Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37920 Brassica napus
A02p25760 Brassica napus
A05p15800 Brassica napus
A08p02280 Brassica napus
A08p37010 Brassica napus
A10p02690 Brassica napus
Aa31LG2G2660 Aethionema arabicum
Aa31LG5G6880 Aethionema arabicum
Aa31LG8G3310 Aethionema arabicum
Aa31LG8G3320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1085 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1086 Anthoceros agrestis
Actinidia21687 Actinidia chinensis
Actinidia25141 Actinidia chinensis
Actinidia32721 Actinidia chinensis
Actinidia36584 Actinidia chinensis
Ah.02g118260 Amaranthus hybridus
Ah.08g220480 Amaranthus hybridus
AL1G13890 Arabidopsis lyrata
AL3G28860 Arabidopsis lyrata
AL4G24310 Arabidopsis lyrata
Aqoxy1G00712 Aquilegia oxysepala
Aqoxy1G00713 Aquilegia oxysepala
Aqoxy6G00133 Aquilegia oxysepala
Aqoxy7G01569 Aquilegia oxysepala
Aqoxy7G01570 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BHT4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CWP525 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTFK8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N50YU5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB0591 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQH6NL Arachis hypogaea
AT1G04290 Arabidopsis thaliana
AT1G52191 Arabidopsis thaliana
AT2G29590 Arabidopsis thaliana
AT3G16175 Arabidopsis thaliana
ATR0152G011 Amborella trichopoda
ATR0245G001 Amborella trichopoda
ATR0315G150 Amborella trichopoda
ATR0618G330 Amborella trichopoda
Atru.chr3.1473 Acer truncatum
Atru.chr5.1335 Acer truncatum
Atru.chr5.1336 Acer truncatum
Atru.chr5.1337 Acer truncatum
Atru.chr5.1338 Acer truncatum
Atru.chr5.1339 Acer truncatum
AUR62000623 Chenopodium quinoa
AUR62001693 Chenopodium quinoa
AUR62001697 Chenopodium quinoa
AUR62006976 Chenopodium quinoa
AUR62020085 Chenopodium quinoa
AUR62020089 Chenopodium quinoa
AUR62025524 Chenopodium quinoa
AUR62025573 Chenopodium quinoa
AUR62044092 Chenopodium quinoa
AUR62044286 Chenopodium quinoa
AUR62044386 Chenopodium quinoa
BcaB02g10265 Brassica carinata
BcaB04g17166 Brassica carinata
BcaB06g25710 Brassica carinata
BcaC05g24455 Brassica carinata
BcaC07g36919 Brassica carinata
BcaC07g36921 Brassica carinata
BcaC08g43972 Brassica carinata
BcaNung07318 Brassica carinata
BolC1t04778H Brassica oleracea
BolC2t10117H Brassica oleracea
BolC3t21371H Brassica oleracea
BolC3t21372H Brassica oleracea
BolC4t23649H Brassica oleracea
BolC5t29027H Brassica oleracea
BolC6t36542H Brassica oleracea
BolC8t46900H Brassica oleracea
BraA01t03852Z Brassica rapa
BraA05t20493Z Brassica rapa
BraA08t32273Z Brassica rapa
BraA08t35601Z Brassica rapa
BraA10t42538Z Brassica rapa
C01p48100 Brassica napus
C02p41080 Brassica napus
C03p90470 Brassica napus
C04p21230 Brassica napus
C05p02480 Brassica napus
C06p13700 Brassica napus
C08p01000 Brassica napus
CAN.G394.100 Capsicum annuum
CAN.G5.9 Capsicum annuum
CANSAT54G0012 Cannabis sativa
CANSAT54G0936 Cannabis sativa
CANSAT54G1716 Cannabis sativa
CANSAT54G2298 Cannabis sativa
CARHR003620 Cardamine hirsuta
CARHR091340 Cardamine hirsuta
CARHR122930 Cardamine hirsuta
Carub.0001s0348 Capsella rubella
Carub.0001s4116 Capsella rubella
Carub.0003s1592 Capsella rubella
Carub.0004s1065 Capsella rubella
Ca_05578_v3 Cicer arietinum L.
Ca_17039_v3 Cicer arietinum L.
Ca_17041_v3 Cicer arietinum L.
