Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17790 Brassica napus
A07p37840 Brassica napus
A07p40120 Brassica napus
A09p29360 Brassica napus
A09p32410 Brassica napus
Aa31LG4G4570 Aethionema arabicum
Aa31LG4G8940 Aethionema arabicum
Aa31LG5G9080 Aethionema arabicum
Aa31LG6G8280 Aethionema arabicum
Aa31LG9G15010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4090 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2091 Anthoceros agrestis
Actinidia04743 Actinidia chinensis
Actinidia06214 Actinidia chinensis
Actinidia22000 Actinidia chinensis
Actinidia26397 Actinidia chinensis
Actinidia40460 Actinidia chinensis
Ah.05g168200 Amaranthus hybridus
Ah.09g226330 Amaranthus hybridus
Ah.09g226340 Amaranthus hybridus
Ah.12g065000 Amaranthus hybridus
AL1G48590 Arabidopsis lyrata
AL2G31260 Arabidopsis lyrata
AL2G34180 Arabidopsis lyrata
AL4G20030 Arabidopsis lyrata
AL6G43400 Arabidopsis lyrata
Aqoxy6G00430 Aquilegia oxysepala
Aqoxy7G03725 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3M5TZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4EC4CX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.54YKSM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.73D391 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8WED6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9TQH81 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F76PC0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4G0K4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GT1I17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZZ31L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVHQ42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJ8FJQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KR5G4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6T0BS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6L6BX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTIT2S Arachis hypogaea
AT1G71697 Arabidopsis thaliana
AT1G74320 Arabidopsis thaliana
AT2G26830 Arabidopsis thaliana
AT4G09760 Arabidopsis thaliana
ATR0322G010 Amborella trichopoda
ATR1156G060 Amborella trichopoda
Atru.chr12.1250 Acer truncatum
Atru.chr13.1998 Acer truncatum
Atru.chr7.1215 Acer truncatum
AUR62001068 Chenopodium quinoa
AUR62011113 Chenopodium quinoa
AUR62026631 Chenopodium quinoa
AUR62031720 Chenopodium quinoa
AUR62032607 Chenopodium quinoa
AUR62033491 Chenopodium quinoa
AUR62034888 Chenopodium quinoa
BcaB01g01426 Brassica carinata
BcaB03g15614 Brassica carinata
BcaB07g33033 Brassica carinata
BcaC02g10832 Brassica carinata
BcaC04g20973 Brassica carinata
BcaC08g43812 Brassica carinata
BcaC08g45764 Brassica carinata
BcaC08g46595 Brassica carinata
BcaC08g46862 Brassica carinata
BolC4t23972H Brassica oleracea
BolC6t36331H Brassica oleracea
BolC6t38667H Brassica oleracea
BolC6t39624H Brassica oleracea
BolC6t39877H Brassica oleracea
BolC9t56572H Brassica oleracea
BraA07t29498Z Brassica rapa
BraA07t31348Z Brassica rapa
BraA07t31557Z Brassica rapa
BraA09t38503Z Brassica rapa
BraA09t38781Z Brassica rapa
C04p24660 Brassica napus
C06p11950 Brassica napus
C06p35460 Brassica napus
C06p45740 Brassica napus
C06p48490 Brassica napus
C09p37420 Brassica napus
CAN.G1252.4 Capsicum annuum
CAN.G144.1 Capsicum annuum
CAN.G1757.2 Capsicum annuum
CAN.G954.22 Capsicum annuum
CANSAT11G1188 Cannabis sativa
CARHR033540 Cardamine hirsuta
CARHR067580 Cardamine hirsuta
CARHR119010 Cardamine hirsuta
CARHR260770 Cardamine hirsuta
CARHR260780 Cardamine hirsuta
CARHR291090 Cardamine hirsuta
Carub.0001s3217 Capsella rubella
Carub.0002s1846 Capsella rubella
Carub.0002s2110 Capsella rubella
Carub.0004s0730 Capsella rubella
Carub.0006s2823 Capsella rubella
Ca_03162_v3 Cicer arietinum L.
Ca_04664_v3 Cicer arietinum L.
Ca_10659_v3 Cicer arietinum L.
Ca_14230_v3 Cicer arietinum L.
Ca_14238_v3 Cicer arietinum L.
Ca_24020_v3 Cicer arietinum L.
