Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16880 Brassica napus
A02p20840 Brassica napus
A03p56140 Brassica napus
A07p02310 Brassica napus
A07p28400 Brassica napus
A07p42330 Brassica napus
A08p06430 Brassica napus
A09p13900 Brassica napus
A10p09990 Brassica napus
Aa31LG2G940 Aethionema arabicum
Aa31LG3G8820 Aethionema arabicum
Aa31LG4G6760 Aethionema arabicum
Aa31LG6G10030 Aethionema arabicum
Aa31LG7G12220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1019 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3703 Anthoceros agrestis
Actinidia01995 Actinidia chinensis
Actinidia14573 Actinidia chinensis
Actinidia15535 Actinidia chinensis
Actinidia17099 Actinidia chinensis
Actinidia20876 Actinidia chinensis
Actinidia27377 Actinidia chinensis
Actinidia33747 Actinidia chinensis
Actinidia34139 Actinidia chinensis
Actinidia37288 Actinidia chinensis
Ah.07g206810 Amaranthus hybridus
AL2G11450 Arabidopsis lyrata
AL2G36800 Arabidopsis lyrata
AL7G27470 Arabidopsis lyrata
AL8G26860 Arabidopsis lyrata
Aqoxy5G00923 Aquilegia oxysepala
Aqoxy7G00282 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1R9GPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DA6R09 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7JJSM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MCT3JP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PP20A4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T53XC3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9KTGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YX38R0 Arachis hypogaea
AT1G63720 Arabidopsis thaliana
AT1G76660 Arabidopsis thaliana
AT4G25620 Arabidopsis thaliana
AT5G52430 Arabidopsis thaliana
ATR0605G096 Amborella trichopoda
ATR0680G082 Amborella trichopoda
Atru.chr1.401 Acer truncatum
Atru.chr13.14 Acer truncatum
Atru.chr9.2166 Acer truncatum
Atru.chr9.2177 Acer truncatum
Atru.chr9.2178 Acer truncatum
AUR62010701 Chenopodium quinoa
AUR62017184 Chenopodium quinoa
AUR62031387 Chenopodium quinoa
AUR62035194 Chenopodium quinoa
AUR62042531 Chenopodium quinoa
BcaB02g07072 Brassica carinata
BcaB04g17616 Brassica carinata
BcaB05g25003 Brassica carinata
BcaB07g31555 Brassica carinata
BcaC03g15694 Brassica carinata
BcaC04g20588 Brassica carinata
BcaC04g22686 Brassica carinata
BcaC04g22689 Brassica carinata
BcaC06g32793 Brassica carinata
BcaC06g32795 Brassica carinata
BcaC06g36408 Brassica carinata
BcaC07g37306 Brassica carinata
BcaC08g45514 Brassica carinata
BcaC08g47178 Brassica carinata
BcaC08g47224 Brassica carinata
BcaC09g50752 Brassica carinata
BcaC09g50753 Brassica carinata
BcaNung03704 Brassica carinata
BolC1t02040H Brassica oleracea
BolC2t08107H Brassica oleracea
BolC2t09415H Brassica oleracea
BolC6t38312H Brassica oleracea
BolC6t40116H Brassica oleracea
BolC7t45932H Brassica oleracea
BolC9t54566H Brassica oleracea
BolC9t57064H Brassica oleracea
BraA01t01641Z Brassica rapa
BraA02t07115Z Brassica rapa
BraA03t14687Z Brassica rapa
BraA08t32652Z Brassica rapa
BraA09t37037Z Brassica rapa
BraA10t43082Z Brassica rapa
C01p21160 Brassica napus
C02p19720 Brassica napus
C02p32830 Brassica napus
C06p31860 Brassica napus
C06p50900 Brassica napus
C07p54470 Brassica napus
C08p07410 Brassica napus
C09p16630 Brassica napus
C09p41770 Brassica napus
CAN.G208.44 Capsicum annuum
CAN.G236.13 Capsicum annuum
CAN.G774.59 Capsicum annuum
CANSAT21G1183 Cannabis sativa
CANSAT21G1777 Cannabis sativa
CANSAT25G1227 Cannabis sativa
CARHR035270 Cardamine hirsuta
CARHR047610 Cardamine hirsuta
CARHR070220 Cardamine hirsuta
CARHR233040 Cardamine hirsuta
CARHR265420 Cardamine hirsuta
Carub.0001s3442 Capsella rubella
Carub.0002s0112 Capsella rubella
Carub.0002s2356 Capsella rubella
Carub.0007s1536 Capsella rubella
Carub.0008s1253 Capsella rubella
Ca_13496_v3 Cicer arietinum L.
