Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06910 Brassica napus
A03p60660 Brassica napus
A06p35630 Brassica napus
A06p38640 Brassica napus
A08p18670 Brassica napus
A09p06380 Brassica napus
A10p26960 Brassica napus
Aa31LG2G18980 Aethionema arabicum
Aa31LG3G16480 Aethionema arabicum
Aa31sc94G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1712 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.16 Anthoceros agrestis
Actinidia01467 Actinidia chinensis
Actinidia07032 Actinidia chinensis
Actinidia40261 Actinidia chinensis
Ah.10g033890 Amaranthus hybridus
Ah.11g043670 Amaranthus hybridus
Ah.11g043680 Amaranthus hybridus
AL6G21160 Arabidopsis lyrata
AL6G36530 Arabidopsis lyrata
AL7G20690 Arabidopsis lyrata
AL8G22240 Arabidopsis lyrata
Aqoxy2G03004 Aquilegia oxysepala
Aqoxy4G02890 Aquilegia oxysepala
Aqoxy7G03054 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TK2KNZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSF1RL Arachis hypogaea
AT4G31380 Arabidopsis thaliana
AT5G10625 Arabidopsis thaliana
AT5G24860 Arabidopsis thaliana
ATR0559G176 Amborella trichopoda
ATR0582G022 Amborella trichopoda
ATR0706G269 Amborella trichopoda
Atru.chr3.3926 Acer truncatum
Atru.chr4.2814 Acer truncatum
Atru.chr7.2624 Acer truncatum
Atru.chr7.2625 Acer truncatum
AUR62009042 Chenopodium quinoa
AUR62020620 Chenopodium quinoa
AUR62032077 Chenopodium quinoa
AUR62038762 Chenopodium quinoa
BcaB01g05512 Brassica carinata
BcaB01g05515 Brassica carinata
BcaB01g05516 Brassica carinata
BcaB01g06263 Brassica carinata
BcaB01g06264 Brassica carinata
BcaB03g12693 Brassica carinata
BcaB04g19803 Brassica carinata
BcaB08g37097 Brassica carinata
BcaC01g01092 Brassica carinata
BcaC01g01093 Brassica carinata
BcaC04g23564 Brassica carinata
BcaC06g30730 Brassica carinata
BcaC06g30732 Brassica carinata
BcaC06g30734 Brassica carinata
BcaC09g51918 Brassica carinata
BcaNung01524 Brassica carinata
BcaNung04575 Brassica carinata
BcaNung04595 Brassica carinata
BNapus_Darmor_BZH_scaffold_241p00110 Brassica napus
BolC1t00746H Brassica oleracea
BolC3t13050H Brassica oleracea
BolC3t21113H Brassica oleracea
BolC7t44485H Brassica oleracea
BolC7t44821H Brassica oleracea
BolC7t46312H Brassica oleracea
BolC9t53623H Brassica oleracea
BolC9t59440H Brassica oleracea
BolC9t59446H Brassica oleracea
BraA01t00640Z Brassica rapa
BraA03t15108Z Brassica rapa
BraA06t26488Z Brassica rapa
BraA06t26779Z Brassica rapa
BraA08t33828Z Brassica rapa
BraA09t36283Z Brassica rapa
BraA10t44747Z Brassica rapa
C01p07660 Brassica napus
C03p05370 Brassica napus
C03p88020 Brassica napus
C07p39620 Brassica napus
C07p42920 Brassica napus
C07p58570 Brassica napus
C09p07070 Brassica napus
C09p07100 Brassica napus
C09p66190 Brassica napus
C09p66400 Brassica napus
C09p66480 Brassica napus
C09p66560 Brassica napus
C09p66650 Brassica napus
CAN.G129.1 Capsicum annuum
CAN.G129.4 Capsicum annuum
CAN.G719.5 Capsicum annuum
CANSAT25G2599 Cannabis sativa
CANSAT54G2208 Cannabis sativa
CANSAT78G0654 Cannabis sativa
CARHR188590 Cardamine hirsuta
CARHR202680 Cardamine hirsuta
CARHR239260 Cardamine hirsuta
CARHR293690 Cardamine hirsuta
Carub.0006s0911 Capsella rubella
Carub.0006s2271 Capsella rubella
Carub.0007s0918 Capsella rubella
Ca_01323_v3 Cicer arietinum L.
