Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01370 Brassica napus
A02p42610 Brassica napus
A03p65350 Brassica napus
A06p10120 Brassica napus
A06p19320 Brassica napus
A06p29890 Brassica napus
A06p32920 Brassica napus
A08p36330 Brassica napus
Aa31LG1G16040 Aethionema arabicum
Aa31LG1G18810 Aethionema arabicum
Aa31LG1G18970 Aethionema arabicum
Aa31LG4G16960 Aethionema arabicum
Aa31LG6G14510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.402 Anthoceros agrestis
Actinidia11918 Actinidia chinensis
Actinidia11919 Actinidia chinensis
Actinidia11988 Actinidia chinensis
Actinidia11989 Actinidia chinensis
Actinidia19370 Actinidia chinensis
Actinidia19371 Actinidia chinensis
Actinidia36437 Actinidia chinensis
Actinidia36769 Actinidia chinensis
Ah.03g140440 Amaranthus hybridus
Ah.07g203030 Amaranthus hybridus
AL1G15600 Arabidopsis lyrata
AL5G27770 Arabidopsis lyrata
AL7G13150 Arabidopsis lyrata
AL8G40250 Arabidopsis lyrata
AL8G43820 Arabidopsis lyrata
Aqoxy3G00658 Aquilegia oxysepala
Aqoxy3G01364 Aquilegia oxysepala
Aqoxy5G01598 Aquilegia oxysepala
Aqoxy5G03636 Aquilegia oxysepala
Aqoxy6G02658 Aquilegia oxysepala
Aqoxy6G02661 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B6M0S6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5K50D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D773D7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JA05KE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4JHXX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1SHIC Arachis hypogaea
AT1G05690 Arabidopsis thaliana
AT3G48360 Arabidopsis thaliana
AT4G37610 Arabidopsis thaliana
AT5G63160 Arabidopsis thaliana
AT5G67480 Arabidopsis thaliana
ATR0208G018 Amborella trichopoda
ATR0743G148 Amborella trichopoda
ATR0824G123 Amborella trichopoda
Atru.BG.102.p Acer truncatum
Atru.chr3.150 Acer truncatum
Atru.chr3.179 Acer truncatum
Atru.chr9.970 Acer truncatum
AUR62001253 Chenopodium quinoa
AUR62002432 Chenopodium quinoa
AUR62003996 Chenopodium quinoa
AUR62009190 Chenopodium quinoa
AUR62023756 Chenopodium quinoa
AUR62025755 Chenopodium quinoa
AUR62040250 Chenopodium quinoa
BcaB01g00820 Brassica carinata
BcaB02g09728 Brassica carinata
BcaB02g09926 Brassica carinata
BcaB07g29676 Brassica carinata
BcaC01g02562 Brassica carinata
BcaC01g02876 Brassica carinata
BcaC03g18186 Brassica carinata
BcaC05g24345 Brassica carinata
BcaC07g36839 Brassica carinata
BcaC07g39319 Brassica carinata
BcaNung02065 Brassica carinata
BcaNung02847 Brassica carinata
BcaNung02933 Brassica carinata
BcaNung06784 Brassica carinata
BolC1t00150H Brassica oleracea
BolC2t12311H Brassica oleracea
BolC3t18218H Brassica oleracea
BolC3t18599H Brassica oleracea
BolC7t46663H Brassica oleracea
BolC8t47006H Brassica oleracea
BolC8t47010H Brassica oleracea
BolC8t49964H Brassica oleracea
BolC9t58075H Brassica oleracea
BraA01t00133Z Brassica rapa
BraA02t08158Z Brassica rapa
BraA02t09189Z Brassica rapa
BraA03t15589Z Brassica rapa
BraA06t24197Z Brassica rapa
BraA06t25014Z Brassica rapa
BraA06t25940Z Brassica rapa
BraA06t26224Z Brassica rapa
BraA08t35537Z Brassica rapa
BraA10t42712Z Brassica rapa
C01p01550 Brassica napus
C02p34780 Brassica napus
C02p62520 Brassica napus
C03p59550 Brassica napus
C03p63470 Brassica napus
C07p62490 Brassica napus
C08p02110 Brassica napus
C08p02180 Brassica napus
C08p23350 Brassica napus
C08p50350 Brassica napus
CAN.G1075.27 Capsicum annuum
CAN.G176.9 Capsicum annuum
CAN.G472.54 Capsicum annuum
CAN.G993.14 Capsicum annuum
CAN.G993.15 Capsicum annuum
CANSAT01G1156 Cannabis sativa
CANSAT56G1870 Cannabis sativa
CANSAT80G2541 Cannabis sativa
CARHR005210 Cardamine hirsuta
CARHR157140 Cardamine hirsuta
CARHR246000 Cardamine hirsuta
CARHR277000 Cardamine hirsuta
CARHR277010 Cardamine hirsuta
CARHR280110 Cardamine hirsuta
Carub.0001s0504 Capsella rubella
Carub.0005s1453 Capsella rubella
Carub.0007s0265 Capsella rubella
Carub.0008s2392 Capsella rubella
Carub.0008s2699 Capsella rubella
Ca_16105_v3 Cicer arietinum L.
