Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24690 Brassica napus
A05p04240 Brassica napus
A06p11690 Brassica napus
A07p45250 Brassica napus
A09p52280 Brassica napus
A09p61270 Brassica napus
Aa31LG10G14180 Aethionema arabicum
Aa31LG1G25810 Aethionema arabicum
Aa31LG4G700 Aethionema arabicum
Aa31LG7G310 Aethionema arabicum
Actinidia01794 Actinidia chinensis
Actinidia01795 Actinidia chinensis
Actinidia14366 Actinidia chinensis
Actinidia17292 Actinidia chinensis
Actinidia24764 Actinidia chinensis
Actinidia38603 Actinidia chinensis
Ah.13g075540 Amaranthus hybridus
AL1G27770 Arabidopsis lyrata
AL2G41060 Arabidopsis lyrata
AL4G43010 Arabidopsis lyrata
AL5G42120 Arabidopsis lyrata
Aqoxy1G00432 Aquilegia oxysepala
Aqoxy2G00463 Aquilegia oxysepala
Aqoxy7G01833 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4F68EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5H6YYL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ELW4ST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1080P Arachis hypogaea
AT1G15670 Arabidopsis thaliana
AT1G80440 Arabidopsis thaliana
AT2G44130 Arabidopsis thaliana
AT3G59940 Arabidopsis thaliana
ATR0037G014 Amborella trichopoda
ATR0921G001 Amborella trichopoda
ATR0921G006 Amborella trichopoda
Atru.chr3.2027 Acer truncatum
Atru.chr3.2333 Acer truncatum
Atru.chr3.2334 Acer truncatum
Atru.chr8.1218 Acer truncatum
AUR62002506 Chenopodium quinoa
AUR62011618 Chenopodium quinoa
AUR62016433 Chenopodium quinoa
AUR62023684 Chenopodium quinoa
BcaB01g03329 Brassica carinata
BcaB02g08686 Brassica carinata
BcaB02g08918 Brassica carinata
BcaB03g14530 Brassica carinata
BcaC01g05185 Brassica carinata
BcaC02g12336 Brassica carinata
BcaC05g25511 Brassica carinata
BcaC05g25642 Brassica carinata
BcaC07g40399 Brassica carinata
BcaC07g40540 Brassica carinata
BcaC07g41488 Brassica carinata
BcaC08g47589 Brassica carinata
BolC3t15291H Brassica oleracea
BolC4t22135H Brassica oleracea
BolC5t30119H Brassica oleracea
BolC6t40422H Brassica oleracea
BolC8t51098H Brassica oleracea
BolC8t52029H Brassica oleracea
BraA03t11675Z Brassica rapa
BraA05t19409Z Brassica rapa
BraA06t24346Z Brassica rapa
BraA07t32029Z Brassica rapa
BraA09t40657Z Brassica rapa
BraA09t41499Z Brassica rapa
C03p29430 Brassica napus
C04p05020 Brassica napus
C05p13820 Brassica napus
C06p54090 Brassica napus
C08p34930 Brassica napus
C08p44840 Brassica napus
CAN.G128.56 Capsicum annuum
CAN.G395.18 Capsicum annuum
CAN.G438.53 Capsicum annuum
CAN.G438.54 Capsicum annuum
CANSAT11G2555 Cannabis sativa
CANSAT56G0115 Cannabis sativa
CANSAT64G2817 Cannabis sativa
CARHR016170 Cardamine hirsuta
CARHR074810 Cardamine hirsuta
CARHR139310 Cardamine hirsuta
CARHR170270 Cardamine hirsuta
Carub.0001s1545 Capsella rubella
Carub.0002s2714 Capsella rubella
Carub.0004s2668 Capsella rubella
Carub.0005s2668 Capsella rubella
Ca_01107_v3 Cicer arietinum L.
Ca_17952_v3 Cicer arietinum L.
Ca_20404_v3 Cicer arietinum L.
