Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09910 Brassica napus
A02p09920 Brassica napus
A03p14280 Brassica napus
A03p14290 Brassica napus
A08p33200 Brassica napus
A10p12360 Brassica napus
Aa31LG3G10990 Aethionema arabicum
Aa31LG3G11000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.937 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3056 Anthoceros agrestis
Actinidia05081 Actinidia chinensis
Actinidia05085 Actinidia chinensis
Actinidia08339 Actinidia chinensis
Actinidia08340 Actinidia chinensis
Actinidia08342 Actinidia chinensis
Actinidia10741 Actinidia chinensis
Actinidia11862 Actinidia chinensis
Actinidia32254 Actinidia chinensis
Actinidia32255 Actinidia chinensis
Ah.04g166010 Amaranthus hybridus
Ah.04g166020 Amaranthus hybridus
Ah.06g182830 Amaranthus hybridus
Ah.09g234730 Amaranthus hybridus
Ah.14g087940 Amaranthus hybridus
AL7G25940 Arabidopsis lyrata
AL8G30560 Arabidopsis lyrata
AL8G30570 Arabidopsis lyrata
AL989U10010 Arabidopsis lyrata
Aqoxy144s006 Aquilegia oxysepala
Aqoxy1G03123 Aquilegia oxysepala
Aqoxy2G01463 Aquilegia oxysepala
Aqoxy3G00551 Aquilegia oxysepala
Aqoxy435s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09LR4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0NM8ER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0VB874 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3R1ZZ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4VZL46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AJ719V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0VZGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF778S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFUU5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QYLL7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ1JUI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U00TZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZH1XWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI8W5L Arachis hypogaea
AT4G26910 Arabidopsis thaliana
AT5G55060 Arabidopsis thaliana
AT5G55070 Arabidopsis thaliana
ATR0210G016 Amborella trichopoda
ATR0794G053 Amborella trichopoda
Atru.chr2.3466 Acer truncatum
Atru.chr2.3467 Acer truncatum
Atru.chr2.3480 Acer truncatum
Atru.chr2.3482 Acer truncatum
Atru.chr6.3210 Acer truncatum
AUR62012728 Chenopodium quinoa
AUR62015810 Chenopodium quinoa
AUR62020408 Chenopodium quinoa
AUR62021926 Chenopodium quinoa
BcaB03g13226 Brassica carinata
BcaB04g19757 Brassica carinata
BcaB05g22177 Brassica carinata
BcaB08g35869 Brassica carinata
BcaB08g35870 Brassica carinata
BcaC01g06340 Brassica carinata
BcaC01g06341 Brassica carinata
BcaC03g14270 Brassica carinata
BcaC03g14273 Brassica carinata
BcaC04g20272 Brassica carinata
BcaC04g20273 Brassica carinata
BolC2t07747H Brassica oleracea
BolC2t07748H Brassica oleracea
BolC3t14086H Brassica oleracea
BolC3t14087H Brassica oleracea
BolC8t49128H Brassica oleracea
BolC9t57432H Brassica oleracea
BraA02t06055Z Brassica rapa
BraA02t06056Z Brassica rapa
BraA03t10725Z Brassica rapa
BraA03t10726Z Brassica rapa
BraA08t35238Z Brassica rapa
BraA10t43329Z Brassica rapa
BraA10t43330Z Brassica rapa
C02p16470 Brassica napus
C03p16670 Brassica napus
C08p14980 Brassica napus
C09p45620 Brassica napus
C09p45930 Brassica napus
CAN.G1708.1 Capsicum annuum
CAN.G337.74 Capsicum annuum
CAN.G337.77 Capsicum annuum
CANSAT11G2014 Cannabis sativa
CANSAT11G2500 Cannabis sativa
CANSAT25G2644 Cannabis sativa
CARHR012180 Cardamine hirsuta
CARHR234520 Cardamine hirsuta
CARHR268410 Cardamine hirsuta
CARHR268420 Cardamine hirsuta
Carub.0007s1394 Capsella rubella
Carub.0008s1533 Capsella rubella
Carub.0008s1535 Capsella rubella
Ca_06331_v3 Cicer arietinum L.
