Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37290 Brassica napus
A03p45650 Brassica napus
A05p37550 Brassica napus
A06p22170 Brassica napus
A07p04870 Brassica napus
A07p04890 Brassica napus
Aa31LG3G5280 Aethionema arabicum
Aa31LG4G13690 Aethionema arabicum
Aa31LG8G13430 Aethionema arabicum
Aa31LG8G13440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4003 Anthoceros agrestis
Actinidia00475 Actinidia chinensis
Actinidia03870 Actinidia chinensis
Actinidia03978 Actinidia chinensis
Actinidia37760 Actinidia chinensis
Ah.01g019910 Amaranthus hybridus
Ah.02g112890 Amaranthus hybridus
Ah.02g112920 Amaranthus hybridus
Ah.11g045560 Amaranthus hybridus
Ah.12g059330 Amaranthus hybridus
AL3G23370 Arabidopsis lyrata
AL3G47750 Arabidopsis lyrata
AL5G22180 Arabidopsis lyrata
AL8G23250 Arabidopsis lyrata
AL9U11330 Arabidopsis lyrata
Aqoxy1G00633 Aquilegia oxysepala
Aqoxy230s002 Aquilegia oxysepala
Aqoxy4G03213 Aquilegia oxysepala
Aqoxy6G00480 Aquilegia oxysepala
Aqoxy6G00927 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.34YEZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5J0CRS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5W3I9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BWES1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJTT5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FTA1AJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MVV0D6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N78PK4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5HWFM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3RKJQ Arachis hypogaea
AT2G15910 Arabidopsis thaliana
AT3G11800 Arabidopsis thaliana
AT3G44150 Arabidopsis thaliana
AT3G48630 Arabidopsis thaliana
ATR0026G014 Amborella trichopoda
ATR0665G411 Amborella trichopoda
ATR0680G390 Amborella trichopoda
ATR0807G173 Amborella trichopoda
ATR1120G038 Amborella trichopoda
Atru.chr13.1402 Acer truncatum
Atru.chr5.2833 Acer truncatum
Atru.chr5.2877 Acer truncatum
Atru.chr8.1318 Acer truncatum
AUR62008308 Chenopodium quinoa
AUR62008309 Chenopodium quinoa
AUR62011406 Chenopodium quinoa
AUR62016653 Chenopodium quinoa
AUR62021787 Chenopodium quinoa
AUR62025645 Chenopodium quinoa
AUR62030722 Chenopodium quinoa
BcaB01g01196 Brassica carinata
BcaB03g16342 Brassica carinata
BcaB04g18661 Brassica carinata
BcaB06g25576 Brassica carinata
BcaB06g25583 Brassica carinata
BcaB08g34617 Brassica carinata
BcaB08g34618 Brassica carinata
BcaC01g02075 Brassica carinata
BcaC01g03046 Brassica carinata
BcaC01g03047 Brassica carinata
BcaC01g04085 Brassica carinata
BcaC05g29329 Brassica carinata
BcaC06g36098 Brassica carinata
BcaC06g36100 Brassica carinata
BolC3t16779H Brassica oleracea
BolC3t17955H Brassica oleracea
BolC3t19139H Brassica oleracea
BolC5t34278H Brassica oleracea
BolC7t41203H Brassica oleracea
BolC7t42644H Brassica oleracea
BraA03t12889Z Brassica rapa
BraA03t13697Z Brassica rapa
BraA05t22553Z Brassica rapa
BraA06t25307Z Brassica rapa
BraA07t28279Z Brassica rapa
C03p45150 Brassica napus
C03p56710 Brassica napus
C03p68810 Brassica napus
C05p56110 Brassica napus
C07p07850 Brassica napus
C07p07870 Brassica napus
CAN.G134.164 Capsicum annuum
CAN.G322.87 Capsicum annuum
CAN.G674.9 Capsicum annuum
CAN.G675.7 Capsicum annuum
CANSAT25G2166 Cannabis sativa
CANSAT64G0882 Cannabis sativa
CANSAT80G1477 Cannabis sativa
CARHR086350 Cardamine hirsuta
CARHR106250 Cardamine hirsuta
CARHR106260 Cardamine hirsuta
CARHR152930 Cardamine hirsuta
Carub.0003s1113 Capsella rubella
Carub.0003s2979 Capsella rubella
Carub.0003s2981 Capsella rubella
Carub.0005s0987 Capsella rubella
Carub.0005s2923 Capsella rubella
Ca_11676_v3 Cicer arietinum L.
