Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22800 Brassica napus
A01p32440 Brassica napus
A01p32460 Brassica napus
A03p18400 Brassica napus
A03p33880 Brassica napus
A03p42940 Brassica napus
A05p25970 Brassica napus
A05p25980 Brassica napus
Aa31LG5G15240 Aethionema arabicum
Aa31LG7G10330 Aethionema arabicum
Aa31LG7G10350 Aethionema arabicum
Aa31LG7G10360 Aethionema arabicum
Aa31LG7G10370 Aethionema arabicum
Aa31LG8G9260 Aethionema arabicum
Aa31LG8G9270 Aethionema arabicum
Aa31LG9G2600 Aethionema arabicum
Aa31sc16G260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2297 Anthoceros agrestis
Actinidia02742 Actinidia chinensis
Actinidia08472 Actinidia chinensis
Actinidia14619 Actinidia chinensis
Actinidia15685 Actinidia chinensis
Actinidia18534 Actinidia chinensis
Actinidia22364 Actinidia chinensis
Actinidia22365 Actinidia chinensis
Actinidia23533 Actinidia chinensis
Actinidia40126 Actinidia chinensis
Ah.07g204170 Amaranthus hybridus
Ah.10g026240 Amaranthus hybridus
Ah.10g026250 Amaranthus hybridus
Ah.13g071640 Amaranthus hybridus
AL3G15020 Arabidopsis lyrata
AL3G37090 Arabidopsis lyrata
AL3G37100 Arabidopsis lyrata
AL7G41150 Arabidopsis lyrata
Aqoxy2G03440 Aquilegia oxysepala
Aqoxy7G03750 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.79SPSS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AYCM5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B88PIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E09QVI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HR1TS1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IK82S7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1VVLX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNN77U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8MZ5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SA7CU8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VMK2JT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VYSW4B Arachis hypogaea
AT3G04850 Arabidopsis thaliana
AT3G22760 Arabidopsis thaliana
AT3G22780 Arabidopsis thaliana
AT4G14770 Arabidopsis thaliana
ATR0665G509 Amborella trichopoda
ATR0815G037 Amborella trichopoda
Atru.chr1.3107 Acer truncatum
Atru.chr2.777 Acer truncatum
Atru.chr4.2387 Acer truncatum
Atru.chr4.2410 Acer truncatum
Atru.chr7.2383 Acer truncatum
AUR62001045 Chenopodium quinoa
AUR62004910 Chenopodium quinoa
AUR62024885 Chenopodium quinoa
AUR62030662 Chenopodium quinoa
AUR62033646 Chenopodium quinoa
BcaB01g03957 Brassica carinata
BcaB03g14650 Brassica carinata
BcaB04g19291 Brassica carinata
BcaB04g20501 Brassica carinata
BcaB06g26391 Brassica carinata
BcaB06g26393 Brassica carinata
BcaC01g03427 Brassica carinata
BcaC01g05880 Brassica carinata
BcaC05g28016 Brassica carinata
BcaC05g28017 Brassica carinata
BcaC09g49193 Brassica carinata
BcaNung00334 Brassica carinata
BcaNung00335 Brassica carinata
BolC1t02766H Brassica oleracea
BolC1t04111H Brassica oleracea
BolC3t14535H Brassica oleracea
BolC3t16408H Brassica oleracea
BolC3t17537H Brassica oleracea
BolC3t17538H Brassica oleracea
BolC3t17540H Brassica oleracea
BolC5t32774H Brassica oleracea
BolC5t32775H Brassica oleracea
BraA01t02192Z Brassica rapa
BraA01t03374Z Brassica rapa
BraA01t03376Z Brassica rapa
BraA03t12562Z Brassica rapa
BraA03t13438Z Brassica rapa
BraA05t21481Z Brassica rapa
BraA05t21482Z Brassica rapa
C01p28370 Brassica napus
C01p41570 Brassica napus
C01p41620 Brassica napus
C03p41220 Brassica napus
C03p52690 Brassica napus
C05p40330 Brassica napus
C05p40340 Brassica napus
CAN.G1402.8 Capsicum annuum
CAN.G606.3 Capsicum annuum
CAN.G98.30 Capsicum annuum
CANSAT56G2801 Cannabis sativa
CANSAT78G1873 Cannabis sativa
CANSAT78G2374 Cannabis sativa
CARHR079110 Cardamine hirsuta
CARHR079120 Cardamine hirsuta
CARHR098610 Cardamine hirsuta
CARHR098620 Cardamine hirsuta
CARHR148840 Cardamine hirsuta
CARHR216030 Cardamine hirsuta
CARHR221300 Cardamine hirsuta
CARHR221310 Cardamine hirsuta
Carub.0003s0404 Capsella rubella
Carub.0003s2289 Capsella rubella
Carub.0003s2290 Capsella rubella
Carub.0007s2737 Capsella rubella
Ca_12933_v3 Cicer arietinum L.