Cc00_g04340 Coffea canephora
Cc00_g04370 Coffea canephora
Cc01_g13790 Coffea canephora
CDE02G4323 Ceratophyllum demersum
CDE04G0966 Ceratophyllum demersum
CDE04G1088 Ceratophyllum demersum
CDE04G2932 Ceratophyllum demersum
Cfa011640 Carpinus fangiana
Cfa020917 Carpinus fangiana
Ciclev10022724m.g Citrus clementina
Ciclev10026677m.g Citrus clementina
Ciclev10029463m.g Citrus clementina
CiPaw.01G235000 Carya illinoinensis
CiPaw.13G082100 Carya illinoinensis
CiPaw.16G119200 Carya illinoinensis
ClCG02G000190 Citrullus lanatus
ClCG02G000220 Citrullus lanatus
ClCG02G019730 Citrullus lanatus
COL.COLO4_19099 Corchorus olitorius
COL.COLO4_30444 Corchorus olitorius
COL.COLO4_30445 Corchorus olitorius
COL.COLO4_30446 Corchorus olitorius
COL.COLO4_30447 Corchorus olitorius
COL.COLO4_30449 Corchorus olitorius
COL.COLO4_33533 Corchorus olitorius
COL.COLO4_33534 Corchorus olitorius
Cpa.g.sc138.30 Carica papaya
Cpa.g.sc9.218 Carica papaya
Cpa.g.sc9.219 Carica papaya
Cre07.g323150 Chlamydomonas reinhardtii
CsaV3_2G019620 Cucumis sativus L.
CsaV3_6G016430 Cucumis sativus L.
CSS0000159 Camellia sinensis var. sinensis
CSS0016525 Camellia sinensis var. sinensis
CSS0019650 Camellia sinensis var. sinensis
CSS0035664 Camellia sinensis var. sinensis
DCAR_009618 Daucus carota
DCAR_018943 Daucus carota
Dinv04535 Davidia involucrata
Dinv20721 Davidia involucrata
Dinv28605 Davidia involucrata
Duzib147G0745 Durio zibethinus
Duzib150G1063 Durio zibethinus
Duzib160G0910 Durio zibethinus
Duzib168G0720 Durio zibethinus
Duzib187G1216 Durio zibethinus
Duzib192G0931 Durio zibethinus
Duzib235G0321 Durio zibethinus
Duzib235G1116 Durio zibethinus
Duzib264G0962 Durio zibethinus
Duzib264G1205 Durio zibethinus
ECA238G3031 Erigeron canadensis
ECA247G1502 Erigeron canadensis
ECA247G1945 Erigeron canadensis
ECA247G2268 Erigeron canadensis
EL10Ac4g09746 Beta vulgaris
EL10Ac7g16116 Beta vulgaris
EL10Ac7g16117 Beta vulgaris
EL10Ac7g17954 Beta vulgaris
Eucgr.F03046 Eucalyptus grandis
Eucgr.I00015 Eucalyptus grandis
Eucgr.J01944 Eucalyptus grandis
FAN05G3284 Fragaria x ananassa
FAN07G2162 Fragaria x ananassa
FAN11G1207 Fragaria x ananassa
FAN14G0254 Fragaria x ananassa
FAN16G0327 Fragaria x ananassa
FAN16G1064 Fragaria x ananassa
FAN21G1631 Fragaria x ananassa
FAN21G2022 Fragaria x ananassa
FAN25G3843 Fragaria x ananassa
FvH4_3g11670 Fragaria vesca
FvH4_3g37930 Fragaria vesca
FvH4_3g37940 Fragaria vesca
FvH4_3g37970 Fragaria vesca
FvH4_3g37990 Fragaria vesca
FvH4_3g38000 Fragaria vesca
FvH4_3g38010 Fragaria vesca
FvH4_3g38050 Fragaria vesca
FvH4_3g38060 Fragaria vesca
FvH4_6g31870 Fragaria vesca
Glyma.02G224300 Glycine max
Glyma.04G204200 Glycine max
Glyma.04G204300 Glycine max
Glyma.07G018900 Glycine max
Glyma.08G204100 Glycine max
Gohir.A03G048700 Gossypium hirsutum
Gohir.A05G090500 Gossypium hirsutum
Gohir.A05G090600 Gossypium hirsutum
Gohir.A05G132100 Gossypium hirsutum
Gohir.A06G080866 Gossypium hirsutum
Gohir.A09G081501 Gossypium hirsutum
Gohir.A09G081600 Gossypium hirsutum
Gohir.A09G081750 Gossypium hirsutum
Gohir.A09G081901 Gossypium hirsutum
Gohir.A09G082000 Gossypium hirsutum