Ca_06334_v3 Cicer arietinum L.
Ca_14751_v3 Cicer arietinum L.
Ca_30702_v3 Cicer arietinum L.
Ca_30705_v3 Cicer arietinum L.
CBR_g40253 Chara braunii
CBR_g52387 Chara braunii
Cc05_g13980 Coffea canephora
CDE05G0246 Ceratophyllum demersum
CDE05G0747 Ceratophyllum demersum
CDE05G2089 Ceratophyllum demersum
Cfa020319 Carpinus fangiana
Ciclev10007601m.g Citrus clementina
Ciclev10008189m.g Citrus clementina
Ciclev10017966m.g Citrus clementina
CiPaw.03G158700 Carya illinoinensis
CiPaw.09G093800 Carya illinoinensis
CiPaw.11G191800 Carya illinoinensis
CiPaw.12G131400 Carya illinoinensis
ClCG09G010920 Citrullus lanatus
ClCG10G004950 Citrullus lanatus
COL.COLO4_09683 Corchorus olitorius
COL.COLO4_09686 Corchorus olitorius
COL.COLO4_31798 Corchorus olitorius
Cpa.g.sc1199.1 Carica papaya
Cpa.g.sc12.281 Carica papaya
Cre03.g185600 Chlamydomonas reinhardtii
Cre07.g343433 Chlamydomonas reinhardtii
Cre07.g343700 Chlamydomonas reinhardtii
CsaV3_3G004600 Cucumis sativus L.
CsaV3_7G021930 Cucumis sativus L.
CSS0005167 Camellia sinensis var. sinensis
CSS0007092 Camellia sinensis var. sinensis
CSS0007592 Camellia sinensis var. sinensis
CSS0024501 Camellia sinensis var. sinensis
CSS0038125 Camellia sinensis var. sinensis
CSS0042338 Camellia sinensis var. sinensis
CSS0045424 Camellia sinensis var. sinensis
DCAR_016715 Daucus carota
DCAR_016716 Daucus carota
DCAR_022577 Daucus carota
DCAR_024929 Daucus carota
DCAR_024930 Daucus carota
Dinv00070 Davidia involucrata
Dinv13914 Davidia involucrata
Dinv22250 Davidia involucrata
Dinv40771 Davidia involucrata
Dinv40774 Davidia involucrata
Duzib170G0627 Durio zibethinus
Duzib170G0644 Durio zibethinus
Duzib213G0248 Durio zibethinus
Duzib213G0923 Durio zibethinus
Duzib235G0815 Durio zibethinus
Duzib268G0560 Durio zibethinus
Duzib268G0863 Durio zibethinus
Duzib268G0865 Durio zibethinus
Duzib268G1775 Durio zibethinus
ECA234G2594 Erigeron canadensis
ECA236G1274 Erigeron canadensis
ECA236G2724 Erigeron canadensis
ECA240G2081 Erigeron canadensis
ECA246G3933 Erigeron canadensis
EL10Ac4g07774 Beta vulgaris
EL10Ac4g08761 Beta vulgaris
Eucgr.D01602 Eucalyptus grandis
Eucgr.F00743 Eucalyptus grandis
Eucgr.I00588 Eucalyptus grandis
FAN02G3746 Fragaria x ananassa
FAN05G0302 Fragaria x ananassa
FAN09G4594 Fragaria x ananassa
FAN11G2740 Fragaria x ananassa
FAN11G3048 Fragaria x ananassa
FAN14G3821 Fragaria x ananassa
FAN16G0031 Fragaria x ananassa
FAN16G1380 Fragaria x ananassa
FAN21G1927 Fragaria x ananassa
FAN21G2733 Fragaria x ananassa
FAN25G0368 Fragaria x ananassa
FAN25G2752 Fragaria x ananassa
FAN25G2755 Fragaria x ananassa
FAN25G2996 Fragaria x ananassa
FvH4_3g23020 Fragaria vesca
FvH4_3g23070 Fragaria vesca
FvH4_6g42960 Fragaria vesca
Glyma.02G292300 Glycine max
Glyma.02G292500 Glycine max
Glyma.08G319100 Glycine max
Glyma.14G022100 Glycine max