Ca_24408_v3 Cicer arietinum L.
CBR_g38866 Chara braunii
Cc03_g04130 Coffea canephora
Cc11_g01890 Coffea canephora
CDE01G0162 Ceratophyllum demersum
CDE01G0456 Ceratophyllum demersum
CDE03G0048 Ceratophyllum demersum
Cfa008460 Carpinus fangiana
Cfa013173 Carpinus fangiana
Ciclev10001376m.g Citrus clementina
Ciclev10004441m.g Citrus clementina
Ciclev10007369m.g Citrus clementina
Ciclev10027242m.g Citrus clementina
CiPaw.01G197300 Carya illinoinensis
CiPaw.01G243900 Carya illinoinensis
CiPaw.02G122500 Carya illinoinensis
CiPaw.08G013000 Carya illinoinensis
ClCG05G004950 Citrullus lanatus
ClCG06G006360 Citrullus lanatus
ClCG07G012830 Citrullus lanatus
ClCG08G013160 Citrullus lanatus
COL.COLO4_12886 Corchorus olitorius
COL.COLO4_15295 Corchorus olitorius
COL.COLO4_21540 Corchorus olitorius
COL.COLO4_23979 Corchorus olitorius
Cpa.g.sc115.13 Carica papaya
Cpa.g.sc115.16 Carica papaya
Cpa.g.sc264.4 Carica papaya
Cpa.g.sc264.5 Carica papaya
Cpa.g.sc58.61 Carica papaya
Cre12.g550250 Chlamydomonas reinhardtii
CsaV3_2G013550 Cucumis sativus L.
CsaV3_3G013010 Cucumis sativus L.
CsaV3_4G001360 Cucumis sativus L.
CSS0000128 Camellia sinensis var. sinensis
CSS0023252 Camellia sinensis var. sinensis
CSS0027132 Camellia sinensis var. sinensis
CSS0027734 Camellia sinensis var. sinensis
DCAR_002372 Daucus carota
DCAR_024178 Daucus carota
DCAR_027236 Daucus carota
Dinv11533 Davidia involucrata
Dinv11622 Davidia involucrata
Dinv14032 Davidia involucrata
Dinv17768 Davidia involucrata
Dinv30170 Davidia involucrata
Dinv44564 Davidia involucrata
Duzib128G0637 Durio zibethinus
Duzib150G0799 Durio zibethinus
Duzib151G0531 Durio zibethinus
Duzib187G1050 Durio zibethinus
Duzib192G0517 Durio zibethinus
Duzib212G0525 Durio zibethinus
ECA234G1550 Erigeron canadensis
ECA234G2406 Erigeron canadensis
ECA246G3351 Erigeron canadensis
EL10Ac2g02597 Beta vulgaris
EL10Ac2g04204 Beta vulgaris
EL10Ac3g06473 Beta vulgaris
EL10Ac4g09092 Beta vulgaris
Eucgr.B01031 Eucalyptus grandis
Eucgr.C02811 Eucalyptus grandis
Eucgr.H03425 Eucalyptus grandis
FAN02G1631 Fragaria x ananassa
FAN05G0524 Fragaria x ananassa
FAN05G2180 Fragaria x ananassa
FAN05G3565 Fragaria x ananassa
FAN05G3742 Fragaria x ananassa
FAN09G0345 Fragaria x ananassa
FAN09G1563 Fragaria x ananassa
FAN09G4288 Fragaria x ananassa
FAN12G0899 Fragaria x ananassa
FAN14G5711 Fragaria x ananassa
FAN15G0716 Fragaria x ananassa
FAN17G3066 Fragaria x ananassa
FAN20G1969 Fragaria x ananassa
FAN22G2403 Fragaria x ananassa
FAN24G1377 Fragaria x ananassa
FvH4_2g29570 Fragaria vesca
FvH4_4g00820 Fragaria vesca
FvH4_6g03350 Fragaria vesca
FvH4_6g30420 Fragaria vesca
Glyma.01G236300 Glycine max
Glyma.10G245500 Glycine max
Glyma.11G006900 Glycine max
Glyma.17G208500 Glycine max
Glyma.18G224100 Glycine max
Glyma.20G149100 Glycine max
Gohir.A02G033800 Gossypium hirsutum
