Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33490 Brassica napus
A06p43060 Brassica napus
A09p24460 Brassica napus
A09p24470 Brassica napus
A09p24480 Brassica napus
A09p39860 Brassica napus
Aa31LG2G7060 Aethionema arabicum
Aa31LG2G7080 Aethionema arabicum
Aa31LG2G7090 Aethionema arabicum
Aa31LG7G8660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5130 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5498 Anthoceros agrestis
Actinidia16169 Actinidia chinensis
Actinidia27477 Actinidia chinensis
Actinidia28647 Actinidia chinensis
Ah.02g126880 Amaranthus hybridus
Ah.03g138920 Amaranthus hybridus
Ah.12g062680 Amaranthus hybridus
AL5G13280 Arabidopsis lyrata
AL5G13290 Arabidopsis lyrata
AL5G13300 Arabidopsis lyrata
AL5G13380 Arabidopsis lyrata
AL5G13390 Arabidopsis lyrata
Aqoxy1G03330 Aquilegia oxysepala
Aqoxy2G04192 Aquilegia oxysepala
Aqoxy3G00500 Aquilegia oxysepala
Aqoxy3G03632 Aquilegia oxysepala
Aqoxy3G03636 Aquilegia oxysepala
Aqoxy4G01191 Aquilegia oxysepala
Aqoxy5G02539 Aquilegia oxysepala
Aqoxy5G03485 Aquilegia oxysepala
Aqoxy6G00332 Aquilegia oxysepala
Aqoxy7G03574 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57CZ3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5V9IQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7P1NK6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7GNKA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FW6EXK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJS1BZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LF1DJC Arachis hypogaea
AT1G26440 Arabidopsis thaliana
AT2G03510 Arabidopsis thaliana
AT2G03520 Arabidopsis thaliana
AT2G03530 Arabidopsis thaliana
AT2G03590 Arabidopsis thaliana
AT2G03600 Arabidopsis thaliana
ATR0064G010 Amborella trichopoda
ATR0064G046 Amborella trichopoda
ATR0767G203 Amborella trichopoda
Atru.chr11.1633 Acer truncatum
AUR62003101 Chenopodium quinoa
AUR62003102 Chenopodium quinoa
AUR62003104 Chenopodium quinoa
AUR62007918 Chenopodium quinoa
AUR62007920 Chenopodium quinoa
AUR62007921 Chenopodium quinoa
AUR62018180 Chenopodium quinoa
AUR62038666 Chenopodium quinoa
BcaB07g30294 Brassica carinata
BcaB07g30295 Brassica carinata
BcaB07g30664 Brassica carinata
BcaB07g30666 Brassica carinata
BcaB07g30667 Brassica carinata
BcaC03g17224 Brassica carinata
BcaC03g17227 Brassica carinata
BcaC04g21476 Brassica carinata
BcaC04g21478 Brassica carinata
BcaC04g21485 Brassica carinata
BcaC05g26412 Brassica carinata
BcaC05g26414 Brassica carinata
BcaC05g26415 Brassica carinata
BcaC05g26630 Brassica carinata
BolC2t11243H Brassica oleracea
BolC2t11244H Brassica oleracea
BolC5t31191H Brassica oleracea
BolC9t55982H Brassica oleracea
BolC9t55989H Brassica oleracea
BolC9t55993H Brassica oleracea
BraA02t08370Z Brassica rapa
BraA09t38039Z Brassica rapa
BraA09t38040Z Brassica rapa
BraA09t38041Z Brassica rapa
BraA09t39485Z Brassica rapa
C02p51560 Brassica napus
C02p51590 Brassica napus
C05p24550 Brassica napus
C09p31260 Brassica napus
C09p31310 Brassica napus
C09p31350 Brassica napus
CAN.G59.21 Capsicum annuum
CAN.G59.22 Capsicum annuum
CAN.G616.39 Capsicum annuum
CAN.G616.42 Capsicum annuum
CAN.G66.1 Capsicum annuum
CANSAT64G0915 Cannabis sativa
CANSAT64G1061 Cannabis sativa
CANSAT64G1096 Cannabis sativa
CARHR025520 Cardamine hirsuta
CARHR145860 Cardamine hirsuta
CARHR145870 Cardamine hirsuta
CARHR145880 Cardamine hirsuta
CARHR145940 Cardamine hirsuta
CARHR145960 Cardamine hirsuta
Carub.0001s2458 Capsella rubella
Carub.0005s0265 Capsella rubella
Carub.0005s0266 Capsella rubella
Carub.0005s0267 Capsella rubella
Carub.0005s0274 Capsella rubella
Carub.0005s0275 Capsella rubella
Ca_04970_v3 Cicer arietinum L.
