Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p34660 Brassica napus
A03p41520 Brassica napus
A05p29120 Brassica napus
A06p03170 Brassica napus
A10p06490 Brassica napus
Aa31LG10G3890 Aethionema arabicum
Aa31LG3G16250 Aethionema arabicum
Aa31LG8G6780 Aethionema arabicum
Aa31sc152G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3406 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1809 Anthoceros agrestis
Actinidia11644 Actinidia chinensis
Actinidia11646 Actinidia chinensis
Actinidia15340 Actinidia chinensis
Actinidia23141 Actinidia chinensis
Actinidia23820 Actinidia chinensis
Actinidia34517 Actinidia chinensis
Ah.08g217550 Amaranthus hybridus
Ah.15g094750 Amaranthus hybridus
AL1G20890 Arabidopsis lyrata
AL1G24210 Arabidopsis lyrata
AL1G24300 Arabidopsis lyrata
AL1G24420 Arabidopsis lyrata
AL1G26410 Arabidopsis lyrata
AL1G53420 Arabidopsis lyrata
AL1G58040 Arabidopsis lyrata
AL3G33650 Arabidopsis lyrata
AL6G21430 Arabidopsis lyrata
Aqoxy1G00060 Aquilegia oxysepala
Aqoxy3G02451 Aquilegia oxysepala
Aqoxy5G01597 Aquilegia oxysepala
Aqoxy6G00003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3FZ8N2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3I28FP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5N4VNG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.78WJBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.814T0F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FRF4XF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6ATHE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ME03Z4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4IWB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QQP7PG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK8AAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ULZ0R3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y21F8V Arachis hypogaea
AT1G47271 Arabidopsis thaliana
AT1G50400 Arabidopsis thaliana
AT3G20000 Arabidopsis thaliana
AT5G10860 Arabidopsis thaliana
ATR0068G112 Amborella trichopoda
ATR0568G077 Amborella trichopoda
ATR0796G115 Amborella trichopoda
Atru.chr10.2378 Acer truncatum
Atru.chr10.2379 Acer truncatum
Atru.chr10.2402 Acer truncatum
Atru.chr12.1216 Acer truncatum
Atru.chr13.449 Acer truncatum
Atru.chr2.2534 Acer truncatum
Atru.chr2.2541 Acer truncatum
Atru.chr2.2572 Acer truncatum
Atru.chr2.2573 Acer truncatum
Atru.chr2.3728 Acer truncatum
AUR62001375 Chenopodium quinoa
AUR62008631 Chenopodium quinoa
AUR62025591 Chenopodium quinoa
AUR62033140 Chenopodium quinoa
AUR62033854 Chenopodium quinoa
AUR62041669 Chenopodium quinoa
BcaB04g20672 Brassica carinata
BcaB06g26069 Brassica carinata
BcaB07g33845 Brassica carinata
BcaC01g03591 Brassica carinata
BcaC01g03592 Brassica carinata
BcaC03g13337 Brassica carinata
BcaC04g19279 Brassica carinata
BcaC05g28374 Brassica carinata
BcaC08g42940 Brassica carinata
BcaC09g48956 Brassica carinata
BolC1t04372H Brassica oleracea
BolC2t06430H Brassica oleracea
BolC3t17368H Brassica oleracea
BolC5t33176H Brassica oleracea
BolC6t35666H Brassica oleracea
BraA02t05056Z Brassica rapa
BraA03t13306Z Brassica rapa
BraA05t21795Z Brassica rapa
BraA06t23528Z Brassica rapa
C01p44090 Brassica napus
C03p50840 Brassica napus
C05p44520 Brassica napus
C06p01840 Brassica napus
C06p05590 Brassica napus
CAN.G1226.34 Capsicum annuum
CAN.G1443.11 Capsicum annuum
CAN.G181.51 Capsicum annuum
CAN.G3.17 Capsicum annuum
CAN.G874.54 Capsicum annuum
CAN.G895.17 Capsicum annuum
CANSAT25G2476 Cannabis sativa
CANSAT54G1115 Cannabis sativa
CANSAT78G0076 Cannabis sativa
CARHR036830 Cardamine hirsuta
CARHR040410 Cardamine hirsuta
CARHR095530 Cardamine hirsuta
CARHR202420 Cardamine hirsuta
Carub.0001s1254 Capsella rubella
Carub.0001s3606 Capsella rubella
Carub.0001s3947 Capsella rubella
Carub.0003s1990 Capsella rubella
Carub.0006s0936 Capsella rubella
Ca_05734_v3 Cicer arietinum L.
