Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27480 Brassica napus
A01p27510 Brassica napus
A03p25920 Brassica napus
A03p34790 Brassica napus
A03p66580 Brassica napus
A05p00550 Brassica napus
Aa31LG1G28650 Aethionema arabicum
Aa31LG2G11440 Aethionema arabicum
Aa31LG2G11470 Aethionema arabicum
Aa31LG5G17250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.376 Anthoceros agrestis
Actinidia04184 Actinidia chinensis
Actinidia04185 Actinidia chinensis
Actinidia16859 Actinidia chinensis
Actinidia17907 Actinidia chinensis
Actinidia20989 Actinidia chinensis
Actinidia21395 Actinidia chinensis
Actinidia35519 Actinidia chinensis
Actinidia35520 Actinidia chinensis
Actinidia35521 Actinidia chinensis
Ah.02g112340 Amaranthus hybridus
Ah.04g158660 Amaranthus hybridus
AL1G66140 Arabidopsis lyrata
AL1G66170 Arabidopsis lyrata
AL3G17790 Arabidopsis lyrata
AL4G46910 Arabidopsis lyrata
Aqoxy2G02739 Aquilegia oxysepala
Aqoxy3G00582 Aquilegia oxysepala
Aqoxy7G01123 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0F9TFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6LPS1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI26SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPGA62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QXLP7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1X4YZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2Y4QF Arachis hypogaea
AT1G56440 Arabidopsis thaliana
AT1G56460 Arabidopsis thaliana
AT2G47350 Arabidopsis thaliana
AT3G06660 Arabidopsis thaliana
ATR0796G093 Amborella trichopoda
ATR0796G276 Amborella trichopoda
ATR1152G010 Amborella trichopoda
Atru.chr2.201 Acer truncatum
Atru.chr2.202 Acer truncatum
Atru.chr4.3014 Acer truncatum
Atru.chr4.3015 Acer truncatum
Atru.chr5.981 Acer truncatum
AUR62000388 Chenopodium quinoa
AUR62006743 Chenopodium quinoa
AUR62011794 Chenopodium quinoa
AUR62015660 Chenopodium quinoa
AUR62015688 Chenopodium quinoa
AUR62015693 Chenopodium quinoa
AUR62016120 Chenopodium quinoa
AUR62020511 Chenopodium quinoa
AUR62020541 Chenopodium quinoa
AUR62024641 Chenopodium quinoa
AUR62031620 Chenopodium quinoa
AUR62041392 Chenopodium quinoa
BcaB01g03171 Brassica carinata
BcaB02g08784 Brassica carinata
BcaB04g20162 Brassica carinata
BcaB04g20164 Brassica carinata
BcaB06g29452 Brassica carinata
BcaB08g37047 Brassica carinata
BcaC01g05034 Brassica carinata
BcaC02g10729 Brassica carinata
BcaC05g30550 Brassica carinata
BcaC06g31772 Brassica carinata
BcaC06g32040 Brassica carinata
BcaC09g47912 Brassica carinata
BcaC09g49554 Brassica carinata
BcaC09g49556 Brassica carinata
BNapus_Darmor_BZH_scaffold_117p00010 Brassica napus
BolC1t03489H Brassica oleracea
BolC1t03491H Brassica oleracea
BolC1t05593H Brassica oleracea
BolC3t15443H Brassica oleracea
BolC3t16508H Brassica oleracea
BolC4t21693H Brassica oleracea
BolC4t24084H Brassica oleracea
BolC9t60091H Brassica oleracea
BraA01t02887Z Brassica rapa
BraA01t02890Z Brassica rapa
BraA01t04422Z Brassica rapa
BraA03t11809Z Brassica rapa
BraA03t12660Z Brassica rapa
BraA03t15714Z Brassica rapa
BraA05t19053Z Brassica rapa
C01p35320 Brassica napus
C01p35340 Brassica napus
C03p30920 Brassica napus
C03p42380 Brassica napus
C04p00590 Brassica napus
C04p27080 Brassica napus
C09p11420 Brassica napus
C09p65280 Brassica napus
C09p73600 Brassica napus
CAN.G1.66 Capsicum annuum
CAN.G100.66 Capsicum annuum
CAN.G1076.16 Capsicum annuum
CAN.G1280.31 Capsicum annuum
CAN.G599.4 Capsicum annuum
CAN.G599.5 Capsicum annuum
CAN.G599.6 Capsicum annuum
CANSAT25G2668 Cannabis sativa
CANSAT54G2301 Cannabis sativa
CANSAT54G2406 Cannabis sativa
CANSAT78G2492 Cannabis sativa
CARHR055120 Cardamine hirsuta
CARHR055170 Cardamine hirsuta
CARHR081250 Cardamine hirsuta
CARHR142740 Cardamine hirsuta
Carub.0002s0768 Capsella rubella
Carub.0002s0770 Capsella rubella
Carub.0003s0620 Capsella rubella
Carub.0004s3007 Capsella rubella
Ca_09216_v3 Cicer arietinum L.