Ca_17518_v3 Cicer arietinum L.
Ca_25272_v3 Cicer arietinum L.
Ca_25395_v3 Cicer arietinum L.
Ca_29982_v3 Cicer arietinum L.
Ca_31148_v3 Cicer arietinum L.
Cc02_g02600 Coffea canephora
Cc08_g14900 Coffea canephora
Cc10_g12820 Coffea canephora
CDE02G1442 Ceratophyllum demersum
CDE02G3013 Ceratophyllum demersum
CDE04G1810 Ceratophyllum demersum
CDE05G2684 Ceratophyllum demersum
CDE06G2771 Ceratophyllum demersum
CDE08G0201 Ceratophyllum demersum
CDE09G0894 Ceratophyllum demersum
Cfa012210 Carpinus fangiana
Cfa014174 Carpinus fangiana
Ciclev10000992m.g Citrus clementina
Ciclev10004813m.g Citrus clementina
Ciclev10020073m.g Citrus clementina
CiPaw.05G263700 Carya illinoinensis
CiPaw.07G129600 Carya illinoinensis
CiPaw.11G133500 Carya illinoinensis
CiPaw.12G091800 Carya illinoinensis
ClCG05G008220 Citrullus lanatus
ClCG07G008110 Citrullus lanatus
ClCG11G019210 Citrullus lanatus
COL.COLO4_16218 Corchorus olitorius
COL.COLO4_28027 Corchorus olitorius
Cpa.g.sc107.82 Carica papaya
Cpa.g.sc214.15 Carica papaya
Cpa.g.sc36.87 Carica papaya
CsaV3_3G017300 Cucumis sativus L.
CsaV3_4G005930 Cucumis sativus L.
CsaV3_4G037810 Cucumis sativus L.
CSS0008953 Camellia sinensis var. sinensis
CSS0031824 Camellia sinensis var. sinensis
CSS0033283 Camellia sinensis var. sinensis
CSS0043814 Camellia sinensis var. sinensis
CSS0049224 Camellia sinensis var. sinensis
DCAR_000624 Daucus carota
DCAR_008374 Daucus carota
DCAR_009378 Daucus carota
DCAR_010292 Daucus carota
DCAR_023010 Daucus carota
Dinv05520 Davidia involucrata
Dinv35231 Davidia involucrata
Dinv37626 Davidia involucrata
Duzib041G0466 Durio zibethinus
Duzib084G0156 Durio zibethinus
Duzib084G1261 Durio zibethinus
Duzib093G1659 Durio zibethinus
Duzib205G0705 Durio zibethinus
Duzib205G0856 Durio zibethinus
ECA232G2658 Erigeron canadensis
ECA233G1562 Erigeron canadensis
EL10Ac1g01747 Beta vulgaris
EL10Ac3g05592 Beta vulgaris
EL10Ac5g12794 Beta vulgaris
Eucgr.A02759 Eucalyptus grandis
Eucgr.E00630 Eucalyptus grandis
Eucgr.F01956 Eucalyptus grandis
Eucgr.F03634 Eucalyptus grandis
Eucgr.K00281 Eucalyptus grandis
FAN01G0789 Fragaria x ananassa
FAN03G0914 Fragaria x ananassa
FAN03G2623 Fragaria x ananassa
FAN04G0129 Fragaria x ananassa
FAN04G0393 Fragaria x ananassa
FAN06G3266 Fragaria x ananassa
FAN06G4096 Fragaria x ananassa
FAN08G2265 Fragaria x ananassa
FAN08G3288 Fragaria x ananassa
FAN10G0998 Fragaria x ananassa
FAN10G2659 Fragaria x ananassa
FAN13G1800 Fragaria x ananassa
FAN13G3231 Fragaria x ananassa
FAN18G1195 Fragaria x ananassa
FAN18G3491 Fragaria x ananassa
FAN28G1413 Fragaria x ananassa
FvH4_5g02720 Fragaria vesca
FvH4_5g26800 Fragaria vesca
FvH4_7g29970 Fragaria vesca
Glyma.01G220800 Glycine max
Glyma.05G209100 Glycine max