Ca_15507_v3 Cicer arietinum L.
Ca_17248_v3 Cicer arietinum L.
CBR_g45690 Chara braunii
CBR_g57221 Chara braunii
Cc01_g15650 Coffea canephora
Cc01_g15660 Coffea canephora
Cc10_g02710 Coffea canephora
CDE02G2561 Ceratophyllum demersum
CDE04G2801 Ceratophyllum demersum
CDE05G2195 Ceratophyllum demersum
CDE11G0548 Ceratophyllum demersum
Cfa008557 Carpinus fangiana
Cfa018171 Carpinus fangiana
Cfa018684 Carpinus fangiana
Cfa024019 Carpinus fangiana
Ciclev10003449m.g Citrus clementina
Ciclev10003909m.g Citrus clementina
Ciclev10032173m.g Citrus clementina
CiPaw.01G107500 Carya illinoinensis
CiPaw.02G058400 Carya illinoinensis
CiPaw.13G059200 Carya illinoinensis
CiPaw.14G047200 Carya illinoinensis
CiPaw.15G080500 Carya illinoinensis
CiPaw.16G059800 Carya illinoinensis
CiPaw.16G060000 Carya illinoinensis
ClCG02G018900 Citrullus lanatus
ClCG07G016660 Citrullus lanatus
ClCG08G014900 Citrullus lanatus
COL.COLO4_26293 Corchorus olitorius
COL.COLO4_33124 Corchorus olitorius
Cpa.g.sc247.4 Carica papaya
Cpa.g.sc70.24 Carica papaya
Cre10.g424450 Chlamydomonas reinhardtii
CsaV3_2G028860 Cucumis sativus L.
CsaV3_4G003790 Cucumis sativus L.
CsaV3_6G013290 Cucumis sativus L.
CSS0000014 Camellia sinensis var. sinensis
CSS0000778 Camellia sinensis var. sinensis
CSS0011393 Camellia sinensis var. sinensis
CSS0015861 Camellia sinensis var. sinensis
CSS0017435 Camellia sinensis var. sinensis
CSS0023381 Camellia sinensis var. sinensis
CSS0023896 Camellia sinensis var. sinensis
CSS0040771 Camellia sinensis var. sinensis
CSS0042877 Camellia sinensis var. sinensis
CSS0045685 Camellia sinensis var. sinensis
DCAR_017551 Daucus carota
DCAR_018596 Daucus carota
DCAR_018597 Daucus carota
Dinv18269 Davidia involucrata
Dinv18270 Davidia involucrata
Dinv28769 Davidia involucrata
Dinv29695 Davidia involucrata
Dinv36097 Davidia involucrata
Dinv39432 Davidia involucrata
Duzib052G0423 Durio zibethinus
Duzib093G0419 Durio zibethinus
Duzib116G0938 Durio zibethinus
Duzib132G0334 Durio zibethinus
Duzib192G0625 Durio zibethinus
Duzib213G1068 Durio zibethinus
Duzib248G1082 Durio zibethinus
ECA232G0746 Erigeron canadensis
ECA236G4867 Erigeron canadensis
ECA246G0616 Erigeron canadensis
ECA247G0838 Erigeron canadensis
ECA247G3983 Erigeron canadensis
ECA248G2863 Erigeron canadensis
ECA248G3873 Erigeron canadensis
EL10Ac7g17508 Beta vulgaris
EL10Ac7g18232 Beta vulgaris
Eucgr.F01886 Eucalyptus grandis
Eucgr.J00343 Eucalyptus grandis
Eucgr.J03199 Eucalyptus grandis
Eucgr.L01179 Eucalyptus grandis
FAN07G0891 Fragaria x ananassa
FAN11G1411 Fragaria x ananassa
FAN12G0420 Fragaria x ananassa
FAN12G3706 Fragaria x ananassa
FAN15G2852 Fragaria x ananassa
FAN16G0641 Fragaria x ananassa
FAN17G0976 Fragaria x ananassa
FAN20G1560 Fragaria x ananassa
FAN21G3752 Fragaria x ananassa
FAN22G1286 Fragaria x ananassa
FAN25G0793 Fragaria x ananassa
FAN27G1556 Fragaria x ananassa
FvH4_2g39650 Fragaria vesca
FvH4_3g41290 Fragaria vesca
FvH4_4g11890 Fragaria vesca
Glyma.02G238700 Glycine max
Glyma.04G031200 Glycine max
Glyma.05G241100 Glycine max
