Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18180 Brassica napus
A02p10000 Brassica napus
A02p16360 Brassica napus
A07p31230 Brassica napus
A07p36630 Brassica napus
A07p36640 Brassica napus
A10p12210 Brassica napus
Aa31LG3G10800 Aethionema arabicum
Aa31LG4G10740 Aethionema arabicum
Aa31LG4G10750 Aethionema arabicum
Aa31LG5G10390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3431 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1700 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis
Actinidia05104 Actinidia chinensis
Actinidia05105 Actinidia chinensis
Actinidia08187 Actinidia chinensis
Actinidia08188 Actinidia chinensis
Actinidia09907 Actinidia chinensis
Actinidia10726 Actinidia chinensis
Actinidia35336 Actinidia chinensis
Ah.04g165800 Amaranthus hybridus
Ah.06g186210 Amaranthus hybridus
Ah.06g186240 Amaranthus hybridus
AL2G29430 Arabidopsis lyrata
AL2G29440 Arabidopsis lyrata
AL2G31230 Arabidopsis lyrata
AL4G14890 Arabidopsis lyrata
AL6G36940 Arabidopsis lyrata
AL7G18670 Arabidopsis lyrata
AL7G25810 Arabidopsis lyrata
AL8G30330 Arabidopsis lyrata
Aqoxy1G03263 Aquilegia oxysepala
Aqoxy3G00874 Aquilegia oxysepala
Aqoxy3G00876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98149C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BY7ESR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GYS7G4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H6313A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HWX1MU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJQZ0C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea
AT1G70150 Arabidopsis thaliana
AT1G70160 Arabidopsis thaliana
AT4G27020 Arabidopsis thaliana
AT5G54870 Arabidopsis thaliana
ATR0712G045 Amborella trichopoda
ATR0712G115 Amborella trichopoda
ATR0712G122 Amborella trichopoda
ATR0752G085 Amborella trichopoda
Atru.chr11.1937 Acer truncatum
Atru.chr2.3377 Acer truncatum
AUR62015744 Chenopodium quinoa
AUR62020468 Chenopodium quinoa
AUR62026306 Chenopodium quinoa
AUR62026308 Chenopodium quinoa
AUR62026309 Chenopodium quinoa
AUR62026500 Chenopodium quinoa
AUR62026502 Chenopodium quinoa
AUR62026503 Chenopodium quinoa
BcaB05g22166 Brassica carinata
BcaB05g24524 Brassica carinata
BcaB08g35855 Brassica carinata
BcaC03g14278 Brassica carinata
BcaC03g15158 Brassica carinata
BcaC04g20289 Brassica carinata
BcaC08g46464 Brassica carinata
BcaC08g46465 Brassica carinata
BcaNung01866 Brassica carinata
BcaNung03577 Brassica carinata
BcaNung07338 Brassica carinata
BcaNung07392 Brassica carinata
BolC1t02248H Brassica oleracea
BolC1t02252H Brassica oleracea
BolC2t07756H Brassica oleracea
BolC2t08792H Brassica oleracea
BolC6t38751H Brassica oleracea
BolC6t39476H Brassica oleracea
BolC6t39477H Brassica oleracea
BolC9t57412H Brassica oleracea
BraA01t01773Z Brassica rapa
BraA02t06064Z Brassica rapa
BraA02t06694Z Brassica rapa
BraA07t31231Z Brassica rapa
BraA07t31232Z Brassica rapa
BraA10t43317Z Brassica rapa
C01p23140 Brassica napus
C01p23170 Brassica napus
C02p16580 Brassica napus
C02p27310 Brassica napus
C06p36290 Brassica napus
C06p36300 Brassica napus
C06p44030 Brassica napus
C06p44040 Brassica napus
C09p45430 Brassica napus
CAN.G159.8 Capsicum annuum
CAN.G159.9 Capsicum annuum
CAN.G337.116 Capsicum annuum
CAN.G88.14 Capsicum annuum
CAN.G88.15 Capsicum annuum
CANSAT01G0136 Cannabis sativa
CANSAT01G1494 Cannabis sativa
CANSAT01G3099 Cannabis sativa
CARHR063240 Cardamine hirsuta
CARHR234680 Cardamine hirsuta
CARHR268210 Cardamine hirsuta
Carub.0002s1684 Capsella rubella
Carub.0002s1685 Capsella rubella
Carub.0007s1382 Capsella rubella
Carub.0008s1517 Capsella rubella
Ca_06310_v3 Cicer arietinum L.