CBR_g19107 Chara braunii
CBR_g52226 Chara braunii
CBR_g57041 Chara braunii
Cc06_g08690 Coffea canephora
Cc09_g07310 Coffea canephora
Cc10_g15350 Coffea canephora
CDE07G0693 Ceratophyllum demersum
CDE07G1485 Ceratophyllum demersum
Cfa003355 Carpinus fangiana
Cfa010956 Carpinus fangiana
Cfa019823 Carpinus fangiana
Ciclev10001575m.g Citrus clementina
Ciclev10001624m.g Citrus clementina
Ciclev10008632m.g Citrus clementina
CiPaw.03G242900 Carya illinoinensis
CiPaw.14G010100 Carya illinoinensis
CiPaw.15G012200 Carya illinoinensis
CiPaw.16G008200 Carya illinoinensis
ClCG05G014260 Citrullus lanatus
ClCG05G027010 Citrullus lanatus
ClCG08G003060 Citrullus lanatus
ClCG09G010230 Citrullus lanatus
COL.COLO4_05615 Corchorus olitorius
COL.COLO4_05782 Corchorus olitorius
COL.COLO4_13739 Corchorus olitorius
Cpa.g.sc26.101 Carica papaya
Cpa.g.sc26.102 Carica papaya
Cpa.g.sc26.103 Carica papaya
Cpa.g.sc75.48 Carica papaya
Cre06.g291600 Chlamydomonas reinhardtii
CsaV3_5G036950 Cucumis sativus L.
CsaV3_6G002870 Cucumis sativus L.
CsaV3_7G024460 Cucumis sativus L.
CSS0001810 Camellia sinensis var. sinensis
CSS0001967 Camellia sinensis var. sinensis
CSS0003288 Camellia sinensis var. sinensis
CSS0010774 Camellia sinensis var. sinensis
CSS0028454 Camellia sinensis var. sinensis
CSS0040252 Camellia sinensis var. sinensis
CSS0041205 Camellia sinensis var. sinensis
CSS0050397 Camellia sinensis var. sinensis
DCAR_014319 Daucus carota
DCAR_014738 Daucus carota
DCAR_014874 Daucus carota
DCAR_032125 Daucus carota
Dinv02558 Davidia involucrata
Dinv32001 Davidia involucrata
Dinv36539 Davidia involucrata
Dinv41029 Davidia involucrata
Dinv41523 Davidia involucrata
Dinv41524 Davidia involucrata
Duzib093G1002 Durio zibethinus
Duzib114G0291 Durio zibethinus
Duzib150G0117 Durio zibethinus
Duzib168G1530 Durio zibethinus
ECA236G0859 Erigeron canadensis
ECA240G0392 Erigeron canadensis
ECA246G2580 Erigeron canadensis
EL10Ac1g01609 Beta vulgaris
EL10Ac2g02747 Beta vulgaris
EL10Ac2g02749 Beta vulgaris
EL10Ac8g18630 Beta vulgaris
Eucgr.C01140 Eucalyptus grandis
Eucgr.C01144 Eucalyptus grandis
Eucgr.F04176 Eucalyptus grandis
Eucgr.G00961 Eucalyptus grandis
Eucgr.G03204 Eucalyptus grandis
FAN03G3467 Fragaria x ananassa
FAN06G2598 Fragaria x ananassa
FAN15G1323 Fragaria x ananassa
FAN19G1565 Fragaria x ananassa
FAN20G0307 Fragaria x ananassa
FAN23G0800 Fragaria x ananassa
FAN24G2393 Fragaria x ananassa
FAN26G1748 Fragaria x ananassa
FAN27G3364 Fragaria x ananassa
FAN28G2560 Fragaria x ananassa
FvH4_1g03540 Fragaria vesca
FvH4_2g12980 Fragaria vesca
FvH4_7g03960 Fragaria vesca
Glyma.02G078500 Glycine max
Glyma.04G132000 Glycine max
Glyma.04G148300 Glycine max
Glyma.06G216800 Glycine max
Glyma.06G309300 Glycine max
Glyma.10G221200 Glycine max
Glyma.13G189900 Glycine max
Glyma.20G170300 Glycine max
Gohir.A05G246700 Gossypium hirsutum
Gohir.A05G270932 Gossypium hirsutum
Gohir.A06G057000 Gossypium hirsutum
Gohir.A06G111400 Gossypium hirsutum
Gohir.A07G035300 Gossypium hirsutum
Gohir.A08G239100 Gossypium hirsutum
Gohir.A10G190000 Gossypium hirsutum
