Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03250 Brassica napus
A01p23420 Brassica napus
A06p16830 Brassica napus
A08p29210 Brassica napus
A09p44650 Brassica napus
Aa31LG2G14860 Aethionema arabicum
Aa31LG7G13840 Aethionema arabicum
Aa31LG7G5000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2876 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2436 Anthoceros agrestis
Actinidia26327 Actinidia chinensis
Actinidia28616 Actinidia chinensis
Actinidia28752 Actinidia chinensis
Actinidia35688 Actinidia chinensis
Actinidia37908 Actinidia chinensis
Ah.01g017600 Amaranthus hybridus
Ah.03g148620 Amaranthus hybridus
AL1G33860 Arabidopsis lyrata
AL5G31930 Arabidopsis lyrata
AL7G15850 Arabidopsis lyrata
Aqoxy5G00972 Aquilegia oxysepala
Aqoxy6G01558 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0M3NHK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.63YJK9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6APV6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7E9Q5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BW9991 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D961UC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FUIL2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9GW1G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J90ZJL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KPV5JG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRG5I1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SL0VYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMD16A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TU9ZSA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMW75A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VIXM13 Arachis hypogaea
AT1G20840 Arabidopsis thaliana
AT3G51490 Arabidopsis thaliana
AT4G35300 Arabidopsis thaliana
ATR0807G155 Amborella trichopoda
Atru.chr13.77 Acer truncatum
Atru.chr5.3562 Acer truncatum
AUR62003727 Chenopodium quinoa
AUR62010178 Chenopodium quinoa
AUR62013179 Chenopodium quinoa
AUR62016573 Chenopodium quinoa
AUR62024104 Chenopodium quinoa
AUR62035161 Chenopodium quinoa
AUR62035162 Chenopodium quinoa
BcaB01g00509 Brassica carinata
BcaB03g12848 Brassica carinata
BcaB07g32079 Brassica carinata
BcaC05g25987 Brassica carinata
BcaC07g39056 Brassica carinata
BcaNung00382 Brassica carinata
BcaNung00607 Brassica carinata
BolC1t00350H Brassica oleracea
BolC1t02837H Brassica oleracea
BolC5t30642H Brassica oleracea
BolC8t49669H Brassica oleracea
BolC8t50288H Brassica oleracea
BraA01t00310Z Brassica rapa
BraA01t02249Z Brassica rapa
BraA06t24792Z Brassica rapa
BraA08t34856Z Brassica rapa
BraA09t39925Z Brassica rapa
C01p03600 Brassica napus
C01p29050 Brassica napus
C05p19390 Brassica napus
C08p20400 Brassica napus
C08p26750 Brassica napus
CAN.G1238.33 Capsicum annuum
CAN.G1330.4 Capsicum annuum
CAN.G1645.2 Capsicum annuum
CAN.G647.3 Capsicum annuum
CANSAT01G1927 Cannabis sativa
CANSAT25G1760 Cannabis sativa
CARHR021270 Cardamine hirsuta
CARHR161070 Cardamine hirsuta
CARHR243630 Cardamine hirsuta
Carub.0001s2030 Capsella rubella
Carub.0005s1787 Capsella rubella
Carub.0007s0499 Capsella rubella
Ca_02839_v3 Cicer arietinum L.
Ca_15272_v3 Cicer arietinum L.
Ca_15389_v3 Cicer arietinum L.
Ca_24994_v3 Cicer arietinum L.
Ca_29629_v3 Cicer arietinum L.
CBR_g41698 Chara braunii
Cc07_g12080 Coffea canephora
Cc09_g10840 Coffea canephora
Cc10_g00310 Coffea canephora
CDE02G3111 Ceratophyllum demersum
CDE04G2685 Ceratophyllum demersum
Cfa007105 Carpinus fangiana
Cfa014127 Carpinus fangiana
Cfa014131 Carpinus fangiana
Ciclev10000400m.g Citrus clementina
Ciclev10027893m.g Citrus clementina
CiPaw.05G093500 Carya illinoinensis
CiPaw.06G115100 Carya illinoinensis
CiPaw.07G134600 Carya illinoinensis
CiPaw.08G076700 Carya illinoinensis
ClCG01G020960 Citrullus lanatus
ClCG02G010410 Citrullus lanatus
ClCG08G009230 Citrullus lanatus
COL.COLO4_07686 Corchorus olitorius
COL.COLO4_34313 Corchorus olitorius
Cpa.g.sc26.107 Carica papaya
Cpa.g.sc26.111 Carica papaya
Cpa.g.sc60.12 Carica papaya
Cpa.g.sc60.13 Carica papaya
Cpa.g.sc91.48 Carica papaya
CsaV3_6G010070 Cucumis sativus L.
