Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41960 Brassica napus
A05p01350 Brassica napus
A05p38860 Brassica napus
A07p25680 Brassica napus
A09p53790 Brassica napus
Aa31LG10G15700 Aethionema arabicum
Aa31LG1G21230 Aethionema arabicum
Aa31LG1G27760 Aethionema arabicum
Aa31LG3G2810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.899 Anthoceros agrestis
Actinidia09271 Actinidia chinensis
Actinidia17689 Actinidia chinensis
Actinidia28122 Actinidia chinensis
Actinidia28503 Actinidia chinensis
Actinidia32315 Actinidia chinensis
Actinidia38153 Actinidia chinensis
Ah.05g179700 Amaranthus hybridus
Ah.13g076940 Amaranthus hybridus
AL3G21580 Arabidopsis lyrata
AL4G45720 Arabidopsis lyrata
AL5G44210 Arabidopsis lyrata
AL6G13720 Arabidopsis lyrata
Aqoxy1G00355 Aquilegia oxysepala
Aqoxy2G00354 Aquilegia oxysepala
Aqoxy5G04208 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1EFM0N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67YT7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6VNQ6H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7L4C7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8618U7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AUD0V9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BNGT2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QCV352 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z287JL Arachis hypogaea
AT2G46420 Arabidopsis thaliana
AT3G10250 Arabidopsis thaliana
AT3G61700 Arabidopsis thaliana
AT5G04090 Arabidopsis thaliana
ATR0188G015 Amborella trichopoda
ATR0745G078 Amborella trichopoda
Atru.chr1.1492 Acer truncatum
Atru.chr1.233 Acer truncatum
Atru.chr5.656 Acer truncatum
AUR62004477 Chenopodium quinoa
AUR62006137 Chenopodium quinoa
AUR62019352 Chenopodium quinoa
AUR62030341 Chenopodium quinoa
AUR62040829 Chenopodium quinoa
BcaB04g21220 Brassica carinata
BcaC02g12531 Brassica carinata
BcaC07g42606 Brassica carinata
BcaC08g45151 Brassica carinata
BcaC09g48105 Brassica carinata
BcaNung05527 Brassica carinata
BcaNung05605 Brassica carinata
BolC1t05411H Brassica oleracea
BolC1t05412H Brassica oleracea
BolC4t21804H Brassica oleracea
BolC5t34445H Brassica oleracea
BolC6t37940H Brassica oleracea
BolC8t51243H Brassica oleracea
BraA01t04263Z Brassica rapa
BraA05t19133Z Brassica rapa
BraA05t22678Z Brassica rapa
BraA07t30208Z Brassica rapa
C04p01530 Brassica napus
C05p57900 Brassica napus
C06p27690 Brassica napus
C08p36600 Brassica napus
CAN.G10788.1 Capsicum annuum
CAN.G1207.5 Capsicum annuum
CAN.G1563.2 Capsicum annuum
CAN.G1563.8 Capsicum annuum
CAN.G1579.9 Capsicum annuum
CAN.G1703.2 Capsicum annuum
CAN.G1783.1 Capsicum annuum
CAN.G1834.2 Capsicum annuum
CAN.G2141.1 Capsicum annuum
CAN.G2177.1 Capsicum annuum
CAN.G2289.3 Capsicum annuum
CAN.G231.8 Capsicum annuum
CAN.G2376.1 Capsicum annuum
CAN.G38.30 Capsicum annuum
CAN.G551.3 Capsicum annuum
CAN.G6136.1 Capsicum annuum
CAN.G641.51 Capsicum annuum
CAN.G641.72 Capsicum annuum
CAN.G6546.1 Capsicum annuum
CAN.G743.2 Capsicum annuum
CANSAT56G2581 Cannabis sativa
CANSAT64G1516 Cannabis sativa
CARHR084730 Cardamine hirsuta
CARHR141700 Cardamine hirsuta
CARHR172010 Cardamine hirsuta
CARHR209170 Cardamine hirsuta
Carub.0003s0942 Capsella rubella
Carub.0004s2912 Capsella rubella
Carub.0005s2845 Capsella rubella
Carub.0006s0305 Capsella rubella
Ca_13045_v3 Cicer arietinum L.
Ca_23541_v3 Cicer arietinum L.
Ca_29804_v3 Cicer arietinum L.
