Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07400 Brassica napus
A01p07420 Brassica napus
A01p07550 Brassica napus
A02p08140 Brassica napus
A03p60240 Brassica napus
A03p60290 Brassica napus
A08p19100 Brassica napus
Aa31LG2G19700 Aethionema arabicum
Aa31LG2G19710 Aethionema arabicum
Aa31LG2G19720 Aethionema arabicum
Aa31LG2G19740 Aethionema arabicum
Aa31LG7G12780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2427 Anthoceros agrestis
Actinidia23562 Actinidia chinensis
Actinidia38314 Actinidia chinensis
Actinidia38665 Actinidia chinensis
Ah.02g114820 Amaranthus hybridus
Ah.06g190930 Amaranthus hybridus
Ah.09g228800 Amaranthus hybridus
Ah.14g084560 Amaranthus hybridus
Ah.14g084590 Amaranthus hybridus
AL2G13470 Arabidopsis lyrata
AL2G13480 Arabidopsis lyrata
AL4G14100 Arabidopsis lyrata
AL7G21370 Arabidopsis lyrata
AL7G21440 Arabidopsis lyrata
AL8G33920 Arabidopsis lyrata
Aqoxy1G03712 Aquilegia oxysepala
Aqoxy1G03714 Aquilegia oxysepala
Aqoxy1G03715 Aquilegia oxysepala
Aqoxy4G01536 Aquilegia oxysepala
Aqoxy4G01538 Aquilegia oxysepala
Aqoxy7G03363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HA3262 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAD3X4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0PHQE Arachis hypogaea
AT1G62410 Arabidopsis thaliana
AT2G24050 Arabidopsis thaliana
AT4G30680 Arabidopsis thaliana
AT4G30770 Arabidopsis thaliana
AT5G57870 Arabidopsis thaliana
ATR0680G013 Amborella trichopoda
ATR0680G389 Amborella trichopoda
Atru.chr4.944 Acer truncatum
Atru.chr7.2555 Acer truncatum
Atru.chr7.43 Acer truncatum
AUR62000505 Chenopodium quinoa
AUR62006850 Chenopodium quinoa
AUR62025346 Chenopodium quinoa
AUR62028349 Chenopodium quinoa
AUR62029588 Chenopodium quinoa
AUR62034848 Chenopodium quinoa
BcaB03g12657 Brassica carinata
BcaB03g12658 Brassica carinata
BcaB05g22380 Brassica carinata
BcaC01g01138 Brassica carinata
BcaC09g51863 Brassica carinata
BcaC09g51866 Brassica carinata
BcaNung01562 Brassica carinata
BcaNung02743 Brassica carinata
BcaNung02748 Brassica carinata
BcaNung02964 Brassica carinata
BcaNung04827 Brassica carinata
BolC1t00803H Brassica oleracea
BolC1t00806H Brassica oleracea
BolC2t07498H Brassica oleracea
BolC3t21160H Brassica oleracea
BolC7t46274H Brassica oleracea
BraA01t00689Z Brassica rapa
BraA01t00691Z Brassica rapa
BraA01t00698Z Brassica rapa
BraA02t05888Z Brassica rapa
BraA02t07769Z Brassica rapa
BraA03t15064Z Brassica rapa
BraA03t15071Z Brassica rapa
BraA08t33872Z Brassica rapa
C01p08160 Brassica napus
C01p08180 Brassica napus
C02p13790 Brassica napus
C03p88500 Brassica napus
C07p58150 Brassica napus
C07p58200 Brassica napus
CAN.G160.30 Capsicum annuum
CAN.G160.34 Capsicum annuum
CAN.G160.35 Capsicum annuum
CAN.G160.41 Capsicum annuum
CAN.G160.42 Capsicum annuum
CAN.G551.48 Capsicum annuum
CANSAT01G1075 Cannabis sativa
CANSAT11G0739 Cannabis sativa
CARHR049510 Cardamine hirsuta
CARHR049520 Cardamine hirsuta
CARHR118300 Cardamine hirsuta
CARHR238560 Cardamine hirsuta
CARHR238610 Cardamine hirsuta
CARHR271610 Cardamine hirsuta
CARHR271630 Cardamine hirsuta
Carub.0002s0257 Capsella rubella
Carub.0004s0322 Capsella rubella
Carub.0007s0979 Capsella rubella
Carub.0007s0985 Capsella rubella
Carub.0008s1840 Capsella rubella
Ca_21140_v3 Cicer arietinum L.