CsaV3_6G031370 Cucumis sativus L.
CsaV3_6G047910 Cucumis sativus L.
CSS0010191 Camellia sinensis var. sinensis
CSS0011753 Camellia sinensis var. sinensis
CSS0030411 Camellia sinensis var. sinensis
CSS0032782 Camellia sinensis var. sinensis
CSS0048699 Camellia sinensis var. sinensis
DCAR_006269 Daucus carota
DCAR_013938 Daucus carota
DCAR_014302 Daucus carota
DCAR_016794 Daucus carota
Dinv14176 Davidia involucrata
Dinv28303 Davidia involucrata
Dinv31978 Davidia involucrata
Dinv40208 Davidia involucrata
Dinv41869 Davidia involucrata
Duzib052G0962 Durio zibethinus
Duzib093G1436 Durio zibethinus
Duzib132G0420 Durio zibethinus
Duzib248G0638 Durio zibethinus
ECA232G0686 Erigeron canadensis
ECA233G3975 Erigeron canadensis
ECA246G4303 Erigeron canadensis
ECA246G5036 Erigeron canadensis
EL10Ac1g01886 Beta vulgaris
EL10Ac5g10895 Beta vulgaris
EL10Ac6g15035 Beta vulgaris
EL10Ac9g21539 Beta vulgaris
Eucgr.F01805 Eucalyptus grandis
Eucgr.F03585 Eucalyptus grandis
Eucgr.G01880 Eucalyptus grandis
Eucgr.I01534 Eucalyptus grandis
Eucgr.I02208 Eucalyptus grandis
Eucgr.I02209 Eucalyptus grandis
FAN03G1451 Fragaria x ananassa
FAN04G1227 Fragaria x ananassa
FAN13G0150 Fragaria x ananassa
FAN15G2241 Fragaria x ananassa
FAN18G2756 Fragaria x ananassa
FAN23G1031 Fragaria x ananassa
FAN23G2861 Fragaria x ananassa
FAN24G0349 Fragaria x ananassa
FAN24G1309 Fragaria x ananassa
FAN26G2085 Fragaria x ananassa
FAN27G1364 Fragaria x ananassa
FAN28G1219 Fragaria x ananassa
FAN28G2860 Fragaria x ananassa
FvH4_1g10110 Fragaria vesca
FvH4_1g10120 Fragaria vesca
FvH4_2g16850 Fragaria vesca
FvH4_5g25950 Fragaria vesca
Glyma.01G157300 Glycine max
Glyma.02G311700 Glycine max
Glyma.04G000300 Glycine max
Glyma.04G015000 Glycine max
Glyma.06G000200 Glycine max
Glyma.06G015000 Glycine max
Glyma.11G087700 Glycine max
Glyma.14G000900 Glycine max
Glyma.16G112500 Glycine max
Gohir.A01G011400 Gossypium hirsutum
Gohir.A01G102400 Gossypium hirsutum
Gohir.A03G170700 Gossypium hirsutum
Gohir.A04G111900 Gossypium hirsutum
Gohir.A13G064800 Gossypium hirsutum
Gohir.D01G012600 Gossypium hirsutum
Gohir.D01G087500 Gossypium hirsutum
Gohir.D02G193800 Gossypium hirsutum
Gohir.D04G152200 Gossypium hirsutum
Gohir.D13G057100 Gossypium hirsutum
Gorai.002G014400 Gossypium raimondii
Gorai.002G113400 Gossypium raimondii
Gorai.005G216600 Gossypium raimondii
Gorai.012G139000 Gossypium raimondii
Gorai.013G064200 Gossypium raimondii
GSVIVG01013414001 Vitis vinifera
GSVIVG01022309001 Vitis vinifera
GSVIVG01023868001 Vitis vinifera
HanXRQChr02g0036981 Helianthus annuus
HanXRQChr10g0298021 Helianthus annuus
HanXRQChr10g0316271 Helianthus annuus
HanXRQChr15g0476411 Helianthus annuus
HanXRQChr15g0479841 Helianthus annuus
HanXRQChr15g0479851 Helianthus annuus
HanXRQChr15g0493211 Helianthus annuus