Ca_04971_v3 Cicer arietinum L.
Ca_18800_v3 Cicer arietinum L.
CBR_g22084 Chara braunii
Cc11_g11970 Coffea canephora
Cc11_g12040 Coffea canephora
CDE02G0606 Ceratophyllum demersum
CDE02G4439 Ceratophyllum demersum
CDE05G0079 Ceratophyllum demersum
Cfa008816 Carpinus fangiana
Cfa008883 Carpinus fangiana
Ciclev10031708m.g Citrus clementina
Ciclev10031905m.g Citrus clementina
CiPaw.05G125500 Carya illinoinensis
CiPaw.06G092300 Carya illinoinensis
CiPaw.06G092400 Carya illinoinensis
ClCG00G002530 Citrullus lanatus
ClCG00G002540 Citrullus lanatus
ClCG05G023720 Citrullus lanatus
ClCG08G010360 Citrullus lanatus
ClCG09G008780 Citrullus lanatus
COL.COLO4_27888 Corchorus olitorius
COL.COLO4_27890 Corchorus olitorius
COL.COLO4_27891 Corchorus olitorius
Cpa.g.sc1.121 Carica papaya
Cpa.g.sc1.122 Carica papaya
CsaV3_5G023130 Cucumis sativus L.
CsaV3_5G033290 Cucumis sativus L.
CsaV3_5G033300 Cucumis sativus L.
CsaV3_5G033310 Cucumis sativus L.
CsaV3_6G032550 Cucumis sativus L.
CsaV3_6G033630 Cucumis sativus L.
CsaV3_7G026170 Cucumis sativus L.
CSS0004672 Camellia sinensis var. sinensis
CSS0007431 Camellia sinensis var. sinensis
CSS0020772 Camellia sinensis var. sinensis
CSS0022048 Camellia sinensis var. sinensis
CSS0025210 Camellia sinensis var. sinensis
CSS0028231 Camellia sinensis var. sinensis
CSS0036366 Camellia sinensis var. sinensis
DCAR_007192 Daucus carota
DCAR_007193 Daucus carota
DCAR_011041 Daucus carota
DCAR_023803 Daucus carota
DCAR_027473 Daucus carota
DCAR_030039 Daucus carota
Dinv16729 Davidia involucrata
Dinv16730 Davidia involucrata
Dinv34071 Davidia involucrata
Dinv34072 Davidia involucrata
Duzib248G0196 Durio zibethinus
Duzib248G0501 Durio zibethinus
Duzib251G0156 Durio zibethinus
ECA233G0115 Erigeron canadensis
ECA233G3689 Erigeron canadensis
ECA233G5287 Erigeron canadensis
ECA246G4329 Erigeron canadensis
EL10Ac2g03137 Beta vulgaris
EL10Ac6g14993 Beta vulgaris
Eucgr.B03152 Eucalyptus grandis
Eucgr.B03154 Eucalyptus grandis
Eucgr.B03155 Eucalyptus grandis
Eucgr.B03159 Eucalyptus grandis
Eucgr.G02448 Eucalyptus grandis
Eucgr.G02450 Eucalyptus grandis
FAN07G1596 Fragaria x ananassa
FAN12G3979 Fragaria x ananassa
FAN17G2247 Fragaria x ananassa
FAN17G2567 Fragaria x ananassa
FAN22G1389 Fragaria x ananassa
FvH4_4g30100 Fragaria vesca
FvH4_4g30101 Fragaria vesca
FvH4_4g30102 Fragaria vesca
FvH4_4g30104 Fragaria vesca
Glyma.01G058500 Glycine max
Glyma.02G116300 Glycine max
Glyma.02G116400 Glycine max
Glyma.07G225600 Glycine max
Glyma.20G025600 Glycine max
Gohir.A13G082200 Gossypium hirsutum
Gohir.A13G082300 Gossypium hirsutum
Gohir.A13G082366 Gossypium hirsutum
Gohir.A13G082832 Gossypium hirsutum
Gohir.D12G164650 Gossypium hirsutum
Gohir.D13G081800 Gossypium hirsutum
Gohir.D13G081900 Gossypium hirsutum
Gohir.D13G082300 Gossypium hirsutum