Gohir.A11G034501 Gossypium hirsutum
Gohir.D05G248200 Gossypium hirsutum
Gohir.D05G273200 Gossypium hirsutum
Gohir.D06G055300 Gossypium hirsutum
Gohir.D06G115800 Gossypium hirsutum
Gohir.D07G039300 Gossypium hirsutum
Gohir.D08G259800 Gossypium hirsutum
Gohir.D10G197900 Gossypium hirsutum
Gorai.001G041400 Gossypium raimondii
Gorai.004G277600 Gossypium raimondii
Gorai.009G259200 Gossypium raimondii
Gorai.009G286400 Gossypium raimondii
Gorai.010G064600 Gossypium raimondii
Gorai.010G133400 Gossypium raimondii
Gorai.011G221600 Gossypium raimondii
GSVIVG01001426001 Vitis vinifera
GSVIVG01015513001 Vitis vinifera
GSVIVG01015514001 Vitis vinifera
GSVIVG01036594001 Vitis vinifera
HanXRQChr01g0005511 Helianthus annuus
HanXRQChr02g0035841 Helianthus annuus
HanXRQChr05g0140591 Helianthus annuus
HanXRQChr05g0162451 Helianthus annuus
HanXRQChr09g0242321 Helianthus annuus
HanXRQChr10g0278661 Helianthus annuus
Haze_02983 Corylus avellana
Haze_17807 Corylus avellana
Haze_25606 Corylus avellana
Hma1.2p1_0233F.1_g098350 Hydrangea macrophylla
Hma1.2p1_0678F.1_g202050 Hydrangea macrophylla
Hma1.2p1_0678F.1_g202060 Hydrangea macrophylla
Hma1.2p1_1342F.1_g277000 Hydrangea macrophylla
HPP92_011477 Vanilla planifolia
HPP92_016221 Vanilla planifolia
HPP92_016245 Vanilla planifolia
HPP92_020048 Vanilla planifolia
Hund09138 Selenicereus undatus
Hund13400 Selenicereus undatus
Hund17489 Selenicereus undatus
Lalb_Chr02g0141601 Lupinus albus
Lalb_Chr03g0032621 Lupinus albus
Lalb_Chr03g0035641 Lupinus albus
Lalb_Chr06g0161751 Lupinus albus
Lalb_Chr08g0234481 Lupinus albus
Lalb_Chr11g0072051 Lupinus albus
Lalb_Chr15g0079171 Lupinus albus
Lalb_Chr19g0130011 Lupinus albus
Lj1g0004272 Lotus japonicus
Lj2g0000915 Lotus japonicus
Lj3g0008969 Lotus japonicus
Lj4A704T61 Lonicera japonica
Lj5g0013147 Lotus japonicus
Lj7A385T60 Lonicera japonica
Lj7A630G51 Lonicera japonica
Lj8A134G74 Lonicera japonica
LjContig00267g0024726 Lotus japonicus
Lsat_1_v5_gn_1_109880 Lactuca sativa
Lsat_1_v5_gn_2_70740 Lactuca sativa
Lsat_1_v5_gn_6_101381 Lactuca sativa
Lsat_1_v5_gn_7_45660 Lactuca sativa
Lsat_1_v5_gn_8_59061 Lactuca sativa
Manes.02G183800 Manihot esculenta
Manes.06G049400 Manihot esculenta
Manes.11G008100 Manihot esculenta
Mapoly0005s0142 Marchantia polymorpha
Mapoly0033s0126 Marchantia polymorpha
MBI04_g07642_MAGBIO Magnolia biondii
MBI04_g33332_MAGBIO Magnolia biondii
MD00G1152700 Malus domestica
MD02G1034500 Malus domestica
MD05G1034200 Malus domestica
MD07G1043500 Malus domestica
MD10G1036100 Malus domestica
MD15G1175300 Malus domestica
Medtr1g097850 Medicago truncatula
Medtr2g054370 Medicago truncatula
Medtr3g013430 Medicago truncatula
Medtr6g039820 Medicago truncatula
Medtr6g040230 Medicago truncatula
Medtr8g041220 Medicago truncatula
Medtr8g041330 Medicago truncatula
MELO3C012493.2 Cucumis melo
MELO3C024063.2 Cucumis melo
MELO3C024971.2 Cucumis melo
Migut.C00147 Erythranthe guttata
Migut.I00716 Erythranthe guttata
Migut.J01173 Erythranthe guttata
Migut.M01931 Erythranthe guttata
MSTRG.16309 Avicennia marina
MSTRG.19605 Avicennia marina
MSTRG.24934 Avicennia marina