Ca_20813_v3 Cicer arietinum L.
Ca_20817_v3 Cicer arietinum L.
CBR_g78629 Chara braunii
Cc02_g18230 Coffea canephora
Cc02_g18240 Coffea canephora
Cc02_g18280 Coffea canephora
Cc06_g06740 Coffea canephora
CDE06G2451 Ceratophyllum demersum
CDE07G0396 Ceratophyllum demersum
CDE07G1446 Ceratophyllum demersum
Cfa004943 Carpinus fangiana
Cfa004947 Carpinus fangiana
Cfa010190 Carpinus fangiana
Cfa010191 Carpinus fangiana
Cfa020057 Carpinus fangiana
Ciclev10012616m.g Citrus clementina
Ciclev10029171m.g Citrus clementina
Ciclev10030268m.g Citrus clementina
CiPaw.03G121900 Carya illinoinensis
CiPaw.05G058300 Carya illinoinensis
CiPaw.05G058700 Carya illinoinensis
CiPaw.09G022000 Carya illinoinensis
CiPaw.10G019100 Carya illinoinensis
CiPaw.13G128400 Carya illinoinensis
ClCG02G005510 Citrullus lanatus
ClCG02G022470 Citrullus lanatus
ClCG09G017660 Citrullus lanatus
ClCG10G018190 Citrullus lanatus
COL.COLO4_11738 Corchorus olitorius
COL.COLO4_17203 Corchorus olitorius
COL.COLO4_17775 Corchorus olitorius
COL.COLO4_25401 Corchorus olitorius
COL.COLO4_29531 Corchorus olitorius
Cpa.g.sc103.21 Carica papaya
Cpa.g.sc1467.4 Carica papaya
Cpa.g.sc62.75 Carica papaya
Cpa.g.sc62.81 Carica papaya
Cre06.g287800 Chlamydomonas reinhardtii
Cre16.g653850 Chlamydomonas reinhardtii
CsaV3_2G014260 Cucumis sativus L.
CsaV3_3G038120 Cucumis sativus L.
CsaV3_6G038610 Cucumis sativus L.
CsaV3_7G010120 Cucumis sativus L.
CSS0001418 Camellia sinensis var. sinensis
CSS0016799 Camellia sinensis var. sinensis
CSS0020019 Camellia sinensis var. sinensis
CSS0021822 Camellia sinensis var. sinensis
CSS0026492 Camellia sinensis var. sinensis
CSS0040790 Camellia sinensis var. sinensis
CSS0041191 Camellia sinensis var. sinensis
CSS0049334 Camellia sinensis var. sinensis
DCAR_020688 Daucus carota
DCAR_022074 Daucus carota
DCAR_022076 Daucus carota
Dinv12354 Davidia involucrata
Dinv28822 Davidia involucrata
Dinv31777 Davidia involucrata
Dinv42112 Davidia involucrata
Duzib052G0457 Durio zibethinus
Duzib093G1781 Durio zibethinus
Duzib128G1643 Durio zibethinus
Duzib132G0052 Durio zibethinus
Duzib132G0586 Durio zibethinus
Duzib168G1050 Durio zibethinus
Duzib170G0546 Durio zibethinus
Duzib248G0815 Durio zibethinus
ECA236G0052 Erigeron canadensis
ECA248G0512 Erigeron canadensis
EL10Ac5g10871 Beta vulgaris
EL10Ac5g11848 Beta vulgaris
EL10Ac9g21799 Beta vulgaris
Eucgr.A02567 Eucalyptus grandis
Eucgr.F03329 Eucalyptus grandis
Eucgr.G00508 Eucalyptus grandis
Eucgr.G01513 Eucalyptus grandis
Eucgr.G01534 Eucalyptus grandis
Eucgr.K01919 Eucalyptus grandis
FAN02G2542 Fragaria x ananassa
FAN05G3908 Fragaria x ananassa
FAN05G4645 Fragaria x ananassa
FAN09G0382 Fragaria x ananassa
FAN14G5175 Fragaria x ananassa
FAN15G0904 Fragaria x ananassa
FAN19G1239 Fragaria x ananassa
FAN20G0902 Fragaria x ananassa
FAN24G2790 Fragaria x ananassa
FAN26G1996 Fragaria x ananassa
FAN28G0653 Fragaria x ananassa
FAN28G0897 Fragaria x ananassa