Gohir.A02G112600 Gossypium hirsutum
Gohir.A11G254450 Gossypium hirsutum
Gohir.A13G105000 Gossypium hirsutum
Gohir.A13G206800 Gossypium hirsutum
Gohir.D02G040400 Gossypium hirsutum
Gohir.D03G060612 Gossypium hirsutum
Gohir.D11G264201 Gossypium hirsutum
Gohir.D13G108200 Gossypium hirsutum
Gohir.D13G211400 Gossypium hirsutum
Gorai.005G044800 Gossypium raimondii
Gorai.006G016100 Gossypium raimondii
Gorai.007G284200 Gossypium raimondii
Gorai.013G110900 Gossypium raimondii
Gorai.013G121300 Gossypium raimondii
Gorai.013G241500 Gossypium raimondii
GSVIVG01017242001 Vitis vinifera
GSVIVG01018021001 Vitis vinifera
GSVIVG01021837001 Vitis vinifera
GSVIVG01035818001 Vitis vinifera
HanXRQChr08g0234931 Helianthus annuus
HanXRQChr10g0294761 Helianthus annuus
HanXRQChr16g0513781 Helianthus annuus
Haze_04335 Corylus avellana
Haze_11214 Corylus avellana
Haze_16508 Corylus avellana
Haze_21558 Corylus avellana
Hma1.2p1_0000F.1_g000630 Hydrangea macrophylla
Hma1.2p1_0549F.1_g176810 Hydrangea macrophylla
Hma1.2p1_0602F.1_g187530 Hydrangea macrophylla
HPP92_005158 Vanilla planifolia
HPP92_008655 Vanilla planifolia
HPP92_018613 Vanilla planifolia
HPP92_021807 Vanilla planifolia
HPP92_028014 Vanilla planifolia
HPP92_028015 Vanilla planifolia
Hund06954 Selenicereus undatus
Hund12096 Selenicereus undatus
Hund22129 Selenicereus undatus
Hund25727 Selenicereus undatus
Lalb_Chr05g0211051 Lupinus albus
Lalb_Chr09g0319961 Lupinus albus
Lalb_Chr14g0361901 Lupinus albus
Lalb_Chr22g0361531 Lupinus albus
Lalb_Chr24g0402241 Lupinus albus
Lj1g0019955 Lotus japonicus
Lj3A729G50 Lonicera japonica
Lj5g0003410 Lotus japonicus
Lj5g0003828 Lotus japonicus
Lj6C610G1 Lonicera japonica
Lj7A719T45 Lonicera japonica
LjContig00408g0005420 Lotus japonicus
Lsat_1_v5_gn_5_104381 Lactuca sativa
Lsat_1_v5_gn_5_31600 Lactuca sativa
Lsat_1_v5_gn_6_22281 Lactuca sativa
Lsat_1_v5_gn_6_22300 Lactuca sativa
Manes.03G174900 Manihot esculenta
Manes.04G117200 Manihot esculenta
Manes.09G155000 Manihot esculenta
Manes.15G031500 Manihot esculenta
Manes.16G119900 Manihot esculenta
Mapoly0023s0118 Marchantia polymorpha
MBI04_g10415_MAGBIO Magnolia biondii
MBI05_g27523_MAGBIO Magnolia biondii
MD04G1221400 Malus domestica
MD04G1221500 Malus domestica
MD08G1145800 Malus domestica
MD12G1237500 Malus domestica
MD13G1197800 Malus domestica
MD15G1121200 Malus domestica
MD16G1197800 Malus domestica
Medtr1g012000 Medicago truncatula
Medtr1g012020 Medicago truncatula
Medtr1g103180 Medicago truncatula
Medtr1g103230 Medicago truncatula
Medtr2g049305 Medicago truncatula
Medtr5g006530 Medicago truncatula
MELO3C006510.2 Cucumis melo
MELO3C014295.2 Cucumis melo
MELO3C032864.2 Cucumis melo
Migut.A00318 Erythranthe guttata
Migut.A00320 Erythranthe guttata
Migut.A00323 Erythranthe guttata
Migut.A00324 Erythranthe guttata
