Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05490 Brassica napus
A04p00270 Brassica napus
A05p42020 Brassica napus
A08p05940 Brassica napus
A09p54950 Brassica napus
A09p63030 Brassica napus
A09p63070 Brassica napus
A10p06640 Brassica napus
A10p20360 Brassica napus
Aa31LG10G16970 Aethionema arabicum
Aa31LG11G10350 Aethionema arabicum
Aa31LG5G18920 Aethionema arabicum
Aa31LG5G19390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2163 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.564 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.705 Anthoceros agrestis
Actinidia08267 Actinidia chinensis
Actinidia21114 Actinidia chinensis
Actinidia22665 Actinidia chinensis
Actinidia23491 Actinidia chinensis
Actinidia24891 Actinidia chinensis
Actinidia33349 Actinidia chinensis
Actinidia36982 Actinidia chinensis
Actinidia38087 Actinidia chinensis
Ah.01g009800 Amaranthus hybridus
Ah.05g167240 Amaranthus hybridus
Ah.05g178080 Amaranthus hybridus
Ah.14g080200 Amaranthus hybridus
AL1G53320 Arabidopsis lyrata
AL3G16820 Arabidopsis lyrata
AL3G47660 Arabidopsis lyrata
AL47U10010 Arabidopsis lyrata
AL4G15940 Arabidopsis lyrata
AL5G45970 Arabidopsis lyrata
AL6G30810 Arabidopsis lyrata
AL6G40070 Arabidopsis lyrata
AL8G17650 Arabidopsis lyrata
Aqoxy230s003 Aquilegia oxysepala
Aqoxy2G03334 Aquilegia oxysepala
Aqoxy4G03212 Aquilegia oxysepala
Aqoxy5G01135 Aquilegia oxysepala
Aqoxy6G02840 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5GQC5T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9IS8RL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W732RU Arachis hypogaea
AT1G47200 Arabidopsis thaliana
AT3G06000 Arabidopsis thaliana
AT3G63130 Arabidopsis thaliana
AT5G19320 Arabidopsis thaliana
AT5G27940 Arabidopsis thaliana
AT5G43070 Arabidopsis thaliana
ATR0205G017 Amborella trichopoda
ATR0661G399 Amborella trichopoda
Atru.chr13.770 Acer truncatum
Atru.chr4.2519 Acer truncatum
Atru.chr5.1438 Acer truncatum
AUR62023568 Chenopodium quinoa
AUR62044370 Chenopodium quinoa
AUR62044632 Chenopodium quinoa
BcaB04g17546 Brassica carinata
BcaB07g33854 Brassica carinata
BcaB08g36583 Brassica carinata
BcaC03g13664 Brassica carinata
BcaC04g18578 Brassica carinata
BcaC05g30070 Brassica carinata
BcaC07g37236 Brassica carinata
BcaC07g40793 Brassica carinata
BcaC07g41648 Brassica carinata
BcaC08g42930 Brassica carinata
BcaC09g47871 Brassica carinata
BcaNung06069 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02610 Brassica napus
BNapus_Darmor_BZH_scaffold_38p02620 Brassica napus
BolC1t05643H Brassica oleracea
BolC4t24541H Brassica oleracea
BolC5t34785H Brassica oleracea
BolC6t35298H Brassica oleracea
BolC8t47503H Brassica oleracea
BolC8t51364H Brassica oleracea
BraA02t05500Z Brassica rapa
BraA04t15746Z Brassica rapa
BraA05t22923Z Brassica rapa
BraA08t32595Z Brassica rapa
BraA09t40904Z Brassica rapa
BraA09t41660Z Brassica rapa
BraA10t42922Z Brassica rapa
C04p30090 Brassica napus
C05p61260 Brassica napus
C06p01670 Brassica napus
C08p06600 Brassica napus
C08p37860 Brassica napus
C08p46490 Brassica napus
CAN.G107.48 Capsicum annuum
CAN.G1621.9 Capsicum annuum
CAN.G165.25 Capsicum annuum
CAN.G232.5 Capsicum annuum
CAN.G69.8 Capsicum annuum
CANSAT01G2404 Cannabis sativa
CANSAT25G0731 Cannabis sativa
CANSAT25G2642 Cannabis sativa
CANSAT64G2190 Cannabis sativa
CANSAT78G1871 Cannabis sativa
CARHR036740 Cardamine hirsuta
CARHR173450 Cardamine hirsuta
CARHR180920 Cardamine hirsuta
CARHR193640 Cardamine hirsuta
Carub.0001s3596 Capsella rubella
Carub.0003s0542 Capsella rubella
Carub.0005s2980 Capsella rubella
Carub.0006s1766 Capsella rubella
Carub.0008s0565 Capsella rubella
Ca_09756_v3 Cicer arietinum L.