FvH4_2g07220 Fragaria vesca
FvH4_6g20620 Fragaria vesca
Glyma.02G194800 Glycine max
Glyma.10G082900 Glycine max
Glyma.11G123600 Glycine max
Glyma.11G124400 Glycine max
Glyma.11G175537 Glycine max
Glyma.12G048200 Glycine max
Glyma.12G048800 Glycine max
Glyma.12G095500 Glycine max
Gohir.A01G200400 Gossypium hirsutum
Gohir.A04G055300 Gossypium hirsutum
Gohir.A04G115800 Gossypium hirsutum
Gohir.A09G221800 Gossypium hirsutum
Gohir.A12G030200 Gossypium hirsutum
Gohir.A13G037000 Gossypium hirsutum
Gohir.D01G190500 Gossypium hirsutum
Gohir.D12G042200 Gossypium hirsutum
Gohir.D13G035300 Gossypium hirsutum
Gorai.002G234200 Gossypium raimondii
Gorai.006G245400 Gossypium raimondii
Gorai.008G044200 Gossypium raimondii
Gorai.013G040100 Gossypium raimondii
GSVIVG01022561001 Vitis vinifera
GSVIVG01031847001 Vitis vinifera
HanXRQChr03g0074331 Helianthus annuus
HanXRQChr04g0128381 Helianthus annuus
HanXRQChr07g0193971 Helianthus annuus
HanXRQChr11g0347161 Helianthus annuus
HanXRQChr13g0398491 Helianthus annuus
Haze_02462 Corylus avellana
Haze_02464 Corylus avellana
Haze_02466 Corylus avellana
Haze_02468 Corylus avellana
Haze_20141 Corylus avellana
Haze_23577 Corylus avellana
Hma1.2p1_0064F.1_g034560 Hydrangea macrophylla
Hma1.2p1_0065F.1_g035410 Hydrangea macrophylla
Hma1.2p1_0167F.1_g073920 Hydrangea macrophylla
Hma1.2p1_0167F.1_g073930 Hydrangea macrophylla
Hma1.2p1_0584F.1_g183260 Hydrangea macrophylla
Hma1.2p1_1353F.1_g277710 Hydrangea macrophylla
Hma1.2p1_1353F.1_g277750 Hydrangea macrophylla
Hma1.2p1_1527F.1_g289036 Hydrangea macrophylla
Hma1.2p1_1557F.1_g290600 Hydrangea macrophylla
Hma1.2p1_1557F.1_g290605 Hydrangea macrophylla
HPP92_015642 Vanilla planifolia
HPP92_025391 Vanilla planifolia
Hund06200 Selenicereus undatus
Hund10846 Selenicereus undatus
Lalb_Chr01g0002991 Lupinus albus
Lalb_Chr02g0154351 Lupinus albus
Lalb_Chr03g0025961 Lupinus albus
Lalb_Chr03g0028471 Lupinus albus
Lj1A1057T27 Lonicera japonica
Lj3g0024398 Lotus japonicus
Lj3g0025626 Lotus japonicus
Lj5A205T66 Lonicera japonica
Lj5g0025545 Lotus japonicus
Lsat_1_v5_gn_1_58400 Lactuca sativa
Lsat_1_v5_gn_2_32760 Lactuca sativa
Lsat_1_v5_gn_6_34861 Lactuca sativa
Lsat_1_v5_gn_7_87961 Lactuca sativa
Lsat_1_v5_gn_9_109081 Lactuca sativa
Manes.08G035200 Manihot esculenta
Manes.09G043700 Manihot esculenta
Manes.15G145700 Manihot esculenta
Manes.17G096100 Manihot esculenta
Manes.17G096600 Manihot esculenta
Mapoly0002s0208 Marchantia polymorpha
Mapoly0016s0025 Marchantia polymorpha
MapolyY_B0022 Marchantia polymorpha
MBI05_g33249_MAGBIO Magnolia biondii
MBI15_g36679_MAGBIO Magnolia biondii
MCO08G009 Micromonas commoda
MCO09G282 Micromonas commoda
MD02G1202900 Malus domestica
MD03G1158900 Malus domestica
MD05G1072900 Malus domestica
MD10G1086600 Malus domestica
MD11G1174300 Malus domestica
MD12G1042300 Malus domestica
MD14G1041500 Malus domestica
Medtr0311s0010 Medicago truncatula
Medtr1g056390 Medicago truncatula
Medtr4g068290 Medicago truncatula