HanXRQChr16g0515131 Helianthus annuus
HanXRQChr16g0532121 Helianthus annuus
Haze_01996 Corylus avellana
Haze_03637 Corylus avellana
Haze_22848 Corylus avellana
Hma1.2p1_0027F.1_g017030 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044440 Hydrangea macrophylla
Hma1.2p1_0093F.1_g047010 Hydrangea macrophylla
Hma1.2p1_0109F.1_g052456 Hydrangea macrophylla
Hma1.2p1_0314F.1_g122155 Hydrangea macrophylla
Hma1.2p1_0612F.1_g189010 Hydrangea macrophylla
Hma1.2p1_0631F.1_g192340 Hydrangea macrophylla
Hma1.2p1_0699F.1_g205650 Hydrangea macrophylla
Hma1.2p1_1340F.1_g276710 Hydrangea macrophylla
HPP92_007279 Vanilla planifolia
HPP92_007282 Vanilla planifolia
HPP92_007283 Vanilla planifolia
HPP92_022549 Vanilla planifolia
Hund00094 Selenicereus undatus
Hund05082 Selenicereus undatus
Hund06361 Selenicereus undatus
Hund19687 Selenicereus undatus
Lalb_Chr05g0229511 Lupinus albus
Lalb_Chr05g0229521 Lupinus albus
Lalb_Chr08g0246531 Lupinus albus
Lalb_Chr09g0324831 Lupinus albus
Lalb_Chr10g0107671 Lupinus albus
Lalb_Chr11g0061381 Lupinus albus
Lalb_Chr23g0265561 Lupinus albus
Lj1g0005338 Lotus japonicus
Lj1g0007358 Lotus japonicus
Lj2g0012931 Lotus japonicus
Lj4A239T51 Lonicera japonica
Lj4A811T121 Lonicera japonica
Lj4g0025950 Lotus japonicus
Lj9A408T84 Lonicera japonica
Lsat_1_v5_gn_3_48540 Lactuca sativa
Lsat_1_v5_gn_3_68921 Lactuca sativa
Lsat_1_v5_gn_8_121441 Lactuca sativa
Lsat_1_v5_gn_9_48641 Lactuca sativa
Manes.02G115600 Manihot esculenta
Manes.02G115700 Manihot esculenta
Manes.03G097500 Manihot esculenta
Manes.05G126200 Manihot esculenta
Manes.15G114800 Manihot esculenta
Manes.18G002700 Manihot esculenta
Mapoly0053s0102 Marchantia polymorpha
MBI08_g23117_MAGBIO Magnolia biondii
MBI08_g29071_MAGBIO Magnolia biondii
MD00G1158800 Malus domestica
MD02G1109100 Malus domestica
MD02G1109500 Malus domestica
MD02G1109600 Malus domestica
MD02G1109800 Malus domestica
MD02G1110100 Malus domestica
MD02G1112000 Malus domestica
MD02G1112200 Malus domestica
MD02G1112900 Malus domestica
MD02G1113300 Malus domestica
MD05G1139800 Malus domestica
MD06G1005100 Malus domestica
MD10G1142100 Malus domestica
MD15G1228300 Malus domestica
MD15G1228400 Malus domestica
Medtr3g116060 Medicago truncatula
Medtr3g118530 Medicago truncatula
Medtr5g024740 Medicago truncatula
Medtr5g028590 Medicago truncatula
Medtr5g044910 Medicago truncatula
Medtr8g073100 Medicago truncatula
MELO3C007980.2 Cucumis melo
MELO3C013489.2 Cucumis melo
MELO3C026522.2 Cucumis melo
Migut.H02215 Erythranthe guttata
Migut.N01360 Erythranthe guttata
Migut.O00311 Erythranthe guttata
Migut.O00312 Erythranthe guttata
MSTRG.22086 Avicennia marina
MSTRG.24510 Avicennia marina
MSTRG.3645 Avicennia marina
Nitab4.5_0000159g0130 Nicotiana tabacum
Nitab4.5_0000495g0020 Nicotiana tabacum
