Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p44550 Brassica napus
A05p00420 Brassica napus
A07p34830 Brassica napus
A08p26890 Brassica napus
A09p10060 Brassica napus
A09p39250 Brassica napus
Aa31LG1G14900 Aethionema arabicum
Aa31LG1G28800 Aethionema arabicum
Aa31LG5G12800 Aethionema arabicum
Aa31LG7G9110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4070 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3150 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4465 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_290.6 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1742 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2159 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2192 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_67.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_83.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_83.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_83.5 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_84.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_84.2 Anthoceros agrestis
Actinidia15062 Actinidia chinensis
Actinidia19221 Actinidia chinensis
Actinidia21021 Actinidia chinensis
Actinidia25826 Actinidia chinensis
Actinidia38368 Actinidia chinensis
Ah.03g138330 Amaranthus hybridus
Ah.03g141810 Amaranthus hybridus
AL1G39940 Arabidopsis lyrata
AL4G47060 Arabidopsis lyrata
AL7G49580 Arabidopsis lyrata
AL8G45150 Arabidopsis lyrata
Aqoxy2G02853 Aquilegia oxysepala
Aqoxy3G03967 Aquilegia oxysepala
Aqoxy5G01539 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33L6CA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.626Q4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FKP2UG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GBA1RV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GLEC2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MT9CUS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6M1B4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VM8KEN Arachis hypogaea
AT1G25380 Arabidopsis thaliana
AT2G47490 Arabidopsis thaliana
AT5G66380 Arabidopsis thaliana
ATR0706G189 Amborella trichopoda
ATR0794G093 Amborella trichopoda
ATR1125G094 Amborella trichopoda
Atru.chr11.180 Acer truncatum
Atru.chr3.731 Acer truncatum
Atru.chr5.1079 Acer truncatum
Atru.ctg1436.22 Acer truncatum
AUR62002829 Chenopodium quinoa
AUR62004109 Chenopodium quinoa
AUR62007623 Chenopodium quinoa
AUR62008730 Chenopodium quinoa
AUR62025507 Chenopodium quinoa
AUR62037292 Chenopodium quinoa
BcaB02g08766 Brassica carinata
BcaB03g12030 Brassica carinata
BcaB03g12408 Brassica carinata
BcaB03g15808 Brassica carinata
BcaB06g29440 Brassica carinata
BcaB07g29668 Brassica carinata
BcaC01g01686 Brassica carinata
BcaC02g06978 Brassica carinata
BcaC03g18416 Brassica carinata
BcaC03g18422 Brassica carinata
BcaC05g26469 Brassica carinata
BcaC05g26673 Brassica carinata
BcaC08g46283 Brassica carinata
BcaC08g46287 Brassica carinata
BcaNung04506 Brassica carinata
BcaNung05276 Brassica carinata
BcaNung05280 Brassica carinata
BolC2t12553H Brassica oleracea
BolC3t19598H Brassica oleracea
BolC4t21683H Brassica oleracea
BolC4t28765H Brassica oleracea
BolC5t31245H Brassica oleracea
BolC6t36535H Brassica oleracea
BolC6t39270H Brassica oleracea
BolC9t54080H Brassica oleracea
BraA02t09371Z Brassica rapa
BraA05t19040Z Brassica rapa
BraA07t31101Z Brassica rapa
BraA08t34636Z Brassica rapa
BraA09t36649Z Brassica rapa
BraA09t39425Z Brassica rapa
C02p64950 Brassica napus
C03p73000 Brassica napus
C04p00330 Brassica napus
C04p00380 Brassica napus
C04p72840 Brassica napus
C05p25130 Brassica napus
C06p13650 Brassica napus
C06p40170 Brassica napus
C06p41540 Brassica napus
C09p11920 Brassica napus
CAN.G206.221 Capsicum annuum
CAN.G358.26 Capsicum annuum
CAN.G610.40 Capsicum annuum
CAN.G668.38 Capsicum annuum
CANSAT01G0735 Cannabis sativa
CANSAT01G1443 Cannabis sativa
CANSAT80G2068 Cannabis sativa
CARHR012340 Cardamine hirsuta
CARHR026100 Cardamine hirsuta
CARHR142890 Cardamine hirsuta
CARHR281340 Cardamine hirsuta
Carub.0001s2513 Capsella rubella
Carub.0004s3023 Capsella rubella
Carub.0008s2813 Capsella rubella
Ca_09194_v3 Cicer arietinum L.
