Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25980 Brassica napus
A02p07300 Brassica napus
A03p00460 Brassica napus
A03p11840 Brassica napus
A04p04330 Brassica napus
A04p30220 Brassica napus
A05p06550 Brassica napus
A06p20670 Brassica napus
A09p48650 Brassica napus
A10p16390 Brassica napus
A10p33540 Brassica napus
Aa31LG1G11770 Aethionema arabicum
Aa31LG1G22680 Aethionema arabicum
Aa31LG4G15810 Aethionema arabicum
Actinidia01131 Actinidia chinensis
Actinidia02381 Actinidia chinensis
Actinidia02902 Actinidia chinensis
Actinidia05333 Actinidia chinensis
Actinidia13817 Actinidia chinensis
Actinidia29166 Actinidia chinensis
Actinidia34435 Actinidia chinensis
AL4G37420 Arabidopsis lyrata
AL5G25910 Arabidopsis lyrata
AL5G36870 Arabidopsis lyrata
AL6G11220 Arabidopsis lyrata
AL8G35630 Arabidopsis lyrata
Aqoxy1G00796 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1EL8LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6AC8VA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9SAY5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DI08LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FAEJ2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6Z8IZ Arachis hypogaea
AT2G39855 Arabidopsis thaliana
AT3G46880 Arabidopsis thaliana
AT3G55646 Arabidopsis thaliana
AT5G02020 Arabidopsis thaliana
AT5G59080 Arabidopsis thaliana
Atru.chr12.267 Acer truncatum
Atru.chr3.4029 Acer truncatum
Atru.chr8.2091 Acer truncatum
AUR62001723 Chenopodium quinoa
AUR62020062 Chenopodium quinoa
BcaB01g00071 Brassica carinata
BcaB01g00963 Brassica carinata
BcaB01g04602 Brassica carinata
BcaB02g08404 Brassica carinata
BcaB02g09077 Brassica carinata
BcaB02g09078 Brassica carinata
BcaB02g09079 Brassica carinata
BcaB05g22486 Brassica carinata
BcaB05g22543 Brassica carinata
BcaB05g23521 Brassica carinata
BcaB05g23523 Brassica carinata
BcaB08g36279 Brassica carinata
BcaC01g01877 Brassica carinata
BcaC02g09782 Brassica carinata
BcaC02g12118 Brassica carinata
BcaC03g14033 Brassica carinata
BcaC04g19809 Brassica carinata
BcaC07g39895 Brassica carinata
BcaNung02754 Brassica carinata
BcaNung04459 Brassica carinata
BcaNung05702 Brassica carinata
BcaNung05703 Brassica carinata
BcaNung07238 Brassica carinata
BolC2t07370H Brassica oleracea
BolC3t12637H Brassica oleracea
BolC3t13837H Brassica oleracea
BolC3t19385H Brassica oleracea
BolC4t22381H Brassica oleracea
BolC4t25129H Brassica oleracea
BolC4t28263H Brassica oleracea
BolC8t50722H Brassica oleracea
BolC9t58006H Brassica oleracea
BolC9t60178H Brassica oleracea
BraA01t02517Z Brassica rapa
BraA02t05810Z Brassica rapa
BraA03t09436Z Brassica rapa
BraA03t10495Z Brassica rapa
BraA04t16144Z Brassica rapa
BraA04t18486Z Brassica rapa
BraA05t19624Z Brassica rapa
BraA06t25145Z Brassica rapa
BraA09t40317Z Brassica rapa
BraA10t43726Z Brassica rapa
BraA10t45384Z Brassica rapa
C02p12720 Brassica napus
C03p00740 Brassica napus
C03p13900 Brassica napus
C04p07650 Brassica napus
C04p36660 Brassica napus
C04p67640 Brassica napus
C08p30990 Brassica napus
C09p51470 Brassica napus
C09p74450 Brassica napus
CAN.G394.83 Capsicum annuum
CAN.G945.14 Capsicum annuum
CANSAT35G0720 Cannabis sativa
CANSAT54G2006 Cannabis sativa
CANSAT56G2845 Cannabis sativa
CARHR134770 Cardamine hirsuta
CARHR155500 Cardamine hirsuta
CARHR165710 Cardamine hirsuta
CARHR211340 Cardamine hirsuta
CARHR285550 Cardamine hirsuta
Carub.0004s2198 Capsella rubella
Carub.0005s1310 Capsella rubella
Carub.0005s2241 Capsella rubella
Carub.0006s0087 Capsella rubella
Carub.0008s1987 Capsella rubella
Ca_05913_v3 Cicer arietinum L.