Ca_21145_v3 Cicer arietinum L.
Ca_21739_v3 Cicer arietinum L.
CBR_g40296 Chara braunii
Cc06_g14730 Coffea canephora
CDE02G2014 Ceratophyllum demersum
CDE05G2103 Ceratophyllum demersum
Cfa020805 Carpinus fangiana
Cfa021634 Carpinus fangiana
Cfa021635 Carpinus fangiana
Ciclev10003211m.g Citrus clementina
Ciclev10007494m.g Citrus clementina
CiPaw.03G118500 Carya illinoinensis
CiPaw.03G118600 Carya illinoinensis
CiPaw.04G080200 Carya illinoinensis
CiPaw.15G166100 Carya illinoinensis
CiPaw.16G107800 Carya illinoinensis
ClCG02G000350 Citrullus lanatus
ClCG05G016210 Citrullus lanatus
ClCG06G012550 Citrullus lanatus
COL.COLO4_18960 Corchorus olitorius
COL.COLO4_28334 Corchorus olitorius
Cpa.g.sc1441.4 Carica papaya
Cpa.g.sc46.175 Carica papaya
Cre07.g349050 Chlamydomonas reinhardtii
Cre12.g529950 Chlamydomonas reinhardtii
Cre17.g696250 Chlamydomonas reinhardtii
CsaV3_1G029120 Cucumis sativus L.
CsaV3_2G019490 Cucumis sativus L.
CsaV3_4G036460 Cucumis sativus L.
CSS0025849 Camellia sinensis var. sinensis
CSS0026376 Camellia sinensis var. sinensis
CSS0031979 Camellia sinensis var. sinensis
CSS0043344 Camellia sinensis var. sinensis
DCAR_014804 Daucus carota
DCAR_017915 Daucus carota
DCAR_019406 Daucus carota
Dinv05464 Davidia involucrata
Dinv18461 Davidia involucrata
Dinv25762 Davidia involucrata
Dinv25763 Davidia involucrata
Dinv39633 Davidia involucrata
Dinv39634 Davidia involucrata
Dinv39636 Davidia involucrata
Dinv39638 Davidia involucrata
Dinv41361 Davidia involucrata
Dinv42837 Davidia involucrata
Dinv43262 Davidia involucrata
Duzib150G1143 Durio zibethinus
Duzib168G0848 Durio zibethinus
Duzib187G1251 Durio zibethinus
Duzib187G1961 Durio zibethinus
Duzib264G0973 Durio zibethinus
ECA234G4214 Erigeron canadensis
ECA234G4380 Erigeron canadensis
ECA234G4543 Erigeron canadensis
ECA240G3953 Erigeron canadensis
EL10Ac8g18929 Beta vulgaris
EL10Ac8g18993 Beta vulgaris
Eucgr.C00244 Eucalyptus grandis
Eucgr.C00247 Eucalyptus grandis
Eucgr.C00248 Eucalyptus grandis
Eucgr.H05149 Eucalyptus grandis
Eucgr.L01123 Eucalyptus grandis
Eucgr.L03242 Eucalyptus grandis
FAN15G2867 Fragaria x ananassa
FAN19G0125 Fragaria x ananassa
FAN20G2195 Fragaria x ananassa
FAN20G2738 Fragaria x ananassa
FAN23G0062 Fragaria x ananassa
FAN23G0776 Fragaria x ananassa
FAN26G3393 Fragaria x ananassa
FAN27G0335 Fragaria x ananassa
FAN28G0485 Fragaria x ananassa
FvH4_1g00720 Fragaria vesca
FvH4_1g24680 Fragaria vesca
FvH4_2g41200 Fragaria vesca
Glyma.02G205500 Glycine max
Glyma.04G154100 Glycine max
Glyma.04G210600 Glycine max
Glyma.06G155400 Glycine max
Glyma.06G225700 Glycine max
Glyma.08G001800 Glycine max
Glyma.17G072500 Glycine max
Gohir.A02G105904 Gossypium hirsutum
Gohir.A05G008800 Gossypium hirsutum
Gohir.A08G236300 Gossypium hirsutum
Gohir.A09G005000 Gossypium hirsutum
Gohir.A10G157222 Gossypium hirsutum