Ca_10312_v3 Cicer arietinum L.
Ca_15960_v3 Cicer arietinum L.
Ca_22345_v3 Cicer arietinum L.
CBR_g36596 Chara braunii
Cc01_g21170 Coffea canephora
Cc07_g10110 Coffea canephora
Cc11_g09760 Coffea canephora
CDE04G2213 Ceratophyllum demersum
Cfa005862 Carpinus fangiana
Cfa015854 Carpinus fangiana
Cfa022461 Carpinus fangiana
Cfa024278 Carpinus fangiana
Cfa024679 Carpinus fangiana
Cfa024829 Carpinus fangiana
Cfa025940 Carpinus fangiana
Ciclev10015617m.g Citrus clementina
Ciclev10024227m.g Citrus clementina
Ciclev10026117m.g Citrus clementina
CiPaw.05G240900 Carya illinoinensis
CiPaw.07G113200 Carya illinoinensis
CiPaw.08G092500 Carya illinoinensis
CiPaw.08G137700 Carya illinoinensis
ClCG01G005850 Citrullus lanatus
ClCG01G019970 Citrullus lanatus
ClCG09G005470 Citrullus lanatus
COL.COLO4_21999 Corchorus olitorius
COL.COLO4_23294 Corchorus olitorius
COL.COLO4_35874 Corchorus olitorius
COL.COLO4_35875 Corchorus olitorius
Cpa.g.sc151.39 Carica papaya
Cpa.g.sc6.183 Carica papaya
Cpa.g.sc65.56 Carica papaya
Cre04.g217913 Chlamydomonas reinhardtii
Cre16.g650200 Chlamydomonas reinhardtii
CsaV3_5G028840 Cucumis sativus L.
CsaV3_6G046730 Cucumis sativus L.
CsaV3_7G029630 Cucumis sativus L.
CSS0015094 Camellia sinensis var. sinensis
CSS0023007 Camellia sinensis var. sinensis
CSS0023201 Camellia sinensis var. sinensis
CSS0025421 Camellia sinensis var. sinensis
CSS0029948 Camellia sinensis var. sinensis
CSS0034160 Camellia sinensis var. sinensis
CSS0036283 Camellia sinensis var. sinensis
CSS0037221 Camellia sinensis var. sinensis
CSS0038760 Camellia sinensis var. sinensis
CSS0040366 Camellia sinensis var. sinensis
CSS0040465 Camellia sinensis var. sinensis
CSS0049987 Camellia sinensis var. sinensis
DCAR_005780 Daucus carota
DCAR_007259 Daucus carota
DCAR_023632 Daucus carota
DCAR_025976 Daucus carota
Dinv10048 Davidia involucrata
Dinv16121 Davidia involucrata
Dinv31607 Davidia involucrata
Dinv33084 Davidia involucrata
Dinv40033 Davidia involucrata
Duzib133G1292 Durio zibethinus
Duzib138G1131 Durio zibethinus
Duzib251G0765 Durio zibethinus
Duzib264G1017 Durio zibethinus
Duzib268G0362 Durio zibethinus
ECA233G4593 Erigeron canadensis
ECA238G0539 Erigeron canadensis
ECA246G2099 Erigeron canadensis
ECA246G5226 Erigeron canadensis
ECA248G1545 Erigeron canadensis
EL10Ac6g14326 Beta vulgaris
EL10Ac7g17586 Beta vulgaris
EL10As8g23884 Beta vulgaris
Eucgr.B02821 Eucalyptus grandis
Eucgr.B02990 Eucalyptus grandis
Eucgr.B02991 Eucalyptus grandis
Eucgr.D01095 Eucalyptus grandis
Eucgr.D01096 Eucalyptus grandis
FAN07G1967 Fragaria x ananassa
FAN12G1244 Fragaria x ananassa
FAN12G3035 Fragaria x ananassa
FAN17G2912 Fragaria x ananassa
FAN19G2141 Fragaria x ananassa
FAN22G1468 Fragaria x ananassa
FAN23G2952 Fragaria x ananassa
FAN26G2838 Fragaria x ananassa
FAN28G0074 Fragaria x ananassa
FvH4_1g12470 Fragaria vesca