CBR_g52240 Chara braunii
CBR_g53663 Chara braunii
Cc01_g00850 Coffea canephora
Cc06_g18910 Coffea canephora
Cc11_g03600 Coffea canephora
CDE03G0264 Ceratophyllum demersum
CDE04G1178 Ceratophyllum demersum
CDE07G1731 Ceratophyllum demersum
CDE10G0555 Ceratophyllum demersum
CDE10G0647 Ceratophyllum demersum
Cfa020022 Carpinus fangiana
Ciclev10020704m.g Citrus clementina
Ciclev10021153m.g Citrus clementina
CiPaw.01G074900 Carya illinoinensis
CiPaw.02G040000 Carya illinoinensis
CiPaw.06G008300 Carya illinoinensis
CiPaw.09G046200 Carya illinoinensis
ClCG04G004280 Citrullus lanatus
ClCG04G004300 Citrullus lanatus
ClCG05G000890 Citrullus lanatus
ClCG06G002210 Citrullus lanatus
ClCG10G016080 Citrullus lanatus
COL.COLO4_05694 Corchorus olitorius
COL.COLO4_06296 Corchorus olitorius
Cpa.g.sc405.3 Carica papaya
Cpa.g.sc5.211 Carica papaya
Cre09.g397150 Chlamydomonas reinhardtii
CsaV3_3G008120 Cucumis sativus L.
CsaV3_3G040350 Cucumis sativus L.
CsaV3_4G027800 Cucumis sativus L.
CsaV3_6G008290 Cucumis sativus L.
CSS0025773 Camellia sinensis var. sinensis
CSS0039754 Camellia sinensis var. sinensis
CSS0040626 Camellia sinensis var. sinensis
DCAR_006971 Daucus carota
DCAR_008662 Daucus carota
DCAR_020552 Daucus carota
Dinv08513 Davidia involucrata
Dinv18740 Davidia involucrata
Dinv30169 Davidia involucrata
Dinv32575 Davidia involucrata
Dinv34376 Davidia involucrata
Duzib093G0720 Durio zibethinus
Duzib106G0060 Durio zibethinus
Duzib128G1139 Durio zibethinus
Duzib133G0755 Durio zibethinus
Duzib138G0066 Durio zibethinus
ECA233G3037 Erigeron canadensis
ECA238G0113 Erigeron canadensis
ECA246G1590 Erigeron canadensis
ECA248G0665 Erigeron canadensis
EL10Ac1g00287 Beta vulgaris
EL10Ac3g05332 Beta vulgaris
EL10Ac3g07202 Beta vulgaris
Eucgr.A02260 Eucalyptus grandis
Eucgr.D02368 Eucalyptus grandis
FAN01G1017 Fragaria x ananassa
FAN01G1354 Fragaria x ananassa
FAN01G1828 Fragaria x ananassa
FAN01G3170 Fragaria x ananassa
FAN02G2982 Fragaria x ananassa
FAN03G0090 Fragaria x ananassa
FAN03G1438 Fragaria x ananassa
FAN04G1166 Fragaria x ananassa
FAN05G0449 Fragaria x ananassa
FAN06G0745 Fragaria x ananassa
FAN06G1952 Fragaria x ananassa
FAN06G3084 Fragaria x ananassa
FAN06G4906 Fragaria x ananassa
FAN09G0850 Fragaria x ananassa
FAN10G1039 Fragaria x ananassa
FAN10G1440 Fragaria x ananassa
FAN10G2334 Fragaria x ananassa
FAN10G4115 Fragaria x ananassa
FAN25G1950 Fragaria x ananassa
FvH4_6g25280 Fragaria vesca
FvH4_7g16290 Fragaria vesca
FvH4_7g31180 Fragaria vesca
Glyma.03G129900 Glycine max
Glyma.07G056500 Glycine max
Glyma.13G082400 Glycine max
Glyma.16G025500 Glycine max
Glyma.19G132200 Glycine max
Glyma.19G255200 Glycine max
Gohir.A02G112715 Gossypium hirsutum
Gohir.A08G034100 Gossypium hirsutum
Gohir.A08G125700 Gossypium hirsutum
Gohir.A11G096700 Gossypium hirsutum
Gohir.A11G308000 Gossypium hirsutum
Gohir.A12G111800 Gossypium hirsutum
Gohir.D03G071100 Gossypium hirsutum
Gohir.D08G044600 Gossypium hirsutum
Gohir.D08G146600 Gossypium hirsutum
Gohir.D11G101400 Gossypium hirsutum
Gohir.D11G323400 Gossypium hirsutum
Gohir.D12G115100 Gossypium hirsutum