Gohir.A11G057300 Gossypium hirsutum
Gohir.A13G206600 Gossypium hirsutum
Gohir.D03G064800 Gossypium hirsutum
Gohir.D03G072502 Gossypium hirsutum
Gohir.D05G009500 Gossypium hirsutum
Gohir.D08G256900 Gossypium hirsutum
Gohir.D09G004300 Gossypium hirsutum
Gohir.D10G108200 Gossypium hirsutum
Gohir.D11G061300 Gossypium hirsutum
Gohir.D13G211200 Gossypium hirsutum
Gorai.004G273900 Gossypium raimondii
Gorai.006G005900 Gossypium raimondii
Gorai.007G066200 Gossypium raimondii
Gorai.009G009800 Gossypium raimondii
Gorai.011G118700 Gossypium raimondii
Gorai.013G105700 Gossypium raimondii
Gorai.013G241300 Gossypium raimondii
GSVIVG01023638001 Vitis vinifera
GSVIVG01035980001 Vitis vinifera
HanXRQChr10g0313681 Helianthus annuus
HanXRQChr12g0357731 Helianthus annuus
Haze_18313 Corylus avellana
Haze_19162 Corylus avellana
Haze_19183 Corylus avellana
Haze_21397 Corylus avellana
Haze_25311 Corylus avellana
Hma1.2p1_0028F.1_g017640 Hydrangea macrophylla
Hma1.2p1_0102F.1_g049780 Hydrangea macrophylla
HPP92_004456 Vanilla planifolia
HPP92_025164 Vanilla planifolia
HPP92_025177 Vanilla planifolia
Hund08929 Selenicereus undatus
Hund26112 Selenicereus undatus
Lalb_Chr07g0179911 Lupinus albus
Lalb_Chr07g0184281 Lupinus albus
Lalb_Chr08g0234261 Lupinus albus
Lalb_Chr11g0072531 Lupinus albus
Lalb_Chr11g0072541 Lupinus albus
Lalb_Chr11g0072551 Lupinus albus
Lalb_Chr11g0072561 Lupinus albus
Lalb_Chr12g0198771 Lupinus albus
Lalb_Chr12g0203061 Lupinus albus
Lalb_Chr13g0296701 Lupinus albus
Lalb_Chr13g0300751 Lupinus albus
Lalb_Chr13g0300761 Lupinus albus
Lalb_Chr21g0310731 Lupinus albus
Lj4g0007966 Lotus japonicus
Lj4g0017015 Lotus japonicus
Lj6g0015739 Lotus japonicus
Lj7A461T42 Lonicera japonica
Lj9A719G54 Lonicera japonica
Lj9A719T58 Lonicera japonica
Lsat_1_v5_gn_5_89460 Lactuca sativa
Lsat_1_v5_gn_7_50120 Lactuca sativa
Lsat_1_v5_gn_7_50141 Lactuca sativa
Manes.06G033200 Manihot esculenta
Manes.12G158100 Manihot esculenta
Manes.14G145600 Manihot esculenta
Mapoly0154s0021 Marchantia polymorpha
MBI14_g09471_MAGBIO Magnolia biondii
MBI15_g27183_MAGBIO Magnolia biondii
MCO04G454 Micromonas commoda
MD00G1091900 Malus domestica
MD02G1005900 Malus domestica
MD02G1006000 Malus domestica
MD08G1055200 Malus domestica
MD08G1055400 Malus domestica
MD15G1042000 Malus domestica
MD15G1150600 Malus domestica
Medtr4g130570 Medicago truncatula
Medtr8g094040 Medicago truncatula
MELO3C010207.2 Cucumis melo
MELO3C016952.2 Cucumis melo
MELO3C023225.2 Cucumis melo
Migut.J01287 Erythranthe guttata
Migut.J01290 Erythranthe guttata
Migut.J01373 Erythranthe guttata
Migut.K00310 Erythranthe guttata
MSTRG.10693 Avicennia marina
MSTRG.10704 Avicennia marina
MSTRG.26264 Avicennia marina
MSTRG.26275 Avicennia marina
Nitab4.5_0002320g0030 Nicotiana tabacum
Nitab4.5_0002320g0050 Nicotiana tabacum
