Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08370 Brassica napus
A03p10770 Brassica napus
A03p59200 Brassica napus
A07p01370 Brassica napus
A07p12870 Brassica napus
A07p16310 Brassica napus
A10p18380 Brassica napus
Aa31LG1G13070 Aethionema arabicum
Aa31LG2G20750 Aethionema arabicum
Aa31LG8G16400 Aethionema arabicum
Actinidia18603 Actinidia chinensis
Actinidia25236 Actinidia chinensis
Actinidia25237 Actinidia chinensis
Actinidia34721 Actinidia chinensis
Actinidia39703 Actinidia chinensis
Ah.04g160200 Amaranthus hybridus
Ah.06g186590 Amaranthus hybridus
Ah.07g200020 Amaranthus hybridus
Ah.08g215760 Amaranthus hybridus
AL3G48930 Arabidopsis lyrata
AL6G33470 Arabidopsis lyrata
AL7G22460 Arabidopsis lyrata
Aqoxy2G01208 Aquilegia oxysepala
Aqoxy4G02787 Aquilegia oxysepala
Aqoxy7G01143 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Q6J36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D0TANL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCKF4Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QELJ5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6EJVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WV99JK Arachis hypogaea
AT2G19390 Arabidopsis thaliana
AT4G29790 Arabidopsis thaliana
AT5G22450 Arabidopsis thaliana
ATR0776G073 Amborella trichopoda
ATR0796G235 Amborella trichopoda
Atru.chr12.1021 Acer truncatum
Atru.chr3.3258 Acer truncatum
Atru.chr3.3259 Acer truncatum
Atru.chr3.3260 Acer truncatum
Atru.chr3.3271 Acer truncatum
Atru.chr7.1642_Atru.chr7.1643 Acer truncatum
AUR62009765 Chenopodium quinoa
AUR62039212 Chenopodium quinoa
AUR62042078 Chenopodium quinoa
AUR62043603 Chenopodium quinoa
AUR62043884 Chenopodium quinoa
BcaB01g04709 Brassica carinata
BcaB03g14391 Brassica carinata
BcaB03g16725 Brassica carinata
BcaB08g34859 Brassica carinata
BcaB08g36430 Brassica carinata
BcaC01g06581 Brassica carinata
BcaC04g19574 Brassica carinata
BcaC05g28106 Brassica carinata
BcaC06g36569 Brassica carinata
BcaC09g51756 Brassica carinata
BcaC09g51757 Brassica carinata
BcaNung00494 Brassica carinata
BolC1t00929H Brassica oleracea
BolC3t13708H Brassica oleracea
BolC7t40680H Brassica oleracea
BolC7t42924H Brassica oleracea
BolC7t46195H Brassica oleracea
BolC9t58285H Brassica oleracea
BraA01t00785Z Brassica rapa
BraA03t10386Z Brassica rapa
BraA03t14978Z Brassica rapa
BraA03t14979Z Brassica rapa
BraA07t27931Z Brassica rapa
BraA07t27932Z Brassica rapa
BraA07t29062Z Brassica rapa
BraA07t29358Z Brassica rapa
BraA10t43919Z Brassica rapa
C01p09410 Brassica napus
C03p12360 Brassica napus
C07p02830 Brassica napus
C07p24000 Brassica napus
C07p57250 Brassica napus
C09p54140 Brassica napus
CAN.G147.1 Capsicum annuum
CAN.G148.8 Capsicum annuum
CAN.G2.22 Capsicum annuum
CAN.G645.9 Capsicum annuum
CANSAT54G2058 Cannabis sativa
CANSAT56G2626 Cannabis sativa
CARHR109840 Cardamine hirsuta
CARHR191080 Cardamine hirsuta
CARHR237690 Cardamine hirsuta
Carub.0003s3365 Capsella rubella
Carub.0004s1484 Capsella rubella
Carub.0006s2019 Capsella rubella
Ca_13136_v3 Cicer arietinum L.
Ca_19403_v3 Cicer arietinum L.
Ca_21299_v3 Cicer arietinum L.
Ca_25668_v3 Cicer arietinum L.