Glyma.14G022300 Glycine max
Glyma.15G187301 Glycine max
Glyma.18G094400 Glycine max
Gohir.A01G081200 Gossypium hirsutum
Gohir.A04G013700 Gossypium hirsutum
Gohir.A04G013800 Gossypium hirsutum
Gohir.A06G149300 Gossypium hirsutum
Gohir.A08G023600 Gossypium hirsutum
Gohir.D01G068300 Gossypium hirsutum
Gohir.D05G372500 Gossypium hirsutum
Gohir.D05G372600 Gossypium hirsutum
Gohir.D06G155400 Gossypium hirsutum
Gohir.D08G034100 Gossypium hirsutum
Gorai.002G090300 Gossypium raimondii
Gorai.004G031700 Gossypium raimondii
Gorai.009G440800 Gossypium raimondii
Gorai.009G441000 Gossypium raimondii
Gorai.010G181600 Gossypium raimondii
GSVIVG01012696001 Vitis vinifera
GSVIVG01037676001 Vitis vinifera
GSVIVG01037680001 Vitis vinifera
HanXRQChr03g0076381 Helianthus annuus
HanXRQChr05g0159431 Helianthus annuus
HanXRQChr11g0336391 Helianthus annuus
HanXRQChr13g0408681 Helianthus annuus
HanXRQChr16g0515491 Helianthus annuus
Haze_06822 Corylus avellana
Haze_09703 Corylus avellana
Haze_12843 Corylus avellana
Haze_26502 Corylus avellana
Haze_27584 Corylus avellana
Hma1.2p1_0235F.1_g098670 Hydrangea macrophylla
Hma1.2p1_0298F.1_g117710 Hydrangea macrophylla
Hma1.2p1_0473F.1_g160045 Hydrangea macrophylla
Hma1.2p1_1567F.1_g291085 Hydrangea macrophylla
Hma1.2p1_2633F.1_g325795 Hydrangea macrophylla
HPP92_000332 Vanilla planifolia
HPP92_003186 Vanilla planifolia
HPP92_012415 Vanilla planifolia
HPP92_028065 Vanilla planifolia
Hund01974 Selenicereus undatus
Hund01976 Selenicereus undatus
Hund23229 Selenicereus undatus
Hund23230 Selenicereus undatus
Hund23454 Selenicereus undatus
Lalb_Chr04g0248311 Lupinus albus
Lalb_Chr04g0248331 Lupinus albus
Lalb_Chr10g0107071 Lupinus albus
Lalb_Chr15g0081441 Lupinus albus
Lalb_Chr17g0348531 Lupinus albus
Lalb_Chr17g0348601 Lupinus albus
Lj1A1232T101 Lonicera japonica
Lj1A767T24 Lonicera japonica
Lj1A875G28 Lonicera japonica
Lj1C875T9 Lonicera japonica
Lj6g0020939 Lotus japonicus
LjContig00272g0017114 Lotus japonicus
LjContig00272g0017225 Lotus japonicus
Lsat_1_v5_gn_3_139140 Lactuca sativa
Lsat_1_v5_gn_4_59260 Lactuca sativa
Lsat_1_v5_gn_5_140620 Lactuca sativa
Lsat_1_v5_gn_5_2920 Lactuca sativa
Lsat_1_v5_gn_5_2940 Lactuca sativa
Lsat_1_v5_gn_7_110060 Lactuca sativa
Lsat_1_v5_gn_9_21841 Lactuca sativa
Lsat_1_v5_gn_9_93360 Lactuca sativa
Manes.03G131600 Manihot esculenta
Manes.03G131951 Manihot esculenta
Manes.13G068110 Manihot esculenta
Manes.15G069200 Manihot esculenta
Manes.15G070100 Manihot esculenta
Mapoly0014s0127 Marchantia polymorpha
Mapoly0021s0054 Marchantia polymorpha
MBI02_g25402_MAGBIO Magnolia biondii
MBI11_g08321_MAGBIO Magnolia biondii
MCO13G380 Micromonas commoda
MD03G1198100 Malus domestica
MD03G1198400 Malus domestica
MD09G1110700 Malus domestica
MD11G1214500 Malus domestica
MD17G1098600 Malus domestica
Medtr2g006820 Medicago truncatula