Medtr4g068370 Medicago truncatula
MELO3C009553.2 Cucumis melo
MELO3C014523.2 Cucumis melo
MELO3C018416.2 Cucumis melo
MELO3C021927.2 Cucumis melo
MELO3C030214.2 Cucumis melo
Migut.B00295 Erythranthe guttata
Migut.J00725 Erythranthe guttata
Migut.N01213 Erythranthe guttata
MSTRG.16775 Avicennia marina
Nitab4.5_0000220g0100 Nicotiana tabacum
Nitab4.5_0000473g0050 Nicotiana tabacum
Nitab4.5_0001401g0190 Nicotiana tabacum
Nitab4.5_0002165g0050 Nicotiana tabacum
Nitab4.5_0002543g0020 Nicotiana tabacum
Nitab4.5_0004946g0010 Nicotiana tabacum
Nitab4.5_0005466g0030 Nicotiana tabacum
Nitab4.5_0008194g0080 Nicotiana tabacum
Nitab4.5_0011291g0010 Nicotiana tabacum
Nn2g14353 Nelumbo nucifera
Nn2g15585 Nelumbo nucifera
Nn4g24619 Nelumbo nucifera
Nn4g24620 Nelumbo nucifera
Nn6g32133 Nelumbo nucifera
Nn6g34631 Nelumbo nucifera
Nn7g36402 Nelumbo nucifera
Oeu003708.1 Olea europaea
Oeu007243.1 Olea europaea
Oeu010568.1 Olea europaea
Oeu027242.1 Olea europaea
Oeu035656.1 Olea europaea
Oeu049444.1 Olea europaea
Oeu061687.1 Olea europaea
Oeu063074.1 Olea europaea
Os03g0647800 Oryza sativa ssp. japonica
Os03g0787100 Oryza sativa ssp. japonica
Os06g0661600 Oryza sativa ssp. japonica
Peaxi162Scf00003g02039 Petunia axillaris
Peaxi162Scf00016g00132 Petunia axillaris
Peaxi162Scf00083g01925 Petunia axillaris
Peaxi162Scf00211g00113 Petunia axillaris
PGR004G1510 Punica granatum
PGR042G3549 Punica granatum
PGR142G1036 Punica granatum
PGR142G2315 Punica granatum
PGSC0003DMG400006221 Solanum tuberosum
PGSC0003DMG400028142 Solanum tuberosum
Phvul.007G267000 Phaseolus vulgaris
Phvul.011G050400 Phaseolus vulgaris
Phvul.011G050900 Phaseolus vulgaris
Phvul.011G099900 Phaseolus vulgaris
Potri.004G146800 Populus trichocarpa
Potri.006G201600 Populus trichocarpa
Potri.009G109100 Populus trichocarpa
Potri.016G068000 Populus trichocarpa
Pp3c17_11290 Physcomitrium patens
Pp3c20_17219 Physcomitrium patens
Pp3c27_2380 Physcomitrium patens
PRCOL_00000132 Prasinoderma coloniale
PRCOL_00006747 Prasinoderma coloniale
Prupe.7G092600 Prunus persica
Prupe.8G112600 Prunus persica
Prupe.8G113200 Prunus persica
Psat1g039160 Pisum sativum
Psat2g085760 Pisum sativum
Psat5g239440 Pisum sativum
Psat5g295360 Pisum sativum
Psat6g129200 Pisum sativum
Psat7g207880 Pisum sativum
PSO339G0170 Papaver somniferum
PSO339G4941 Papaver somniferum
PSO384G1516 Papaver somniferum
PSO384G3059 Papaver somniferum
PSO541G4228 Papaver somniferum
PSO675G8131 Papaver somniferum
QL01p019344 Quercus lobata
QL07p027331 Quercus lobata
QL11p039126 Quercus lobata
QL11p039238 Quercus lobata
RcHm_v2.0_Chr0c32g0501541 Rosa chinensis
RcHm_v2.0_Chr1g0326381 Rosa chinensis
RcHm_v2.0_Chr1g0343841 Rosa chinensis
RcHm_v2.0_Chr2g0161561 Rosa chinensis
RcHm_v2.0_Chr3g0476431 Rosa chinensis
RcHm_v2.0_Chr3g0487051 Rosa chinensis
RcHm_v2.0_Chr4g0411221 Rosa chinensis
RcHm_v2.0_Chr5g0032531 Rosa chinensis
RcHm_v2.0_Chr5g0056261 Rosa chinensis