CBR_g8979 Chara braunii
Cc01_g09300 Coffea canephora
Cc02_g09670 Coffea canephora
Cc06_g11730 Coffea canephora
CDE02G0607 Ceratophyllum demersum
CDE04G0166 Ceratophyllum demersum
CDE04G1282 Ceratophyllum demersum
CDE08G1280 Ceratophyllum demersum
Cfa010019 Carpinus fangiana
Cfa011271 Carpinus fangiana
Ciclev10007265m.g Citrus clementina
Ciclev10014071m.g Citrus clementina
Ciclev10027692m.g Citrus clementina
CiPaw.03G211600 Carya illinoinensis
CiPaw.04G147500 Carya illinoinensis
CiPaw.13G039100 Carya illinoinensis
CiPaw.13G136500 Carya illinoinensis
CiPaw.14G100500 Carya illinoinensis
ClCG01G012310 Citrullus lanatus
ClCG03G015370 Citrullus lanatus
ClCG08G008240 Citrullus lanatus
COL.COLO4_18160 Corchorus olitorius
COL.COLO4_19888 Corchorus olitorius
Cpa.g.sc28.119 Carica papaya
Cpa.g.sc32.9 Carica papaya
Cpa.g.sc371.6 Carica papaya
Cpa.g.sc5.265 Carica papaya
Cpa.g.sc5.266 Carica papaya
CsaV3_1G014760 Cucumis sativus L.
CsaV3_1G040680 Cucumis sativus L.
CsaV3_6G004200 Cucumis sativus L.
CSS0004564 Camellia sinensis var. sinensis
CSS0011313 Camellia sinensis var. sinensis
CSS0031265 Camellia sinensis var. sinensis
CSS0043968 Camellia sinensis var. sinensis
DCAR_011960 Daucus carota
DCAR_028279 Daucus carota
Dinv09611 Davidia involucrata
Dinv11840 Davidia involucrata
Dinv29475 Davidia involucrata
Dinv36794 Davidia involucrata
Dinv42346 Davidia involucrata
Dinv42347 Davidia involucrata
Dinv42560 Davidia involucrata
Duzib168G0030 Durio zibethinus
Duzib168G1834 Durio zibethinus
Duzib170G0349 Durio zibethinus
ECA233G4119 Erigeron canadensis
ECA234G1107 Erigeron canadensis
ECA236G0261 Erigeron canadensis
ECA238G1968 Erigeron canadensis
ECA240G2936 Erigeron canadensis
EL10Ac4g08683 Beta vulgaris
EL10Ac7g15816 Beta vulgaris
Eucgr.C00851 Eucalyptus grandis
Eucgr.G02691 Eucalyptus grandis
Eucgr.J00488 Eucalyptus grandis
Eucgr.J00489 Eucalyptus grandis
FAN11G3006 Fragaria x ananassa
FAN16G3735 Fragaria x ananassa
FAN19G1804 Fragaria x ananassa
FAN21G0439 Fragaria x ananassa
FAN23G1581 Fragaria x ananassa
FAN23G2942 Fragaria x ananassa
FAN23G3031 Fragaria x ananassa
FAN25G0444 Fragaria x ananassa
FAN25G2902 Fragaria x ananassa
FAN26G1912 Fragaria x ananassa
FAN26G2859 Fragaria x ananassa
FvH4_1g08000 Fragaria vesca
FvH4_3g24820 Fragaria vesca
Glyma.01G148201 Glycine max
Glyma.09G066400 Glycine max
Glyma.10G279400 Glycine max
Glyma.11G183800 Glycine max
Glyma.12G088600 Glycine max
Glyma.13G106700 Glycine max
Glyma.15G172400 Glycine max
Glyma.17G052600 Glycine max
Glyma.20G110300 Glycine max
Gohir.A05G031800 Gossypium hirsutum
Gohir.A06G074000 Gossypium hirsutum
Gohir.A07G012900 Gossypium hirsutum
Gohir.A08G004900 Gossypium hirsutum
Gohir.A09G095266 Gossypium hirsutum
Gohir.A09G095332 Gossypium hirsutum
Gohir.D05G033300 Gossypium hirsutum