Ca_19436_v3 Cicer arietinum L.
Ca_24702_v3 Cicer arietinum L.
CBR_g48887 Chara braunii
Cc03_g15070 Coffea canephora
Cc04_g10750 Coffea canephora
Cc07_g07000 Coffea canephora
CDE02G3908 Ceratophyllum demersum
CDE09G0758 Ceratophyllum demersum
Cfa004121 Carpinus fangiana
Cfa008489 Carpinus fangiana
Cfa019268 Carpinus fangiana
Ciclev10020409m.g Citrus clementina
Ciclev10020762m.g Citrus clementina
Ciclev10027337m.g Citrus clementina
CiPaw.01G005600 Carya illinoinensis
CiPaw.01G199200 Carya illinoinensis
CiPaw.02G003100 Carya illinoinensis
CiPaw.02G123600 Carya illinoinensis
CiPaw.11G013800 Carya illinoinensis
CiPaw.15G157500 Carya illinoinensis
CiPaw.15G160000 Carya illinoinensis
ClCG01G017500 Citrullus lanatus
ClCG03G003310 Citrullus lanatus
ClCG04G012460 Citrullus lanatus
COL.COLO4_05699 Corchorus olitorius
COL.COLO4_11564 Corchorus olitorius
Cpa.g.sc4.32 Carica papaya
Cpa.g.sc6.28 Carica papaya
Cpa.g.sc601.2 Carica papaya
Cpa.g.sc601.3 Carica papaya
CsaV3_1G005240 Cucumis sativus L.
CsaV3_1G009120 Cucumis sativus L.
CsaV3_6G044040 Cucumis sativus L.
CSS0010346 Camellia sinensis var. sinensis
CSS0028559 Camellia sinensis var. sinensis
CSS0040162 Camellia sinensis var. sinensis
CSS0048773 Camellia sinensis var. sinensis
DCAR_010827 Daucus carota
DCAR_016431 Daucus carota
DCAR_021599 Daucus carota
DCAR_023778 Daucus carota
DCAR_025794 Daucus carota
DCAR_026199 Daucus carota
Dinv04060 Davidia involucrata
Dinv04061 Davidia involucrata
Dinv11124 Davidia involucrata
Dinv18303 Davidia involucrata
Dinv26920 Davidia involucrata
Dinv33227 Davidia involucrata
Dinv38493 Davidia involucrata
Duzib068G0640 Durio zibethinus
Duzib084G0568 Durio zibethinus
Duzib147G0695 Durio zibethinus
Duzib151G0765 Durio zibethinus
Duzib187G1778 Durio zibethinus
Duzib205G0478 Durio zibethinus
Duzib264G0971 Durio zibethinus
Duzib268G1441 Durio zibethinus
ECA232G2000 Erigeron canadensis
ECA232G2723 Erigeron canadensis
ECA238G0403 Erigeron canadensis
ECA247G2028 Erigeron canadensis
EL10Ac3g06125 Beta vulgaris
EL10Ac6g15631 Beta vulgaris
EL10Ac7g18039 Beta vulgaris
Eucgr.B00171 Eucalyptus grandis
Eucgr.H01861 Eucalyptus grandis
Eucgr.H02303 Eucalyptus grandis
Eucgr.K02768 Eucalyptus grandis
Eucgr.L00046 Eucalyptus grandis
Eucgr.L00047 Eucalyptus grandis
Eucgr.L00048 Eucalyptus grandis
FAN04G2700 Fragaria x ananassa
FAN08G3389 Fragaria x ananassa
FAN13G0247 Fragaria x ananassa
FAN18G1961 Fragaria x ananassa
FAN19G3211 Fragaria x ananassa
FAN23G1605 Fragaria x ananassa
FAN23G1775 Fragaria x ananassa
FAN26G3259 Fragaria x ananassa
FAN26G3371 Fragaria x ananassa
FAN28G1688 Fragaria x ananassa
FAN28G1807 Fragaria x ananassa
FvH4_1g00430 Fragaria vesca
FvH4_1g17510 Fragaria vesca
FvH4_5g06740 Fragaria vesca
Glyma.01G193300 Glycine max
Glyma.04G190900 Glycine max
Glyma.05G043800 Glycine max
Glyma.05G043900 Glycine max
Glyma.09G098400 Glycine max
Glyma.17G126400 Glycine max
Gohir.A02G007300 Gossypium hirsutum