Cc01_g02570 Coffea canephora
Cc01_g12350 Coffea canephora
Cc04_g03570 Coffea canephora
Cc06_g23270 Coffea canephora
CDE02G0577 Ceratophyllum demersum
CDE02G2820 Ceratophyllum demersum
CDE06G1862 Ceratophyllum demersum
CDE07G1861 Ceratophyllum demersum
CDE09G1074 Ceratophyllum demersum
Cfa002051 Carpinus fangiana
Cfa003270 Carpinus fangiana
Cfa008540 Carpinus fangiana
Cfa009597 Carpinus fangiana
Cfa010199 Carpinus fangiana
Cfa016980 Carpinus fangiana
Cfa017764 Carpinus fangiana
Cfa019863 Carpinus fangiana
Cfa020118 Carpinus fangiana
Ciclev10012048m.g Citrus clementina
Ciclev10015832m.g Citrus clementina
Ciclev10020147m.g Citrus clementina
Ciclev10025956m.g Citrus clementina
CiPaw.01G203700 Carya illinoinensis
CiPaw.01G240500 Carya illinoinensis
CiPaw.01G240600 Carya illinoinensis
CiPaw.02G126000 Carya illinoinensis
CiPaw.10G023900 Carya illinoinensis
ClCG02G023980 Citrullus lanatus
ClCG10G017780 Citrullus lanatus
COL.COLO4_27889 Corchorus olitorius
COL.COLO4_29432 Corchorus olitorius
COL.COLO4_30334 Corchorus olitorius
COL.COLO4_30335 Corchorus olitorius
Cpa.g.sc10.159 Carica papaya
Cpa.g.sc10.160 Carica papaya
Cpa.g.sc119.71 Carica papaya
CsaV3_3G038520 Cucumis sativus L.
CsaV3_4G023370 Cucumis sativus L.
CsaV3_7G005560 Cucumis sativus L.
CSS0009976 Camellia sinensis var. sinensis
CSS0038963 Camellia sinensis var. sinensis
CSS0041305 Camellia sinensis var. sinensis
CSS0046299 Camellia sinensis var. sinensis
CSS0046472 Camellia sinensis var. sinensis
DCAR_013676 Daucus carota
DCAR_017044 Daucus carota
DCAR_026307 Daucus carota
Dinv13440 Davidia involucrata
Dinv25013 Davidia involucrata
Dinv38058 Davidia involucrata
Duzib093G0564 Durio zibethinus
Duzib128G1242 Durio zibethinus
Duzib192G0513 Durio zibethinus
Duzib235G0360 Durio zibethinus
Duzib235G0651 Durio zibethinus
Duzib251G0651 Durio zibethinus
Duzib268G0731 Durio zibethinus
ECA232G1581 Erigeron canadensis
ECA238G2542 Erigeron canadensis
ECA248G0110 Erigeron canadensis
EL10Ac3g06191 Beta vulgaris
EL10Ac3g06850 Beta vulgaris
EL10Ac9g21985 Beta vulgaris
Eucgr.B03615 Eucalyptus grandis
Eucgr.J01808 Eucalyptus grandis
Eucgr.J01812 Eucalyptus grandis
Eucgr.J03012 Eucalyptus grandis
Eucgr.J03013 Eucalyptus grandis
Eucgr.J03014 Eucalyptus grandis
Eucgr.J03015 Eucalyptus grandis
FAN02G0598 Fragaria x ananassa
FAN02G0609 Fragaria x ananassa
FAN02G1500 Fragaria x ananassa
FAN05G0681 Fragaria x ananassa
FAN05G2339 Fragaria x ananassa
FAN05G2458 Fragaria x ananassa
FAN09G1740 Fragaria x ananassa
FAN09G2951 Fragaria x ananassa
FAN11G1285 Fragaria x ananassa
FAN14G0386 Fragaria x ananassa
FAN14G1072 Fragaria x ananassa
FAN14G1283 Fragaria x ananassa
FAN16G0078 Fragaria x ananassa
FAN16G1103 Fragaria x ananassa
FAN21G0910 Fragaria x ananassa
FAN25G1208 Fragaria x ananassa
FvH4_3g45300 Fragaria vesca
FvH4_6g21491 Fragaria vesca
FvH4_6g30930 Fragaria vesca
FvH4_6g30950 Fragaria vesca
Glyma.05G155600 Glycine max
Glyma.07G034400 Glycine max
Glyma.08G207700 Glycine max
Glyma.13G360600 Glycine max
Glyma.15G013300 Glycine max
Gohir.A03G104000 Gossypium hirsutum
Gohir.A04G054200 Gossypium hirsutum
Gohir.A09G130100 Gossypium hirsutum
Gohir.A09G173000 Gossypium hirsutum
Gohir.A10G079100 Gossypium hirsutum