Gorai.003G088900 Gossypium raimondii
Gorai.004G043600 Gossypium raimondii
Gorai.004G152200 Gossypium raimondii
Gorai.007G108000 Gossypium raimondii
Gorai.007G353400 Gossypium raimondii
Gorai.008G124700 Gossypium raimondii
GSVIVG01010607001 Vitis vinifera
GSVIVG01027086001 Vitis vinifera
GSVIVG01028709001 Vitis vinifera
GSVIVG01033609001 Vitis vinifera
HanXRQChr02g0057311 Helianthus annuus
HanXRQChr05g0159941 Helianthus annuus
HanXRQChr11g0334041 Helianthus annuus
HanXRQChr13g0392951 Helianthus annuus
HanXRQChr13g0405811 Helianthus annuus
HanXRQChr14g0437631 Helianthus annuus
Haze_00125 Corylus avellana
Haze_15644 Corylus avellana
Haze_20195 Corylus avellana
Hma1.2p1_1407F.1_g281430 Hydrangea macrophylla
HPP92_015912 Vanilla planifolia
HPP92_015943 Vanilla planifolia
HPP92_020020 Vanilla planifolia
Hund16705 Selenicereus undatus
Hund19106 Selenicereus undatus
Hund24626 Selenicereus undatus
Hund27205 Selenicereus undatus
Lalb_Chr01g0017181 Lupinus albus
Lalb_Chr04g0254451 Lupinus albus
Lalb_Chr10g0100471 Lupinus albus
Lalb_Chr17g0342521 Lupinus albus
Lalb_Chr17g0342621 Lupinus albus
Lalb_Chr17g0342631 Lupinus albus
Lalb_Chr17g0342651 Lupinus albus
Lalb_Chr25g0286881 Lupinus albus
Lj1A1103G57 Lonicera japonica
Lj1g0016793 Lotus japonicus
Lj1g0023709 Lotus japonicus
Lj2A732G50 Lonicera japonica
Lj3g0015948 Lotus japonicus
Lj5g0023816 Lotus japonicus
Lj7A501G46 Lonicera japonica
Lj9A597T59 Lonicera japonica
Lj9C597T7 Lonicera japonica
Lsat_1_v5_gn_2_52761 Lactuca sativa
Lsat_1_v5_gn_5_159601 Lactuca sativa
Lsat_1_v5_gn_5_1601 Lactuca sativa
Lsat_1_v5_gn_6_52880 Lactuca sativa
Lsat_1_v5_gn_8_136980 Lactuca sativa
Lsat_1_v5_gn_8_137000 Lactuca sativa
Manes.01G247000 Manihot esculenta
Manes.05G023900 Manihot esculenta
Manes.06G158400 Manihot esculenta
Manes.09G006900 Manihot esculenta
Mapoly0042s0066 Marchantia polymorpha
MBI06_g05048_MAGBIO Magnolia biondii
MBI13_g10208_MAGBIO Magnolia biondii
MBI19_g44504_MAGBIO Magnolia biondii
MD00G1088600 Malus domestica
MD01G1079500 Malus domestica
MD01G1216500 Malus domestica
MD07G1148300 Malus domestica
MD07G1286500 Malus domestica
MD12G1093600 Malus domestica
MD12G1148300 Malus domestica
Medtr1g051245 Medicago truncatula
Medtr3g023770 Medicago truncatula
Medtr4g124580 Medicago truncatula
Medtr6g007730 Medicago truncatula
Medtr7g090270 Medicago truncatula
Medtr7g090290 Medicago truncatula
Medtr8g027760 Medicago truncatula
MELO3C009771.2 Cucumis melo
MELO3C019053.2 Cucumis melo
MELO3C022309.2 Cucumis melo
Migut.B01856 Erythranthe guttata
Migut.J01672 Erythranthe guttata
Migut.K00130 Erythranthe guttata
Migut.N00562 Erythranthe guttata
Migut.N01552 Erythranthe guttata
MSTRG.10795 Avicennia marina
MSTRG.17335 Avicennia marina
MSTRG.18017 Avicennia marina
MSTRG.18879 Avicennia marina
MSTRG.20899 Avicennia marina
MSTRG.26151 Avicennia marina
MSTRG.28255 Avicennia marina
MSTRG.4811 Avicennia marina
MSTRG.6379 Avicennia marina
Nitab4.5_0000141g0200 Nicotiana tabacum
Nitab4.5_0000515g0050 Nicotiana tabacum
Nitab4.5_0000551g0280 Nicotiana tabacum
Nitab4.5_0000571g0130 Nicotiana tabacum
Nitab4.5_0000703g0030 Nicotiana tabacum