Ca_24163_v3 Cicer arietinum L.
CBR_g21843 Chara braunii
CBR_g72156 Chara braunii
Cc05_g13600 Coffea canephora
Cc11_g14060 Coffea canephora
Cc11_g14260 Coffea canephora
CDE04G0648 Ceratophyllum demersum
CDE05G1391 Ceratophyllum demersum
CDE10G0936 Ceratophyllum demersum
CDE11G0222 Ceratophyllum demersum
Cfa020371 Carpinus fangiana
Ciclev10008210m.g Citrus clementina
Ciclev10031248m.g Citrus clementina
Ciclev10031837m.g Citrus clementina
CiPaw.05G145400 Carya illinoinensis
CiPaw.05G145500 Carya illinoinensis
CiPaw.11G187900 Carya illinoinensis
CiPaw.12G128700 Carya illinoinensis
ClCG05G014400 Citrullus lanatus
ClCG05G024960 Citrullus lanatus
ClCG05G024970 Citrullus lanatus
COL.COLO4_09645 Corchorus olitorius
COL.COLO4_36283 Corchorus olitorius
Cpa.g.sc1960.1 Carica papaya
Cpa.g.sc5.332 Carica papaya
Cpa.g.sc97.22 Carica papaya
Cpa.g.sc97.26 Carica papaya
Cre02.g093401 Chlamydomonas reinhardtii
CsaV3_3G022940 Cucumis sativus L.
CsaV3_3G022950 Cucumis sativus L.
CsaV3_5G031920 Cucumis sativus L.
CsaV3_5G031930 Cucumis sativus L.
CSS0025749 Camellia sinensis var. sinensis
CSS0029688 Camellia sinensis var. sinensis
CSS0034706 Camellia sinensis var. sinensis
CSS0034923 Camellia sinensis var. sinensis
CSS0041958 Camellia sinensis var. sinensis
CSS0043132 Camellia sinensis var. sinensis
DCAR_021940 Daucus carota
DCAR_022555 Daucus carota
DCAR_024515 Daucus carota
Dinv24915 Davidia involucrata
Dinv24916 Davidia involucrata
Dinv31124 Davidia involucrata
Dinv40741 Davidia involucrata
Duzib213G0444 Durio zibethinus
Duzib248G0730 Durio zibethinus
Duzib251G0488 Durio zibethinus
Duzib268G0371 Durio zibethinus
Duzib268G0504 Durio zibethinus
ECA234G1431 Erigeron canadensis
ECA236G2430 Erigeron canadensis
EL10Ac4g07840 Beta vulgaris
EL10Ac6g13111 Beta vulgaris
EL10Ac6g13112 Beta vulgaris
Eucgr.B02569 Eucalyptus grandis
Eucgr.B02570 Eucalyptus grandis
Eucgr.F00552 Eucalyptus grandis
Eucgr.F00555 Eucalyptus grandis
Eucgr.F00801 Eucalyptus grandis
Eucgr.F00885 Eucalyptus grandis
Eucgr.F00888 Eucalyptus grandis
Eucgr.F00891 Eucalyptus grandis
Eucgr.F00893 Eucalyptus grandis
Eucgr.F00901 Eucalyptus grandis
Eucgr.F00907 Eucalyptus grandis
Eucgr.F00947 Eucalyptus grandis
Eucgr.F00949 Eucalyptus grandis
Eucgr.F00962 Eucalyptus grandis
Eucgr.F03459 Eucalyptus grandis
Eucgr.L02722 Eucalyptus grandis
Eucgr.L02785 Eucalyptus grandis
FAN07G0845 Fragaria x ananassa
FAN07G1235 Fragaria x ananassa
FAN11G2006 Fragaria x ananassa
FAN12G1952 Fragaria x ananassa
FAN12G3783 Fragaria x ananassa
FAN16G0670 Fragaria x ananassa
FAN17G2278 Fragaria x ananassa
FAN21G3023 Fragaria x ananassa
FAN22G1682 Fragaria x ananassa
FAN25G1375 Fragaria x ananassa
FvH4_3g22420 Fragaria vesca
FvH4_4g35210 Fragaria vesca
FvH4_4g35220 Fragaria vesca
Glyma.01G037300 Glycine max
Glyma.01G037400 Glycine max