Gohir.A10G082000 Gossypium hirsutum
Gohir.A10G082200 Gossypium hirsutum
Gohir.A10G157432 Gossypium hirsutum
Gohir.A11G058700 Gossypium hirsutum
Gohir.A12G002400 Gossypium hirsutum
Gohir.D03G118400 Gossypium hirsutum
Gohir.D05G091500 Gossypium hirsutum
Gohir.D05G091600 Gossypium hirsutum
Gohir.D05G131800 Gossypium hirsutum
Gohir.D09G081600 Gossypium hirsutum
Gohir.D09G081701 Gossypium hirsutum
Gohir.D09G081800 Gossypium hirsutum
Gohir.D10G069533 Gossypium hirsutum
Gohir.D10G069566 Gossypium hirsutum
Gohir.D10G110250 Gossypium hirsutum
Gohir.D11G062900 Gossypium hirsutum
Gohir.D12G002100 Gossypium hirsutum
Gorai.003G124800 Gossypium raimondii
Gorai.006G097200 Gossypium raimondii
Gorai.006G097300 Gossypium raimondii
Gorai.006G097400 Gossypium raimondii
Gorai.007G067900 Gossypium raimondii
Gorai.008G001500 Gossypium raimondii
Gorai.009G094000 Gossypium raimondii
Gorai.009G094100 Gossypium raimondii
Gorai.009G135500 Gossypium raimondii
Gorai.010G093600 Gossypium raimondii
Gorai.011G073500 Gossypium raimondii
Gorai.011G073600 Gossypium raimondii
Gorai.011G121500 Gossypium raimondii
GSVIVG01000239001 Vitis vinifera
GSVIVG01000240001 Vitis vinifera
GSVIVG01017055001 Vitis vinifera
GSVIVG01024800001 Vitis vinifera
HanXRQChr02g0032311 Helianthus annuus
HanXRQChr08g0237251 Helianthus annuus
HanXRQChr13g0394841 Helianthus annuus
HanXRQChr14g0434441 Helianthus annuus
HanXRQChr14g0434451 Helianthus annuus
HanXRQChr14g0434461 Helianthus annuus
HanXRQChr15g0492661 Helianthus annuus
Haze_19350 Corylus avellana
Haze_24246 Corylus avellana
Hma1.2p1_0227F.1_g096190 Hydrangea macrophylla
Hma1.2p1_0227F.1_g096200 Hydrangea macrophylla
Hma1.2p1_0227F.1_g096210 Hydrangea macrophylla
Hma1.2p1_0296F.1_g116940 Hydrangea macrophylla
Hma1.2p1_1195F.1_g265910 Hydrangea macrophylla
Hma1.2p1_1195F.1_g265920 Hydrangea macrophylla
HPP92_003122 Vanilla planifolia
HPP92_005666 Vanilla planifolia
HPP92_023909 Vanilla planifolia
HPP92_023916 Vanilla planifolia
Hund04895 Selenicereus undatus
Hund04896 Selenicereus undatus
Hund07184 Selenicereus undatus
Hund21760 Selenicereus undatus
Lalb_Chr01g0013011 Lupinus albus
Lalb_Chr04g0252391 Lupinus albus
Lalb_Chr04g0262821 Lupinus albus
Lalb_Chr11g0068901 Lupinus albus
Lalb_Chr23g0272781 Lupinus albus
Lalb_Chr24g0395961 Lupinus albus
Lj1g0011871 Lotus japonicus
Lj3g0003406 Lotus japonicus
Lj3g0004516 Lotus japonicus
Lj3g0006474 Lotus japonicus
Lj4A820T48 Lonicera japonica
Lj6P130T6 Lonicera japonica
Lj6P172T2 Lonicera japonica
LjContig00155g0020500 Lotus japonicus
Lsat_1_v5_gn_1_35340 Lactuca sativa
Lsat_1_v5_gn_2_39360 Lactuca sativa
Lsat_1_v5_gn_9_25641 Lactuca sativa
Lsat_1_v5_gn_9_25661 Lactuca sativa
Manes.04G130600 Manihot esculenta
Manes.11G037300 Manihot esculenta
Manes.13G153200 Manihot esculenta
Manes.17G018900 Manihot esculenta
MBI01_g30864_MAGBIO Magnolia biondii
MBI14_g32945_MAGBIO Magnolia biondii
MCO13G440 Micromonas commoda
MD03G1077300 Malus domestica
MD03G1077400 Malus domestica
MD03G1077500 Malus domestica
MD05G1260500 Malus domestica
MD08G1031500 Malus domestica
MD10G1239800 Malus domestica
MD11G1081500 Malus domestica