Gohir.A10G079200 Gossypium hirsutum
Gohir.A13G082400 Gossypium hirsutum
Gohir.D02G129500 Gossypium hirsutum
Gohir.D04G094200 Gossypium hirsutum
Gohir.D09G126150 Gossypium hirsutum
Gohir.D09G168700 Gossypium hirsutum
Gohir.D10G072300 Gossypium hirsutum
Gohir.D10G072400 Gossypium hirsutum
Gohir.D13G082050 Gossypium hirsutum
Gorai.005G145300 Gossypium raimondii
Gorai.006G145000 Gossypium raimondii
Gorai.006G190300 Gossypium raimondii
Gorai.009G393100 Gossypium raimondii
Gorai.011G077800 Gossypium raimondii
Gorai.011G078000 Gossypium raimondii
Gorai.013G093900 Gossypium raimondii
GSVIVG01017147001 Vitis vinifera
GSVIVG01017151001 Vitis vinifera
GSVIVG01017545001 Vitis vinifera
GSVIVG01017546001 Vitis vinifera
GSVIVG01038271001 Vitis vinifera
HanXRQChr01g0024791 Helianthus annuus
HanXRQChr03g0090521 Helianthus annuus
HanXRQChr09g0275381 Helianthus annuus
HanXRQChr16g0501041 Helianthus annuus
Haze_11095 Corylus avellana
Haze_16455 Corylus avellana
Haze_20070 Corylus avellana
Haze_22972 Corylus avellana
Hma1.2p1_0116F.1_g056230 Hydrangea macrophylla
Hma1.2p1_0516F.1_g170630 Hydrangea macrophylla
Hma1.2p1_0682F.1_g202680 Hydrangea macrophylla
HPP92_003640 Vanilla planifolia
HPP92_003641 Vanilla planifolia
HPP92_003642 Vanilla planifolia
HPP92_007589 Vanilla planifolia
HPP92_016125 Vanilla planifolia
Lalb_Chr04g0262601 Lupinus albus
Lalb_Chr11g0069401 Lupinus albus
Lalb_Chr25g0279621 Lupinus albus
Lj1P1134T22 Lonicera japonica
Lj2P361T21 Lonicera japonica
Lj3g0007919 Lotus japonicus
Lj3g0013045 Lotus japonicus
Lj4g0008324 Lotus japonicus
Lj5C62T9 Lonicera japonica
Lsat_1_v5_gn_1_58781 Lactuca sativa
Lsat_1_v5_gn_2_57920 Lactuca sativa
Lsat_1_v5_gn_4_103441 Lactuca sativa
Manes.01G009100 Manihot esculenta
Manes.04G121600 Manihot esculenta
Manes.09G040100 Manihot esculenta
Manes.11G052110 Manihot esculenta
Manes.11G052140 Manihot esculenta
Mapoly0013s0015 Marchantia polymorpha
Mapoly0016s0093 Marchantia polymorpha
Mapoly0096s0073 Marchantia polymorpha
Mapoly0141s0015 Marchantia polymorpha
MBI04_g26640_MAGBIO Magnolia biondii
MBI07_g22517_MAGBIO Magnolia biondii
MBI10_g06571_MAGBIO Magnolia biondii
MD03G1006500 Malus domestica
MD11G1009500 Malus domestica
MD12G1051200 Malus domestica
MD14G1050600 Malus domestica
MD17G1197600 Malus domestica
Medtr2g102355 Medicago truncatula
Medtr2g102370 Medicago truncatula
Medtr4g011900 Medicago truncatula
Medtr8g085650 Medicago truncatula
MELO3C009596.2 Cucumis melo
MELO3C014678.2 Cucumis melo
Migut.I00848 Erythranthe guttata
Migut.J01876 Erythranthe guttata
MSTRG.11088 Avicennia marina
MSTRG.22701 Avicennia marina
Nitab4.5_0000351g0220 Nicotiana tabacum
Nitab4.5_0001079g0100 Nicotiana tabacum
Nitab4.5_0003885g0100 Nicotiana tabacum
Nitab4.5_0006801g0010 Nicotiana tabacum
Nitab4.5_0008606g0040 Nicotiana tabacum
Nitab4.5_0009131g0030 Nicotiana tabacum
Nitab4.5_0013554g0010 Nicotiana tabacum
Nitab4.5_0019872g0010 Nicotiana tabacum
Nn2g11833 Nelumbo nucifera
Nn2g13232 Nelumbo nucifera
Nn2g15807 Nelumbo nucifera
Nn3g18423 Nelumbo nucifera
Nn4g26649 Nelumbo nucifera
Nn7g35908 Nelumbo nucifera
Nn7g37420 Nelumbo nucifera
Nn8g39272 Nelumbo nucifera
Oeu033498.3 Olea europaea
Oeu057596.1 Olea europaea
Os01g0797800 Oryza sativa ssp. japonica