Glyma.06G031300 Glycine max
Glyma.08G048100 Glycine max
Glyma.14G207600 Glycine max
Gohir.A01G012100 Gossypium hirsutum
Gohir.A03G167500 Gossypium hirsutum
Gohir.A04G109448 Gossypium hirsutum
Gohir.A06G009500 Gossypium hirsutum
Gohir.A13G125200 Gossypium hirsutum
Gohir.D01G013300 Gossypium hirsutum
Gohir.D02G190600 Gossypium hirsutum
Gohir.D04G149200 Gossypium hirsutum
Gohir.D06G005000 Gossypium hirsutum
Gohir.D13G128900 Gossypium hirsutum
Gorai.002G015100 Gossypium raimondii
Gorai.005G213300 Gossypium raimondii
Gorai.010G009600 Gossypium raimondii
Gorai.012G135700 Gossypium raimondii
Gorai.013G145100 Gossypium raimondii
GSVIVG01009726001 Vitis vinifera
GSVIVG01024516001 Vitis vinifera
GSVIVG01038525001 Vitis vinifera
HanXRQChr01g0013431 Helianthus annuus
HanXRQChr01g0013691 Helianthus annuus
HanXRQChr05g0136431 Helianthus annuus
HanXRQChr08g0231021 Helianthus annuus
HanXRQChr08g0231041 Helianthus annuus
HanXRQChr09g0269041 Helianthus annuus
HanXRQChr11g0347311 Helianthus annuus
HanXRQChr12g0366321 Helianthus annuus
Haze_07069 Corylus avellana
Haze_07070 Corylus avellana
Haze_11068 Corylus avellana
Haze_17409 Corylus avellana
Haze_17944 Corylus avellana
Hma1.2p1_0161F.1_g071910 Hydrangea macrophylla
Hma1.2p1_0161F.1_g071920 Hydrangea macrophylla
Hma1.2p1_0203F.1_g086260 Hydrangea macrophylla
Hma1.2p1_0334F.1_g128420 Hydrangea macrophylla
Hma1.2p1_1631F.1_g294600 Hydrangea macrophylla
Hma1.2p1_1631F.1_g294620 Hydrangea macrophylla
HPP92_000810 Vanilla planifolia
HPP92_011045 Vanilla planifolia
HPP92_021162 Vanilla planifolia
Hund05689 Selenicereus undatus
Hund18151 Selenicereus undatus
Hund18623 Selenicereus undatus
Hund26586 Selenicereus undatus
Lalb_Chr09g0330751 Lupinus albus
Lalb_Chr10g0103911 Lupinus albus
Lalb_Chr15g0085501 Lupinus albus
Lalb_Chr16g0387411 Lupinus albus
Lalb_Chr18g0053981 Lupinus albus
Lalb_Chr20g0117221 Lupinus albus
Lalb_Chr23g0266561 Lupinus albus
Lj1C108G11 Lonicera japonica
Lj1g0017478 Lotus japonicus
Lj2A1108G29 Lonicera japonica
Lj2A1108T32 Lonicera japonica
Lj4A787G17 Lonicera japonica
Lj4g0016304 Lotus japonicus
LjContig00141g0017332 Lotus japonicus
Lsat_1_v5_gn_3_60440 Lactuca sativa
Lsat_1_v5_gn_4_117501 Lactuca sativa
Lsat_1_v5_gn_5_175961 Lactuca sativa
Lsat_1_v5_gn_7_45941 Lactuca sativa
Lsat_1_v5_gn_9_15561 Lactuca sativa
Lsat_1_v5_gn_9_15641 Lactuca sativa
Manes.02G210000 Manihot esculenta
Manes.04G162300 Manihot esculenta
Manes.11G000900 Manihot esculenta
Manes.18G023300 Manihot esculenta
Manes.18G121800 Manihot esculenta
Mapoly0037s0137 Marchantia polymorpha
Mapoly0160s0023 Marchantia polymorpha
MBI10_g18262_MAGBIO Magnolia biondii
MBI13_g00576_MAGBIO Magnolia biondii
MBI18_g38874_MAGBIO Magnolia biondii
MBI19_g37616_MAGBIO Magnolia biondii
MCO01G796 Micromonas commoda
MCO02G061 Micromonas commoda
MCO02G350 Micromonas commoda
MCO15G133 Micromonas commoda
MD03G1045900 Malus domestica
MD04G1030900 Malus domestica
MD08G1030200 Malus domestica
MD11G1048200 Malus domestica
MD13G1002300 Malus domestica