Gohir.A02G007350 Gossypium hirsutum
Gohir.A02G152200 Gossypium hirsutum
Gohir.A05G328100 Gossypium hirsutum
Gohir.A07G054500 Gossypium hirsutum
Gohir.A11G048400 Gossypium hirsutum
Gohir.A11G215650 Gossypium hirsutum
Gohir.A12G187200 Gossypium hirsutum
Gohir.D02G007100 Gossypium hirsutum
Gohir.D03G028000 Gossypium hirsutum
Gohir.D05G328100 Gossypium hirsutum
Gohir.D07G058900 Gossypium hirsutum
Gohir.D11G052000 Gossypium hirsutum
Gohir.D11G207600 Gossypium hirsutum
Gohir.D12G190201 Gossypium hirsutum
Gorai.001G062300 Gossypium raimondii
Gorai.003G029700 Gossypium raimondii
Gorai.005G008300 Gossypium raimondii
Gorai.005G008500 Gossypium raimondii
Gorai.007G056400 Gossypium raimondii
Gorai.007G222700 Gossypium raimondii
Gorai.008G204000 Gossypium raimondii
Gorai.009G352000 Gossypium raimondii
GSVIVG01000126001 Vitis vinifera
GSVIVG01007583001 Vitis vinifera
GSVIVG01038198001 Vitis vinifera
HanXRQChr01g0027301 Helianthus annuus
HanXRQChr02g0035281 Helianthus annuus
HanXRQChr04g0100771 Helianthus annuus
HanXRQChr09g0272511 Helianthus annuus
HanXRQChr12g0373151 Helianthus annuus
Haze_07646 Corylus avellana
Haze_11168 Corylus avellana
Haze_15293 Corylus avellana
Hma1.2p1_0046F.1_g027480 Hydrangea macrophylla
Hma1.2p1_0730F.1_g209775 Hydrangea macrophylla
Hma1.2p1_0765F.1_g215110 Hydrangea macrophylla
HPP92_006070 Vanilla planifolia
HPP92_006074 Vanilla planifolia
HPP92_011714 Vanilla planifolia
Hund05616 Selenicereus undatus
Hund13946 Selenicereus undatus
Hund16393 Selenicereus undatus
Hund18520 Selenicereus undatus
Hund22556 Selenicereus undatus
Lalb_Chr07g0183171 Lupinus albus
Lalb_Chr09g0323561 Lupinus albus
Lalb_Chr11g0069801 Lupinus albus
Lalb_Chr12g0202031 Lupinus albus
Lalb_Chr16g0378821 Lupinus albus
Lalb_Chr16g0389231 Lupinus albus
Lj2g0017522 Lotus japonicus
Lj4A162T73 Lonicera japonica
Lj4g0025790 Lotus japonicus
Lj5A101T104 Lonicera japonica
Lj6A270T15 Lonicera japonica
Lj9A472T90 Lonicera japonica
Lsat_1_v5_gn_1_28741 Lactuca sativa
Lsat_1_v5_gn_2_83221 Lactuca sativa
Lsat_1_v5_gn_4_160860 Lactuca sativa
Lsat_1_v5_gn_4_78101 Lactuca sativa
Lsat_1_v5_gn_9_74821 Lactuca sativa
Manes.05G137682 Manihot esculenta
Manes.06G113100 Manihot esculenta
Manes.12G113350 Manihot esculenta
Manes.13G112500 Manihot esculenta
Manes.14G056500 Manihot esculenta
Mapoly0010s0173 Marchantia polymorpha
MBI07_g39639_MAGBIO Magnolia biondii
MBI07_g45919_MAGBIO Magnolia biondii
MBI10_g03803_MAGBIO Magnolia biondii
MD02G1003500 Malus domestica
MD02G1184400 Malus domestica
MD06G1161300 Malus domestica
MD14G1167000 Malus domestica
MD15G1146800 Malus domestica
Medtr3g075270 Medicago truncatula
Medtr4g104140 Medicago truncatula
Medtr4g104170 Medicago truncatula
Medtr5g015680 Medicago truncatula
MELO3C001964.2 Cucumis melo
MELO3C002318.2 Cucumis melo
MELO3C007627.2 Cucumis melo
Migut.D02036 Erythranthe guttata
Migut.H00356 Erythranthe guttata
Migut.N03051 Erythranthe guttata