Glyma.08G015800 Glycine max
Glyma.09G134700 Glycine max
Glyma.10G232500 Glycine max
Glyma.11G022800 Glycine max
Glyma.14G224200 Glycine max
Glyma.16G180600 Glycine max
Glyma.17G262500 Glycine max
Gohir.A01G101200 Gossypium hirsutum
Gohir.A03G018600 Gossypium hirsutum
Gohir.A09G181700 Gossypium hirsutum
Gohir.A12G230500 Gossypium hirsutum
Gohir.A12G255900 Gossypium hirsutum
Gohir.D01G086100 Gossypium hirsutum
Gohir.D03G150300 Gossypium hirsutum
Gohir.D09G176400 Gossypium hirsutum
Gohir.D12G231600 Gossypium hirsutum
Gohir.D12G257300 Gossypium hirsutum
Gorai.002G111500 Gossypium raimondii
Gorai.003G157500 Gossypium raimondii
Gorai.006G198500 Gossypium raimondii
Gorai.008G247900 Gossypium raimondii
Gorai.008G275500 Gossypium raimondii
GSVIVG01013469001 Vitis vinifera
GSVIVG01013470001 Vitis vinifera
GSVIVG01019732001 Vitis vinifera
GSVIVG01028895001 Vitis vinifera
HanXRQChr03g0086861 Helianthus annuus
HanXRQChr07g0204331 Helianthus annuus
HanXRQChr08g0217031 Helianthus annuus
HanXRQChr13g0394531 Helianthus annuus
HanXRQChr13g0416321 Helianthus annuus
HanXRQChr15g0494031 Helianthus annuus
Haze_00020 Corylus avellana
Haze_08800 Corylus avellana
Haze_22898 Corylus avellana
Hma1.2p1_0227F.1_g096030 Hydrangea macrophylla
Hma1.2p1_1123F.1_g259470 Hydrangea macrophylla
HPP92_003366 Vanilla planifolia
HPP92_019648 Vanilla planifolia
Hund04772 Selenicereus undatus
Hund05062 Selenicereus undatus
Hund11731 Selenicereus undatus
Hund14824 Selenicereus undatus
Lalb_Chr01g0008241 Lupinus albus
Lalb_Chr03g0033731 Lupinus albus
Lalb_Chr03g0034751 Lupinus albus
Lalb_Chr05g0224681 Lupinus albus
Lalb_Chr19g0130711 Lupinus albus
Lalb_Chr19g0131801 Lupinus albus
Lalb_Chr19g0131811 Lupinus albus
Lj1P1002T16 Lonicera japonica
Lj2g0001790 Lotus japonicus
Lj2P183T14 Lonicera japonica
Lj4A814T58 Lonicera japonica
Lj4g0009011 Lotus japonicus
Lj5g0008855 Lotus japonicus
Lj8P219T27 Lonicera japonica
Lsat_1_v5_gn_6_5500 Lactuca sativa
Lsat_1_v5_gn_6_86440 Lactuca sativa
Lsat_1_v5_gn_8_25641 Lactuca sativa
Lsat_1_v5_gn_9_55221 Lactuca sativa
Manes.01G059900 Manihot esculenta
Manes.02G020800 Manihot esculenta
Manes.05G113447 Manihot esculenta
Manes.06G150800 Manihot esculenta
Manes.14G024200 Manihot esculenta
Manes.18G000200 Manihot esculenta
Mapoly0014s0222 Marchantia polymorpha
MBI01_g32853_MAGBIO Magnolia biondii
MBI18_g02844_MAGBIO Magnolia biondii
MD00G1147000 Malus domestica
MD01G1205800 Malus domestica
MD06G1086300 Malus domestica
MD14G1107500 Malus domestica
MD16G1282800 Malus domestica
Medtr1g026560 Medicago truncatula
Medtr6g045493 Medicago truncatula
Medtr8g098495 Medicago truncatula
MELO3C006927.2 Cucumis melo
MELO3C016355.2 Cucumis melo
MELO3C017075.2 Cucumis melo