Ca_10175_v3 Cicer arietinum L.
Ca_21445_v3 Cicer arietinum L.
CBR_g17903 Chara braunii
CBR_g18648 Chara braunii
CBR_g3545 Chara braunii
CBR_g3787 Chara braunii
CBR_g3791 Chara braunii
CBR_g45761 Chara braunii
CBR_g48354 Chara braunii
CBR_g51948 Chara braunii
Cc01_g21510 Coffea canephora
Cc02_g35070 Coffea canephora
Cc02_g35080 Coffea canephora
CDE02G2681 Ceratophyllum demersum
CDE09G1391 Ceratophyllum demersum
Cfa005783 Carpinus fangiana
Cfa006706 Carpinus fangiana
Cfa015325 Carpinus fangiana
Ciclev10003914m.g Citrus clementina
Ciclev10004963m.g Citrus clementina
Ciclev10023762m.g Citrus clementina
CiPaw.02G075600 Carya illinoinensis
CiPaw.07G030000 Carya illinoinensis
CiPaw.07G118500 Carya illinoinensis
CiPaw.08G088900 Carya illinoinensis
CiPaw.08G155000 Carya illinoinensis
CiPaw.08G155200 Carya illinoinensis
ClCG02G014870 Citrullus lanatus
COL.COLO4_05547 Corchorus olitorius
COL.COLO4_05548 Corchorus olitorius
COL.COLO4_23221 Corchorus olitorius
COL.COLO4_34631 Corchorus olitorius
Cpa.g.sc18.58 Carica papaya
Cpa.g.sc48.165 Carica papaya
Cpa.g.sc48.166 Carica papaya
Cpa.g.sc9.69 Carica papaya
Cpa.g.sc9.70 Carica papaya
Cre02.g084900 Chlamydomonas reinhardtii
Cre12.g556100 Chlamydomonas reinhardtii
CsaV3_2G007140 Cucumis sativus L.
CsaV3_7G030020 Cucumis sativus L.
CSS0002436 Camellia sinensis var. sinensis
CSS0003239 Camellia sinensis var. sinensis
CSS0003451 Camellia sinensis var. sinensis
CSS0004963 Camellia sinensis var. sinensis
CSS0006677 Camellia sinensis var. sinensis
CSS0011362 Camellia sinensis var. sinensis
CSS0014814 Camellia sinensis var. sinensis
CSS0021219 Camellia sinensis var. sinensis
CSS0027854 Camellia sinensis var. sinensis
CSS0029007 Camellia sinensis var. sinensis
CSS0038844 Camellia sinensis var. sinensis
CSS0041363 Camellia sinensis var. sinensis
CSS0048014 Camellia sinensis var. sinensis
CSS0048085 Camellia sinensis var. sinensis
DCAR_002890 Daucus carota
DCAR_012336 Daucus carota
DCAR_018293 Daucus carota
DCAR_029350 Daucus carota
Dinv10110 Davidia involucrata
Dinv15186 Davidia involucrata
Dinv24448 Davidia involucrata
Dinv33126 Davidia involucrata
Duzib052G0070 Durio zibethinus
Duzib106G0021 Durio zibethinus
Duzib133G1523 Durio zibethinus
Duzib138G1716 Durio zibethinus
Duzib151G0983 Durio zibethinus
Duzib177G1143 Durio zibethinus
Duzib212G0481 Durio zibethinus
ECA236G4065 Erigeron canadensis
EL10Ac1g01661 Beta vulgaris
EL10Ac3g04962 Beta vulgaris
EL10Ac3g05479 Beta vulgaris
EL10Ac4g09460 Beta vulgaris
EL10As5g23542 Beta vulgaris
Eucgr.K03549 Eucalyptus grandis
Eucgr.L00262 Eucalyptus grandis
Eucgr.L00263 Eucalyptus grandis
FAN02G4226 Fragaria x ananassa
FAN04G0292 Fragaria x ananassa
FAN05G0225 Fragaria x ananassa
FAN07G2798 Fragaria x ananassa
FAN09G1839 Fragaria x ananassa
FAN12G1694 Fragaria x ananassa
FAN13G2122 Fragaria x ananassa
FAN14G4490 Fragaria x ananassa
FvH4_4g19561 Fragaria vesca
FvH4_5g39030 Fragaria vesca
FvH4_6g07471 Fragaria vesca