Migut.E01274 Erythranthe guttata
Migut.E01471 Erythranthe guttata
Migut.G00370 Erythranthe guttata
Migut.N00204 Erythranthe guttata
MSTRG.21868 Avicennia marina
MSTRG.25850 Avicennia marina
MSTRG.4051 Avicennia marina
MSTRG.9962 Avicennia marina
Nitab4.5_0000085g0300 Nicotiana tabacum
Nitab4.5_0000151g0130 Nicotiana tabacum
Nitab4.5_0002406g0010 Nicotiana tabacum
Nitab4.5_0009006g0010 Nicotiana tabacum
Nn1g02402 Nelumbo nucifera
Nn2g11942 Nelumbo nucifera
Nn6g34134 Nelumbo nucifera
Nn8g39374 Nelumbo nucifera
Oeu010307.1 Olea europaea
Oeu020098.1 Olea europaea
Oeu030207.1 Olea europaea
Oeu042813.3 Olea europaea
Oeu043474.3 Olea europaea
Oeu058964.1 Olea europaea
Os03g0638300 Oryza sativa ssp. japonica
Os05g0509400 Oryza sativa ssp. japonica
Os07g0176200 Oryza sativa ssp. japonica
Os12g0605300 Oryza sativa ssp. japonica
Os12g0605500 Oryza sativa ssp. japonica
Peaxi162Scf00245g01214 Petunia axillaris
Peaxi162Scf00341g00027 Petunia axillaris
Peaxi162Scf00520g00614 Petunia axillaris
PGR042G1986 Punica granatum
PGR044G1345 Punica granatum
PGR083G2146 Punica granatum
PGR142G0675 Punica granatum
PGSC0003DMG400023147 Solanum tuberosum
PGSC0003DMG400032257 Solanum tuberosum
Phvul.001G052500 Phaseolus vulgaris
Phvul.002G043700 Phaseolus vulgaris
Phvul.007G060500 Phaseolus vulgaris
Potri.001G173600 Populus trichocarpa
Potri.003G060366 Populus trichocarpa
Potri.003G060432 Populus trichocarpa
Potri.005G051100 Populus trichocarpa
Potri.006G251200 Populus trichocarpa
Potri.008G156100 Populus trichocarpa
Potri.010G083400 Populus trichocarpa
Potri.013G038301 Populus trichocarpa
Potri.018G030000 Populus trichocarpa
Pp3c15_6750 Physcomitrium patens
Pp3c17_2880 Physcomitrium patens
Pp3c9_11130 Physcomitrium patens
Pp3c9_7400 Physcomitrium patens
PRCOL_00005643 Prasinoderma coloniale
Prupe.1G019100 Prunus persica
Prupe.1G473800 Prunus persica
Prupe.3G078800 Prunus persica
Prupe.6G340600 Prunus persica
Psat0s3930g0200 Pisum sativum
Psat2g190640 Pisum sativum
Psat6g029800 Pisum sativum
Psat6g204520 Pisum sativum
Psat6g204560 Pisum sativum
Psat6g204600 Pisum sativum
Psat6g204640 Pisum sativum
Psat7g122280 Pisum sativum
PSO170G0612 Papaver somniferum
PSO170G2064 Papaver somniferum
PSO210G0099 Papaver somniferum
PSO210G7202 Papaver somniferum
PSO455G0156 Papaver somniferum
PSO832G2690 Papaver somniferum
QL02p022416 Quercus lobata
QL03p024809 Quercus lobata
QL04p083316 Quercus lobata
QL05p027578 Quercus lobata
QL06p001413 Quercus lobata
QL06p001419 Quercus lobata
RcHm_v2.0_Chr2g0136761 Rosa chinensis
RcHm_v2.0_Chr4g0387371 Rosa chinensis
RcHm_v2.0_Chr6g0298531 Rosa chinensis
Rhsim02G0028000 Rhododendron simsii
Rhsim04G0199300 Rhododendron simsii
Rhsim07G0147800 Rhododendron simsii
Sabra01G0138200 Salix brachista
Sabra06G0196300 Salix brachista
Sabra08G0118900 Salix brachista