Ca_07570_v3 Cicer arietinum L.
Ca_25867_v3 Cicer arietinum L.
Ca_25868_v3 Cicer arietinum L.
Cc01_g13520 Coffea canephora
Cc02_g07230 Coffea canephora
Cc06_g02060 Coffea canephora
CDE03G0247 Ceratophyllum demersum
CDE04G3048 Ceratophyllum demersum
Cfa011585 Carpinus fangiana
Cfa017303 Carpinus fangiana
Ciclev10013013m.g Citrus clementina
Ciclev10029407m.g Citrus clementina
Ciclev10033996m.g Citrus clementina
CiPaw.01G293300 Carya illinoinensis
CiPaw.02G188100 Carya illinoinensis
CiPaw.09G201400 Carya illinoinensis
CiPaw.10G149400 Carya illinoinensis
CiPaw.13G087300 Carya illinoinensis
CiPaw.14G063800 Carya illinoinensis
ClCG03G001170 Citrullus lanatus
ClCG04G007570 Citrullus lanatus
ClCG07G003740 Citrullus lanatus
ClCG10G021550 Citrullus lanatus
COL.COLO4_14694 Corchorus olitorius
COL.COLO4_18603 Corchorus olitorius
COL.COLO4_25564 Corchorus olitorius
Cpa.g.sc19.255 Carica papaya
Cpa.g.sc56.61 Carica papaya
Cpa.g.sc81.54 Carica papaya
CsaV3_1G034620 Cucumis sativus L.
CsaV3_1G035720 Cucumis sativus L.
CsaV3_3G034460 Cucumis sativus L.
CsaV3_4G025610 Cucumis sativus L.
CsaV3_5G008550 Cucumis sativus L.
CSS0002888 Camellia sinensis var. sinensis
CSS0007705 Camellia sinensis var. sinensis
CSS0026065 Camellia sinensis var. sinensis
CSS0026922 Camellia sinensis var. sinensis
CSS0044115 Camellia sinensis var. sinensis
DCAR_007418 Daucus carota
DCAR_010425 Daucus carota
DCAR_011755 Daucus carota
DCAR_024854 Daucus carota
DCAR_027565 Daucus carota
Dinv16275 Davidia involucrata
Dinv17065 Davidia involucrata
Dinv34453 Davidia involucrata
Dinv35541 Davidia involucrata
Dinv37114 Davidia involucrata
Dinv43009 Davidia involucrata
Dinv43088 Davidia involucrata
Duzib025G0001 Durio zibethinus
Duzib093G1451 Durio zibethinus
Duzib106G0892 Durio zibethinus
Duzib106G1514 Durio zibethinus
Duzib106G1527 Durio zibethinus
Duzib106G1623 Durio zibethinus
Duzib106G2001 Durio zibethinus
Duzib114G0853 Durio zibethinus
Duzib150G0778 Durio zibethinus
Duzib168G0381 Durio zibethinus
Duzib170G0250 Durio zibethinus
Duzib241G0001 Durio zibethinus
ECA232G2252 Erigeron canadensis
ECA236G4479 Erigeron canadensis
ECA238G2806 Erigeron canadensis
ECA247G1674 Erigeron canadensis
ECA248G3824 Erigeron canadensis
EL10Ac2g04671 Beta vulgaris
EL10Ac7g16089 Beta vulgaris
Eucgr.B02296 Eucalyptus grandis
Eucgr.J00967 Eucalyptus grandis
Eucgr.K03042 Eucalyptus grandis
FAN02G1653 Fragaria x ananassa
FAN05G5243 Fragaria x ananassa
FAN06G0722 Fragaria x ananassa
FAN09G2315 Fragaria x ananassa
FAN11G0374 Fragaria x ananassa
FAN14G0695 Fragaria x ananassa
FAN16G2865 Fragaria x ananassa
FAN21G1105 Fragaria x ananassa
FAN25G3555 Fragaria x ananassa
FvH4_3g37190 Fragaria vesca