FvH4_6g07480 Fragaria vesca
Glyma.03G220300 Glycine max
Glyma.10G146800 Glycine max
Glyma.17G032902 Glycine max
Glyma.19G217200 Glycine max
Glyma.20G096900 Glycine max
Glyma.20G097300 Glycine max
Gohir.A02G054000 Gossypium hirsutum
Gohir.A07G128900 Gossypium hirsutum
Gohir.A11G273700 Gossypium hirsutum
Gohir.A11G273800 Gossypium hirsutum
Gohir.D02G058700 Gossypium hirsutum
Gohir.D07G133300 Gossypium hirsutum
Gohir.D10G111266 Gossypium hirsutum
Gohir.D11G283800 Gossypium hirsutum
Gohir.D11G283900 Gossypium hirsutum
Gorai.001G144600 Gossypium raimondii
Gorai.005G066400 Gossypium raimondii
Gorai.005G157900 Gossypium raimondii
Gorai.007G306700 Gossypium raimondii
Gorai.007G306800 Gossypium raimondii
Gorai.009G392200 Gossypium raimondii
GSVIVG01028133001 Vitis vinifera
GSVIVG01031244001 Vitis vinifera
GSVIVG01035006001 Vitis vinifera
HanXRQChr04g0106191 Helianthus annuus
HanXRQChr06g0168121 Helianthus annuus
HanXRQChr06g0173421 Helianthus annuus
HanXRQChr09g0246241 Helianthus annuus
Haze_01290 Corylus avellana
Haze_04057 Corylus avellana
Haze_04058 Corylus avellana
Haze_05057 Corylus avellana
Hma1.2p1_0008F-1.1_g005580 Hydrangea macrophylla
Hma1.2p1_0008F-1.1_g005585 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163370 Hydrangea macrophylla
HPP92_013522 Vanilla planifolia
HPP92_015958 Vanilla planifolia
HPP92_015971 Vanilla planifolia
Hund02943 Selenicereus undatus
Hund07313 Selenicereus undatus
Hund09636 Selenicereus undatus
Hund11965 Selenicereus undatus
Hund23305 Selenicereus undatus
Lalb_Chr02g0147791 Lupinus albus
Lalb_Chr06g0166911 Lupinus albus
Lalb_Chr18g0046671 Lupinus albus
Lalb_Chr18g0046681 Lupinus albus
Lalb_Chr18g0046691 Lupinus albus
Lj1A16T39 Lonicera japonica
Lj1g0005808 Lotus japonicus
Lj5A331T38 Lonicera japonica
Lj5C332T2 Lonicera japonica
Lj5g0005524 Lotus japonicus
Lj5g0009841 Lotus japonicus
Lsat_1_v5_gn_1_19581 Lactuca sativa
Lsat_1_v5_gn_9_121880 Lactuca sativa
Lsat_1_v5_gn_9_121900 Lactuca sativa
Manes.03G204100 Manihot esculenta
Manes.05G004500 Manihot esculenta
Manes.08G110850 Manihot esculenta
Manes.09G177200 Manihot esculenta
Mapoly0054s0027 Marchantia polymorpha
Mapoly0127s0050 Marchantia polymorpha
MBI13_g05319_MAGBIO Magnolia biondii
MBI18_g17310_MAGBIO Magnolia biondii
MBI19_g40070_MAGBIO Magnolia biondii
MBI19_g40072_MAGBIO Magnolia biondii
MD00G1140600 Malus domestica
MD00G1208200 Malus domestica
MD03G1292700 Malus domestica
MD04G1214800 Malus domestica
MD04G1215000 Malus domestica
MD12G1205400 Malus domestica
MD12G1205500 Malus domestica
MD13G1155600 Malus domestica
MD16G1155200 Malus domestica
MD16G1155300 Malus domestica
Medtr1g084100 Medicago truncatula
MELO3C004179.2 Cucumis melo
MELO3C015918.2 Cucumis melo
Migut.B00963 Erythranthe guttata
Migut.B00966 Erythranthe guttata
Migut.D00076 Erythranthe guttata
MSTRG.16407 Avicennia marina
MSTRG.18095 Avicennia marina
MSTRG.20379 Avicennia marina
Nitab4.5_0000155g0120 Nicotiana tabacum