Gohir.D06G072900 Gossypium hirsutum
Gohir.D07G012700 Gossypium hirsutum
Gohir.D08G015200 Gossypium hirsutum
Gohir.D09G095000 Gossypium hirsutum
Gorai.001G013400 Gossypium raimondii
Gorai.004G009700 Gossypium raimondii
Gorai.006G111700 Gossypium raimondii
Gorai.009G033700 Gossypium raimondii
Gorai.010G084900 Gossypium raimondii
GSVIVG01001003001 Vitis vinifera
GSVIVG01015158001 Vitis vinifera
GSVIVG01036136001 Vitis vinifera
HanXRQChr03g0060221 Helianthus annuus
HanXRQChr04g0126081 Helianthus annuus
HanXRQChr06g0178201 Helianthus annuus
HanXRQChr07g0194031 Helianthus annuus
HanXRQChr08g0217521 Helianthus annuus
HanXRQChr09g0237911 Helianthus annuus
HanXRQChr11g0342131 Helianthus annuus
Haze_02510 Corylus avellana
Haze_23380 Corylus avellana
Haze_25947 Corylus avellana
Hma1.2p1_0578F.1_g182440 Hydrangea macrophylla
Hma1.2p1_0578F.1_g182450 Hydrangea macrophylla
Hma1.2p1_0709F.1_g207170 Hydrangea macrophylla
HPP92_009872 Vanilla planifolia
HPP92_009873 Vanilla planifolia
HPP92_023749 Vanilla planifolia
HPP92_023750 Vanilla planifolia
HPP92_023751 Vanilla planifolia
Hund06780 Selenicereus undatus
Hund18753 Selenicereus undatus
Hund22277 Selenicereus undatus
Hund30411 Selenicereus undatus
Hund30564 Selenicereus undatus
Lalb_Chr01g0004831 Lupinus albus
Lalb_Chr02g0146301 Lupinus albus
Lalb_Chr03g0028061 Lupinus albus
Lalb_Chr03g0028071 Lupinus albus
Lalb_Chr06g0166431 Lupinus albus
Lalb_Chr06g0166441 Lupinus albus
Lalb_Chr07g0180961 Lupinus albus
Lalb_Chr08g0232421 Lupinus albus
Lalb_Chr11g0074481 Lupinus albus
Lalb_Chr12g0199931 Lupinus albus
Lalb_Chr23g0276451 Lupinus albus
Lj2A32G30 Lonicera japonica
Lj2P32T18 Lonicera japonica
Lj3A926G42 Lonicera japonica
Lj3A926T42 Lonicera japonica
Lj3g0024252 Lotus japonicus
Lj4A289G12 Lonicera japonica
Lj4g0027157 Lotus japonicus
Lj5g0021705 Lotus japonicus
Lj6g0000184 Lotus japonicus
Lj7C680G13 Lonicera japonica
Lsat_1_v5_gn_2_104501 Lactuca sativa
Lsat_1_v5_gn_7_34640 Lactuca sativa
Lsat_1_v5_gn_8_24060 Lactuca sativa
Lsat_1_v5_gn_8_86180 Lactuca sativa
Manes.03G036800 Manihot esculenta
Manes.04G061300 Manihot esculenta
Manes.11G161400 Manihot esculenta
Manes.16G099400 Manihot esculenta
Mapoly0043s0055 Marchantia polymorpha
MBI05_g28279_MAGBIO Magnolia biondii
MBI07_g06424_MAGBIO Magnolia biondii
MBI07_g36901_MAGBIO Magnolia biondii
MBI13_g43380_MAGBIO Magnolia biondii
MBI15_g09708_MAGBIO Magnolia biondii
MBI15_g41446_MAGBIO Magnolia biondii
MBI17_g25749_MAGBIO Magnolia biondii
MBI18_g41619_MAGBIO Magnolia biondii
MBI19_g13220_MAGBIO Magnolia biondii
MD02G1084500 Malus domestica
MD02G1256900 Malus domestica
MD03G1143400 Malus domestica
MD07G1063600 Malus domestica
MD11G1164200 Malus domestica
MD15G1211900 Malus domestica
Medtr1g112190 Medicago truncatula
Medtr2g040470 Medicago truncatula