FvH4_4g26870 Fragaria vesca
Glyma.02G052400 Glycine max
Glyma.03G217100 Glycine max
Glyma.09G116900 Glycine max
Glyma.16G132600 Glycine max
Glyma.19G073600 Glycine max
Glyma.19G213700 Glycine max
Gohir.A02G167901 Gossypium hirsutum
Gohir.A07G126600 Gossypium hirsutum
Gohir.A10G096600 Gossypium hirsutum
Gohir.A12G052000 Gossypium hirsutum
Gohir.D03G012100 Gossypium hirsutum
Gohir.D07G130700 Gossypium hirsutum
Gohir.D10G091500 Gossypium hirsutum
Gohir.D12G050300 Gossypium hirsutum
Gorai.001G141500 Gossypium raimondii
Gorai.008G053500 Gossypium raimondii
Gorai.011G100500 Gossypium raimondii
GSVIVG01011852001 Vitis vinifera
GSVIVG01018862001 Vitis vinifera
GSVIVG01028063001 Vitis vinifera
HanXRQChr01g0000921 Helianthus annuus
HanXRQChr07g0190381 Helianthus annuus
HanXRQChr11g0340981 Helianthus annuus
HanXRQChr14g0441441 Helianthus annuus
Haze_00643 Corylus avellana
Haze_03839 Corylus avellana
Haze_04986 Corylus avellana
Haze_26132 Corylus avellana
Haze_26470 Corylus avellana
Haze_26877 Corylus avellana
Hma1.2p1_0212F.1_g090210 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165540 Hydrangea macrophylla
Hma1.2p1_0913F.1_g235990 Hydrangea macrophylla
Hma1.2p1_1649F.1_g295610 Hydrangea macrophylla
HPP92_000172 Vanilla planifolia
HPP92_001066 Vanilla planifolia
HPP92_002017 Vanilla planifolia
HPP92_024345 Vanilla planifolia
Hund05457 Selenicereus undatus
Hund14011 Selenicereus undatus
Hund18239 Selenicereus undatus
Hund20759 Selenicereus undatus
Hund25042 Selenicereus undatus
Lalb_Chr02g0146571 Lupinus albus
Lalb_Chr04g0259881 Lupinus albus
Lalb_Chr05g0229971 Lupinus albus
Lalb_Chr10g0100111 Lupinus albus
Lalb_Chr18g0046851 Lupinus albus
Lalb_Chr21g0309381 Lupinus albus
Lalb_Chr21g0309391 Lupinus albus
Lj1g0010312 Lotus japonicus
Lj2A1200T75 Lonicera japonica
Lj2C460G5 Lonicera japonica
Lj2g0009075 Lotus japonicus
Lj2g0020700 Lotus japonicus
Lj3A880T120 Lonicera japonica
Lj4A210T32 Lonicera japonica
Lj4g0019915 Lotus japonicus
Lsat_1_v5_gn_2_78080 Lactuca sativa
Lsat_1_v5_gn_3_62580 Lactuca sativa
Lsat_1_v5_gn_3_75020 Lactuca sativa
Lsat_1_v5_gn_8_40161 Lactuca sativa
Lsat_1_v5_gn_9_421 Lactuca sativa
Manes.01G140400 Manihot esculenta
Manes.01G223500 Manihot esculenta
Manes.05G000500 Manihot esculenta
Manes.14G105700 Manihot esculenta
Mapoly0015s0117 Marchantia polymorpha
Mapoly0016s0132 Marchantia polymorpha
Mapoly0045s0120 Marchantia polymorpha
MBI11_g07618_MAGBIO Magnolia biondii
MBI11_g07619_MAGBIO Magnolia biondii
MBI16_g40050_MAGBIO Magnolia biondii
MBI18_g44491_MAGBIO Magnolia biondii
MCO02G045 Micromonas commoda
MCO16G583 Micromonas commoda
MD02G1138700 Malus domestica
MD13G1036400 Malus domestica
MD16G1039000 Malus domestica
Medtr1g087840 Medicago truncatula
Medtr5g055410 Medicago truncatula
Medtr7g109135 Medicago truncatula
Medtr8g076690 Medicago truncatula
Medtr8g076700 Medicago truncatula