Nitab4.5_0000363g0210 Nicotiana tabacum
Nitab4.5_0000368g0010 Nicotiana tabacum
Nitab4.5_0002033g0020 Nicotiana tabacum
Nitab4.5_0003540g0120 Nicotiana tabacum
Nitab4.5_0007087g0040 Nicotiana tabacum
Nitab4.5_0007407g0090 Nicotiana tabacum
Nitab4.5_0007698g0020 Nicotiana tabacum
Nn1g02026 Nelumbo nucifera
Nn4g22679 Nelumbo nucifera
Nn4g25585 Nelumbo nucifera
Oeu000006.2 Olea europaea
Oeu001946.1 Olea europaea
Oeu018082.1 Olea europaea
Oeu018083.1 Olea europaea
Oeu038024.1 Olea europaea
Oeu049916.1 Olea europaea
Os03g0811500 Oryza sativa ssp. japonica
Os05g0129900 Oryza sativa ssp. japonica
Os12g0561200 Oryza sativa ssp. japonica
Peaxi162Scf00058g00268 Petunia axillaris
Peaxi162Scf00595g00424 Petunia axillaris
Peaxi162Scf00673g00437 Petunia axillaris
Peaxi162Scf00691g00418 Petunia axillaris
Peaxi162Scf00750g00034 Petunia axillaris
PGR044G2294 Punica granatum
PGR083G1716 Punica granatum
PGSC0003DMG400002766 Solanum tuberosum
PGSC0003DMG400007283 Solanum tuberosum
PGSC0003DMG400008293 Solanum tuberosum
PGSC0003DMG400009046 Solanum tuberosum
Phvul.001G213800 Phaseolus vulgaris
Phvul.007G201600 Phaseolus vulgaris
Potri.002G195066 Populus trichocarpa
Potri.002G195132 Populus trichocarpa
Potri.005G014000 Populus trichocarpa
Potri.005G014100 Populus trichocarpa
Potri.008G106200 Populus trichocarpa
Potri.010G144000 Populus trichocarpa
Potri.013G008300 Populus trichocarpa
Potri.013G008400 Populus trichocarpa
Potri.014G119600 Populus trichocarpa
Pp3c22_19980 Physcomitrium patens
Pp3c24_17620 Physcomitrium patens
Pp3c7_24250 Physcomitrium patens
PRCOL_00000652 Prasinoderma coloniale
PRCOL_00003648 Prasinoderma coloniale
PRCOL_00004223 Prasinoderma coloniale
PRCOL_00004430 Prasinoderma coloniale
PRCOL_00005371 Prasinoderma coloniale
Prupe.1G118900 Prunus persica
Prupe.3G076000 Prunus persica
Prupe.6G312500 Prunus persica
Prupe.8G265700 Prunus persica
Psat0s3278g0040 Pisum sativum
Psat3g019600 Pisum sativum
Psat4g024120 Pisum sativum
PSO170G0183 Papaver somniferum
PSO170G0296 Papaver somniferum
PSO210G4454 Papaver somniferum
PSO357G0240 Papaver somniferum
PSO357G0595 Papaver somniferum
PSO541G4969 Papaver somniferum
PSO675G7546 Papaver somniferum
QL03p008578 Quercus lobata
QL03p008601 Quercus lobata
QL03p013832 Quercus lobata
QL03p013877 Quercus lobata
QL03p013901 Quercus lobata
QL03p013963 Quercus lobata
QL03p014779 Quercus lobata
QL03p014812 Quercus lobata
QL03p014849 Quercus lobata
QL05p049523 Quercus lobata
QL06p011851 Quercus lobata
QL12p019533 Quercus lobata
RcHm_v2.0_Chr3g0457141 Rosa chinensis
RcHm_v2.0_Chr3g0457151 Rosa chinensis
RcHm_v2.0_Chr3g0457161 Rosa chinensis
RcHm_v2.0_Chr3g0457171 Rosa chinensis
RcHm_v2.0_Chr3g0457181 Rosa chinensis
RcHm_v2.0_Chr4g0424821 Rosa chinensis
RcHm_v2.0_Chr7g0241001 Rosa chinensis
Rhsim11G0095300 Rhododendron simsii
Rhsim11G0095400 Rhododendron simsii
Rhsim13G0004400 Rhododendron simsii
Sabra01G0113700 Salix brachista
Sabra01G0113800 Salix brachista