Medtr4g053240 Medicago truncatula
Medtr4g123547 Medicago truncatula
Medtr4g125820 Medicago truncatula
MELO3C004729.2 Cucumis melo
MELO3C015496.2 Cucumis melo
MELO3C030059.2 Cucumis melo
Migut.F00880 Erythranthe guttata
Migut.F01609 Erythranthe guttata
Migut.J00563 Erythranthe guttata
MSTRG.19487 Avicennia marina
MSTRG.26448 Avicennia marina
MSTRG.9062 Avicennia marina
Nitab4.5_0000024g0030 Nicotiana tabacum
Nitab4.5_0001437g0050 Nicotiana tabacum
Nitab4.5_0001519g0190 Nicotiana tabacum
Nitab4.5_0002079g0010 Nicotiana tabacum
Nitab4.5_0002945g0020 Nicotiana tabacum
Nitab4.5_0005622g0050 Nicotiana tabacum
Nn2g14146 Nelumbo nucifera
Nn6g31765 Nelumbo nucifera
Nn6g34918 Nelumbo nucifera
Nn6g35551 Nelumbo nucifera
Nn8g38767 Nelumbo nucifera
Oeu000307.1 Olea europaea
Oeu025601.3 Olea europaea
Oeu032804.1 Olea europaea
Oeu036826.1 Olea europaea
Oeu036843.2 Olea europaea
Oeu054398.1 Olea europaea
Os01g0967100 Oryza sativa ssp. japonica
Os05g0107300 Oryza sativa ssp. japonica
Os05g0350700 Oryza sativa ssp. japonica
Peaxi162Scf00173g00326 Petunia axillaris
Peaxi162Scf00724g00116 Petunia axillaris
PGR119G2029 Punica granatum
PGR142G1033 Punica granatum
PGR142G4403 Punica granatum
PGSC0003DMG400023989 Solanum tuberosum
Phvul.003G134300 Phaseolus vulgaris
Phvul.007G021900 Phaseolus vulgaris
Phvul.009G230000 Phaseolus vulgaris
Phvul.011G093600 Phaseolus vulgaris
Potri.004G203500 Populus trichocarpa
Potri.006G146600 Populus trichocarpa
Potri.006G146700 Populus trichocarpa
Potri.008G020600 Populus trichocarpa
Potri.009G164400 Populus trichocarpa
Potri.010G238400 Populus trichocarpa
Potri.018G056400 Populus trichocarpa
Pp3c15_5990 Physcomitrium patens
Pp3c20_610 Physcomitrium patens
Pp3c20_790 Physcomitrium patens
Pp3c20_840 Physcomitrium patens
Pp3c23_22150 Physcomitrium patens
Pp3c23_22170 Physcomitrium patens
Pp3c23_22200 Physcomitrium patens
Prupe.2G075900 Prunus persica
Prupe.6G129000 Prunus persica
Prupe.7G204900 Prunus persica
Psat1g131600 Pisum sativum
Psat3g071240 Pisum sativum
Psat4g016560 Pisum sativum
Psat5g058520 Pisum sativum
Psat6g231160 Pisum sativum
Psat7g188200 Pisum sativum
PSO063G6290 Papaver somniferum
PSO339G2319 Papaver somniferum
PSO339G3612 Papaver somniferum
PSO384G0634 Papaver somniferum
PSO384G4358 Papaver somniferum
PSO832G2316 Papaver somniferum
QL01p012370 Quercus lobata
QL02p061858 Quercus lobata
QL04p045985 Quercus lobata
RcHm_v2.0_Chr2g0094041 Rosa chinensis
RcHm_v2.0_Chr5g0044401 Rosa chinensis
Rhsim03G0098300 Rhododendron simsii
Rhsim05G0014700 Rhododendron simsii
Rhsim09G0142200 Rhododendron simsii
Sabra04G0137500 Salix brachista
Sabra06G0115800 Salix brachista
Sabra08G0013800 Salix brachista
Sabra09G0128600 Salix brachista
Sabra10G0186700 Salix brachista
SalBow6G3158 Salvia bowleyana
SalBow6G3903 Salvia bowleyana