Nitab4.5_0002724g0020 Nicotiana tabacum
Nitab4.5_0002724g0030 Nicotiana tabacum
Nitab4.5_0002724g0050 Nicotiana tabacum
Nitab4.5_0002891g0080 Nicotiana tabacum
Nitab4.5_0008875g0040 Nicotiana tabacum
Nitab4.5_0010207g0020 Nicotiana tabacum
Nn1g08946 Nelumbo nucifera
Nn2g12433 Nelumbo nucifera
Nn8g39967 Nelumbo nucifera
Oeu021322.1 Olea europaea
Oeu038136.2 Olea europaea
Oeu045034.1 Olea europaea
Oeu052209.1 Olea europaea
Oeu052211.1 Olea europaea
Oeu052213.1 Olea europaea
Oeu052214.1 Olea europaea
Os02g0611500 Oryza sativa ssp. japonica
Os04g0499300 Oryza sativa ssp. japonica
Os06g0520600 Oryza sativa ssp. japonica
Os11g0195700 Oryza sativa ssp. japonica
Os12g0182000 Oryza sativa ssp. japonica
Peaxi162Scf00062g00128 Petunia axillaris
Peaxi162Scf00401g00035 Petunia axillaris
Peaxi162Scf00401g00320 Petunia axillaris
PGR044G1916 Punica granatum
PGR044G2335 Punica granatum
PGR102G3103 Punica granatum
PGR142G2903 Punica granatum
PGSC0003DMG400007907 Solanum tuberosum
PGSC0003DMG400011196 Solanum tuberosum
Phvul.002G274200 Phaseolus vulgaris
Phvul.003G154900 Phaseolus vulgaris
Phvul.009G155100 Phaseolus vulgaris
Phvul.009G207600 Phaseolus vulgaris
Potri.005G066500 Populus trichocarpa
Potri.006G182100 Populus trichocarpa
Potri.006G265300 Populus trichocarpa
Potri.007G103000 Populus trichocarpa
Potri.018G017600 Populus trichocarpa
Potri.018G104100 Populus trichocarpa
Pp3c14_20220 Physcomitrium patens
Pp3c14_20340 Physcomitrium patens
Pp3c17_18440 Physcomitrium patens
Pp3c17_18640 Physcomitrium patens
Pp3c17_18740 Physcomitrium patens
PRCOL_00002981 Prasinoderma coloniale
PRCOL_00005649 Prasinoderma coloniale
Prupe.1G395100 Prunus persica
Prupe.4G274100 Prunus persica
Prupe.7G265100 Prunus persica
Psat0s3930g0080 Pisum sativum
Psat7g044600 Pisum sativum
PSO063G5273 Papaver somniferum
PSO135G0594 Papaver somniferum
PSO384G1808 Papaver somniferum
PSO384G2967 Papaver somniferum
PSO384G4793 Papaver somniferum
PSO782G0621 Papaver somniferum
QL02p018712 Quercus lobata
QL02p093542 Quercus lobata
QL02p093563 Quercus lobata
QL02p093571 Quercus lobata
QL02p093582 Quercus lobata
QL02p093790 Quercus lobata
QL10p041669 Quercus lobata
QL10p041674 Quercus lobata
QL10p041864 Quercus lobata
QL10p041870 Quercus lobata
RcHm_v2.0_Chr2g0085441 Rosa chinensis
RcHm_v2.0_Chr2g0122171 Rosa chinensis
RcHm_v2.0_Chr5g0028791 Rosa chinensis
RcHm_v2.0_Chr6g0299311 Rosa chinensis
Rhsim01G0027600 Rhododendron simsii
Rhsim03G0258200 Rhododendron simsii
Sabra05G0054800 Salix brachista
Sabra06G0138900 Salix brachista
Sabra06G0207900 Salix brachista
Sabra07G0084500 Salix brachista
Sabra17G0051500 Salix brachista
Sabra18G0020900 Salix brachista
Sabra18G0089500 Salix brachista
SalBow1G1788 Salvia bowleyana
Sc06g0005400 Simmondsia chinensis
Sc16g0009500 Simmondsia chinensis
Sc18g0003040 Simmondsia chinensis
Sed0002231 Sechium edule