FvH4_6g12720 Fragaria vesca
FvH4_7g23590 Fragaria vesca
Glyma.01G105600 Glycine max
Glyma.02G252500 Glycine max
Glyma.03G073400 Glycine max
Glyma.07G139300 Glycine max
Glyma.11G224800 Glycine max
Glyma.14G064100 Glycine max
Glyma.18G033302 Glycine max
Glyma.18G082600 Glycine max
Glyma.18G189900 Glycine max
Gohir.A04G059426 Gossypium hirsutum
Gohir.A04G085800 Gossypium hirsutum
Gohir.A05G092000 Gossypium hirsutum
Gohir.A05G302600 Gossypium hirsutum
Gohir.A05G314308 Gossypium hirsutum
Gohir.A05G346900 Gossypium hirsutum
Gohir.A07G101300 Gossypium hirsutum
Gohir.A08G198950 Gossypium hirsutum
Gohir.A09G160900 Gossypium hirsutum
Gohir.A10G225400 Gossypium hirsutum
Gohir.A11G328000 Gossypium hirsutum
Gohir.D04G065300 Gossypium hirsutum
Gohir.D04G125500 Gossypium hirsutum
Gohir.D05G092800 Gossypium hirsutum
Gohir.D07G105300 Gossypium hirsutum
Gohir.D09G156600 Gossypium hirsutum
Gohir.D10G238356 Gossypium hirsutum
Gohir.D11G346900 Gossypium hirsutum
Gorai.001G113400 Gossypium raimondii
Gorai.006G178100 Gossypium raimondii
Gorai.007G377300 Gossypium raimondii
Gorai.009G095400 Gossypium raimondii
Gorai.011G273400 Gossypium raimondii
Gorai.012G073500 Gossypium raimondii
Gorai.012G108600 Gossypium raimondii
GSVIVG01016436001 Vitis vinifera
GSVIVG01024854001 Vitis vinifera
GSVIVG01034066001 Vitis vinifera
HanXRQChr01g0010711 Helianthus annuus
HanXRQChr04g0125661 Helianthus annuus
HanXRQChr06g0177681 Helianthus annuus
HanXRQChr07g0202041 Helianthus annuus
HanXRQChr07g0202061 Helianthus annuus
HanXRQChr07g0202081 Helianthus annuus
HanXRQChr07g0202091 Helianthus annuus
HanXRQChr09g0246971 Helianthus annuus
HanXRQChr11g0339161 Helianthus annuus
HanXRQChr14g0458451 Helianthus annuus
Haze_17151 Corylus avellana
Haze_20884 Corylus avellana
Haze_20893 Corylus avellana
Haze_24203 Corylus avellana
Hma1.2p1_0026F.1_g016620 Hydrangea macrophylla
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla
Hma1.2p1_1521F.1_g288640 Hydrangea macrophylla
HPP92_015502 Vanilla planifolia
HPP92_018161 Vanilla planifolia
HPP92_018174 Vanilla planifolia
Hund04907 Selenicereus undatus
Hund16038 Selenicereus undatus
Lalb_Chr01g0022791 Lupinus albus
Lalb_Chr07g0193261 Lupinus albus
Lalb_Chr10g0104861 Lupinus albus
Lalb_Chr15g0084471 Lupinus albus
Lalb_Chr18g0052921 Lupinus albus
Lalb_Chr19g0125021 Lupinus albus
Lj1A144T52 Lonicera japonica
Lj1A944G61 Lonicera japonica
Lj1A946T36 Lonicera japonica
Lj1g0006352 Lotus japonicus
Lj3g0027625 Lotus japonicus
Lj3P960T16 Lonicera japonica
Lj6g0014007 Lotus japonicus
LjContig00141g0012501 Lotus japonicus
LjContig00141g0025360 Lotus japonicus
Lsat_1_v5_gn_2_117121 Lactuca sativa
Lsat_1_v5_gn_5_169880 Lactuca sativa
Lsat_1_v5_gn_9_62940 Lactuca sativa