Medtr3g039910 Medicago truncatula
Medtr3g052790 Medicago truncatula
Medtr5g092530 Medicago truncatula
Medtr5g093230 Medicago truncatula
Medtr5g093270 Medicago truncatula
Medtr5g093300 Medicago truncatula
MELO3C013153.2 Cucumis melo
MELO3C014157.2 Cucumis melo
MELO3C016636.2 Cucumis melo
Migut.D02131 Erythranthe guttata
Migut.H01814 Erythranthe guttata
Migut.J00796 Erythranthe guttata
MSTRG.12984 Avicennia marina
MSTRG.19370 Avicennia marina
MSTRG.5941 Avicennia marina
Nitab4.5_0000168g0210 Nicotiana tabacum
Nitab4.5_0000328g0030 Nicotiana tabacum
Nitab4.5_0000328g0100 Nicotiana tabacum
Nitab4.5_0002287g0060 Nicotiana tabacum
Nitab4.5_0003450g0010 Nicotiana tabacum
Nitab4.5_0013139g0020 Nicotiana tabacum
Nn1g02453 Nelumbo nucifera
Nn1g03468 Nelumbo nucifera
Nn1g03482 Nelumbo nucifera
Nn1g07173 Nelumbo nucifera
Nn6g33840 Nelumbo nucifera
Oeu013137.1 Olea europaea
Oeu018822.1 Olea europaea
Oeu019553.1 Olea europaea
Oeu034037.1 Olea europaea
Oeu062578.1 Olea europaea
Os02g0514700 Oryza sativa ssp. japonica
Os04g0394200 Oryza sativa ssp. japonica
Os07g0511000 Oryza sativa ssp. japonica
Peaxi162Scf00235g00421 Petunia axillaris
Peaxi162Scf00235g00427 Petunia axillaris
Peaxi162Scf00660g00120 Petunia axillaris
PGR031G1078 Punica granatum
PGR031G3770 Punica granatum
PGR083G0413 Punica granatum
PGSC0003DMG400022308 Solanum tuberosum
PGSC0003DMG400022311 Solanum tuberosum
PGSC0003DMG400027873 Solanum tuberosum
Phvul.006G046200 Phaseolus vulgaris
Phvul.008G269100 Phaseolus vulgaris
Phvul.008G269300 Phaseolus vulgaris
Potri.001G357000 Populus trichocarpa
Potri.011G089200 Populus trichocarpa
Potri.011G089300 Populus trichocarpa
Potri.014G154700 Populus trichocarpa
Pp3c20_12230 Physcomitrium patens
Pp3c23_10600 Physcomitrium patens
Pp3c24_7080 Physcomitrium patens
Pp3c5_25640 Physcomitrium patens
Pp3c7_22120 Physcomitrium patens
PRCOL_00003035 Prasinoderma coloniale
PRCOL_00007277 Prasinoderma coloniale
Prupe.3G215800 Prunus persica
Prupe.4G216600 Prunus persica
Prupe.4G216900 Prunus persica
Psat0s3384g0040 Pisum sativum
Psat2g014160 Pisum sativum
Psat5g174680 Pisum sativum
PSO210G1101 Papaver somniferum
PSO541G1249 Papaver somniferum
PSO541G5896 Papaver somniferum
PSO675G5447 Papaver somniferum
PSO675G6058 Papaver somniferum
PSO675G6219 Papaver somniferum
QL05p072686 Quercus lobata
QL08p009377 Quercus lobata
QL08p009391 Quercus lobata
QL08p009425 Quercus lobata
QL08p032626 Quercus lobata
QL08p032632 Quercus lobata
QL10p053856 Quercus lobata
RcHm_v2.0_Chr2g0119431 Rosa chinensis
RcHm_v2.0_Chr2g0119441 Rosa chinensis
RcHm_v2.0_Chr2g0158941 Rosa chinensis
RcHm_v2.0_Chr5g0040501 Rosa chinensis
RcHm_v2.0_Chr5g0040581 Rosa chinensis
RcHm_v2.0_Chr5g0052431 Rosa chinensis
Rhsim04G0052700 Rhododendron simsii
Rhsim06G0219000 Rhododendron simsii
Rhsim06G0219100 Rhododendron simsii