Sed0004234 Sechium edule
Sed0009520 Sechium edule
Sed0024034 Sechium edule
Sed0025183 Sechium edule
Sed0026059 Sechium edule
SEGI_10819 Sequoiadendron giganteum
SEGI_11597 Sequoiadendron giganteum
SEGI_23117 Sequoiadendron giganteum
SEGI_29681 Sequoiadendron giganteum
SGA_v2.0_scaffold265G46091 Striga asiatica
SGA_v2.0_scaffold45G17021 Striga asiatica
SHI02844 Sapria himalayana
SMO367G1251 Selaginella moellendorffii
Solyc07g005780.2 Solanum lycopersicum
Solyc07g005810.3 Solanum lycopersicum
Solyc12g009960.2 Solanum lycopersicum
Sopen07g001880 Solanum pennellii
Sopen07g001910 Solanum pennellii
Sopen12g004830 Solanum pennellii
Sp2g02200 Schrenkiella parvula
Sp4g02960 Schrenkiella parvula
Sp6g19560 Schrenkiella parvula
Sp7g28590 Schrenkiella parvula
Sp7g28640 Schrenkiella parvula
TAR371G1063 Trochodendron aralioides
TAR374G1013 Trochodendron aralioides
TAR375G0119 Trochodendron aralioides
TAR381G0240 Trochodendron aralioides
TAR383G0277 Trochodendron aralioides
TAR383G0787 Trochodendron aralioides
TAR383G1049 Trochodendron aralioides
TAR592G0001 Trochodendron aralioides
TAR624G1006 Trochodendron aralioides
TAR625G0167 Trochodendron aralioides
TAR625G0454 Trochodendron aralioides
TAR625G0656 Trochodendron aralioides
TAR626G0066 Trochodendron aralioides
TAR626G1445 Trochodendron aralioides
TAR628G0376 Trochodendron aralioides
TAR629G0030 Trochodendron aralioides
TAR636G0172 Trochodendron aralioides
TAR636G2642 Trochodendron aralioides
TAR636G2883 Trochodendron aralioides
THA.LOC104803546 Tarenaya hassleriana
THA.LOC104804402 Tarenaya hassleriana
THA.LOC104804459 Tarenaya hassleriana
THA.LOC104810278 Tarenaya hassleriana
THA.LOC104813539 Tarenaya hassleriana
THA.LOC104817820 Tarenaya hassleriana
Thecc.01G136200 Theobroma cacao
Thecc.09G014800 Theobroma cacao
Thecc.09G151300 Theobroma cacao
Thhalv10000058m.g Eutrema salsugineum
Thhalv10012738m.g Eutrema salsugineum
Thhalv10024066m.g Eutrema salsugineum
Thhalv10027257m.g Eutrema salsugineum
TPR.G24856 Trifolium pratense
TPR.G37392 Trifolium pratense
TWI32G0015 Tripterygium wilfordii
TWI34G1132 Tripterygium wilfordii
TWI63G1644 Tripterygium wilfordii
TWI79G1507 Tripterygium wilfordii
unitig_0.g560 Utricularia gibba
unitig_60.g25507 Utricularia gibba
vmacro06061 Vaccinium macrocarpon
vmacro15944 Vaccinium macrocarpon
vmacro18492 Vaccinium macrocarpon
vmacro18494 Vaccinium macrocarpon
vmacro18496 Vaccinium macrocarpon
VMungo0251G3540 Vigna mungo
VMungo0537G0001 Vigna mungo
VMungo1080G0747 Vigna mungo
VMungo1215G2966 Vigna mungo
VMungo1309G0848 Vigna mungo
VMungo1309G2003 Vigna mungo
Zm00001eb078350 Zea mays
Zm00001eb112650 Zea mays
Zm00001eb202060 Zea mays
Zm00001eb381480 Zea mays
Zm00001eb408450 Zea mays
Zm00001eb425860 Zea mays

User provided reference genes

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