Gorai.008G177300 Gossypium raimondii
Gorai.008G177400 Gossypium raimondii
Gorai.013G093700 Gossypium raimondii
Gorai.013G093800 Gossypium raimondii
Gorai.013G094100 Gossypium raimondii
GSVIVG01012214001 Vitis vinifera
GSVIVG01012215001 Vitis vinifera
HanXRQChr08g0211791 Helianthus annuus
HanXRQChr08g0211801 Helianthus annuus
HanXRQChr08g0223901 Helianthus annuus
HanXRQChr12g0375271 Helianthus annuus
HanXRQChr15g0477081 Helianthus annuus
Haze_11912 Corylus avellana
Haze_11913 Corylus avellana
Hma1.2p1_0566F.1_g179720 Hydrangea macrophylla
Hma1.2p1_0566F.1_g179740 Hydrangea macrophylla
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla
HPP92_006053 Vanilla planifolia
HPP92_020445 Vanilla planifolia
Hund05837 Selenicereus undatus
Hund13149 Selenicereus undatus
Hund25178 Selenicereus undatus
Hund25179 Selenicereus undatus
Hund25180 Selenicereus undatus
Hund25181 Selenicereus undatus
Lalb_Chr03g0038291 Lupinus albus
Lalb_Chr04g0255661 Lupinus albus
Lalb_Chr05g0219941 Lupinus albus
Lalb_Chr10g0098811 Lupinus albus
Lj2g0006276 Lotus japonicus
Lj2g0026661 Lotus japonicus
Lj2g0027776 Lotus japonicus
Lj3C1030G23 Lonicera japonica
Lj4g0006249 Lotus japonicus
Lj6A779G76 Lonicera japonica
Lj6A779T73 Lonicera japonica
Lj6C779T14 Lonicera japonica
Lju41A3T70 Lonicera japonica
Lsat_1_v5_gn_3_53800 Lactuca sativa
Lsat_1_v5_gn_8_46581 Lactuca sativa
Lsat_1_v5_gn_8_46620 Lactuca sativa
Lsat_1_v5_gn_8_46640 Lactuca sativa
Manes.01G027800 Manihot esculenta
Manes.01G027900 Manihot esculenta
Manes.01G028100 Manihot esculenta
Mapoly0004s0019 Marchantia polymorpha
Mapoly0033s0146 Marchantia polymorpha
Mapoly0041s0056 Marchantia polymorpha
Mapoly0103s0027 Marchantia polymorpha
MBI16_g24179_MAGBIO Magnolia biondii
MBI19_g16671_MAGBIO Magnolia biondii
MBI19_g36248_MAGBIO Magnolia biondii
MBI19_g36252_MAGBIO Magnolia biondii
MD13G1063100 Malus domestica
MD16G1061500 Malus domestica
MD16G1061600 Malus domestica
MD16G1164500 Malus domestica
Medtr4g083100 Medicago truncatula
Medtr5g044710 Medicago truncatula
Medtr5g045520 Medicago truncatula
Medtr5g045530 Medicago truncatula
MELO3C011425.2 Cucumis melo
MELO3C012151.2 Cucumis melo
MELO3C012152.2 Cucumis melo
MELO3C021060.2 Cucumis melo
Migut.K01275 Erythranthe guttata
Migut.L01193 Erythranthe guttata
Migut.L01194 Erythranthe guttata
MSTRG.2306 Avicennia marina
MSTRG.2309 Avicennia marina
MSTRG.2310 Avicennia marina
MSTRG.2311 Avicennia marina
MSTRG.751 Avicennia marina
Nitab4.5_0000014g0390 Nicotiana tabacum
Nitab4.5_0000231g0350 Nicotiana tabacum
Nitab4.5_0000231g0390 Nicotiana tabacum
Nitab4.5_0001487g0070 Nicotiana tabacum
Nitab4.5_0001487g0110 Nicotiana tabacum
Nitab4.5_0003345g0030 Nicotiana tabacum
Nitab4.5_0005173g0020 Nicotiana tabacum
Nitab4.5_0012903g0020 Nicotiana tabacum
Nn3g17437 Nelumbo nucifera
Nn3g17440 Nelumbo nucifera