Ca_10931_v3 Cicer arietinum L.
Ca_11981_v3 Cicer arietinum L.
Ca_13253_v3 Cicer arietinum L.
Ca_15925_v3 Cicer arietinum L.
Cc01_g19460 Coffea canephora
Cc03_g03410 Coffea canephora
Cc10_g05200 Coffea canephora
CDE04G2550 Ceratophyllum demersum
CDE05G2403 Ceratophyllum demersum
CDE05G2955 Ceratophyllum demersum
CDE07G0413 Ceratophyllum demersum
Cfa006141 Carpinus fangiana
Cfa015610 Carpinus fangiana
Cfa018037 Carpinus fangiana
Ciclev10002480m.g Citrus clementina
Ciclev10004648m.g Citrus clementina
Ciclev10019619m.g Citrus clementina
CiPaw.01G162900 Carya illinoinensis
CiPaw.07G091800 Carya illinoinensis
CiPaw.15G049900 Carya illinoinensis
CiPaw.16G035200 Carya illinoinensis
ClCG05G005290 Citrullus lanatus
ClCG05G020300 Citrullus lanatus
ClCG08G016240 Citrullus lanatus
ClCG09G007560 Citrullus lanatus
COL.COLO4_06202 Corchorus olitorius
COL.COLO4_09095 Corchorus olitorius
COL.COLO4_28576 Corchorus olitorius
Cpa.g.sc1278.2 Carica papaya
Cpa.g.sc21.138 Carica papaya
Cpa.g.sc370.5 Carica papaya
Cre02.g103800 Chlamydomonas reinhardtii
Cre11.g479250 Chlamydomonas reinhardtii
CsaV3_2G026380 Cucumis sativus L.
CsaV3_3G013520 Cucumis sativus L.
CsaV3_4G034780 Cucumis sativus L.
CsaV3_7G027560 Cucumis sativus L.
CSS0002061 Camellia sinensis var. sinensis
CSS0008374 Camellia sinensis var. sinensis
CSS0018538 Camellia sinensis var. sinensis
CSS0041343 Camellia sinensis var. sinensis
CSS0046163 Camellia sinensis var. sinensis
DCAR_002733 Daucus carota
DCAR_008838 Daucus carota
DCAR_012475 Daucus carota
DCAR_012800 Daucus carota
DCAR_031353 Daucus carota
Dinv32934 Davidia involucrata
Dinv34753 Davidia involucrata
Dinv39258 Davidia involucrata
Dinv44506 Davidia involucrata
Duzib041G0056 Durio zibethinus
Duzib093G0342 Durio zibethinus
Duzib133G0175 Durio zibethinus
Duzib138G0786 Durio zibethinus
Duzib151G0592 Durio zibethinus
Duzib212G0180 Durio zibethinus
ECA246G0756 Erigeron canadensis
ECA246G1900 Erigeron canadensis
ECA247G1743 Erigeron canadensis
ECA247G2530 Erigeron canadensis
ECA248G0164 Erigeron canadensis
EL10Ac1g00079 Beta vulgaris
EL10Ac2g03052 Beta vulgaris
EL10Ac6g13822 Beta vulgaris
EL10Ac8g20247 Beta vulgaris
EL10As7g23801 Beta vulgaris
Eucgr.F00159 Eucalyptus grandis
Eucgr.H01478 Eucalyptus grandis
Eucgr.H02599 Eucalyptus grandis
Eucgr.H03559 Eucalyptus grandis
FAN12G0995 Fragaria x ananassa
FAN15G1104 Fragaria x ananassa
FAN15G1939 Fragaria x ananassa
FAN20G0388 Fragaria x ananassa
FAN20G0907 Fragaria x ananassa
FAN20G2280 Fragaria x ananassa
FAN22G2231 Fragaria x ananassa
FAN24G0915 Fragaria x ananassa
FAN24G1427 Fragaria x ananassa
FAN27G3005 Fragaria x ananassa
FAN27G3472 Fragaria x ananassa
FvH4_2g23560 Fragaria vesca
FvH4_2g33670 Fragaria vesca
FvH4_3g38474 Fragaria vesca
FvH4_4g14980 Fragaria vesca
Glyma.02G147200 Glycine max
Glyma.04G043200 Glycine max
Glyma.06G043700 Glycine max
Glyma.10G026700 Glycine max
Glyma.10G250400 Glycine max
Glyma.14G086900 Glycine max
Glyma.17G237500 Glycine max
Glyma.20G143300 Glycine max