MSTRG.7562 Avicennia marina
Nitab4.5_0000099g0230 Nicotiana tabacum
Nitab4.5_0002551g0010 Nicotiana tabacum
Nitab4.5_0002719g0130 Nicotiana tabacum
Nitab4.5_0003770g0030 Nicotiana tabacum
Nitab4.5_0004077g0010 Nicotiana tabacum
Nitab4.5_0010615g0020 Nicotiana tabacum
Nitab4.5_0013157g0010 Nicotiana tabacum
Nitab4.5_0025584g0010 Nicotiana tabacum
Nn1g05996 Nelumbo nucifera
Nn2g12004 Nelumbo nucifera
Nn7g36945 Nelumbo nucifera
Nn8g39414 Nelumbo nucifera
Oeu046063.1 Olea europaea
Oeu046064.1 Olea europaea
Oeu052708.1 Olea europaea
Oeu061444.1 Olea europaea
Os01g0183000 Oryza sativa ssp. japonica
Os01g0717000 Oryza sativa ssp. japonica
Os05g0535400 Oryza sativa ssp. japonica
Os09g0438400 Oryza sativa ssp. japonica
Peaxi162Scf00360g00615 Petunia axillaris
Peaxi162Scf00641g00008 Petunia axillaris
Peaxi162Scf00641g00009 Petunia axillaris
Peaxi162Scf00670g00345 Petunia axillaris
PGR031G2576 Punica granatum
PGR102G1156 Punica granatum
PGR142G2283 Punica granatum
PGSC0003DMG400019035 Solanum tuberosum
PGSC0003DMG400021130 Solanum tuberosum
PGSC0003DMG400025081 Solanum tuberosum
PGSC0003DMG400025638 Solanum tuberosum
PGSC0003DMG401009603 Solanum tuberosum
PGSC0003DMG402009603 Solanum tuberosum
Phvul.004G089000 Phaseolus vulgaris
Phvul.005G017000 Phaseolus vulgaris
Phvul.007G083800 Phaseolus vulgaris
Phvul.009G197300 Phaseolus vulgaris
Phvul.011G197100 Phaseolus vulgaris
Potri.001G032000 Populus trichocarpa
Potri.002G063700 Populus trichocarpa
Potri.003G193000 Populus trichocarpa
Potri.005G197500 Populus trichocarpa
Potri.006G120700 Populus trichocarpa
Pp3c16_7450 Physcomitrium patens
Pp3c23_13990 Physcomitrium patens
Pp3c24_1830 Physcomitrium patens
Pp3c25_8670 Physcomitrium patens
PRCOL_00004681 Prasinoderma coloniale
Prupe.2G044500 Prunus persica
Prupe.7G240800 Prunus persica
Prupe.8G041800 Prunus persica
Psat0s1172g0280 Pisum sativum
Psat1g025840 Pisum sativum
Psat4g144040 Pisum sativum
Psat5g223320 Pisum sativum
Psat6g190600 Pisum sativum
PSO170G5818 Papaver somniferum
PSO170G6854 Papaver somniferum
PSO210G7009 Papaver somniferum
PSO266G0088 Papaver somniferum
PSO455G0151 Papaver somniferum
PSO541G2039 Papaver somniferum
PSO675G8209 Papaver somniferum
QL02p037267 Quercus lobata
QL02p037313 Quercus lobata
QL02p087951 Quercus lobata
QL04p021516 Quercus lobata
RcHm_v2.0_Chr1g0327661 Rosa chinensis
RcHm_v2.0_Chr1g0347241 Rosa chinensis
RcHm_v2.0_Chr2g0088751 Rosa chinensis
RcHm_v2.0_Chr2g0088811 Rosa chinensis
RcHm_v2.0_Chr2g0088821 Rosa chinensis
RcHm_v2.0_Chr2g0088981 Rosa chinensis
RcHm_v2.0_Chr2g0089031 Rosa chinensis
RcHm_v2.0_Chr2g0110271 Rosa chinensis
RcHm_v2.0_Chr4g0418131 Rosa chinensis
RcHm_v2.0_Chr6g0274111 Rosa chinensis
Rhsim01G0074600 Rhododendron simsii
Rhsim03G0247500 Rhododendron simsii
Rhsim07G0071200 Rhododendron simsii
Rhsim11G0088200 Rhododendron simsii
Sabra02G0051100 Salix brachista
Sabra03G0143800 Salix brachista
Sabra05G0150300 Salix brachista
Sabra06G0094800 Salix brachista
Sabra06G0094900 Salix brachista
SalBow5G4768 Salvia bowleyana
SalBow7G1807 Salvia bowleyana