Rhsim06G0219300 Rhododendron simsii
RhsimUnG0248900 Rhododendron simsii
Sabra11G0093800 Salix brachista
Sabra14G0117000 Salix brachista
Sabra16G0235000 Salix brachista
Sc03g0008500 Simmondsia chinensis
Sc05g0009320 Simmondsia chinensis
Sc16g0005900 Simmondsia chinensis
Sc17g0007470 Simmondsia chinensis
Sed0001205 Sechium edule
Sed0002781 Sechium edule
Sed0011428 Sechium edule
Sed0017922 Sechium edule
SEGI_06285 Sequoiadendron giganteum
SEGI_27580 Sequoiadendron giganteum
SEGI_28180 Sequoiadendron giganteum
SEGI_31863 Sequoiadendron giganteum
SEGI_32065 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31582 Striga asiatica
SGA_v2.0_scaffold133G34620 Striga asiatica
SGA_v2.0_scaffold133G34632 Striga asiatica
SGA_v2.0_scaffold250G45018 Striga asiatica
SGA_v2.0_scaffold257G45706 Striga asiatica
SGA_v2.0_scaffold62G21585 Striga asiatica
SGA_v2.0_scaffold8G04338 Striga asiatica
SMO358G0516 Selaginella moellendorffii
SMO367G0532 Selaginella moellendorffii
Solyc07g064740.3 Solanum lycopersicum
Solyc07g064800.3 Solanum lycopersicum
Solyc12g005080.2 Solanum lycopersicum
Sopen07g032940 Solanum pennellii
Sopen07g032980 Solanum pennellii
Sopen12g001080 Solanum pennellii
Sp1g10480 Schrenkiella parvula
Sp6g17000 Schrenkiella parvula
Sp6g17010 Schrenkiella parvula
Sp7g24870 Schrenkiella parvula
TAR624G0691 Trochodendron aralioides
TAR626G1039 Trochodendron aralioides
TAR627G1134 Trochodendron aralioides
TAR629G0453 Trochodendron aralioides
THA.LOC104811616 Tarenaya hassleriana
THA.LOC104811617 Tarenaya hassleriana
THA.LOC104813428 Tarenaya hassleriana
THA.LOC104817673 Tarenaya hassleriana
THA.LOC104818702 Tarenaya hassleriana
Thecc.06G223700 Theobroma cacao
Thecc.07G033000 Theobroma cacao
Thecc.07G033300 Theobroma cacao
Thhalv10007517m.g Eutrema salsugineum
Thhalv10012904m.g Eutrema salsugineum
Thhalv10013473m.g Eutrema salsugineum
Thhalv10025546m.g Eutrema salsugineum
TPR.G1213 Trifolium pratense
TPR.G1225 Trifolium pratense
TPR.G27744 Trifolium pratense
TPR.G29716 Trifolium pratense
TPR.G33786 Trifolium pratense
TPR.G36270 Trifolium pratense
TPR.G39743 Trifolium pratense
TWI18G0863 Tripterygium wilfordii
TWI36G1416 Tripterygium wilfordii
TWI38G0863 Tripterygium wilfordii
TWI39G0476 Tripterygium wilfordii
TWI75G0448 Tripterygium wilfordii
unitig_27.g24742 Utricularia gibba
unitig_578.g16279 Utricularia gibba
unitig_699.g19410 Utricularia gibba
vmacro02221 Vaccinium macrocarpon
vmacro02222 Vaccinium macrocarpon
vmacro09337 Vaccinium macrocarpon
vmacro09700 Vaccinium macrocarpon
vmacro19326 Vaccinium macrocarpon
VMungo0540G0244 Vigna mungo
VMungo0647G2168 Vigna mungo
VMungo0647G2446 Vigna mungo
Zm00001eb062650 Zea mays
Zm00001eb085130 Zea mays
Zm00001eb322480 Zea mays
Zm00001eb421290 Zea mays

User provided reference genes

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