Gohir.A01G121500 Gossypium hirsutum
Gohir.A05G206500 Gossypium hirsutum
Gohir.A08G045130 Gossypium hirsutum
Gohir.A08G067050 Gossypium hirsutum
Gohir.A10G117900 Gossypium hirsutum
Gohir.D01G109000 Gossypium hirsutum
Gohir.D05G210000 Gossypium hirsutum
Gohir.D05G264900 Gossypium hirsutum
Gohir.D08G055000 Gossypium hirsutum
Gohir.D08G075600 Gossypium hirsutum
Gohir.D10G148900 Gossypium hirsutum
Gorai.002G133200 Gossypium raimondii
Gorai.004G055500 Gossypium raimondii
Gorai.004G079900 Gossypium raimondii
Gorai.009G216400 Gossypium raimondii
Gorai.009G276700 Gossypium raimondii
Gorai.011G166200 Gossypium raimondii
GSVIVG01011081001 Vitis vinifera
GSVIVG01014452001 Vitis vinifera
GSVIVG01017922001 Vitis vinifera
HanXRQChr01g0003131 Helianthus annuus
HanXRQChr01g0030201 Helianthus annuus
HanXRQChr01g0030211 Helianthus annuus
HanXRQChr01g0030261 Helianthus annuus
HanXRQChr01g0030271 Helianthus annuus
HanXRQChr04g0118261 Helianthus annuus
HanXRQChr05g0150481 Helianthus annuus
HanXRQChr11g0336161 Helianthus annuus
Haze_00932 Corylus avellana
Haze_04709 Corylus avellana
Haze_18087 Corylus avellana
Hma1.2p1_0511F.1_g168940 Hydrangea macrophylla
Hma1.2p1_0634F.1_g192950 Hydrangea macrophylla
HPP92_004637 Vanilla planifolia
HPP92_007849 Vanilla planifolia
HPP92_020627 Vanilla planifolia
HPP92_021899 Vanilla planifolia
HPP92_023698 Vanilla planifolia
Hund26907 Selenicereus undatus
Lalb_Chr02g0144681 Lupinus albus
Lalb_Chr06g0163001 Lupinus albus
Lalb_Chr06g0164771 Lupinus albus
Lalb_Chr14g0368421 Lupinus albus
Lalb_Chr21g0306461 Lupinus albus
Lalb_Chr22g0354841 Lupinus albus
Lalb_Chr23g0267351 Lupinus albus
Lj1C46G17 Lonicera japonica
Lj1g0010090 Lotus japonicus
Lj3P740T27 Lonicera japonica
Lj3P740T38 Lonicera japonica
Lj4P764T7 Lonicera japonica
Lj5g0001031 Lotus japonicus
Lj5g0010430 Lotus japonicus
Lj5g0018736 Lotus japonicus
Lj6P597T53 Lonicera japonica
Lsat_1_v5_gn_1_23021 Lactuca sativa
Lsat_1_v5_gn_5_188240 Lactuca sativa
Lsat_1_v5_gn_6_109441 Lactuca sativa
Lsat_1_v5_gn_9_3680 Lactuca sativa
Lsat_1_v5_gn_9_46601 Lactuca sativa
Manes.01G207600 Manihot esculenta
Manes.03G181500 Manihot esculenta
Manes.05G076600 Manihot esculenta
Manes.12G114500 Manihot esculenta
Manes.15G026100 Manihot esculenta
Manes.18G042600 Manihot esculenta
Mapoly0111s0020 Marchantia polymorpha
MBI16_g04493_MAGBIO Magnolia biondii
MCO05G482 Micromonas commoda
MD08G1091600 Malus domestica
MD10G1055400 Malus domestica
MD13G1187000 Malus domestica
MD15G1075600 Malus domestica
MD16G1187900 Malus domestica
Medtr1g018710 Medicago truncatula
Medtr1g072250 Medicago truncatula
Medtr1g105040 Medicago truncatula
Medtr3g102500 Medicago truncatula
MELO3C006548.2 Cucumis melo
MELO3C010830.2 Cucumis melo
MELO3C015767.2 Cucumis melo
MELO3C016792.2 Cucumis melo
Migut.D00297 Erythranthe guttata
Migut.G00314 Erythranthe guttata
Migut.N02754 Erythranthe guttata
Migut.O00599 Erythranthe guttata
MSTRG.10000 Avicennia marina
MSTRG.18234 Avicennia marina
MSTRG.22238 Avicennia marina