RcHm_v2.0_Chr6g0259741 Rosa chinensis
RcHm_v2.0_Chr6g0259971 Rosa chinensis
RcHm_v2.0_Chr6g0260171 Rosa chinensis
RcHm_v2.0_Chr6g0260501 Rosa chinensis
RcHm_v2.0_Chr6g0260511 Rosa chinensis
RcHm_v2.0_Chr6g0260771 Rosa chinensis
RcHm_v2.0_Chr6g0271161 Rosa chinensis
RcHm_v2.0_Chr7g0226741 Rosa chinensis
Rhsim03G0063400 Rhododendron simsii
Rhsim11G0170200 Rhododendron simsii
Sabra04G0097000 Salix brachista
Sabra09G0083300 Salix brachista
Sabra16G0069100 Salix brachista
SalBow1G0292 Salvia bowleyana
SalBow1G2055 Salvia bowleyana
SalBow1G5216 Salvia bowleyana
SalBow3G1216 Salvia bowleyana
SalBow5G1173 Salvia bowleyana
SalBow6G1872 Salvia bowleyana
Sc01g0005430 Simmondsia chinensis
Sc07g0006400 Simmondsia chinensis
Sc14g0001710 Simmondsia chinensis
Sc18g0004940 Simmondsia chinensis
Sed0000118 Sechium edule
Sed0015994 Sechium edule
Sed0020808 Sechium edule
Sed0020901 Sechium edule
Sed0024930 Sechium edule
SEGI_13681 Sequoiadendron giganteum
SEGI_36940 Sequoiadendron giganteum
SGA_v2.0_scaffold184G40033 Striga asiatica
SGA_v2.0_scaffold32G13130 Striga asiatica
SGA_v2.0_scaffold41G15767 Striga asiatica
SHI05448 Sapria himalayana
SMO111G0193 Selaginella moellendorffii
SMO145G0133 Selaginella moellendorffii
SMO164G0235 Selaginella moellendorffii
SMO169G0006 Selaginella moellendorffii
Solyc01g109070.2 Solanum lycopersicum
Solyc10g050450.2 Solanum lycopersicum
Solyc10g081820.3 Solanum lycopersicum
Sopen01g051270 Solanum pennellii
Sopen10g022100 Solanum pennellii
Sopen10g032340 Solanum pennellii
Sp3g10020 Schrenkiella parvula
Sp3g29220 Schrenkiella parvula
Sp3g29230 Schrenkiella parvula
Sp5g17210 Schrenkiella parvula
TAR369G1041 Trochodendron aralioides
TAR623G0620 Trochodendron aralioides
TAR628G0822 Trochodendron aralioides
TAR633G2022 Trochodendron aralioides
THA.LOC104804369 Tarenaya hassleriana
THA.LOC104807341 Tarenaya hassleriana
THA.LOC104809944 Tarenaya hassleriana
THA.LOC104810937 Tarenaya hassleriana
THA.LOC104819597 Tarenaya hassleriana
Thecc.02G028600 Theobroma cacao
Thecc.02G093300 Theobroma cacao
Thecc.05G107300 Theobroma cacao
Thecc.09G270700 Theobroma cacao
Thhalv10010660m.g Eutrema salsugineum
Thhalv10021362m.g Eutrema salsugineum
Thhalv10023083m.g Eutrema salsugineum
TPR.G10235 Trifolium pratense
TPR.G10237 Trifolium pratense
TPR.G25335 Trifolium pratense
TWI38G0580 Tripterygium wilfordii
TWI38G1937 Tripterygium wilfordii
TWI53G1576 Tripterygium wilfordii
TWI74G0309 Tripterygium wilfordii
TWI79G0513 Tripterygium wilfordii
unitig_21.g20760 Utricularia gibba
unitig_22.g5152 Utricularia gibba
unitig_60.g25449 Utricularia gibba
vmacro02166 Vaccinium macrocarpon
vmacro07489 Vaccinium macrocarpon
VMungo0720G1842 Vigna mungo
VMungo1127G0583 Vigna mungo
VMungo1127G0680 Vigna mungo
Zm00001eb050310 Zea mays
Zm00001eb213330 Zea mays
Zm00001eb218600 Zea mays
Zm00001eb274880 Zea mays
Zm00001eb389160 Zea mays

User provided reference genes

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