corchorus olitorius
COL.COLO4_12879 Corchorus olitorius
COL.COLO4_21800 Corchorus olitorius
COL.COLO4_30418 Corchorus olitorius
COL.COLO4_30548 Corchorus olitorius
COL.COLO4_30549 Corchorus olitorius
Cpa.g.sc116.78 Carica papaya
Cpa.g.sc116.79 Carica papaya
Cpa.g.sc116.90 Carica papaya
Cpa.g.sc17.157 Carica papaya
CsaV3_3G044070 Cucumis sativus L.
CsaV3_3G044110 Cucumis sativus L.
CSS0008515 Camellia sinensis var. sinensis
CSS0009889 Camellia sinensis var. sinensis
CSS0020801 Camellia sinensis var. sinensis
CSS0028141 Camellia sinensis var. sinensis
CSS0038081 Camellia sinensis var. sinensis
Dinv15486 Davidia involucrata
Dinv15487 Davidia involucrata
Dinv37940 Davidia involucrata
Dinv40414 Davidia involucrata
ECA232G1631 Erigeron canadensis
ECA238G0337 Erigeron canadensis
ECA238G0822 Erigeron canadensis
ECA238G1228 Erigeron canadensis
ECA238G1278 Erigeron canadensis
ECA238G4135 Erigeron canadensis
ECA247G1279 Erigeron canadensis
ECA247G3044 Erigeron canadensis
ECA247G3299 Erigeron canadensis
ECA248G1607 Erigeron canadensis
EL10Ac2g04568 Beta vulgaris
EL10Ac3g05729 Beta vulgaris
EL10Ac3g05730 Beta vulgaris
EL10Ac9g21142 Beta vulgaris
EL10Ac9g21149 Beta vulgaris
Eucgr.F03097 Eucalyptus grandis
Eucgr.J00725 Eucalyptus grandis
FAN02G0884 Fragaria x ananassa
FAN03G1733 Fragaria x ananassa
FAN08G3633 Fragaria x ananassa
FAN09G3829 Fragaria x ananassa
FAN09G4555 Fragaria x ananassa
FAN18G1143 Fragaria x ananassa
FvH4_6g32840 Fragaria vesca
Glyma.08G195400 Glycine max
Glyma.08G195600 Glycine max
Glyma.08G196750 Glycine max
Glyma.13G352351 Glycine max
Gohir.A05G133200 Gossypium hirsutum
Gohir.D05G135050 Gossypium hirsutum
Gohir.D05G135100 Gossypium hirsutum
Gorai.009G138900 Gossypium raimondii
GSVIVG01015924001 Vitis vinifera
GSVIVG01016827001 Vitis vinifera
GSVIVG01016837001 Vitis vinifera
GSVIVG01016843001 Vitis vinifera
GSVIVG01019054001 Vitis vinifera
GSVIVG01034260001 Vitis vinifera
HanXRQChr03g0063571 Helianthus annuus
HanXRQChr09g0238591 Helianthus annuus
HanXRQChr09g0276031 Helianthus annuus
HanXRQChr12g0365501 Helianthus annuus
HanXRQChr12g0365511 Helianthus annuus
HanXRQChr12g0365551 Helianthus annuus
HanXRQChr12g0365561 Helianthus annuus
HanXRQChr12g0365571 Helianthus annuus
HanXRQChr13g0414821 Helianthus annuus
HanXRQChr13g0414831 Helianthus annuus
HanXRQChr14g0450111 Helianthus annuus
HanXRQChr15g0470321 Helianthus annuus
HanXRQChr15g0470331 Helianthus annuus
HanXRQChr15g0484011 Helianthus annuus
HanXRQChr17g0542111 Helianthus annuus
HanXRQChr17g0544711 Helianthus annuus
HanXRQChr17g0544731 Helianthus annuus
HanXRQChr17g0544741 Helianthus annuus
Haze_00867 Corylus avellana
Haze_03787 Corylus avellana
Haze_04928 Corylus avellana
Haze_06365 Corylus avellana
Haze_12716 Corylus avellana
Haze_15913 Corylus avellana
Haze_18864 Corylus avellana
Haze_18899 Corylus avellana
Haze_18944 Corylus avellana
Haze_18985 Corylus avellana
Haze_19062 Corylus avellana
Haze_19068 Corylus avellana
Haze_19074 Corylus avellana
Haze_19075 Corylus avellana