Glyma.02G027500 Glycine max
Glyma.02G027600 Glycine max
Glyma.02G289900 Glycine max
Glyma.14G025100 Glycine max
Glyma.14G089051 Glycine max
Glyma.18G131200 Glycine max
Gohir.A01G078800 Gossypium hirsutum
Gohir.A03G143500 Gossypium hirsutum
Gohir.A04G018600 Gossypium hirsutum
Gohir.A05G319500 Gossypium hirsutum
Gohir.D01G065900 Gossypium hirsutum
Gohir.D02G166800 Gossypium hirsutum
Gohir.D05G321700 Gossypium hirsutum
Gohir.D05G367400 Gossypium hirsutum
Gorai.002G087800 Gossypium raimondii
Gorai.005G187100 Gossypium raimondii
Gorai.009G345200 Gossypium raimondii
Gorai.009G435000 Gossypium raimondii
GSVIVG01000707001 Vitis vinifera
GSVIVG01020147001 Vitis vinifera
GSVIVG01020148001 Vitis vinifera
GSVIVG01037617001 Vitis vinifera
GSVIVG01037621001 Vitis vinifera
HanXRQChr08g0233971 Helianthus annuus
HanXRQChr11g0336201 Helianthus annuus
HanXRQChr17g0570121 Helianthus annuus
HanXRQChr17g0570131 Helianthus annuus
HanXRQChr17g0570291 Helianthus annuus
Haze_09658 Corylus avellana
Haze_12124 Corylus avellana
Hma1.2p1_0673F.1_g201220 Hydrangea macrophylla
Hma1.2p1_1162F.1_g262750 Hydrangea macrophylla
Hma1.2p1_1162F.1_g262760 Hydrangea macrophylla
Hma1.2p1_1271F.1_g271710 Hydrangea macrophylla
HPP92_002468 Vanilla planifolia
HPP92_017085 Vanilla planifolia
HPP92_017600 Vanilla planifolia
Hund00741 Selenicereus undatus
Hund02068 Selenicereus undatus
Hund23259 Selenicereus undatus
Hund25294 Selenicereus undatus
Hund25295 Selenicereus undatus
Lalb_Chr04g0248521 Lupinus albus
Lalb_Chr04g0248531 Lupinus albus
Lalb_Chr05g0217271 Lupinus albus
Lalb_Chr09g0335211 Lupinus albus
Lalb_Chr10g0106931 Lupinus albus
Lalb_Chr16g0382531 Lupinus albus
Lj2g0007192 Lotus japonicus
Lj2g0008023 Lotus japonicus
Lj3g0027125 Lotus japonicus
Lj4g0012021 Lotus japonicus
Lj4g0020240 Lotus japonicus
Lj6A799T78 Lonicera japonica
Lj6A799T79 Lonicera japonica
Lj8A168T99 Lonicera japonica
LjContig00272g0006163 Lotus japonicus
Lsat_1_v5_gn_4_6121 Lactuca sativa
Lsat_1_v5_gn_4_6141 Lactuca sativa
Lsat_1_v5_gn_5_6101 Lactuca sativa
Lsat_1_v5_gn_7_108781 Lactuca sativa
Lsat_1_v5_gn_8_161201 Lactuca sativa
Manes.01G195300 Manihot esculenta
Manes.01G195400 Manihot esculenta
Manes.03G124700 Manihot esculenta
Manes.15G073100 Manihot esculenta
Mapoly0033s0144 Marchantia polymorpha
Mapoly0056s0134 Marchantia polymorpha
MBI02_g19289_MAGBIO Magnolia biondii
MBI02_g22100_MAGBIO Magnolia biondii
MCO10G058 Micromonas commoda
MD03G1205200 Malus domestica
MD11G1221100 Malus domestica
MD13G1085400 Malus domestica
MD13G1085500 Malus domestica
MD16G1084700 Malus domestica
MD16G1084800 Malus domestica
Medtr5g036420 Medicago truncatula
Medtr5g036455 Medicago truncatula
Medtr5g036470 Medicago truncatula
Medtr5g092140 Medicago truncatula
MELO3C012029.2 Cucumis melo
MELO3C012030.2 Cucumis melo