Sabra02G0161700 Salix brachista
Sabra05G0009600 Salix brachista
Sabra05G0009800 Salix brachista
Sabra05G0010200 Salix brachista
Sabra05G0010300 Salix brachista
Sabra05G0010800 Salix brachista
Sabra05G0021100 Salix brachista
Sabra05G0021200 Salix brachista
Sabra05G0021300 Salix brachista
Sabra05G0021500 Salix brachista
Sabra05G0022300 Salix brachista
Sabra08G0079900 Salix brachista
Sabra13G0007000 Salix brachista
Sabra13G0007100 Salix brachista
Sabra14G0088600 Salix brachista
SalBow3G4348 Salvia bowleyana
SalBow7G3301 Salvia bowleyana
SalBow7G3618 Salvia bowleyana
Sc09g0002630 Simmondsia chinensis
Sc17g0000430 Simmondsia chinensis
Sc19g0003170 Simmondsia chinensis
Sed0004948 Sechium edule
Sed0018097 Sechium edule
Sed0025878 Sechium edule
SEGI_27113 Sequoiadendron giganteum
SEGI_27730 Sequoiadendron giganteum
SEGI_32478 Sequoiadendron giganteum
SEGI_40234 Sequoiadendron giganteum
SGA_v2.0_scaffold376G50288 Striga asiatica
SGA_v2.0_scaffold4G01971 Striga asiatica
SGA_v2.0_scaffold53G19286 Striga asiatica
SHI20123 Sapria himalayana
SMO119G0158 Selaginella moellendorffii
Solyc01g079350.3 Solanum lycopersicum
Solyc01g100540.4 Solanum lycopersicum
Solyc06g009600.2 Solanum lycopersicum
Solyc10g045540.2 Solanum lycopersicum
Sopen01g031130 Solanum pennellii
Sopen01g044050 Solanum pennellii
Sopen06g004230 Solanum pennellii
Sopen10g015810 Solanum pennellii
Sp2g06300 Schrenkiella parvula
Sp2g06370 Schrenkiella parvula
Sp3g05650 Schrenkiella parvula
Sp4g29290 Schrenkiella parvula
TAR362G0447 Trochodendron aralioides
TAR365G0581 Trochodendron aralioides
TAR365G0840 Trochodendron aralioides
TAR633G1266 Trochodendron aralioides
TAR706G0001 Trochodendron aralioides
THA.LOC104800350 Tarenaya hassleriana
THA.LOC104816892 Tarenaya hassleriana
THA.LOC104818888 Tarenaya hassleriana
THA.LOC104820603 Tarenaya hassleriana
THA.LOC104822548 Tarenaya hassleriana
Thecc.01G314700 Theobroma cacao
Thecc.04G299200 Theobroma cacao
Thecc.05G323400 Theobroma cacao
Thecc.05G323500 Theobroma cacao
Thhalv10001400m.g Eutrema salsugineum
Thhalv10020778m.g Eutrema salsugineum
Thhalv10023436m.g Eutrema salsugineum
Thhalv10023443m.g Eutrema salsugineum
TPR.G16838 Trifolium pratense
TPR.G2618 Trifolium pratense
TPR.G4096 Trifolium pratense
TWI09G1050 Tripterygium wilfordii
TWI18G0419 Tripterygium wilfordii
TWI36G0984 Tripterygium wilfordii
TWI36G1129 Tripterygium wilfordii
TWI56G0128 Tripterygium wilfordii
TWI73G0888 Tripterygium wilfordii
unitig_0.g283 Utricularia gibba
unitig_46.g18366 Utricularia gibba
unitig_578.g16629 Utricularia gibba
unitig_85.g27184 Utricularia gibba
vmacro01564 Vaccinium macrocarpon
vmacro01565 Vaccinium macrocarpon
vmacro02397 Vaccinium macrocarpon
VMungo0720G0959 Vigna mungo
VMungo1383G2602 Vigna mungo
Zm00001eb015100 Zea mays
Zm00001eb062140 Zea mays
Zm00001eb136960 Zea mays
Zm00001eb212230 Zea mays
Zm00001eb354870 Zea mays

User provided reference genes

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