Manes.02G126600 Manihot esculenta
Manes.07G122500 Manihot esculenta
Manes.08G082200 Manihot esculenta
Manes.09G098500 Manihot esculenta
Manes.10G021200 Manihot esculenta
MBI05_g02668_MAGBIO Magnolia biondii
MBI14_g02863_MAGBIO Magnolia biondii
MD01G1141700 Malus domestica
MD03G1083100 Malus domestica
MD04G1139000 Malus domestica
MD06G1121300 Malus domestica
MD07G1207300 Malus domestica
MD11G1091200 Malus domestica
MD12G1154800 Malus domestica
Medtr3g069570 Medicago truncatula
Medtr4g019690 Medicago truncatula
Medtr4g019710 Medicago truncatula
Medtr4g034060 Medicago truncatula
Medtr4g034100 Medicago truncatula
Medtr5g011930 Medicago truncatula
Medtr5g012280 Medicago truncatula
Medtr5g081360 Medicago truncatula
Medtr7g065150 Medicago truncatula
MELO3C003186.2 Cucumis melo
MELO3C009217.2 Cucumis melo
MELO3C020597.2 Cucumis melo
MELO3C026564.2 Cucumis melo
Migut.F01302 Erythranthe guttata
Migut.J00263 Erythranthe guttata
Migut.L01972 Erythranthe guttata
MSTRG.10242 Avicennia marina
MSTRG.19051 Avicennia marina
MSTRG.5625 Avicennia marina
MSTRG.8288 Avicennia marina
Nitab4.5_0000008g0010 Nicotiana tabacum
Nitab4.5_0000647g0040 Nicotiana tabacum
Nitab4.5_0000647g0050 Nicotiana tabacum
Nitab4.5_0000839g0160 Nicotiana tabacum
Nitab4.5_0002822g0010 Nicotiana tabacum
Nitab4.5_0006055g0060 Nicotiana tabacum
Nitab4.5_0006222g0010 Nicotiana tabacum
Nitab4.5_0006999g0040 Nicotiana tabacum
Nitab4.5_0008180g0080 Nicotiana tabacum
Nn2g11290 Nelumbo nucifera
Nn2g13529 Nelumbo nucifera
Oeu013160.1 Olea europaea
Oeu018329.3 Olea europaea
Oeu030548.1 Olea europaea
Oeu045833.1 Olea europaea
Oeu053786.1 Olea europaea
Peaxi162Scf00140g01313 Petunia axillaris
Peaxi162Scf00164g01525 Petunia axillaris
Peaxi162Scf00481g00623 Petunia axillaris
Peaxi162Scf00975g10014 Petunia axillaris
PGR031G1360 Punica granatum
PGR044G2554 Punica granatum
PGR102G2576 Punica granatum
PGSC0003DMG400002161 Solanum tuberosum
PGSC0003DMG400027191 Solanum tuberosum
PGSC0003DMG400030335 Solanum tuberosum
Phvul.001G238300 Phaseolus vulgaris
Phvul.008G114000 Phaseolus vulgaris
Phvul.010G005600 Phaseolus vulgaris
Potri.006G092400 Populus trichocarpa
Potri.008G061700 Populus trichocarpa
Potri.009G038300 Populus trichocarpa
Potri.010G196400 Populus trichocarpa
Prupe.2G242500 Prunus persica
Prupe.6G067400 Prunus persica
Prupe.6G264600 Prunus persica
Psat0s558g0040 Pisum sativum
Psat2g037000 Pisum sativum
Psat5g124880 Pisum sativum
Psat7g240840 Pisum sativum
Psat7g241240 Pisum sativum
PSO339G5793 Papaver somniferum
PSO384G0699 Papaver somniferum
QL01p028214 Quercus lobata
QL07p028303 Quercus lobata
QL08p062024 Quercus lobata
RcHm_v2.0_Chr3g0464641 Rosa chinensis
RcHm_v2.0_Chr5g0066931 Rosa chinensis