Haze_27459 Corylus avellana
Hma1.2p1_0388F.1_g142070 Hydrangea macrophylla
Hma1.2p1_0388F.1_g142450 Hydrangea macrophylla
Hma1.2p1_0643F.1_g194680 Hydrangea macrophylla
Hma1.2p1_0978F.1_g243340 Hydrangea macrophylla
Hma1.2p1_2617F.1_g325500 Hydrangea macrophylla
Hund19372 Selenicereus undatus
Lalb_Chr03g0038821 Lupinus albus
Lalb_Chr03g0041541 Lupinus albus
Lalb_Chr04g0263061 Lupinus albus
Lalb_Chr04g0263071 Lupinus albus
Lj3g0009862 Lotus japonicus
Lj3g0011959 Lotus japonicus
Lj3g0014094 Lotus japonicus
Lj3g0022321 Lotus japonicus
Lj3g0023065 Lotus japonicus
Lsat_1_v5_gn_3_39741 Lactuca sativa
Manes.04G135400 Manihot esculenta
Manes.07G068500 Manihot esculenta
Manes.09G003200 Manihot esculenta
Manes.11G029400 Manihot esculenta
Manes.11G030101 Manihot esculenta
Manes.11G030201 Manihot esculenta
Manes.13G151200 Manihot esculenta
MD09G1197600 Malus domestica
MD17G1178500 Malus domestica
Medtr2g100570 Medicago truncatula
Medtr2g100590 Medicago truncatula
Medtr4g119700 Medicago truncatula
Medtr6g005890 Medicago truncatula
Medtr6g006730 Medicago truncatula
Medtr6g006740 Medicago truncatula
Medtr6g006750 Medicago truncatula
Medtr6g006760 Medicago truncatula
Medtr6g045563 Medicago truncatula
Medtr7g016460 Medicago truncatula
Medtr7g025080 Medicago truncatula
Medtr7g025650 Medicago truncatula
Medtr8g008643 Medicago truncatula
Medtr8g015670 Medicago truncatula
Medtr8g015680 Medicago truncatula
Medtr8g015720 Medicago truncatula
Medtr8g015770 Medicago truncatula
Medtr8g015830 Medicago truncatula
Medtr8g018340 Medicago truncatula
MELO3C013024.2 Cucumis melo
Migut.D00982 Erythranthe guttata
Nitab4.5_0000255g0120 Nicotiana tabacum
Nitab4.5_0001927g0030 Nicotiana tabacum
Nitab4.5_0002656g0100 Nicotiana tabacum
Nitab4.5_0004848g0100 Nicotiana tabacum
Nitab4.5_0005029g0060 Nicotiana tabacum
Nitab4.5_0005661g0030 Nicotiana tabacum
Nitab4.5_0006071g0070 Nicotiana tabacum
Nitab4.5_0009241g0030 Nicotiana tabacum
Oeu037539.1 Olea europaea
Peaxi162Scf00038g01239 Petunia axillaris
Peaxi162Scf00152g10132 Petunia axillaris
Peaxi162Scf00202g02030 Petunia axillaris
Peaxi162Scf00207g01132 Petunia axillaris
Peaxi162Scf00421g00326 Petunia axillaris
Peaxi162Scf00548g00535 Petunia axillaris
Peaxi162Scf00840g00015 Petunia axillaris
PGR031G0401 Punica granatum
PGR031G2240 Punica granatum
PGR083G0024 Punica granatum
PGR083G0102 Punica granatum
PGR083G0242 Punica granatum
PGR083G1604 Punica granatum
PGR083G1630 Punica granatum
PGR083G1644 Punica granatum
PGR083G1680 Punica granatum
PGR083G1995 Punica granatum
PGR083G2101 Punica granatum
PGR083G2166 Punica granatum
PGR083G2268 Punica granatum
PGR083G2834 Punica granatum
PGR142G1584 Punica granatum
PGSC0003DMG400002600 Solanum tuberosum
PGSC0003DMG400004877 Solanum tuberosum
PGSC0003DMG400009532 Solanum tuberosum
PGSC0003DMG400028156 Solanum tuberosum
PGSC0003DMG400042486 Solanum tuberosum
PGSC0003DMG400043237 Solanum tuberosum
Potri.001G395000 Populus trichocarpa
Potri.012G099400 Populus trichocarpa
Potri.013G146800 Populus trichocarpa