Nn4g23419 Nelumbo nucifera
Nn4g23422 Nelumbo nucifera
Oeu017531.1 Olea europaea
Oeu021805.1 Olea europaea
Oeu048143.1 Olea europaea
Oeu048144.1 Olea europaea
Os03g0421400 Oryza sativa ssp. japonica
Os12g0502800 Oryza sativa ssp. japonica
Os12g0503000 Oryza sativa ssp. japonica
Os12g0503300 Oryza sativa ssp. japonica
Peaxi162Scf00026g00178 Petunia axillaris
Peaxi162Scf00175g00121 Petunia axillaris
Peaxi162Scf00175g00122 Petunia axillaris
Peaxi162Scf00667g00619 Petunia axillaris
PGR102G1113 Punica granatum
PGR102G1705 Punica granatum
PGR119G1585 Punica granatum
PGSC0003DMG400009830 Solanum tuberosum
PGSC0003DMG400017798 Solanum tuberosum
PGSC0003DMG400028374 Solanum tuberosum
PGSC0003DMG400028375 Solanum tuberosum
Phvul.002G102100 Phaseolus vulgaris
Phvul.003G042700 Phaseolus vulgaris
Phvul.003G042800 Phaseolus vulgaris
Phvul.010G069400 Phaseolus vulgaris
Potri.008G095500 Populus trichocarpa
Potri.008G095600 Populus trichocarpa
Potri.010G158700 Populus trichocarpa
Pp3c15_100 Physcomitrium patens
Pp3c1_8060 Physcomitrium patens
Pp3c26_310 Physcomitrium patens
Pp3c2_37740 Physcomitrium patens
Pp3c5_5560 Physcomitrium patens
Prupe.1G286500 Prunus persica
Prupe.1G286600 Prunus persica
Psat2g130280 Pisum sativum
Psat2g130320 Pisum sativum
Psat2g130760 Pisum sativum
Psat2g130840 Pisum sativum
Psat7g134560 Pisum sativum
PSO017G5650 Papaver somniferum
PSO017G6564 Papaver somniferum
PSO210G1607 Papaver somniferum
PSO421G0738 Papaver somniferum
PSO478G1327 Papaver somniferum
PSO478G1668 Papaver somniferum
PSO478G2440 Papaver somniferum
QL01p050908 Quercus lobata
QL01p050911 Quercus lobata
QL03p071364 Quercus lobata
QL03p071373 Quercus lobata
QL03p071549 Quercus lobata
QL03p071622 Quercus lobata
QL03p071691 Quercus lobata
QL03p071709 Quercus lobata
QL03p071737 Quercus lobata
QL03p071791 Quercus lobata
QL03p071836 Quercus lobata
QL03p071850 Quercus lobata
QL03p071882 Quercus lobata
QL03p071961 Quercus lobata
QL03p071975 Quercus lobata
QL03p071994 Quercus lobata
QL03p072246 Quercus lobata
QL03p072323 Quercus lobata
QL03p072348 Quercus lobata
QL06p022506 Quercus lobata
RcHm_v2.0_Chr4g0438401 Rosa chinensis
RcHm_v2.0_Chr4g0438411 Rosa chinensis
RcHm_v2.0_Chr4g0438431 Rosa chinensis
RcHm_v2.0_Chr4g0438441 Rosa chinensis
RcHm_v2.0_Chr4g0438461 Rosa chinensis
Rhsim12G0074900 Rhododendron simsii
Rhsim12G0136200 Rhododendron simsii
Rhsim12G0136300 Rhododendron simsii
Sabra08G0071900 Salix brachista
Sabra08G0072000 Salix brachista
Sabra10G0120500 Salix brachista
SalBow1G7182 Salvia bowleyana
SalBow2G3309 Salvia bowleyana
SalBow6G5336 Salvia bowleyana
Sc04g0007600 Simmondsia chinensis
Sc10g0004640 Simmondsia chinensis
Sc11g0002420 Simmondsia chinensis
Sed0002322 Sechium edule
Sed0003297 Sechium edule
Sed0011650 Sechium edule
Sed0017486 Sechium edule
Sed0023981 Sechium edule