MSTRG.25063 Avicennia marina
MSTRG.4012 Avicennia marina
Nitab4.5_0000144g0110 Nicotiana tabacum
Nitab4.5_0000180g0050 Nicotiana tabacum
Nitab4.5_0000458g0030 Nicotiana tabacum
Nitab4.5_0000569g0170 Nicotiana tabacum
Nitab4.5_0001966g0060 Nicotiana tabacum
Nitab4.5_0003035g0010 Nicotiana tabacum
Nitab4.5_0004888g0020 Nicotiana tabacum
Nitab4.5_0008435g0020 Nicotiana tabacum
Nitab4.5_0011741g0010 Nicotiana tabacum
Nn1g02230 Nelumbo nucifera
Nn1g04667 Nelumbo nucifera
Nn1g06775 Nelumbo nucifera
Nn2g14507 Nelumbo nucifera
Nn3g19529 Nelumbo nucifera
Nn4g26251 Nelumbo nucifera
Nn5g30440 Nelumbo nucifera
Oeu016580.1 Olea europaea
Oeu018050.1 Olea europaea
Oeu020816.2 Olea europaea
Oeu028069.1 Olea europaea
Oeu036969.1 Olea europaea
Os03g0209000 Oryza sativa ssp. japonica
Os05g0409200 Oryza sativa ssp. japonica
Os05g0543200 Oryza sativa ssp. japonica
Os07g0593332 Oryza sativa ssp. japonica
Os10g0337700 Oryza sativa ssp. japonica
Peaxi162Scf00219g00123 Petunia axillaris
Peaxi162Scf00437g00611 Petunia axillaris
Peaxi162Scf01607g00114 Petunia axillaris
PGR004G0209 Punica granatum
PGR031G2476 Punica granatum
PGR119G0688 Punica granatum
PGSC0003DMG400003309 Solanum tuberosum
PGSC0003DMG400009029 Solanum tuberosum
PGSC0003DMG400035893 Solanum tuberosum
Phvul.001G025400 Phaseolus vulgaris
Phvul.007G054100 Phaseolus vulgaris
Phvul.007G172200 Phaseolus vulgaris
Phvul.009G068700 Phaseolus vulgaris
Potri.002G052900 Populus trichocarpa
Potri.002G122000 Populus trichocarpa
Potri.005G209600 Populus trichocarpa
Potri.010G091100 Populus trichocarpa
Potri.014G021900 Populus trichocarpa
Pp3c11_16930 Physcomitrium patens
Pp3c7_9140 Physcomitrium patens
PRCOL_00000098 Prasinoderma coloniale
Prupe.1G154700 Prunus persica
Prupe.1G429000 Prunus persica
Prupe.8G240900 Prunus persica
Psat0s3164g0120 Pisum sativum
Psat6g014240 Pisum sativum
Psat6g060120 Pisum sativum
Psat6g209800 Pisum sativum
PSO423G0289 Papaver somniferum
PSO541G2388 Papaver somniferum
PSO541G6504 Papaver somniferum
PSO675G1014 Papaver somniferum
PSO675G3068 Papaver somniferum
PSO832G2839 Papaver somniferum
QL02p003371 Quercus lobata
QL06p003512 Quercus lobata
QL06p040004 Quercus lobata
QL12p021879 Quercus lobata
RcHm_v2.0_Chr4g0416981 Rosa chinensis
RcHm_v2.0_Chr6g0291031 Rosa chinensis
RcHm_v2.0_Chr6g0308881 Rosa chinensis
Rhsim02G0022400 Rhododendron simsii
Rhsim06G0057100 Rhododendron simsii
Rhsim13G0024900 Rhododendron simsii
Sabra02G0043000 Salix brachista
Sabra02G0095900 Salix brachista
Sabra05G0159700 Salix brachista
Sabra08G0114100 Salix brachista
Sabra10G0052100 Salix brachista
Sabra14G0014500 Salix brachista
SalBow2G1111 Salvia bowleyana
SalBow4G2940 Salvia bowleyana
SalBow6G1031 Salvia bowleyana
Sc13g0004180 Simmondsia chinensis
Sc15g0005510 Simmondsia chinensis
Sc15g0005810 Simmondsia chinensis
Sc19g0004340 Simmondsia chinensis
Sed0004426 Sechium edule
Sed0012650 Sechium edule
Sed0014120 Sechium edule
Sed0018271 Sechium edule
Sed0023105 Sechium edule