Sabra18G0031800 Salix brachista
SalBow2G0747 Salvia bowleyana
SalBow3G1593 Salvia bowleyana
SalBow6G5001 Salvia bowleyana
Sc13g0004620 Simmondsia chinensis
Sc19g0004020 Simmondsia chinensis
Sc23g0006890 Simmondsia chinensis
Sc25g0004280 Simmondsia chinensis
Sc25g0004290 Simmondsia chinensis
Sed0002062 Sechium edule
Sed0010929 Sechium edule
Sed0011917 Sechium edule
Sed0021302 Sechium edule
Sed0026536 Sechium edule
SEGI_26140 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38612 Striga asiatica
SGA_v2.0_scaffold191G40463 Striga asiatica
SGA_v2.0_scaffold308G48126 Striga asiatica
SGA_v2.0_scaffold4G02183 Striga asiatica
SHI00498 Sapria himalayana
SMO174G0066 Selaginella moellendorffii
SMO367G0944 Selaginella moellendorffii
Solyc08g067150.4 Solanum lycopersicum
Solyc09g082500.4 Solanum lycopersicum
Sopen08g021070 Solanum pennellii
Sopen09g031360 Solanum pennellii
Sp3g20475 Schrenkiella parvula
Sp3g20480 Schrenkiella parvula
Sp7g12900 Schrenkiella parvula
TAR362G0329 Trochodendron aralioides
TAR365G0419 Trochodendron aralioides
TAR383G0201 Trochodendron aralioides
TAR383G1052 Trochodendron aralioides
TAR625G0494 Trochodendron aralioides
THA.LOC104799223 Tarenaya hassleriana
THA.LOC104803136 Tarenaya hassleriana
THA.LOC104808570 Tarenaya hassleriana
THA.LOC104818643 Tarenaya hassleriana
THA.LOC104827552 Tarenaya hassleriana
Thecc.04G236400 Theobroma cacao
Thecc.05G287600 Theobroma cacao
Thecc.06G074200 Theobroma cacao
Thecc.09G149500 Theobroma cacao
Thhalv10020174m.g Eutrema salsugineum
Thhalv10020373m.g Eutrema salsugineum
Thhalv10022166m.g Eutrema salsugineum
Thhalv10024624m.g Eutrema salsugineum
TPR.G15672 Trifolium pratense
TPR.G20373 Trifolium pratense
TPR.G26102 Trifolium pratense
TPR.G26117 Trifolium pratense
TPR.G26118 Trifolium pratense
TPR.G37873 Trifolium pratense
TPR.G37972 Trifolium pratense
TWI09G1240 Tripterygium wilfordii
TWI12G0268 Tripterygium wilfordii
TWI12G0779 Tripterygium wilfordii
TWI12G1411 Tripterygium wilfordii
TWI32G0159 Tripterygium wilfordii
TWI34G1493 Tripterygium wilfordii
TWI53G1527 Tripterygium wilfordii
TWI73G0388 Tripterygium wilfordii
unitig_26.g8952 Utricularia gibba
unitig_52.g17308 Utricularia gibba
unitig_748.g7300 Utricularia gibba
unitig_748.g7301 Utricularia gibba
unitig_748.g7302 Utricularia gibba
unitig_749.g14073 Utricularia gibba
unitig_899.g14872 Utricularia gibba
vmacro05192 Vaccinium macrocarpon
vmacro15363 Vaccinium macrocarpon
VMungo0647G2453 Vigna mungo
VMungo0720G2732 Vigna mungo
VMungo1080G1804 Vigna mungo
VMungo1215G0998 Vigna mungo
Zm00001eb031300 Zea mays
Zm00001eb031310 Zea mays
Zm00001eb050860 Zea mays
Zm00001eb135740 Zea mays
Zm00001eb135750 Zea mays
Zm00001eb292380 Zea mays
Zm00001eb301170 Zea mays
Zm00001eb352860 Zea mays

User provided reference genes

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