Nitab4.5_0000827g0090 Nicotiana tabacum
Nitab4.5_0000827g0100 Nicotiana tabacum
Nitab4.5_0001364g0010 Nicotiana tabacum
Nitab4.5_0002162g0070 Nicotiana tabacum
Nitab4.5_0002208g0090 Nicotiana tabacum
Nitab4.5_0003566g0040 Nicotiana tabacum
Nitab4.5_0004485g0050 Nicotiana tabacum
Nitab4.5_0010129g0010 Nicotiana tabacum
Nitab4.5_0015263g0010 Nicotiana tabacum
Nn1g01886 Nelumbo nucifera
Nn2g14861 Nelumbo nucifera
Nn3g19027 Nelumbo nucifera
Nn7g36658 Nelumbo nucifera
Oeu004591.1 Olea europaea
Oeu004745.2 Olea europaea
Oeu004944.2 Olea europaea
Oeu007902.1 Olea europaea
Oeu008057.1 Olea europaea
Oeu008212.1 Olea europaea
Oeu008693.3 Olea europaea
Oeu019763.2 Olea europaea
Oeu023037.1 Olea europaea
Oeu029497.1 Olea europaea
Oeu043211.2 Olea europaea
Oeu048210.1 Olea europaea
Oeu050738.1 Olea europaea
Oeu052422.1 Olea europaea
Oeu058887.1 Olea europaea
Oeu059662.3 Olea europaea
Oeu063774.1 Olea europaea
Os01g0220200 Oryza sativa ssp. japonica
Os02g0137100 Oryza sativa ssp. japonica
Os05g0212400 Oryza sativa ssp. japonica
Peaxi162Scf00026g03111 Petunia axillaris
Peaxi162Scf00349g00037 Petunia axillaris
Peaxi162Scf00541g00633 Petunia axillaris
Peaxi162Scf00970g00160 Petunia axillaris
Peaxi162Scf01029g00213 Petunia axillaris
Peaxi162Scf01378g00012 Petunia axillaris
PGR031G2052 Punica granatum
PGR031G2986 Punica granatum
PGR031G3066 Punica granatum
PGSC0003DMG400009613 Solanum tuberosum
PGSC0003DMG400029840 Solanum tuberosum
PGSC0003DMG400029851 Solanum tuberosum
PGSC0003DMG400032127 Solanum tuberosum
Phvul.001G125700 Phaseolus vulgaris
Phvul.010G113000 Phaseolus vulgaris
Potri.002G169900 Populus trichocarpa
Potri.006G041200 Populus trichocarpa
Potri.012G001700 Populus trichocarpa
Potri.012G001900 Populus trichocarpa
Potri.014G097800 Populus trichocarpa
Potri.015G014550 Populus trichocarpa
Potri.015G019500 Populus trichocarpa
Potri.016G038100 Populus trichocarpa
Pp3c10_2410 Physcomitrium patens
Pp3c14_2570 Physcomitrium patens
Pp3c14_2574 Physcomitrium patens
PRCOL_00006548 Prasinoderma coloniale
Prupe.2G186600 Prunus persica
Prupe.2G308500 Prunus persica
Prupe.7G042200 Prunus persica
Psat4g160600 Pisum sativum
Psat6g084560 Pisum sativum
Psat6g126040 Pisum sativum
PSO135G0166 Papaver somniferum
PSO170G4448 Papaver somniferum
PSO339G2631 Papaver somniferum
PSO384G1334 Papaver somniferum
PSO384G5067 Papaver somniferum
PSO512G0001 Papaver somniferum
QL04p058035 Quercus lobata
QL07p008869 Quercus lobata
QL07p008880 Quercus lobata
QL08p064255 Quercus lobata
RcHm_v2.0_Chr1g0359301 Rosa chinensis
RcHm_v2.0_Chr1g0380221 Rosa chinensis
RcHm_v2.0_Chr2g0125341 Rosa chinensis
Rhsim01G0172000 Rhododendron simsii
Rhsim04G0110700 Rhododendron simsii
Sabra02G0142400 Salix brachista
Sabra06G0028000 Salix brachista
Sabra12G0019400 Salix brachista
Sabra12G0019600 Salix brachista
Sabra14G0071600 Salix brachista
Sabra15G0014900 Salix brachista
Sabra16G0040000 Salix brachista
Sabra16G0044700 Salix brachista
SalBow1G0421 Salvia bowleyana
SalBow1G1179 Salvia bowleyana
SalBow3G0525 Salvia bowleyana
SalBow3G0733 Salvia bowleyana
SalBow6G4517 Salvia bowleyana