Nitab4.5_0000783g0080 Nicotiana tabacum
Nitab4.5_0000855g0050 Nicotiana tabacum
Nitab4.5_0001756g0110 Nicotiana tabacum
Nitab4.5_0004269g0060 Nicotiana tabacum
Nitab4.5_0006781g0030 Nicotiana tabacum
Nn5g31027 Nelumbo nucifera
Nn6g31664 Nelumbo nucifera
Oeu019575.1 Olea europaea
Oeu035856.1 Olea europaea
Oeu043396.1 Olea europaea
Oeu045741.1 Olea europaea
Oeu062546.1 Olea europaea
Os02g0229400 Oryza sativa ssp. japonica
Os02g0832100 Oryza sativa ssp. japonica
Os03g0128932 Oryza sativa ssp. japonica
Os04g0654550 Oryza sativa ssp. japonica
Os10g0539900 Oryza sativa ssp. japonica
Os11g0475600 Oryza sativa ssp. japonica
Os11g0620400 Oryza sativa ssp. japonica
Peaxi162Scf00061g00092 Petunia axillaris
Peaxi162Scf00362g00145 Petunia axillaris
Peaxi162Scf00680g00057 Petunia axillaris
Peaxi162Scf00920g00113 Petunia axillaris
PGR042G3685 Punica granatum
PGR083G1622 Punica granatum
PGR119G0931 Punica granatum
PGR119G2348 Punica granatum
PGR142G2162 Punica granatum
PGSC0003DMG400009994 Solanum tuberosum
PGSC0003DMG400013648 Solanum tuberosum
PGSC0003DMG400014664 Solanum tuberosum
PGSC0003DMG400018666 Solanum tuberosum
PGSC0003DMG400035539 Solanum tuberosum
Phvul.002G118100 Phaseolus vulgaris
Phvul.003G271500 Phaseolus vulgaris
Phvul.008G292400 Phaseolus vulgaris
Phvul.009G007600 Phaseolus vulgaris
Phvul.009G115500 Phaseolus vulgaris
Potri.002G006200 Populus trichocarpa
Potri.004G207100 Populus trichocarpa
Potri.005G098900 Populus trichocarpa
Potri.005G255400 Populus trichocarpa
Potri.009G168500 Populus trichocarpa
Pp3c13_15460 Physcomitrium patens
Pp3c21_2730 Physcomitrium patens
Pp3c22_8120 Physcomitrium patens
Pp3c3_21530 Physcomitrium patens
Pp3s914_10 Physcomitrium patens
Prupe.5G006300 Prunus persica
Prupe.7G185700 Prunus persica
Prupe.7G185800 Prunus persica
Prupe.7G186000 Prunus persica
Prupe.8G180600 Prunus persica
Psat2g147720 Pisum sativum
Psat2g147760 Pisum sativum
Psat4g105920 Pisum sativum
Psat5g000440 Pisum sativum
Psat5g008640 Pisum sativum
PSO170G2554 Papaver somniferum
PSO210G4097 Papaver somniferum
PSO541G3600 Papaver somniferum
PSO541G5516 Papaver somniferum
PSO639G0001 Papaver somniferum
PSO675G4935 Papaver somniferum
PSO675G9264 Papaver somniferum
QL02p015336 Quercus lobata
QL06p053283 Quercus lobata
QL11p056469 Quercus lobata
RcHm_v2.0_Chr1g0348791 Rosa chinensis
RcHm_v2.0_Chr2g0096881 Rosa chinensis
RcHm_v2.0_Chr2g0096891 Rosa chinensis
RcHm_v2.0_Chr2g0147991 Rosa chinensis
RcHm_v2.0_Chr4g0410581 Rosa chinensis
RcHm_v2.0_Chr4g0410591 Rosa chinensis
RcHm_v2.0_Chr5g0025901 Rosa chinensis
RcHm_v2.0_Chr6g0280981 Rosa chinensis
RcHm_v2.0_Chr7g0216371 Rosa chinensis
RcHm_v2.0_Chr7g0216381 Rosa chinensis
RcHm_v2.0_Chr7g0216501 Rosa chinensis
Rhsim05G0046600 Rhododendron simsii
Rhsim07G0257400 Rhododendron simsii