Os01g0873300 Oryza sativa ssp. japonica
Os02g0208700 Oryza sativa ssp. japonica
Os02g0563000 Oryza sativa ssp. japonica
Os06g0594400 Oryza sativa ssp. japonica
Os11g0246200 Oryza sativa ssp. japonica
Peaxi162Scf00015g00033 Petunia axillaris
Peaxi162Scf00015g10032 Petunia axillaris
Peaxi162Scf00207g00092 Petunia axillaris
Peaxi162Scf00249g00815 Petunia axillaris
Peaxi162Scf00463g00024 Petunia axillaris
PGR031G0077 Punica granatum
PGR102G0051 Punica granatum
PGR102G0293 Punica granatum
PGR102G0522 Punica granatum
PGR102G1506 Punica granatum
PGR102G1653 Punica granatum
PGR102G2147 Punica granatum
PGR102G2246 Punica granatum
PGR102G3265 Punica granatum
PGR119G0720 Punica granatum
PGSC0003DMG400002561 Solanum tuberosum
PGSC0003DMG400002562 Solanum tuberosum
PGSC0003DMG400016540 Solanum tuberosum
PGSC0003DMG400016541 Solanum tuberosum
PGSC0003DMG400016542 Solanum tuberosum
PGSC0003DMG400023703 Solanum tuberosum
Phvul.002G235700 Phaseolus vulgaris
Phvul.005G172400 Phaseolus vulgaris
Phvul.010G151500 Phaseolus vulgaris
Potri.001G007000 Populus trichocarpa
Potri.001G178300 Populus trichocarpa
Potri.001G178500 Populus trichocarpa
Potri.003G218400 Populus trichocarpa
Potri.006G196900 Populus trichocarpa
Potri.007G147000 Populus trichocarpa
Potri.017G000700 Populus trichocarpa
Pp3c10_1490 Physcomitrium patens
Pp3c13_12640 Physcomitrium patens
Pp3c14_1310 Physcomitrium patens
Pp3c1_20910 Physcomitrium patens
Pp3c26_7990 Physcomitrium patens
Pp3c3_15470 Physcomitrium patens
Pp3c8_18180 Physcomitrium patens
Pp3c9_7690 Physcomitrium patens
Prupe.3G073600 Prunus persica
Prupe.6G006200 Prunus persica
Prupe.7G085300 Prunus persica
Psat1g004480 Pisum sativum
Psat7g073560 Pisum sativum
Psat7g253160 Pisum sativum
PSO017G5148 Papaver somniferum
PSO063G0190 Papaver somniferum
PSO063G0541 Papaver somniferum
PSO063G1872 Papaver somniferum
PSO063G3894 Papaver somniferum
PSO063G6742 Papaver somniferum
PSO478G1262 Papaver somniferum
PSO782G0375 Papaver somniferum
PSO782G0637 Papaver somniferum
PSO782G2147 Papaver somniferum
PSO782G4287 Papaver somniferum
PSO782G4344 Papaver somniferum
QL01p008182 Quercus lobata
QL07p025479 Quercus lobata
QL07p042567 Quercus lobata
QL10p065170 Quercus lobata
RcHm_v2.0_Chr2g0137541 Rosa chinensis
RcHm_v2.0_Chr2g0137561 Rosa chinensis
RcHm_v2.0_Chr3g0478681 Rosa chinensis
RcHm_v2.0_Chr5g0082971 Rosa chinensis
Rhsim03G0108000 Rhododendron simsii
Rhsim04G0093800 Rhododendron simsii
Rhsim08G0218800 Rhododendron simsii
Rhsim08G0218900 Rhododendron simsii
Rhsim12G0196300 Rhododendron simsii
Rhsim12G0196700 Rhododendron simsii
Rhsim12G0196800 Rhododendron simsii
Rhsim12G0196900 Rhododendron simsii
Sabra01G0148100 Salix brachista
Sabra01G0148300 Salix brachista
Sabra03G0162800 Salix brachista
Sabra06G0151400 Salix brachista
Sabra07G0114400 Salix brachista
Sabra16G0064300 Salix brachista
SalBow2G2593 Salvia bowleyana
Sc10g0007470 Simmondsia chinensis
Sc16g0012120 Simmondsia chinensis
Sc19g0006240 Simmondsia chinensis
Sed0000793 Sechium edule
Sed0011515 Sechium edule
Sed0019047 Sechium edule
SEGI_00092 Sequoiadendron giganteum
SEGI_01332 Sequoiadendron giganteum
SEGI_01389 Sequoiadendron giganteum
SEGI_01766 Sequoiadendron giganteum