Sed0025249 Sechium edule
Sed0025746 Sechium edule
Sed0027135 Sechium edule
SEGI_06703 Sequoiadendron giganteum
SEGI_10839 Sequoiadendron giganteum
SEGI_28419 Sequoiadendron giganteum
SEGI_36053 Sequoiadendron giganteum
SEGI_37700 Sequoiadendron giganteum
SEGI_38290 Sequoiadendron giganteum
SEGI_41081 Sequoiadendron giganteum
SGA_v2.0_scaffold154G37110 Striga asiatica
SGA_v2.0_scaffold16G07780 Striga asiatica
SGA_v2.0_scaffold16G07785 Striga asiatica
SGA_v2.0_scaffold16G07788 Striga asiatica
SGA_v2.0_scaffold36G14455 Striga asiatica
SGA_v2.0_scaffold41G15839 Striga asiatica
SMO145G0087 Selaginella moellendorffii
SMO301G0023 Selaginella moellendorffii
SMO364G0146 Selaginella moellendorffii
Solyc01g010290.4 Solanum lycopersicum
Solyc04g005410.3 Solanum lycopersicum
Solyc05g012310.4 Solanum lycopersicum
Solyc05g012325.1 Solanum lycopersicum
Solyc05g012340.4 Solanum lycopersicum
Sopen01g005910 Solanum pennellii
Sopen04g001400 Solanum pennellii
Sopen05g007140 Solanum pennellii
Sopen05g007160 Solanum pennellii
Sopen05g007170 Solanum pennellii
Sp1g22290 Schrenkiella parvula
Sp2g14420 Schrenkiella parvula
Sp2g14430 Schrenkiella parvula
Sp2g14450 Schrenkiella parvula
TAR264G0001 Trochodendron aralioides
TAR374G0621 Trochodendron aralioides
TAR622G0883 Trochodendron aralioides
TAR629G0348 Trochodendron aralioides
TAR629G0983 Trochodendron aralioides
TAR629G1471 Trochodendron aralioides
TAR629G2660 Trochodendron aralioides
THA.LOC104805193 Tarenaya hassleriana
THA.LOC104805194 Tarenaya hassleriana
THA.LOC104805195 Tarenaya hassleriana
THA.LOC104822011 Tarenaya hassleriana
THA.LOC104824057 Tarenaya hassleriana
THA.LOC104824058 Tarenaya hassleriana
Thecc.02G331000 Theobroma cacao
Thecc.02G331400 Theobroma cacao
Thecc.02G331500 Theobroma cacao
Thecc.02G331800 Theobroma cacao
Thhalv10004375m.g Eutrema salsugineum
Thhalv10004477m.g Eutrema salsugineum
Thhalv10005450m.g Eutrema salsugineum
Thhalv10007943m.g Eutrema salsugineum
Thhalv10022792m.g Eutrema salsugineum
Thhalv10022979m.g Eutrema salsugineum
TPR.G24444 Trifolium pratense
TPR.G24446 Trifolium pratense
TPR.G24466 Trifolium pratense
TPR.G34031 Trifolium pratense
TWI31G0870 Tripterygium wilfordii
TWI31G1273 Tripterygium wilfordii
TWI31G1464 Tripterygium wilfordii
TWI79G1301 Tripterygium wilfordii
unitig_22.g6493 Utricularia gibba
unitig_26.g10288 Utricularia gibba
unitig_62.g23696 Utricularia gibba
vmacro01316 Vaccinium macrocarpon
vmacro16384 Vaccinium macrocarpon
vmacro16385 Vaccinium macrocarpon
vmacro16386 Vaccinium macrocarpon
VMungo0251G0716 Vigna mungo
VMungo1215G0124 Vigna mungo
VMungo1215G0269 Vigna mungo
Zm00001eb020150 Zea mays
Zm00001eb138100 Zea mays
Zm00001eb261920 Zea mays
Zm00001eb393170 Zea mays
Zm00001eb409270 Zea mays

User provided reference genes

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