MD13G1277300 Malus domestica
Medtr3g111940 Medicago truncatula
Medtr5g076080 Medicago truncatula
Medtr6g037360 Medicago truncatula
Medtr8g106010 Medicago truncatula
Medtr8g106050 Medicago truncatula
Medtr8g106070 Medicago truncatula
MELO3C010955.2 Cucumis melo
MELO3C017676.2 Cucumis melo
MELO3C019601.2 Cucumis melo
Migut.D00781 Erythranthe guttata
Migut.D00782 Erythranthe guttata
Migut.N00696 Erythranthe guttata
Migut.N00697 Erythranthe guttata
MSTRG.12726 Avicennia marina
MSTRG.12727 Avicennia marina
MSTRG.17940 Avicennia marina
MSTRG.17941 Avicennia marina
MSTRG.21286 Avicennia marina
Nitab4.5_0000539g0040 Nicotiana tabacum
Nitab4.5_0000539g0050 Nicotiana tabacum
Nitab4.5_0001759g0050 Nicotiana tabacum
Nitab4.5_0002224g0160 Nicotiana tabacum
Nitab4.5_0002641g0080 Nicotiana tabacum
Nitab4.5_0003952g0030 Nicotiana tabacum
Nitab4.5_0004383g0020 Nicotiana tabacum
Nitab4.5_0004383g0060 Nicotiana tabacum
Nn1g02868 Nelumbo nucifera
Nn1g09382 Nelumbo nucifera
Nn3g17513 Nelumbo nucifera
Nn4g23504 Nelumbo nucifera
Nn5g29642 Nelumbo nucifera
Nn7g37404 Nelumbo nucifera
Oeu020447.1 Olea europaea
Oeu023909.2 Olea europaea
Oeu034604.1 Olea europaea
Oeu037695.1 Olea europaea
Os01g0276200 Oryza sativa ssp. japonica
Os01g0634900 Oryza sativa ssp. japonica
Os03g0323800 Oryza sativa ssp. japonica
Os03g0737000 Oryza sativa ssp. japonica
Peaxi162Scf00020g01813 Petunia axillaris
Peaxi162Scf00293g00041 Petunia axillaris
Peaxi162Scf00293g00510 Petunia axillaris
Peaxi162Scf00372g00719 Petunia axillaris
PGR031G0902 Punica granatum
PGR044G2652 Punica granatum
PGR102G0880 Punica granatum
PGSC0003DMG400003738 Solanum tuberosum
PGSC0003DMG400020298 Solanum tuberosum
PGSC0003DMG402020176 Solanum tuberosum
Phvul.002G324200 Phaseolus vulgaris
Phvul.008G243300 Phaseolus vulgaris
Phvul.009G058600 Phaseolus vulgaris
Potri.002G034800 Populus trichocarpa
Potri.005G228300 Populus trichocarpa
Potri.007G000200 Populus trichocarpa
Potri.013G161500 Populus trichocarpa
Potri.014G004100 Populus trichocarpa
Potri.017G000100 Populus trichocarpa
Pp3c16_22830 Physcomitrium patens
Pp3c18_14610 Physcomitrium patens
Pp3c22_19420 Physcomitrium patens
Pp3c22_6740 Physcomitrium patens
Pp3c25_12010 Physcomitrium patens
Pp3c5_24660 Physcomitrium patens
PRCOL_00000402 Prasinoderma coloniale
PRCOL_00005937 Prasinoderma coloniale
Prupe.1G180200 Prunus persica
Prupe.1G350100 Prunus persica
Prupe.1G377900 Prunus persica
Prupe.6G037200 Prunus persica
Psat2g048800 Pisum sativum
Psat5g012080 Pisum sativum
Psat7g004320 Pisum sativum
PSO170G0342 Papaver somniferum
PSO339G6378 Papaver somniferum
PSO357G0408 Papaver somniferum
PSO384G4952 Papaver somniferum
PSO407G0099 Papaver somniferum
QL01p000742 Quercus lobata
QL01p001417 Quercus lobata
QL01p023409 Quercus lobata
QL02p008982 Quercus lobata
QL10p043911 Quercus lobata
RcHm_v2.0_Chr4g0409321 Rosa chinensis
RcHm_v2.0_Chr4g0447041 Rosa chinensis
RcHm_v2.0_Chr5g0074091 Rosa chinensis
RcHm_v2.0_Chr6g0301241 Rosa chinensis
Rhsim01G0245800 Rhododendron simsii
Rhsim06G0032000 Rhododendron simsii