Potri.017G146300 Populus trichocarpa
Potri.017G146400 Populus trichocarpa
Potri.017G146500 Populus trichocarpa
Prupe.3G053600 Prunus persica
Psat5g295000 Pisum sativum
QL01p017794 Quercus lobata
QL01p017812 Quercus lobata
QL01p054884 Quercus lobata
QL02p029477 Quercus lobata
QL02p089995 Quercus lobata
QL02p094064 Quercus lobata
QL03p032024 Quercus lobata
QL03p072973 Quercus lobata
QL04p060682 Quercus lobata
QL04p060686 Quercus lobata
QL04p060738 Quercus lobata
QL04p073995 Quercus lobata
QL04p079456 Quercus lobata
QL05p009096 Quercus lobata
QL05p010063 Quercus lobata
QL05p015536 Quercus lobata
QL05p015815 Quercus lobata
QL05p016344 Quercus lobata
QL05p016363 Quercus lobata
QL05p016491 Quercus lobata
QL05p016571 Quercus lobata
QL05p018022 Quercus lobata
QL05p018061 Quercus lobata
QL05p018582 Quercus lobata
QL05p032198 Quercus lobata
QL05p032382 Quercus lobata
QL05p033764 Quercus lobata
QL05p053661 Quercus lobata
QL08p037386 Quercus lobata
QL08p037410 Quercus lobata
QL11p055690 Quercus lobata
QL93p1866_0198 Quercus lobata
RcHm_v2.0_Chr2g0142131 Rosa chinensis
Rhsim02G0017300 Rhododendron simsii
Rhsim04G0063700 Rhododendron simsii
Rhsim04G0225400 Rhododendron simsii
Rhsim04G0225500 Rhododendron simsii
Rhsim06G0151700 Rhododendron simsii
Rhsim07G0244500 Rhododendron simsii
Rhsim08G0029500 Rhododendron simsii
Rhsim08G0230500 Rhododendron simsii
Rhsim08G0241400 Rhododendron simsii
Sabra12G0072600 Salix brachista
Sabra13G0118300 Salix brachista
Sabra17G0122000 Salix brachista
Sabra17G0122200 Salix brachista
Sabra17G0122500 Salix brachista
Sabra17G0122700 Salix brachista
Sabra17G0122800 Salix brachista
Sabra18G0007100 Salix brachista
Sabra18G0007200 Salix brachista
Sabra19G0116100 Salix brachista
Sabra19G0116900 Salix brachista
Sabra19G0136900 Salix brachista
Sabra19G0137700 Salix brachista
Sed0010878 Sechium edule
Sed0016693 Sechium edule
SGA_v2.0_scaffold4G02035 Striga asiatica
Solyc03g121290.4 Solanum lycopersicum
Solyc06g066475.1 Solanum lycopersicum
Sopen03g040100 Solanum pennellii
Sopen06g021920 Solanum pennellii
Sopen12g022970 Solanum pennellii
Thecc.06G107000 Theobroma cacao
TPR.G20546 Trifolium pratense
TPR.G22239 Trifolium pratense
TPR.G2255 Trifolium pratense
TPR.G2273 Trifolium pratense
TPR.G2299 Trifolium pratense
TPR.G2309 Trifolium pratense
TPR.G2320 Trifolium pratense
TPR.G24233 Trifolium pratense
TPR.G24235 Trifolium pratense
TPR.G24246 Trifolium pratense
TPR.G31446 Trifolium pratense
TPR.G31449 Trifolium pratense
TPR.G35374 Trifolium pratense
TPR.G35376 Trifolium pratense
TPR.G35377 Trifolium pratense
TPR.G35384 Trifolium pratense
TPR.G36136 Trifolium pratense
TPR.G3906 Trifolium pratense
TPR.G39736 Trifolium pratense
TPR.G578 Trifolium pratense
TPR.G6557 Trifolium pratense
TPR.G7910 Trifolium pratense
TPR.G7925 Trifolium pratense
TPR.G7928 Trifolium pratense
TWI39G0090 Tripterygium wilfordii
TWI53G1096 Tripterygium wilfordii
vmacro18828 Vaccinium macrocarpon
vmacro19298 Vaccinium macrocarpon

User provided reference genes

Program Settings