Migut.O00217 Erythranthe guttata
MSTRG.11515 Avicennia marina
MSTRG.22045 Avicennia marina
MSTRG.23185 Avicennia marina
MSTRG.24560 Avicennia marina
MSTRG.2821 Avicennia marina
Nitab4.5_0000003g0900 Nicotiana tabacum
Nitab4.5_0000003g0910 Nicotiana tabacum
Nitab4.5_0000013g0250 Nicotiana tabacum
Nitab4.5_0000036g0030 Nicotiana tabacum
Nitab4.5_0000284g0090 Nicotiana tabacum
Nitab4.5_0000651g0200 Nicotiana tabacum
Nitab4.5_0001621g0030 Nicotiana tabacum
Nitab4.5_0001812g0040 Nicotiana tabacum
Nitab4.5_0001812g0080 Nicotiana tabacum
Nitab4.5_0004177g0020 Nicotiana tabacum
Nitab4.5_0006842g0010 Nicotiana tabacum
Nitab4.5_0007909g0010 Nicotiana tabacum
Nitab4.5_0013589g0010 Nicotiana tabacum
Nn1g00387 Nelumbo nucifera
Nn1g02062 Nelumbo nucifera
Nn1g09521 Nelumbo nucifera
Nn3g16629 Nelumbo nucifera
Nn4g22518 Nelumbo nucifera
Nn5g30561 Nelumbo nucifera
Nn7g37488 Nelumbo nucifera
Oeu014240.1 Olea europaea
Oeu015705.1 Olea europaea
Oeu022453.1 Olea europaea
Oeu023465.1 Olea europaea
Oeu044600.1 Olea europaea
Oeu053493.1 Olea europaea
Oeu063278.2 Olea europaea
Os01g0893400 Oryza sativa ssp. japonica
Os01g0908200 Oryza sativa ssp. japonica
Os02g0596700 Oryza sativa ssp. japonica
Os04g0482300 Oryza sativa ssp. japonica
Peaxi162Scf00075g00124 Petunia axillaris
Peaxi162Scf00089g01020 Petunia axillaris
Peaxi162Scf00364g00015 Petunia axillaris
Peaxi162Scf00449g00215 Petunia axillaris
Peaxi162Scf00483g00315 Petunia axillaris
Peaxi162Scf00763g00043 Petunia axillaris
PGR004G1531 Punica granatum
PGR042G3665 Punica granatum
PGR044G2746 Punica granatum
PGR083G1457 Punica granatum
PGR102G0216 Punica granatum
PGSC0003DMG400005366 Solanum tuberosum
PGSC0003DMG400015229 Solanum tuberosum
PGSC0003DMG400021422 Solanum tuberosum
PGSC0003DMG400025221 Solanum tuberosum
PGSC0003DMG401026984 Solanum tuberosum
PGSC0003DMG402026984 Solanum tuberosum
Phvul.002G011700 Phaseolus vulgaris
Phvul.003G207300 Phaseolus vulgaris
Phvul.009G170600 Phaseolus vulgaris
Potri.007G055100 Populus trichocarpa
Potri.007G140400 Populus trichocarpa
Potri.012G091400 Populus trichocarpa
Potri.015G087700 Populus trichocarpa
Potri.017G009700 Populus trichocarpa
Pp3c15_21700 Physcomitrium patens
Pp3c24_17930 Physcomitrium patens
Pp3c9_20540 Physcomitrium patens
Prupe.5G161100 Prunus persica
Prupe.6G222100 Prunus persica
Prupe.7G267800 Prunus persica
Psat2g170960 Pisum sativum
Psat4g049640 Pisum sativum
Psat4g062920 Pisum sativum
Psat5g141080 Pisum sativum
PSO067G0027 Papaver somniferum
PSO173G0047 Papaver somniferum
PSO478G1742 Papaver somniferum
PSO541G2809 Papaver somniferum
PSO566G0047 Papaver somniferum
PSO675G1355 Papaver somniferum
PSO675G3628 Papaver somniferum
PSO782G0980 Papaver somniferum
PSO824G0066 Papaver somniferum
PSO824G0070 Papaver somniferum
PSO824G0071 Papaver somniferum
QL10p005808 Quercus lobata
QL10p058711 Quercus lobata
QL10p059101 Quercus lobata
RcHm_v2.0_Chr2g0084941 Rosa chinensis