Medtr8g076740 Medicago truncatula
Medtr8g076760 Medicago truncatula
MELO3C001466.2 Cucumis melo
MELO3C004999.2 Cucumis melo
MELO3C005344.2 Cucumis melo
MELO3C015958.2 Cucumis melo
Migut.D00119 Erythranthe guttata
Migut.H02507 Erythranthe guttata
Migut.L01036 Erythranthe guttata
MSTRG.12611 Avicennia marina
MSTRG.21659 Avicennia marina
MSTRG.2494 Avicennia marina
MSTRG.859 Avicennia marina
Nitab4.5_0000116g0260 Nicotiana tabacum
Nitab4.5_0000694g0010 Nicotiana tabacum
Nitab4.5_0000723g0120 Nicotiana tabacum
Nitab4.5_0001944g0050 Nicotiana tabacum
Nitab4.5_0004708g0060 Nicotiana tabacum
Nitab4.5_0005528g0020 Nicotiana tabacum
Nn3g17929 Nelumbo nucifera
Nn3g21590 Nelumbo nucifera
Nn4g23931 Nelumbo nucifera
Nn5g29718 Nelumbo nucifera
Oeu002028.1 Olea europaea
Oeu006452.1 Olea europaea
Oeu008334.2 Olea europaea
Oeu008335.1 Olea europaea
Oeu011474.1 Olea europaea
Oeu035594.1 Olea europaea
Oeu053817.2 Olea europaea
Os01g0513200 Oryza sativa ssp. japonica
Os03g0734700 Oryza sativa ssp. japonica
Os05g0357200 Oryza sativa ssp. japonica
Peaxi162Scf00001g03323 Petunia axillaris
Peaxi162Scf00084g01018 Petunia axillaris
Peaxi162Scf00179g00215 Petunia axillaris
PGR102G2174 Punica granatum
PGR102G2239 Punica granatum
PGR119G1848 Punica granatum
PGSC0003DMG400003534 Solanum tuberosum
PGSC0003DMG400030576 Solanum tuberosum
Phvul.001G210600 Phaseolus vulgaris
Phvul.003G029900 Phaseolus vulgaris
Phvul.003G257600 Phaseolus vulgaris
Phvul.003G257800 Phaseolus vulgaris
Potri.002G200900 Populus trichocarpa
Potri.007G019000 Populus trichocarpa
Potri.008G123700 Populus trichocarpa
Potri.010G121500 Populus trichocarpa
Potri.014G125600 Populus trichocarpa
Pp3c10_15900 Physcomitrium patens
Pp3c16_15070 Physcomitrium patens
Pp3c1_23190 Physcomitrium patens
Pp3c2_22480 Physcomitrium patens
PRCOL_00001123 Prasinoderma coloniale
Prupe.1G315700 Prunus persica
Prupe.7G162200 Prunus persica
Prupe.8G267400 Prunus persica
Psat2g087880 Pisum sativum
Psat4g096400 Pisum sativum
Psat4g096520 Pisum sativum
Psat4g096560 Pisum sativum
Psat5g094320 Pisum sativum
Psat6g163600 Pisum sativum
PSO063G6071 Papaver somniferum
PSO170G2614 Papaver somniferum
PSO170G2827 Papaver somniferum
PSO170G3066 Papaver somniferum
PSO210G6386 Papaver somniferum
PSO357G0081 Papaver somniferum
PSO445G0001 Papaver somniferum
PSO782G0094 Papaver somniferum
QL01p040318 Quercus lobata
QL06p034902 Quercus lobata
QL10p007477 Quercus lobata
QL12p028636 Quercus lobata
RcHm_v2.0_Chr2g0100341 Rosa chinensis
RcHm_v2.0_Chr4g0434631 Rosa chinensis
Rhsim01G0287900 Rhododendron simsii
Rhsim08G0123300 Rhododendron simsii
Rhsim12G0085800 Rhododendron simsii
Sabra02G0157900 Salix brachista
Sabra07G0016300 Salix brachista
Sabra10G0091500 Salix brachista
Sabra14G0093400 Salix brachista
SalBow2G0255 Salvia bowleyana
SalBow6G2326 Salvia bowleyana
SalBow8G3347 Salvia bowleyana