MD11G1081600 Malus domestica
MD11G1081700 Malus domestica
MD11G1081800 Malus domestica
MD11G1081900 Malus domestica
Medtr3g098100 Medicago truncatula
Medtr3g098120 Medicago truncatula
Medtr3g098130 Medicago truncatula
Medtr3g098140 Medicago truncatula
Medtr3g098160 Medicago truncatula
Medtr3g098170 Medicago truncatula
Medtr3g098180 Medicago truncatula
Medtr5g069640 Medicago truncatula
MELO3C023208.2 Cucumis melo
MELO3C023210.2 Cucumis melo
MELO3C025874.2 Cucumis melo
Migut.D00863 Erythranthe guttata
Migut.H02538 Erythranthe guttata
MSTRG.21225 Avicennia marina
MSTRG.23237 Avicennia marina
Nitab4.5_0000744g0150 Nicotiana tabacum
Nitab4.5_0000744g0160 Nicotiana tabacum
Nitab4.5_0000835g0010 Nicotiana tabacum
Nitab4.5_0000835g0020 Nicotiana tabacum
Nitab4.5_0000905g0100 Nicotiana tabacum
Nitab4.5_0006242g0010 Nicotiana tabacum
Nitab4.5_0010287g0020 Nicotiana tabacum
Nitab4.5_0010287g0040 Nicotiana tabacum
Nitab4.5_0026685g0010 Nicotiana tabacum
Nn1g08391 Nelumbo nucifera
Nn2g11367 Nelumbo nucifera
Nn3g18108 Nelumbo nucifera
Nn3g18109 Nelumbo nucifera
Nn3g18113 Nelumbo nucifera
Nn5g27744 Nelumbo nucifera
Nn5g27745 Nelumbo nucifera
Oeu035008.1 Olea europaea
Os01g0229500 Oryza sativa ssp. japonica
Os01g0229600 Oryza sativa ssp. japonica
Os01g0882000 Oryza sativa ssp. japonica
Os02g0521700 Oryza sativa ssp. japonica
Os04g0436100 Oryza sativa ssp. japonica
Peaxi162Scf00525g00618 Petunia axillaris
Peaxi162Scf00651g00637 Petunia axillaris
Peaxi162Scf01058g00147 Petunia axillaris
Peaxi162Scf01058g00148 Petunia axillaris
Peaxi162Scf01058g00149 Petunia axillaris
PGR091G0007 Punica granatum
PGR102G2935 Punica granatum
PGR102G3087 Punica granatum
PGR119G0063 Punica granatum
PGR119G0336 Punica granatum
PGSC0003DMG400023081 Solanum tuberosum
PGSC0003DMG400030433 Solanum tuberosum
PGSC0003DMG400030434 Solanum tuberosum
Phvul.008G263600 Phaseolus vulgaris
Phvul.009G160000 Phaseolus vulgaris
Phvul.010G148100 Phaseolus vulgaris
Potri.003G051900 Populus trichocarpa
Potri.004G134066 Populus trichocarpa
Potri.004G134132 Populus trichocarpa
Potri.009G042100 Populus trichocarpa
PRCOL_00001028 Prasinoderma coloniale
Prupe.2G260400 Prunus persica
Prupe.4G104800 Prunus persica
Prupe.4G105000 Prunus persica
Prupe.5G159500 Prunus persica
Prupe.6G061800 Prunus persica
Prupe.6G061900 Prunus persica
Prupe.6G062000 Prunus persica
Prupe.6G062100 Prunus persica
Prupe.6G062200 Prunus persica
Prupe.6G062300 Prunus persica
Psat2g059720 Pisum sativum
Psat5g056320 Pisum sativum
Psat5g056360 Pisum sativum
PSO135G0028 Papaver somniferum
PSO210G2973 Papaver somniferum
PSO210G4437 Papaver somniferum
PSO384G3494 Papaver somniferum
PSO566G0088 Papaver somniferum
PSO566G0099 Papaver somniferum
PSO566G0103 Papaver somniferum
PSO566G0221 Papaver somniferum
PSO724G0406 Papaver somniferum
PSO782G1332 Papaver somniferum
PSO782G2566 Papaver somniferum
PSO782G4863 Papaver somniferum
QL01p027096 Quercus lobata
QL01p027101 Quercus lobata
QL01p027126 Quercus lobata
QL01p027139 Quercus lobata
QL05p021486 Quercus lobata
QL05p021499 Quercus lobata
QL10p037230 Quercus lobata
QL10p038097 Quercus lobata