Ca_01947_v3 Cicer arietinum L.
Ca_12875_v3 Cicer arietinum L.
Ca_21527_v3 Cicer arietinum L.
Cc00_g10520 Coffea canephora
Cc00_g10530 Coffea canephora
Cc01_g12940 Coffea canephora
Cc10_g08700 Coffea canephora
Cc11_g07120 Coffea canephora
Cfa013257 Carpinus fangiana
Cfa015378 Carpinus fangiana
Ciclev10006149m.g Citrus clementina
Ciclev10009959m.g Citrus clementina
Ciclev10030377m.g Citrus clementina
CiPaw.01G149300 Carya illinoinensis
CiPaw.02G083500 Carya illinoinensis
CiPaw.07G214100 Carya illinoinensis
CiPaw.08G018200 Carya illinoinensis
CiPaw.13G093500 Carya illinoinensis
ClCG02G020080 Citrullus lanatus
ClCG05G017470 Citrullus lanatus
ClCG06G005170 Citrullus lanatus
ClCG08G012740 Citrullus lanatus
COL.COLO4_13884 Corchorus olitorius
COL.COLO4_13888 Corchorus olitorius
COL.COLO4_19048 Corchorus olitorius
Cpa.g.c47211 Carica papaya
Cpa.g.sc1312.1 Carica papaya
Cpa.g.sc81.137 Carica papaya
CsaV3_2G031470 Cucumis sativus L.
CsaV3_3G014570 Cucumis sativus L.
CsaV3_3G046970 Cucumis sativus L.
CsaV3_6G017220 Cucumis sativus L.
CSS0002887 Camellia sinensis var. sinensis
CSS0003641 Camellia sinensis var. sinensis
CSS0011506 Camellia sinensis var. sinensis
CSS0019625 Camellia sinensis var. sinensis
CSS0030374 Camellia sinensis var. sinensis
CSS0045985 Camellia sinensis var. sinensis
DCAR_000662 Daucus carota
DCAR_000663 Daucus carota
DCAR_002464 Daucus carota
DCAR_004580 Daucus carota
DCAR_004582 Daucus carota
DCAR_004583 Daucus carota
DCAR_005970 Daucus carota
DCAR_024564 Daucus carota
DCAR_027080 Daucus carota
Dinv02220 Davidia involucrata
Dinv04643 Davidia involucrata
Dinv07973 Davidia involucrata
Dinv17010 Davidia involucrata
Dinv20973 Davidia involucrata
Dinv21032 Davidia involucrata
Dinv29768 Davidia involucrata
Dinv42959 Davidia involucrata
Dinv43140 Davidia involucrata
Dinv44387 Davidia involucrata
Duzib052G1180 Durio zibethinus
Duzib151G0772 Durio zibethinus
Duzib168G1055 Durio zibethinus
Duzib168G1319 Durio zibethinus
Duzib170G1078 Durio zibethinus
ECA240G3391 Erigeron canadensis
ECA246G5137 Erigeron canadensis
EL10Ac2g03725 Beta vulgaris
EL10Ac2g03727 Beta vulgaris
EL10Ac4g09094 Beta vulgaris
EL10Ac4g09095 Beta vulgaris
Eucgr.B01304 Eucalyptus grandis
Eucgr.B01307 Eucalyptus grandis
Eucgr.B02361 Eucalyptus grandis
Eucgr.C02099 Eucalyptus grandis
Eucgr.C04001 Eucalyptus grandis
Eucgr.H03903 Eucalyptus grandis
FAN07G1968 Fragaria x ananassa
FAN11G1711 Fragaria x ananassa
FAN12G0622 Fragaria x ananassa
FAN12G3724 Fragaria x ananassa
FAN15G2969 Fragaria x ananassa
FAN16G3512 Fragaria x ananassa
FAN17G0718 Fragaria x ananassa
FAN20G1034 Fragaria x ananassa
FAN21G0956 Fragaria x ananassa
FAN24G3051 Fragaria x ananassa
FAN25G2811 Fragaria x ananassa
FAN27G2848 Fragaria x ananassa
FvH4_2g30770 Fragaria vesca
FvH4_3g36220 Fragaria vesca