SalBow8G4389 Salvia bowleyana
SalBow8G5134 Salvia bowleyana
Sc03g0003240 Simmondsia chinensis
Sc04g0006100 Simmondsia chinensis
Sc05g0003380 Simmondsia chinensis
Sed0002837 Sechium edule
Sed0018906 Sechium edule
Sed0026853 Sechium edule
Sed0027106 Sechium edule
SEGI_04727 Sequoiadendron giganteum
SEGI_04757 Sequoiadendron giganteum
SEGI_32686 Sequoiadendron giganteum
SEGI_38312 Sequoiadendron giganteum
SEGI_38901 Sequoiadendron giganteum
SEGI_40694 Sequoiadendron giganteum
SEGI_41526 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29914 Striga asiatica
SGA_v2.0_scaffold334G49032 Striga asiatica
SGA_v2.0_scaffold36G14328 Striga asiatica
SGA_v2.0_scaffold36G14558 Striga asiatica
SGA_v2.0_scaffold38G14975 Striga asiatica
SGA_v2.0_scaffold51G18797 Striga asiatica
SHI04443 Sapria himalayana
SMO119G0073 Selaginella moellendorffii
SMO164G0154 Selaginella moellendorffii
SMO337G0108 Selaginella moellendorffii
Solyc02g084770.3 Solanum lycopersicum
Solyc02g088770.3 Solanum lycopersicum
Solyc05g009020.4 Solanum lycopersicum
Solyc09g075490.4 Solanum lycopersicum
Sopen02g029440 Solanum pennellii
Sopen02g033480 Solanum pennellii
Sopen05g004760 Solanum pennellii
Sopen09g030290 Solanum pennellii
Sp1g22840 Schrenkiella parvula
Sp2g30400 Schrenkiella parvula
Sp4g29430 Schrenkiella parvula
Sp5g23490 Schrenkiella parvula
TAR365G1001 Trochodendron aralioides
TAR622G1074 Trochodendron aralioides
TAR622G1205 Trochodendron aralioides
TAR625G0100 Trochodendron aralioides
TAR636G3636 Trochodendron aralioides
THA.LOC104802189 Tarenaya hassleriana
THA.LOC104808284 Tarenaya hassleriana
THA.LOC104821307 Tarenaya hassleriana
THA.LOC104827662 Tarenaya hassleriana
THA.LOC104827673 Tarenaya hassleriana
THA.LOC104827704 Tarenaya hassleriana
Thecc.01G027000 Theobroma cacao
Thecc.01G307000 Theobroma cacao
Thecc.02G223400 Theobroma cacao
Thhalv10001547m.g Eutrema salsugineum
Thhalv10004659m.g Eutrema salsugineum
Thhalv10007992m.g Eutrema salsugineum
TPR.G12699 Trifolium pratense
TPR.G21527 Trifolium pratense
TPR.G21538 Trifolium pratense
TPR.G21550 Trifolium pratense
TPR.G33997 Trifolium pratense
TPR.G38269 Trifolium pratense
TPR.G7379 Trifolium pratense
TPR.G9611 Trifolium pratense
TWI23G0237 Tripterygium wilfordii
TWI31G0670 Tripterygium wilfordii
TWI53G1062 Tripterygium wilfordii
TWI59G0542 Tripterygium wilfordii
TWI79G0402 Tripterygium wilfordii
unitig_26.g10254 Utricularia gibba
unitig_61.g26299 Utricularia gibba
unitig_61.g26354 Utricularia gibba
vmacro01394 Vaccinium macrocarpon
vmacro15131 Vaccinium macrocarpon
vmacro17725 Vaccinium macrocarpon
VMungo0251G3319 Vigna mungo
VMungo0251G3431 Vigna mungo
VMungo1215G2087 Vigna mungo
VMungo1383G3311 Vigna mungo
Zm00001eb215470 Zea mays
Zm00001eb285930 Zea mays
Zm00001eb347430 Zea mays

User provided reference genes

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