SalBow6G4596 Salvia bowleyana
Sc08g0008640 Simmondsia chinensis
Sc09g0005360 Simmondsia chinensis
Sc09g0005410 Simmondsia chinensis
Sc09g0005420 Simmondsia chinensis
Sc09g0005430 Simmondsia chinensis
Sc20g0001170 Simmondsia chinensis
Sc21g0007110 Simmondsia chinensis
Sed0000298 Sechium edule
Sed0002215 Sechium edule
Sed0008300 Sechium edule
Sed0009342 Sechium edule
Sed0010311 Sechium edule
SEGI_05695 Sequoiadendron giganteum
SEGI_06307 Sequoiadendron giganteum
SEGI_10183 Sequoiadendron giganteum
SEGI_14652 Sequoiadendron giganteum
SEGI_23188 Sequoiadendron giganteum
SEGI_24314 Sequoiadendron giganteum
SEGI_30489 Sequoiadendron giganteum
SEGI_32764 Sequoiadendron giganteum
SEGI_33437 Sequoiadendron giganteum
SEGI_37012 Sequoiadendron giganteum
SEGI_38226 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06457 Striga asiatica
SGA_v2.0_scaffold192G40631 Striga asiatica
SGA_v2.0_scaffold62G21305 Striga asiatica
SGA_v2.0_scaffold91G28066 Striga asiatica
SHI30702 Sapria himalayana
SHI30710 Sapria himalayana
SHI30711 Sapria himalayana
SHI30713 Sapria himalayana
SMO351G0648 Selaginella moellendorffii
Solyc07g040980.3 Solanum lycopersicum
Solyc11g006960.2 Solanum lycopersicum
Sopen07g020100 Solanum pennellii
Sopen11g002880 Solanum pennellii
Sp3g32770 Schrenkiella parvula
Sp6g22800 Schrenkiella parvula
Sp7g27600 Schrenkiella parvula
TAR413G0009 Trochodendron aralioides
TAR623G0506 Trochodendron aralioides
TAR626G0267 Trochodendron aralioides
TAR633G0498 Trochodendron aralioides
THA.LOC104799550 Tarenaya hassleriana
THA.LOC104799733 Tarenaya hassleriana
THA.LOC104810917 Tarenaya hassleriana
THA.LOC104814635 Tarenaya hassleriana
THA.LOC104820016 Tarenaya hassleriana
Thecc.09G083600 Theobroma cacao
Thecc.09G209200 Theobroma cacao
Thecc.09G284600 Theobroma cacao
Thecc.09G284700 Theobroma cacao
Thecc.10G112000 Theobroma cacao
Thhalv10012493m.g Eutrema salsugineum
Thhalv10022522m.g Eutrema salsugineum
Thhalv10024244m.g Eutrema salsugineum
TPR.G17221 Trifolium pratense
TPR.G18103 Trifolium pratense
TPR.G2484 Trifolium pratense
TPR.G8069 Trifolium pratense
TPR.G9459 Trifolium pratense
TWI31G0247 Tripterygium wilfordii
TWI32G1015 Tripterygium wilfordii
TWI38G1645 Tripterygium wilfordii
TWI63G0274 Tripterygium wilfordii
TWI63G1473 Tripterygium wilfordii
TWI79G0678 Tripterygium wilfordii
TWI79G1302 Tripterygium wilfordii
TWI79G1571 Tripterygium wilfordii
unitig_37.g12348 Utricularia gibba
unitig_46.g18637 Utricularia gibba
vmacro10307 Vaccinium macrocarpon
vmacro17161 Vaccinium macrocarpon
VMungo0720G0434 Vigna mungo
VMungo1127G2223 Vigna mungo
VMungo1215G1996 Vigna mungo
VMungo1309G1942 Vigna mungo
Zm00001eb141460 Zea mays
Zm00001eb267350 Zea mays
Zm00001eb356080 Zea mays

User provided reference genes

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