MELO3C018112.2 Cucumis melo
MELO3C018115.2 Cucumis melo
Migut.H01833 Erythranthe guttata
Migut.L01385 Erythranthe guttata
Migut.L01386 Erythranthe guttata
Migut.M01778 Erythranthe guttata
MSTRG.15156 Avicennia marina
MSTRG.7858 Avicennia marina
MSTRG.7859 Avicennia marina
Nitab4.5_0000653g0040 Nicotiana tabacum
Nitab4.5_0000749g0160 Nicotiana tabacum
Nitab4.5_0001604g0110 Nicotiana tabacum
Nitab4.5_0001604g0120 Nicotiana tabacum
Nitab4.5_0001913g0040 Nicotiana tabacum
Nitab4.5_0002312g0080 Nicotiana tabacum
Nitab4.5_0002312g0090 Nicotiana tabacum
Nitab4.5_0003602g0010 Nicotiana tabacum
Nitab4.5_0003602g0020 Nicotiana tabacum
Nitab4.5_0004336g0040 Nicotiana tabacum
Nn1g03568 Nelumbo nucifera
Nn1g07116 Nelumbo nucifera
Nn4g22931 Nelumbo nucifera
Nn4g22934 Nelumbo nucifera
Oeu012242.1 Olea europaea
Oeu020121.1 Olea europaea
Oeu028546.1 Olea europaea
Oeu042930.1 Olea europaea
Oeu062593.1 Olea europaea
Os01g0793500 Oryza sativa ssp. japonica
Os01g0793600 Oryza sativa ssp. japonica
Os07g0481000 Oryza sativa ssp. japonica
Os08g0425000 Oryza sativa ssp. japonica
Os09g0392000 Oryza sativa ssp. japonica
Peaxi162Scf00424g00044 Petunia axillaris
Peaxi162Scf00450g00740 Petunia axillaris
Peaxi162Scf00828g00020 Petunia axillaris
Peaxi162Scf00964g00150 Petunia axillaris
Peaxi162Scf01097g00315 Petunia axillaris
Peaxi162Scf01141g00027 Petunia axillaris
PGR031G3696 Punica granatum
PGR083G1708 Punica granatum
PGR119G0319 Punica granatum
PGR119G0405 Punica granatum
PGSC0003DMG400022615 Solanum tuberosum
PGSC0003DMG401022324 Solanum tuberosum
PGSC0003DMG401022613 Solanum tuberosum
PGSC0003DMG402001095 Solanum tuberosum
PGSC0003DMG402022324 Solanum tuberosum
Phvul.002G076800 Phaseolus vulgaris
Phvul.003G055900 Phaseolus vulgaris
Phvul.008G266000 Phaseolus vulgaris
Potri.001G424500 Populus trichocarpa
Potri.010G036900 Populus trichocarpa
Potri.010G037600 Populus trichocarpa
Potri.011G137700 Populus trichocarpa
Pp3c21_870 Physcomitrium patens
Pp3c6_16030 Physcomitrium patens
Pp3c9_21180 Physcomitrium patens
Prupe.1G261300 Prunus persica
Prupe.1G261400 Prunus persica
Prupe.1G261600 Prunus persica
Prupe.4G210700 Prunus persica
Prupe.4G210800 Prunus persica
Psat2g013760 Pisum sativum
Psat2g112600 Pisum sativum
Psat2g112640 Pisum sativum
PSO161G0115 Papaver somniferum
PSO478G4672 Papaver somniferum
PSO541G0820 Papaver somniferum
PSO541G1185 Papaver somniferum
PSO541G1641 Papaver somniferum
PSO675G4017 Papaver somniferum
PSO675G6074 Papaver somniferum
QL03p067260 Quercus lobata
QL03p067270 Quercus lobata
QL08p010731 Quercus lobata
QL08p011185 Quercus lobata
RcHm_v2.0_Chr4g0444811 Rosa chinensis
RcHm_v2.0_Chr4g0444821 Rosa chinensis
RcHm_v2.0_Chr5g0039091 Rosa chinensis
Rhsim12G0051400 Rhododendron simsii
Rhsim12G0051800 Rhododendron simsii
RhsimUnG0251500 Rhododendron simsii