FvH4_4g17910 Fragaria vesca
Glyma.04G074800 Glycine max
Glyma.07G248400 Glycine max
Glyma.09G045500 Glycine max
Glyma.09G045600 Glycine max
Glyma.13G336400 Glycine max
Glyma.14G133300 Glycine max
Glyma.15G037900 Glycine max
Glyma.15G147000 Glycine max
Glyma.17G025700 Glycine max
Glyma.17G202100 Glycine max
Gohir.A01G031951 Gossypium hirsutum
Gohir.A02G048901 Gossypium hirsutum
Gohir.A05G065500 Gossypium hirsutum
Gohir.A06G106500 Gossypium hirsutum
Gohir.A07G098700 Gossypium hirsutum
Gohir.A08G000500 Gossypium hirsutum
Gohir.A09G239700 Gossypium hirsutum
Gohir.A10G163500 Gossypium hirsutum
Gohir.D01G023475 Gossypium hirsutum
Gohir.D02G054233 Gossypium hirsutum
Gohir.D02G054266 Gossypium hirsutum
Gohir.D05G068100 Gossypium hirsutum
Gohir.D06G108700 Gossypium hirsutum
Gohir.D07G103200 Gossypium hirsutum
Gohir.D09G240600 Gossypium hirsutum
Gohir.D10G169900 Gossypium hirsutum
Gorai.001G111000 Gossypium raimondii
Gorai.002G028100 Gossypium raimondii
Gorai.004G005100 Gossypium raimondii
Gorai.005G059800 Gossypium raimondii
Gorai.005G059900 Gossypium raimondii
Gorai.006G263600 Gossypium raimondii
Gorai.009G068900 Gossypium raimondii
Gorai.010G123400 Gossypium raimondii
Gorai.011G189300 Gossypium raimondii
GSVIVG01017750001 Vitis vinifera
GSVIVG01035540001 Vitis vinifera
HanXRQChr03g0070781 Helianthus annuus
HanXRQChr03g0080831 Helianthus annuus
HanXRQChr06g0174291 Helianthus annuus
HanXRQChr13g0411391 Helianthus annuus
HanXRQChr17g0538921 Helianthus annuus
HanXRQChr17g0538931 Helianthus annuus
HanXRQChr17g0538941 Helianthus annuus
HanXRQChr17g0538951 Helianthus annuus
Haze_01217 Corylus avellana
Haze_21711 Corylus avellana
Haze_24106 Corylus avellana
Hma1.2p1_0078F.1_g040660 Hydrangea macrophylla
Hma1.2p1_0418F.1_g149260 Hydrangea macrophylla
Hma1.2p1_0698F.1_g205200 Hydrangea macrophylla
Hma1.2p1_1542F.1_g289735 Hydrangea macrophylla
Hma1.2p1_1567F.1_g291070 Hydrangea macrophylla
HPP92_025219 Vanilla planifolia
HPP92_025220 Vanilla planifolia
HPP92_026818 Vanilla planifolia
Lalb_Chr07g0177691 Lupinus albus
Lalb_Chr13g0303651 Lupinus albus
Lalb_Chr14g0362231 Lupinus albus
Lalb_Chr22g0349921 Lupinus albus
Lalb_Chr22g0361271 Lupinus albus
Lj1P151T28 Lonicera japonica
Lj3g0015352 Lotus japonicus
Lj3P816T17 Lonicera japonica
Lj4g0020093 Lotus japonicus
Lj5g0002357 Lotus japonicus
Lj6g0007610 Lotus japonicus
LjContig00272g0007044 Lotus japonicus
Lsat_1_v5_gn_3_27320 Lactuca sativa
Lsat_1_v5_gn_5_52340 Lactuca sativa
Lsat_1_v5_gn_5_52601 Lactuca sativa
Lsat_1_v5_gn_5_53461 Lactuca sativa
Lsat_1_v5_gn_9_43641 Lactuca sativa
Manes.01G173200 Manihot esculenta
Manes.02G132300 Manihot esculenta
Manes.03G002600 Manihot esculenta
Manes.03G194300 Manihot esculenta
Manes.15G013100 Manihot esculenta
Manes.16G136500 Manihot esculenta