RcHm_v2.0_Chr2g0107741 Rosa chinensis
RcHm_v2.0_Chr7g0191831 Rosa chinensis
Rhsim02G0086300 Rhododendron simsii
Rhsim02G0087000 Rhododendron simsii
Rhsim08G0182200 Rhododendron simsii
Rhsim10G0101000 Rhododendron simsii
Rhsim12G0170700 Rhododendron simsii
Sabra01G0117600 Salix brachista
Sabra07G0047500 Salix brachista
Sabra12G0066000 Salix brachista
Sabra15G0110900 Salix brachista
Sabra16G0283600 Salix brachista
Sabra17G0009100 Salix brachista
SalBow3G0836 Salvia bowleyana
SalBow3G2502 Salvia bowleyana
SalBow5G2476 Salvia bowleyana
SalBow6G3194 Salvia bowleyana
SalBow8G4305 Salvia bowleyana
Sc03g0002330 Simmondsia chinensis
Sc04g0001160 Simmondsia chinensis
Sed0001752 Sechium edule
Sed0011198 Sechium edule
Sed0014408 Sechium edule
Sed0017305 Sechium edule
Sed0021827 Sechium edule
Sed0026630 Sechium edule
SEGI_28496 Sequoiadendron giganteum
SGA_v2.0_scaffold72G24080 Striga asiatica
SGA_v2.0_scaffold90G27786 Striga asiatica
SMO141G0266 Selaginella moellendorffii
Solyc02g092460.3 Solanum lycopersicum
Solyc03g111710.3 Solanum lycopersicum
Solyc06g071820.3 Solanum lycopersicum
Solyc06g071830.2 Solanum lycopersicum
Solyc08g014440.4 Solanum lycopersicum
Solyc12g019420.3 Solanum lycopersicum
Sopen02g037020 Solanum pennellii
Sopen03g030830 Solanum pennellii
Sopen06g028110 Solanum pennellii
Sopen06g028120 Solanum pennellii
Sopen08g005430 Solanum pennellii
Sp1g04510 Schrenkiella parvula
Sp2g26290 Schrenkiella parvula
Sp2g29170 Schrenkiella parvula
Sp5g13690 Schrenkiella parvula
Sp7g35270 Schrenkiella parvula
TAR362G0202 Trochodendron aralioides
TAR374G1354 Trochodendron aralioides
TAR376G0036 Trochodendron aralioides
TAR381G1065 Trochodendron aralioides
TAR622G1023 Trochodendron aralioides
TAR628G0985 Trochodendron aralioides
THA.LOC104798961 Tarenaya hassleriana
THA.LOC104800926 Tarenaya hassleriana
THA.LOC104807628 Tarenaya hassleriana
THA.LOC104821223 Tarenaya hassleriana
THA.LOC104821496 Tarenaya hassleriana
Thecc.01G071500 Theobroma cacao
Thecc.03G119700 Theobroma cacao
Thecc.04G160300 Theobroma cacao
Thhalv10004392m.g Eutrema salsugineum
Thhalv10004447m.g Eutrema salsugineum
Thhalv10007799m.g Eutrema salsugineum
Thhalv10010463m.g Eutrema salsugineum
Thhalv10025450m.g Eutrema salsugineum
TPR.G34861 Trifolium pratense
TPR.G37518 Trifolium pratense
TWI09G1316 Tripterygium wilfordii
TWI38G1815 Tripterygium wilfordii
TWI39G0224 Tripterygium wilfordii
unitig_21.g20474 Utricularia gibba
unitig_8.g3638 Utricularia gibba
unitig_8.g3879 Utricularia gibba
vmacro05401 Vaccinium macrocarpon
vmacro15703 Vaccinium macrocarpon
vmacro16693 Vaccinium macrocarpon
vmacro19260 Vaccinium macrocarpon
VMungo1215G2622 Vigna mungo
VMungo1215G3438 Vigna mungo
VMungo1309G2448 Vigna mungo
Zm00001eb144120 Zea mays
Zm00001eb145030 Zea mays
Zm00001eb246190 Zea mays
Zm00001eb425100 Zea mays

User provided reference genes

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