SEGI_02180 Sequoiadendron giganteum
SEGI_03004 Sequoiadendron giganteum
SEGI_03517 Sequoiadendron giganteum
SEGI_03658 Sequoiadendron giganteum
SEGI_04207 Sequoiadendron giganteum
SEGI_04231 Sequoiadendron giganteum
SEGI_04238 Sequoiadendron giganteum
SEGI_04662 Sequoiadendron giganteum
SEGI_05308 Sequoiadendron giganteum
SEGI_05724 Sequoiadendron giganteum
SEGI_07151 Sequoiadendron giganteum
SEGI_07625 Sequoiadendron giganteum
SEGI_08894 Sequoiadendron giganteum
SEGI_09860 Sequoiadendron giganteum
SEGI_13170 Sequoiadendron giganteum
SEGI_15632 Sequoiadendron giganteum
SEGI_15847 Sequoiadendron giganteum
SEGI_17305 Sequoiadendron giganteum
SEGI_18455 Sequoiadendron giganteum
SEGI_18627 Sequoiadendron giganteum
SEGI_20092 Sequoiadendron giganteum
SEGI_20569 Sequoiadendron giganteum
SEGI_21713 Sequoiadendron giganteum
SEGI_22493 Sequoiadendron giganteum
SEGI_24118 Sequoiadendron giganteum
SEGI_24173 Sequoiadendron giganteum
SEGI_25494 Sequoiadendron giganteum
SEGI_26243 Sequoiadendron giganteum
SEGI_28235 Sequoiadendron giganteum
SEGI_28705 Sequoiadendron giganteum
SEGI_28968 Sequoiadendron giganteum
SEGI_32143 Sequoiadendron giganteum
SEGI_33638 Sequoiadendron giganteum
SEGI_33868 Sequoiadendron giganteum
SEGI_36531 Sequoiadendron giganteum
SEGI_38291 Sequoiadendron giganteum
SEGI_39359 Sequoiadendron giganteum
SEGI_39755 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23033 Striga asiatica
SHI30037 Sapria himalayana
SMO197G0038 Selaginella moellendorffii
SMO351G0605 Selaginella moellendorffii
SMO364G0049 Selaginella moellendorffii
Solyc03g120320.1 Solanum lycopersicum
Solyc03g120330.1 Solanum lycopersicum
Solyc06g066770.1 Solanum lycopersicum
Solyc10g080610.1 Solanum lycopersicum
Sopen03g039210 Solanum pennellii
Sopen03g039220 Solanum pennellii
Sopen06g025050 Solanum pennellii
Sopen10g031150 Solanum pennellii
Sp1g13980 Schrenkiella parvula
Sp4g26210 Schrenkiella parvula
Sp5g03240 Schrenkiella parvula
Sp5g35380 Schrenkiella parvula
TAR365G0457 Trochodendron aralioides
TAR369G0799 Trochodendron aralioides
TAR383G1043 Trochodendron aralioides
THA.LOC104808205 Tarenaya hassleriana
THA.LOC104810221 Tarenaya hassleriana
THA.LOC104812470 Tarenaya hassleriana
Thecc.02G331300 Theobroma cacao
Thecc.05G179900 Theobroma cacao
Thecc.06G083400 Theobroma cacao
Thecc.06G083500 Theobroma cacao
Thhalv10001782m.g Eutrema salsugineum
Thhalv10006395m.g Eutrema salsugineum
Thhalv10008027m.g Eutrema salsugineum
Thhalv10018763m.g Eutrema salsugineum
TPR.G24174 Trifolium pratense
TPR.G24397 Trifolium pratense
TPR.G37271 Trifolium pratense
TWI12G1350 Tripterygium wilfordii
TWI18G1451 Tripterygium wilfordii
TWI60G1228 Tripterygium wilfordii
TWI75G1252 Tripterygium wilfordii
unitig_0.g520 Utricularia gibba
unitig_0.g521 Utricularia gibba
unitig_60.g25519 Utricularia gibba
vmacro16943 Vaccinium macrocarpon
vmacro16944 Vaccinium macrocarpon
vmacro18931 Vaccinium macrocarpon
vmacro18932 Vaccinium macrocarpon
vmacro22124 Vaccinium macrocarpon
VMungo0251G2428 Vigna mungo
VMungo0331G0514 Vigna mungo
VMungo1080G0493 Vigna mungo
Zm00001eb168220 Zea mays
Zm00001eb182480 Zea mays
Zm00001eb277050 Zea mays

User provided reference genes

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