Mapoly0158s0029 Marchantia polymorpha
MBI05_g47676_MAGBIO Magnolia biondii
MBI14_g17370_MAGBIO Magnolia biondii
MBI16_g39835_MAGBIO Magnolia biondii
MBI18_g14084_MAGBIO Magnolia biondii
MBI19_g41923_MAGBIO Magnolia biondii
MD00G1012500 Malus domestica
MD03G1092000 Malus domestica
MD08G1131700 Malus domestica
MD13G1169600 Malus domestica
MD15G1109300 Malus domestica
MD16G1169700 Malus domestica
Medtr1g009900 Medicago truncatula
Medtr2g096990 Medicago truncatula
Medtr2g436880 Medicago truncatula
Medtr4g119790 Medicago truncatula
MELO3C003640.2 Cucumis melo
MELO3C006658.2 Cucumis melo
MELO3C011197.2 Cucumis melo
MELO3C021334.2 Cucumis melo
MELO3C025908.2 Cucumis melo
Migut.C01375 Erythranthe guttata
Migut.G00169 Erythranthe guttata
Migut.G00170 Erythranthe guttata
Migut.M00196 Erythranthe guttata
Migut.M00230 Erythranthe guttata
Migut.M00233 Erythranthe guttata
Nitab4.5_0000213g0170 Nicotiana tabacum
Nitab4.5_0000272g0140 Nicotiana tabacum
Nitab4.5_0000398g0020 Nicotiana tabacum
Nitab4.5_0000570g0090 Nicotiana tabacum
Nitab4.5_0000831g0050 Nicotiana tabacum
Nitab4.5_0000960g0140 Nicotiana tabacum
Nitab4.5_0003436g0120 Nicotiana tabacum
Nitab4.5_0005107g0010 Nicotiana tabacum
Nitab4.5_0007164g0010 Nicotiana tabacum
Nitab4.5_0014470g0010 Nicotiana tabacum
Nitab4.5_0025830g0010 Nicotiana tabacum
Nn2g11120 Nelumbo nucifera
Nn2g12768 Nelumbo nucifera
Nn2g13358 Nelumbo nucifera
Nn3g21187 Nelumbo nucifera
Nn3g21191 Nelumbo nucifera
Nn3g21423 Nelumbo nucifera
Nn4g25885 Nelumbo nucifera
Nn4g25886 Nelumbo nucifera
Nn4g25887 Nelumbo nucifera
Nn4g25888 Nelumbo nucifera
Oeu006622.1 Olea europaea
Oeu023286.1 Olea europaea
Oeu023290.1 Olea europaea
Oeu027730.1 Olea europaea
Oeu028108.1 Olea europaea
Oeu029091.1 Olea europaea
Oeu030568.1 Olea europaea
Oeu063353.1 Olea europaea
Os01g0257300 Oryza sativa ssp. japonica
Os01g0933500 Oryza sativa ssp. japonica
Os02g0460200 Oryza sativa ssp. japonica
Os04g0282400 Oryza sativa ssp. japonica
Os07g0671000 Oryza sativa ssp. japonica
Peaxi162Scf00056g00139 Petunia axillaris
Peaxi162Scf00078g00059 Petunia axillaris
Peaxi162Scf00086g00036 Petunia axillaris
Peaxi162Scf00534g00005 Petunia axillaris
Peaxi162Scf00534g00012 Petunia axillaris
PGR004G0991 Punica granatum
PGR004G1387 Punica granatum
PGR004G1684 Punica granatum
PGR031G3011 Punica granatum
PGR044G0117 Punica granatum
PGR044G0666 Punica granatum
PGR102G1382 Punica granatum
PGSC0003DMG400004405 Solanum tuberosum
PGSC0003DMG400004638 Solanum tuberosum
PGSC0003DMG400011345 Solanum tuberosum
PGSC0003DMG400011346 Solanum tuberosum
Phvul.001G058400 Phaseolus vulgaris
Phvul.003G104600 Phaseolus vulgaris
Phvul.009G100300 Phaseolus vulgaris
Phvul.009G247200 Phaseolus vulgaris
Phvul.009G247300 Phaseolus vulgaris
Phvul.L005843 Phaseolus vulgaris