Rhsim13G0056400 Rhododendron simsii
Sabra05G0176200 Salix brachista
Sabra07G0000200 Salix brachista
Sabra13G0129100 Salix brachista
Sabra14G0001700 Salix brachista
Sabra14G0004100 Salix brachista
SalBow2G0190 Salvia bowleyana
SalBow6G3871 Salvia bowleyana
SalBow7G3773 Salvia bowleyana
Sc10g0009450 Simmondsia chinensis
Sc15g0000900 Simmondsia chinensis
Sc26g0003570 Simmondsia chinensis
Sed0002329 Sechium edule
Sed0005194 Sechium edule
Sed0005884 Sechium edule
Sed0008479 Sechium edule
Sed0017810 Sechium edule
SEGI_13312 Sequoiadendron giganteum
SEGI_26994 Sequoiadendron giganteum
SEGI_38927 Sequoiadendron giganteum
SGA_v2.0_scaffold120G33015 Striga asiatica
SGA_v2.0_scaffold1311G53909 Striga asiatica
SGA_v2.0_scaffold201G41410 Striga asiatica
SGA_v2.0_scaffold4G02314 Striga asiatica
SGA_v2.0_scaffold771G53579 Striga asiatica
SGA_v2.0_scaffold77G25332 Striga asiatica
SGA_v2.0_scaffold77G25334 Striga asiatica
SHI21181 Sapria himalayana
SMO143G0004 Selaginella moellendorffii
SMO367G0551 Selaginella moellendorffii
Solyc04g080510.3 Solanum lycopersicum
Solyc06g007710.4 Solanum lycopersicum
Solyc06g082793.1 Solanum lycopersicum
Solyc09g018750.3 Solanum lycopersicum
Sopen04g034100 Solanum pennellii
Sopen06g002600 Solanum pennellii
Sopen06g034150 Solanum pennellii
Sopen09g012290 Solanum pennellii
Sp1g34410 Schrenkiella parvula
Sp1g37220 Schrenkiella parvula
Sp1g37230 Schrenkiella parvula
Sp3g18030 Schrenkiella parvula
Sp6g32610 Schrenkiella parvula
TAR381G1655 Trochodendron aralioides
TAR622G0423 Trochodendron aralioides
TAR623G0286 Trochodendron aralioides
TAR629G2379 Trochodendron aralioides
THA.LOC104799019 Tarenaya hassleriana
THA.LOC104809025 Tarenaya hassleriana
THA.LOC104812559 Tarenaya hassleriana
THA.LOC104814988 Tarenaya hassleriana
THA.LOC104815250 Tarenaya hassleriana
THA.LOC104826511 Tarenaya hassleriana
Thecc.01G000200 Theobroma cacao
Thecc.02G153700 Theobroma cacao
Thecc.08G029000 Theobroma cacao
Thecc.09G366900 Theobroma cacao
Thhalv10011792m.g Eutrema salsugineum
Thhalv10012035m.g Eutrema salsugineum
Thhalv10014695m.g Eutrema salsugineum
Thhalv10021197m.g Eutrema salsugineum
TPR.G12403 Trifolium pratense
TPR.G15401 Trifolium pratense
TPR.G19258 Trifolium pratense
TWI31G1369 Tripterygium wilfordii
TWI36G0669 Tripterygium wilfordii
TWI53G0842 Tripterygium wilfordii
TWI74G0753 Tripterygium wilfordii
TWI77G0219 Tripterygium wilfordii
unitig_0.g2154 Utricularia gibba
unitig_22.g5199 Utricularia gibba
unitig_26.g10230 Utricularia gibba
unitig_6.g29276 Utricularia gibba
unitig_747.g21435 Utricularia gibba
vmacro02853 Vaccinium macrocarpon
vmacro02854 Vaccinium macrocarpon
vmacro14663 Vaccinium macrocarpon
vmacro21651 Vaccinium macrocarpon
VMungo0251G0670 Vigna mungo
VMungo0647G2108 Vigna mungo
VMungo1309G1079 Vigna mungo
Zm00001eb015420 Zea mays
Zm00001eb056450 Zea mays
Zm00001eb128840 Zea mays
Zm00001eb169830 Zea mays
Zm00001eb332770 Zea mays
Zm00001eb395490 Zea mays

User provided reference genes

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