Rhsim01G0233300 Rhododendron simsii
Rhsim03G0137600 Rhododendron simsii
Rhsim04G0163100 Rhododendron simsii
Sabra06G0070100 Salix brachista
Sabra08G0045300 Salix brachista
Sabra09G0027300 Salix brachista
Sabra10G0151000 Salix brachista
SalBow4G3124 Salvia bowleyana
Sc10g0001920 Simmondsia chinensis
Sc11g0007610 Simmondsia chinensis
Sc21g0006110 Simmondsia chinensis
Sed0002411 Sechium edule
Sed0003709 Sechium edule
Sed0005026 Sechium edule
Sed0008803 Sechium edule
Sed0014683 Sechium edule
Sed0022748 Sechium edule
SEGI_18129 Sequoiadendron giganteum
SGA_v2.0_scaffold673G53428 Striga asiatica
SHI12735 Sapria himalayana
Solyc05g052880.4 Solanum lycopersicum
Solyc05g052890.3 Solanum lycopersicum
Solyc06g076470.3 Solanum lycopersicum
Solyc09g011470.3 Solanum lycopersicum
Sopen05g031390 Solanum pennellii
Sopen05g031400 Solanum pennellii
Sopen06g032880 Solanum pennellii
Sopen09g006220 Solanum pennellii
Sp4g22150 Schrenkiella parvula
Sp5g06820 Schrenkiella parvula
Sp5g14870 Schrenkiella parvula
Sp6g20900 Schrenkiella parvula
Sp6g40420 Schrenkiella parvula
TAR369G0036 Trochodendron aralioides
TAR376G1061 Trochodendron aralioides
TAR623G0111 Trochodendron aralioides
TAR623G0264 Trochodendron aralioides
TAR636G3077 Trochodendron aralioides
THA.LOC104810063 Tarenaya hassleriana
THA.LOC104810744 Tarenaya hassleriana
THA.LOC104814892 Tarenaya hassleriana
THA.LOC104816242 Tarenaya hassleriana
THA.LOC104816574 Tarenaya hassleriana
THA.LOC104823267 Tarenaya hassleriana
THA.LOC104823400 Tarenaya hassleriana
THA.LOC104827030 Tarenaya hassleriana
Thecc.05G028900 Theobroma cacao
Thecc.09G312500 Theobroma cacao
Thecc.10G031300 Theobroma cacao
Thhalv10010805m.g Eutrema salsugineum
Thhalv10010907m.g Eutrema salsugineum
Thhalv10014930m.g Eutrema salsugineum
Thhalv10014998m.g Eutrema salsugineum
Thhalv10017636m.g Eutrema salsugineum
TPR.G25823 Trifolium pratense
TPR.G32538 Trifolium pratense
TPR.G32550 Trifolium pratense
TPR.G33721 Trifolium pratense
TPR.G34922 Trifolium pratense
TPR.G471 Trifolium pratense
TWI15G0258 Tripterygium wilfordii
TWI31G0608 Tripterygium wilfordii
TWI53G1409 Tripterygium wilfordii
TWI56G1206 Tripterygium wilfordii
TWI74G0174 Tripterygium wilfordii
TWI77G0582 Tripterygium wilfordii
unitig_22.g6580 Utricularia gibba
unitig_578.g15883 Utricularia gibba
unitig_744.g24620 Utricularia gibba
unitig_8.g3237 Utricularia gibba
vmacro07015 Vaccinium macrocarpon
vmacro14565 Vaccinium macrocarpon
vmacro19559 Vaccinium macrocarpon
vmacro20196 Vaccinium macrocarpon
VMungo0331G1830 Vigna mungo
VMungo1383G2188 Vigna mungo
VMungo1383G3326 Vigna mungo

User provided reference genes

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