Rhsim08G0026500 Rhododendron simsii
RhsimUnG0141100 Rhododendron simsii
Sabra02G0004400 Salix brachista
Sabra04G0139400 Salix brachista
Sabra05G0081300 Salix brachista
Sabra09G0130800 Salix brachista
SalBow5G2430 Salvia bowleyana
SalBow5G3253 Salvia bowleyana
SalBow5G4274 Salvia bowleyana
SalBow7G1124 Salvia bowleyana
Sc02g0009230 Simmondsia chinensis
Sc03g0004090 Simmondsia chinensis
Sc08g0002140 Simmondsia chinensis
Sed0015929 Sechium edule
Sed0016318 Sechium edule
Sed0020182 Sechium edule
SEGI_06912 Sequoiadendron giganteum
SEGI_08528 Sequoiadendron giganteum
SEGI_17402 Sequoiadendron giganteum
SGA_v2.0_scaffold132G34579 Striga asiatica
SGA_v2.0_scaffold133G34615 Striga asiatica
SGA_v2.0_scaffold364G49992 Striga asiatica
SGA_v2.0_scaffold54G19630 Striga asiatica
SGA_v2.0_scaffold98G29303 Striga asiatica
SMO115G0201 Selaginella moellendorffii
SMO169G0023 Selaginella moellendorffii
SMO239G0077 Selaginella moellendorffii
SMO239G0173 Selaginella moellendorffii
Solyc02g082410.4 Solanum lycopersicum
Solyc03g032040.3 Solanum lycopersicum
Solyc04g082700.3 Solanum lycopersicum
Sopen01g054330 Solanum pennellii
Sopen02g027070 Solanum pennellii
Sopen03g005890 Solanum pennellii
Sopen04g036330 Solanum pennellii
Sp1g18540 Schrenkiella parvula
Sp5g10750 Schrenkiella parvula
Sp7g33100 Schrenkiella parvula
TAR374G1553 Trochodendron aralioides
TAR376G0442 Trochodendron aralioides
TAR381G1235 Trochodendron aralioides
TAR625G0025 Trochodendron aralioides
TAR628G0233 Trochodendron aralioides
TAR636G0260 Trochodendron aralioides
TAR636G3483 Trochodendron aralioides
THA.LOC104812001 Tarenaya hassleriana
THA.LOC104813741 Tarenaya hassleriana
THA.LOC104819694 Tarenaya hassleriana
Thecc.02G146500 Theobroma cacao
Thecc.08G064300 Theobroma cacao
Thhalv10006916m.g Eutrema salsugineum
Thhalv10011113m.g Eutrema salsugineum
Thhalv10024517m.g Eutrema salsugineum
TPR.G13733 Trifolium pratense
TPR.G13741 Trifolium pratense
TPR.G33792 Trifolium pratense
TPR.G38093 Trifolium pratense
TPR.G38221 Trifolium pratense
TPR.G38549 Trifolium pratense
TPR.G38569 Trifolium pratense
TWI12G0798 Tripterygium wilfordii
TWI31G0751 Tripterygium wilfordii
TWI36G1254 Tripterygium wilfordii
TWI73G0905 Tripterygium wilfordii
TWI75G0914 Tripterygium wilfordii
unitig_21.g20583 Utricularia gibba
unitig_699.g19679 Utricularia gibba
unitig_744.g24082 Utricularia gibba
vmacro04422 Vaccinium macrocarpon
vmacro17308 Vaccinium macrocarpon
vmacro18472 Vaccinium macrocarpon
VMungo0251G2574 Vigna mungo
VMungo1215G0468 Vigna mungo
VMungo1309G2585 Vigna mungo
VMungo1309G2589 Vigna mungo
Zm00001eb022230 Zea mays
Zm00001eb166700 Zea mays
Zm00001eb228740 Zea mays
Zm00001eb239520 Zea mays

User provided reference genes

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