Sabra10G0028400 Salix brachista
Sabra10G0028500 Salix brachista
Sabra11G0123600 Salix brachista
Sabra16G0288700 Salix brachista
SalBow2G0480 Salvia bowleyana
SalBow2G3155 Salvia bowleyana
SalBow2G3257 Salvia bowleyana
SalBow7G1134 Salvia bowleyana
Sc03g0008660 Simmondsia chinensis
Sc14g0008470 Simmondsia chinensis
Sed0003407 Sechium edule
Sed0007740 Sechium edule
Sed0021588 Sechium edule
Sed0026477 Sechium edule
SEGI_23380 Sequoiadendron giganteum
SEGI_25303 Sequoiadendron giganteum
SEGI_33690 Sequoiadendron giganteum
SEGI_39493 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04270 Striga asiatica
SGA_v2.0_scaffold8G04273 Striga asiatica
SGA_v2.0_scaffold9G05074 Striga asiatica
SHI05275 Sapria himalayana
SHI26632 Sapria himalayana
SMO091G0008 Selaginella moellendorffii
SMO238G0008 Selaginella moellendorffii
SMO353G0091 Selaginella moellendorffii
Solyc01g033990.1 Solanum lycopersicum
Solyc05g006400.2 Solanum lycopersicum
Solyc05g006410.3 Solanum lycopersicum
Solyc07g064420.3 Solanum lycopersicum
Solyc07g064440.3 Solanum lycopersicum
Solyc12g005120.2 Solanum lycopersicum
Sopen01g017410 Solanum pennellii
Sopen05g002330 Solanum pennellii
Sopen05g002340 Solanum pennellii
Sopen07g032630 Solanum pennellii
Sopen07g032640 Solanum pennellii
Sopen12g001120 Solanum pennellii
Sp5g25260 Schrenkiella parvula
Sp5g25270 Schrenkiella parvula
Sp6g16840 Schrenkiella parvula
Sp7g24980 Schrenkiella parvula
TAR374G0054 Trochodendron aralioides
TAR374G0908 Trochodendron aralioides
TAR627G0153 Trochodendron aralioides
TAR629G2836 Trochodendron aralioides
THA.LOC104808873 Tarenaya hassleriana
THA.LOC104817662 Tarenaya hassleriana
THA.LOC104822951 Tarenaya hassleriana
Thecc.02G239700 Theobroma cacao
Thecc.02G240100 Theobroma cacao
Thecc.07G042700 Theobroma cacao
Thhalv10013232m.g Eutrema salsugineum
Thhalv10018393m.g Eutrema salsugineum
Thhalv10018717m.g Eutrema salsugineum
Thhalv10024847m.g Eutrema salsugineum
TPR.G1200 Trifolium pratense
TPR.G17205 Trifolium pratense
TPR.G17319 Trifolium pratense
TPR.G17335 Trifolium pratense
TWI36G0457 Tripterygium wilfordii
TWI39G0655 Tripterygium wilfordii
TWI75G0635 Tripterygium wilfordii
TWI75G1025 Tripterygium wilfordii
TWI75G1284 Tripterygium wilfordii
unitig_26.g9958 Utricularia gibba
unitig_26.g9959 Utricularia gibba
unitig_699.g19927 Utricularia gibba
unitig_749.g13260 Utricularia gibba
vmacro01202 Vaccinium macrocarpon
vmacro01204 Vaccinium macrocarpon
vmacro09728 Vaccinium macrocarpon
vmacro11733 Vaccinium macrocarpon
VMungo0251G2752 Vigna mungo
VMungo0647G2548 Vigna mungo
VMungo1215G3058 Vigna mungo
Zm00001eb000150 Zea mays
Zm00001eb179200 Zea mays
Zm00001eb311860 Zea mays
Zm00001eb321400 Zea mays
Zm00001eb369650 Zea mays

User provided reference genes

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