Sed0026094 Sechium edule
Sed0026283 Sechium edule
SEGI_00692 Sequoiadendron giganteum
SEGI_02822 Sequoiadendron giganteum
SEGI_04304 Sequoiadendron giganteum
SEGI_05229 Sequoiadendron giganteum
SEGI_07803 Sequoiadendron giganteum
SEGI_10126 Sequoiadendron giganteum
SEGI_15720 Sequoiadendron giganteum
SEGI_16178 Sequoiadendron giganteum
SEGI_18981 Sequoiadendron giganteum
SEGI_33127 Sequoiadendron giganteum
SEGI_37088 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06954 Striga asiatica
SGA_v2.0_scaffold1G00474 Striga asiatica
SGA_v2.0_scaffold237G43794 Striga asiatica
SGA_v2.0_scaffold28G11812 Striga asiatica
SHI00412 Sapria himalayana
SHI08357 Sapria himalayana
SMO141G0239 Selaginella moellendorffii
SMO196G0128 Selaginella moellendorffii
Solyc01g079680.3 Solanum lycopersicum
Solyc04g078380.3 Solanum lycopersicum
Solyc09g065190.3 Solanum lycopersicum
Sopen01g031460 Solanum pennellii
Sopen04g031970 Solanum pennellii
Sopen09g026900 Solanum pennellii
Sp1g34320 Schrenkiella parvula
Sp2g07850 Schrenkiella parvula
Sp3g04940 Schrenkiella parvula
Sp5g00400 Schrenkiella parvula
Sp6g25090 Schrenkiella parvula
TAR362G0568 Trochodendron aralioides
TAR365G0153 Trochodendron aralioides
TAR381G1295 Trochodendron aralioides
TAR625G0613 Trochodendron aralioides
TAR633G1687 Trochodendron aralioides
THA.LOC104814178 Tarenaya hassleriana
THA.LOC104818782 Tarenaya hassleriana
THA.LOC104820501 Tarenaya hassleriana
THA.LOC104823049 Tarenaya hassleriana
Thecc.01G279200 Theobroma cacao
Thecc.04G226700 Theobroma cacao
Thecc.08G095300 Theobroma cacao
Thhalv10003281m.g Eutrema salsugineum
Thhalv10005880m.g Eutrema salsugineum
Thhalv10011812m.g Eutrema salsugineum
Thhalv10013175m.g Eutrema salsugineum
TPR.G25586 Trifolium pratense
TPR.G5456 Trifolium pratense
TPR.G9119 Trifolium pratense
TWI09G1274 Tripterygium wilfordii
TWI09G1366 Tripterygium wilfordii
TWI14G0154 Tripterygium wilfordii
TWI14G0956 Tripterygium wilfordii
TWI36G1533 Tripterygium wilfordii
TWI53G0337 Tripterygium wilfordii
TWI59G0477 Tripterygium wilfordii
TWI73G1198 Tripterygium wilfordii
unitig_26.g9808 Utricularia gibba
unitig_32.g11732 Utricularia gibba
unitig_578.g16543 Utricularia gibba
unitig_748.g8552 Utricularia gibba
unitig_8.g3368 Utricularia gibba
unitig_8.g5036 Utricularia gibba
vmacro02571 Vaccinium macrocarpon
vmacro15324 Vaccinium macrocarpon
vmacro23170 Vaccinium macrocarpon
vmacro23334 Vaccinium macrocarpon
VMungo0647G1866 Vigna mungo
VMungo0720G0002 Vigna mungo
VMungo0720G0975 Vigna mungo
VMungo1309G2681 Vigna mungo
Zm00001eb007170 Zea mays
Zm00001eb063050 Zea mays
Zm00001eb084790 Zea mays
Zm00001eb108360 Zea mays
Zm00001eb184850 Zea mays
Zm00001eb215760 Zea mays
Zm00001eb243250 Zea mays
Zm00001eb244490 Zea mays
Zm00001eb247310 Zea mays
Zm00001eb308230 Zea mays
Zm00001eb314640 Zea mays
Zm00001eb326490 Zea mays
Zm00001eb339210 Zea mays
Zm00001eb383100 Zea mays
Zm00001eb400520 Zea mays

User provided reference genes

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