Migut.C00152 Erythranthe guttata
Migut.E01081 Erythranthe guttata
Migut.F01098 Erythranthe guttata
Migut.N02944 Erythranthe guttata
MSTRG.13847 Avicennia marina
MSTRG.1859 Avicennia marina
MSTRG.24937 Avicennia marina
MSTRG.79 Avicennia marina
MSTRG.8470 Avicennia marina
MSTRG.8723 Avicennia marina
MSTRG.970 Avicennia marina
Nitab4.5_0000084g0280 Nicotiana tabacum
Nitab4.5_0001309g0130 Nicotiana tabacum
Nitab4.5_0001615g0020 Nicotiana tabacum
Nitab4.5_0001625g0020 Nicotiana tabacum
Nitab4.5_0002975g0040 Nicotiana tabacum
Nitab4.5_0003423g0050 Nicotiana tabacum
Nn1g01557 Nelumbo nucifera
Nn5g31094 Nelumbo nucifera
Nn6g33387 Nelumbo nucifera
Oeu004117.1 Olea europaea
Oeu016792.1 Olea europaea
Oeu028572.1 Olea europaea
Oeu036722.1 Olea europaea
Oeu045385.1 Olea europaea
Oeu046068.1 Olea europaea
Oeu061376.1 Olea europaea
Oeu061451.1 Olea europaea
Os01g0103800 Oryza sativa ssp. japonica
Os02g0822000 Oryza sativa ssp. japonica
Peaxi162Scf00057g00317 Petunia axillaris
Peaxi162Scf00064g01427 Petunia axillaris
Peaxi162Scf00102g00164 Petunia axillaris
Peaxi162Scf00119g00137 Petunia axillaris
PGR031G2421 Punica granatum
PGR042G0920 Punica granatum
PGR042G3465 Punica granatum
PGR083G0133 Punica granatum
PGR142G2535 Punica granatum
PGSC0003DMG400010118 Solanum tuberosum
PGSC0003DMG400012200 Solanum tuberosum
PGSC0003DMG400029308 Solanum tuberosum
Phvul.002G158200 Phaseolus vulgaris
Phvul.002G290900 Phaseolus vulgaris
Phvul.004G111400 Phaseolus vulgaris
Phvul.007G073100 Phaseolus vulgaris
Phvul.L001611 Phaseolus vulgaris
Potri.001G102200 Populus trichocarpa
Potri.002G001100 Populus trichocarpa
Potri.003G129400 Populus trichocarpa
Potri.005G260000 Populus trichocarpa
Potri.012G144200 Populus trichocarpa
Pp3c15_6950 Physcomitrium patens
Pp3c9_7640 Physcomitrium patens
Prupe.2G298300 Prunus persica
Prupe.5G000400 Prunus persica
Prupe.5G102900 Prunus persica
Psat0s728g0040 Pisum sativum
Psat6g000760 Pisum sativum
Psat7g032040 Pisum sativum
PSO017G6586 Papaver somniferum
PSO170G5991 Papaver somniferum
PSO478G3233 Papaver somniferum
PSO782G1211 Papaver somniferum
QL02p016478 Quercus lobata
QL09p013417 Quercus lobata
QL12p032562 Quercus lobata
RcHm_v2.0_Chr1g0377921 Rosa chinensis
RcHm_v2.0_Chr7g0197211 Rosa chinensis
RcHm_v2.0_Chr7g0217711 Rosa chinensis
Rhsim02G0233000 Rhododendron simsii
Rhsim03G0188800 Rhododendron simsii
Rhsim06G0000300 Rhododendron simsii
Rhsim07G0089100 Rhododendron simsii
RhsimUnG0027100 Rhododendron simsii
RhsimUnG0159900 Rhododendron simsii
Sabra01G0077300 Salix brachista
Sabra02G0000900 Salix brachista
Sabra03G0092000 Salix brachista
Sabra05G0201500 Salix brachista
Sabra12G0108200 Salix brachista
SalBow1G3032 Salvia bowleyana