Sc01g0002770 Simmondsia chinensis
Sc19g0008260 Simmondsia chinensis
Sed0000240 Sechium edule
Sed0001996 Sechium edule
Sed0006150 Sechium edule
Sed0016807 Sechium edule
Sed0018551 Sechium edule
Sed0019577 Sechium edule
SEGI_03112 Sequoiadendron giganteum
SEGI_33312 Sequoiadendron giganteum
SEGI_33527 Sequoiadendron giganteum
SEGI_33877 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30303 Striga asiatica
SGA_v2.0_scaffold3G01732 Striga asiatica
SGA_v2.0_scaffold43G16369 Striga asiatica
SGA_v2.0_scaffold5G03012 Striga asiatica
SGA_v2.0_scaffold69G23143 Striga asiatica
SGA_v2.0_scaffold6G03296 Striga asiatica
SGA_v2.0_scaffold94G28528 Striga asiatica
SHI27242 Sapria himalayana
SHI28286 Sapria himalayana
SHI28287 Sapria himalayana
SHI41855 Sapria himalayana
SMO118G0106 Selaginella moellendorffii
Solyc01g005640.4 Solanum lycopersicum
Solyc01g010520.3 Solanum lycopersicum
Solyc05g007270.4 Solanum lycopersicum
Solyc10g079590.1 Solanum lycopersicum
Solyc10g079710.3 Solanum lycopersicum
Sopen01g001660 Solanum pennellii
Sopen01g006170 Solanum pennellii
Sopen05g003230 Solanum pennellii
Sopen10g030230 Solanum pennellii
Sopen10g030340 Solanum pennellii
Sp3g08520 Schrenkiella parvula
Sp4g28440 Schrenkiella parvula
Sp5g01690 Schrenkiella parvula
Sp6g38650 Schrenkiella parvula
TAR369G0839 Trochodendron aralioides
TAR374G0358 Trochodendron aralioides
TAR375G0770 Trochodendron aralioides
TAR629G1909 Trochodendron aralioides
TAR629G2764 Trochodendron aralioides
TAR633G2548 Trochodendron aralioides
TAR636G0484 Trochodendron aralioides
THA.LOC104802063 Tarenaya hassleriana
THA.LOC104803306 Tarenaya hassleriana
THA.LOC104817346 Tarenaya hassleriana
THA.LOC104823210 Tarenaya hassleriana
THA.LOC104826888 Tarenaya hassleriana
Thecc.01G343900 Theobroma cacao
Thecc.05G138800 Theobroma cacao
Thhalv10001501m.g Eutrema salsugineum
Thhalv10006433m.g Eutrema salsugineum
Thhalv10014351m.g Eutrema salsugineum
Thhalv10021137m.g Eutrema salsugineum
TPR.G10124 Trifolium pratense
TPR.G15350 Trifolium pratense
TPR.G19658 Trifolium pratense
TPR.G34401 Trifolium pratense
TPR.G8978 Trifolium pratense
TPR.G9310 Trifolium pratense
TPR.G9319 Trifolium pratense
TWI14G1000 Tripterygium wilfordii
TWI23G0458 Tripterygium wilfordii
TWI23G0869 Tripterygium wilfordii
TWI39G0281 Tripterygium wilfordii
TWI53G1542 Tripterygium wilfordii
TWI59G0130 Tripterygium wilfordii
TWI74G0127 Tripterygium wilfordii
TWI77G0987 Tripterygium wilfordii
unitig_22.g6064 Utricularia gibba
unitig_578.g15978 Utricularia gibba
unitig_62.g23798 Utricularia gibba
unitig_736.g22812 Utricularia gibba
unitig_8.g4559 Utricularia gibba
unitig_8.g4561 Utricularia gibba
unitig_899.g14802 Utricularia gibba
unitig_899.g14803 Utricularia gibba
vmacro09029 Vaccinium macrocarpon
vmacro12680 Vaccinium macrocarpon
VMungo0331G0636 Vigna mungo
VMungo1127G1073 Vigna mungo
VMungo1383G1291 Vigna mungo
Zm00001eb119780 Zea mays
Zm00001eb209240 Zea mays
Zm00001eb227350 Zea mays
Zm00001eb231790 Zea mays
Zm00001eb272770 Zea mays
Zm00001eb338770 Zea mays

User provided reference genes

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