QL93p0183_0037 Quercus lobata
RcHm_v2.0_Chr2g0139201 Rosa chinensis
RcHm_v2.0_Chr5g0068361 Rosa chinensis
RcHm_v2.0_Chr5g0068371 Rosa chinensis
RcHm_v2.0_Chr5g0068381 Rosa chinensis
RcHm_v2.0_Chr5g0068391 Rosa chinensis
RcHm_v2.0_Chr5g0068401 Rosa chinensis
RcHm_v2.0_Chr5g0068411 Rosa chinensis
RcHm_v2.0_Chr5g0068441 Rosa chinensis
Rhsim04G0138500 Rhododendron simsii
Rhsim08G0128700 Rhododendron simsii
Rhsim08G0224600 Rhododendron simsii
Rhsim13G0073300 Rhododendron simsii
Rhsim13G0073400 Rhododendron simsii
Rhsim13G0073500 Rhododendron simsii
Sabra03G0027100 Salix brachista
Sabra04G0084000 Salix brachista
Sabra04G0084100 Salix brachista
Sabra09G0029600 Salix brachista
SalBow6G0921 Salvia bowleyana
SalBow6G3098 Salvia bowleyana
Sc12g0000970 Simmondsia chinensis
Sc16g0009830 Simmondsia chinensis
Sed0017259 Sechium edule
Sed0019998 Sechium edule
SEGI_04421 Sequoiadendron giganteum
SEGI_10406 Sequoiadendron giganteum
SEGI_17469 Sequoiadendron giganteum
SEGI_29144 Sequoiadendron giganteum
SEGI_33501 Sequoiadendron giganteum
SEGI_37226 Sequoiadendron giganteum
SEGI_37420 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18838 Striga asiatica
SMO347G0593 Selaginella moellendorffii
Solyc06g076680.4 Solanum lycopersicum
Solyc06g076690.4 Solanum lycopersicum
Solyc09g005390.3 Solanum lycopersicum
Sopen06g033070 Solanum pennellii
Sopen06g033080 Solanum pennellii
Sopen09g001340 Solanum pennellii
Sp1g03100 Schrenkiella parvula
Sp3g14540 Schrenkiella parvula
Sp4g12320 Schrenkiella parvula
TAR623G1433 Trochodendron aralioides
TAR626G0296 Trochodendron aralioides
TAR628G0149 Trochodendron aralioides
THA.LOC104800718 Tarenaya hassleriana
THA.LOC104810529 Tarenaya hassleriana
THA.LOC104815522 Tarenaya hassleriana
THA.LOC104819478 Tarenaya hassleriana
Thecc.01G147300 Theobroma cacao
Thecc.01G147500 Theobroma cacao
Thecc.06G093300 Theobroma cacao
Thecc.06G093400 Theobroma cacao
Thecc.06G093500 Theobroma cacao
Thecc.09G306600 Theobroma cacao
Thecc.K0003500 Theobroma cacao
Thhalv10008953m.g Eutrema salsugineum
Thhalv10012235m.g Eutrema salsugineum
Thhalv10012304m.g Eutrema salsugineum
Thhalv10017356m.g Eutrema salsugineum
Thhalv10021690m.g Eutrema salsugineum
TPR.G24033 Trifolium pratense
TPR.G7789 Trifolium pratense
TPR.G7793 Trifolium pratense
TPR.G7797 Trifolium pratense
TPR.G7798 Trifolium pratense
TWI31G0243 Tripterygium wilfordii
TWI31G0340 Tripterygium wilfordii
TWI31G0984 Tripterygium wilfordii
TWI75G0298 Tripterygium wilfordii
TWI75G1037 Tripterygium wilfordii
TWI75G1181 Tripterygium wilfordii
TWI79G1600 Tripterygium wilfordii
unitig_37.g12831 Utricularia gibba
vmacro17790 Vaccinium macrocarpon
vmacro18880 Vaccinium macrocarpon
VMungo0331G1603 Vigna mungo
VMungo0647G0002 Vigna mungo
VMungo1309G1682 Vigna mungo
Zm00001eb024730 Zea mays
Zm00001eb036370 Zea mays
Zm00001eb073820 Zea mays
Zm00001eb082470 Zea mays
Zm00001eb098780 Zea mays
Zm00001eb109700 Zea mays
Zm00001eb119310 Zea mays
Zm00001eb194720 Zea mays
Zm00001eb305130 Zea mays
Zm00001eb422790 Zea mays
Zm00001eb434530 Zea mays

User provided reference genes

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