SalBow4G0537 Salvia bowleyana
SalBow6G1519 Salvia bowleyana
SalBow7G2397 Salvia bowleyana
Sc01g0009680 Simmondsia chinensis
Sc07g0009790 Simmondsia chinensis
Sc15g0003990 Simmondsia chinensis
Sc19g0001370 Simmondsia chinensis
Sed0001065 Sechium edule
Sed0005403 Sechium edule
Sed0024007 Sechium edule
Sed0027620 Sechium edule
SEGI_29506 Sequoiadendron giganteum
SEGI_29937 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31709 Striga asiatica
SGA_v2.0_scaffold144G35931 Striga asiatica
SGA_v2.0_scaffold188G40295 Striga asiatica
SMO307G0081 Selaginella moellendorffii
Solyc03g025290.3 Solanum lycopersicum
Solyc08g081240.3 Solanum lycopersicum
Solyc12g095780.2 Solanum lycopersicum
Sopen03g004120 Solanum pennellii
Sopen08g029550 Solanum pennellii
Sopen12g031680 Solanum pennellii
Sp1g32290 Schrenkiella parvula
Sp2g00930 Schrenkiella parvula
Sp5g31820 Schrenkiella parvula
Sp6g14650 Schrenkiella parvula
Sp7g23650 Schrenkiella parvula
TAR374G1050 Trochodendron aralioides
TAR375G0469 Trochodendron aralioides
TAR376G0107 Trochodendron aralioides
TAR625G0385 Trochodendron aralioides
TAR625G0919 Trochodendron aralioides
TAR628G1114 Trochodendron aralioides
TAR636G0729 Trochodendron aralioides
THA.LOC104801649 Tarenaya hassleriana
THA.LOC104809380 Tarenaya hassleriana
THA.LOC104811970 Tarenaya hassleriana
THA.LOC104812027 Tarenaya hassleriana
THA.LOC104813212 Tarenaya hassleriana
Thecc.03G181000 Theobroma cacao
Thecc.03G181500 Theobroma cacao
Thecc.03G281400 Theobroma cacao
Thecc.08G097000 Theobroma cacao
Thhalv10005687m.g Eutrema salsugineum
Thhalv10013563m.g Eutrema salsugineum
Thhalv10018563m.g Eutrema salsugineum
Thhalv10023545m.g Eutrema salsugineum
Thhalv10025027m.g Eutrema salsugineum
TPR.G12750 Trifolium pratense
TPR.G26423 Trifolium pratense
TPR.G29205 Trifolium pratense
TPR.G2968 Trifolium pratense
TPR.G36365 Trifolium pratense
TWI12G1006 Tripterygium wilfordii
TWI39G0334 Tripterygium wilfordii
TWI60G1188 Tripterygium wilfordii
TWI81G0035 Tripterygium wilfordii
unitig_21.g20597 Utricularia gibba
unitig_26.g10194 Utricularia gibba
unitig_26.g10195 Utricularia gibba
unitig_52.g17234 Utricularia gibba
unitig_699.g19740 Utricularia gibba
unitig_699.g19741 Utricularia gibba
unitig_744.g24088 Utricularia gibba
vmacro06647 Vaccinium macrocarpon
vmacro11385 Vaccinium macrocarpon
vmacro13962 Vaccinium macrocarpon
vmacro21732 Vaccinium macrocarpon
VMungo0251G1817 Vigna mungo
VMungo0464G0387 Vigna mungo
VMungo0647G1928 Vigna mungo
VMungo0720G2681 Vigna mungo
VMungo1215G2175 Vigna mungo
Zm00001eb191070 Zea mays
Zm00001eb295630 Zea mays
Zm00001eb307660 Zea mays
Zm00001eb343570 Zea mays

User provided reference genes

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