SalBow8G2234 Salvia bowleyana
SalBow8G3703 Salvia bowleyana
Sc02g0004280 Simmondsia chinensis
Sc08g0006700 Simmondsia chinensis
Sc10g0003200 Simmondsia chinensis
Sed0000453 Sechium edule
Sed0002929 Sechium edule
Sed0020658 Sechium edule
Sed0027908 Sechium edule
SEGI_07481 Sequoiadendron giganteum
SEGI_11853 Sequoiadendron giganteum
SEGI_33688 Sequoiadendron giganteum
SEGI_37509 Sequoiadendron giganteum
SGA_v2.0_scaffold133G34674 Striga asiatica
SGA_v2.0_scaffold1G00297 Striga asiatica
SGA_v2.0_scaffold229G43327 Striga asiatica
SHI18655 Sapria himalayana
SMO140G0052 Selaginella moellendorffii
SMO147G0098 Selaginella moellendorffii
SMO147G0105 Selaginella moellendorffii
SMO330G0022 Selaginella moellendorffii
SMO358G0053 Selaginella moellendorffii
Solyc02g069750.3 Solanum lycopersicum
Solyc04g072020.3 Solanum lycopersicum
Solyc08g066820.3 Solanum lycopersicum
Sopen02g018870 Solanum pennellii
Sopen04g028000 Solanum pennellii
Sopen08g020780 Solanum pennellii
Sp1g29350 Schrenkiella parvula
Sp4g08910 Schrenkiella parvula
Sp5g26730 Schrenkiella parvula
Sp5g29480 Schrenkiella parvula
Sp6g07740 Schrenkiella parvula
TAR090G0001 Trochodendron aralioides
TAR381G0305 Trochodendron aralioides
TAR623G0322 Trochodendron aralioides
TAR626G1113 Trochodendron aralioides
THA.LOC104799333 Tarenaya hassleriana
THA.LOC104800092 Tarenaya hassleriana
THA.LOC104808999 Tarenaya hassleriana
THA.LOC104809913 Tarenaya hassleriana
THA.LOC104815261 Tarenaya hassleriana
THA.LOC104816071 Tarenaya hassleriana
Thecc.08G160300 Theobroma cacao
Thecc.09G124100 Theobroma cacao
Thecc.10G140500 Theobroma cacao
Thhalv10002015m.g Eutrema salsugineum
Thhalv10008064m.g Eutrema salsugineum
Thhalv10018799m.g Eutrema salsugineum
Thhalv10018814m.g Eutrema salsugineum
Thhalv10019586m.g Eutrema salsugineum
Thhalv10029409m.g Eutrema salsugineum
TPR.G1434 Trifolium pratense
TPR.G16385 Trifolium pratense
TPR.G17046 Trifolium pratense
TPR.G18590 Trifolium pratense
TPR.G19705 Trifolium pratense
TPR.G31097 Trifolium pratense
TPR.G33130 Trifolium pratense
TPR.G39796 Trifolium pratense
TPR.G7057 Trifolium pratense
TWI32G0662 Tripterygium wilfordii
TWI34G0079 Tripterygium wilfordii
TWI34G1767 Tripterygium wilfordii
TWI38G2099 Tripterygium wilfordii
TWI60G0781 Tripterygium wilfordii
unitig_46.g18722 Utricularia gibba
unitig_46.g18723 Utricularia gibba
unitig_747.g21802 Utricularia gibba
unitig_748.g7350 Utricularia gibba
unitig_82.g27139 Utricularia gibba
vmacro01499 Vaccinium macrocarpon
vmacro06123 Vaccinium macrocarpon
vmacro13774 Vaccinium macrocarpon
vmacro16513 Vaccinium macrocarpon
vmacro20540 Vaccinium macrocarpon
vmacro20541 Vaccinium macrocarpon
VMungo0464G0161 Vigna mungo
VMungo0720G2322 Vigna mungo
VMungo1080G0614 Vigna mungo
VMungo1127G0317 Vigna mungo
VMungo1215G1691 Vigna mungo
VMungo1309G1396 Vigna mungo
Zm00001eb027420 Zea mays
Zm00001eb100060 Zea mays
Zm00001eb154820 Zea mays
Zm00001eb207730 Zea mays
Zm00001eb293970 Zea mays
Zm00001eb313980 Zea mays
Zm00001eb337610 Zea mays

User provided reference genes

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