Potri.006G276100 Populus trichocarpa
Potri.008G209300 Populus trichocarpa
Potri.009G031600 Populus trichocarpa
Potri.010G024500 Populus trichocarpa
Potri.018G005200 Populus trichocarpa
Pp3c18_17280 Physcomitrium patens
Pp3c18_7850 Physcomitrium patens
Pp3c21_16210 Physcomitrium patens
Prupe.1G137800 Prunus persica
Prupe.1G461600 Prunus persica
Prupe.6G075900 Prunus persica
Psat1g152680 Pisum sativum
Psat4g027240 Pisum sativum
Psat5g284760 Pisum sativum
Psat6g007880 Pisum sativum
PSO063G3142 Papaver somniferum
PSO170G1303 Papaver somniferum
PSO170G3827 Papaver somniferum
PSO210G0903 Papaver somniferum
QL01p031744 Quercus lobata
QL06p008698 Quercus lobata
QL12p024792 Quercus lobata
QL12p024798 Quercus lobata
RcHm_v2.0_Chr4g0422041 Rosa chinensis
RcHm_v2.0_Chr5g0065031 Rosa chinensis
RcHm_v2.0_Chr6g0312131 Rosa chinensis
Rhsim04G0220800 Rhododendron simsii
Rhsim04G0220900 Rhododendron simsii
Rhsim04G0221000 Rhododendron simsii
Rhsim13G0082100 Rhododendron simsii
Rhsim13G0082200 Rhododendron simsii
Sabra06G0213800 Salix brachista
Sabra08G0154100 Salix brachista
Sabra09G0022300 Salix brachista
Sabra10G0014500 Salix brachista
Sabra16G0145300 Salix brachista
Sabra18G0000100 Salix brachista
Sabra18G0010800 Salix brachista
SalBow2G1771 Salvia bowleyana
SalBow2G3093 Salvia bowleyana
SalBow7G3306 Salvia bowleyana
Sc06g0001200 Simmondsia chinensis
Sc09g0008010 Simmondsia chinensis
Sc09g0008030 Simmondsia chinensis
Sc19g0005130 Simmondsia chinensis
Sc19g0005140 Simmondsia chinensis
Sed0002275 Sechium edule
Sed0004750 Sechium edule
Sed0005618 Sechium edule
Sed0009836 Sechium edule
Sed0010307 Sechium edule
Sed0013126 Sechium edule
Sed0016817 Sechium edule
Sed0017207 Sechium edule
Sed0020574 Sechium edule
SEGI_12311 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32608 Striga asiatica
SGA_v2.0_scaffold147G36280 Striga asiatica
SGA_v2.0_scaffold24G10644 Striga asiatica
SGA_v2.0_scaffold67G22643 Striga asiatica
SMO117G0148 Selaginella moellendorffii
SMO119G0038 Selaginella moellendorffii
SMO139G0119 Selaginella moellendorffii
SMO266G0014 Selaginella moellendorffii
Solyc01g066950.1 Solanum lycopersicum
Solyc01g066970.2 Solanum lycopersicum
Solyc01g066980.3 Solanum lycopersicum
Solyc06g005530.2 Solanum lycopersicum
Solyc12g099610.1 Solanum lycopersicum
Sopen01g028590 Solanum pennellii
Sopen01g028610 Solanum pennellii
Sopen01g028630 Solanum pennellii
Sopen01g028640 Solanum pennellii
Sopen06g001510 Solanum pennellii
Sp2g19370 Schrenkiella parvula
Sp2g22590 Schrenkiella parvula
Sp6g32820 Schrenkiella parvula
Sp7g29240 Schrenkiella parvula
TAR362G1178 Trochodendron aralioides
TAR362G1218 Trochodendron aralioides
TAR623G1669 Trochodendron aralioides
TAR625G0597 Trochodendron aralioides
TAR626G1596 Trochodendron aralioides
TAR633G0872 Trochodendron aralioides
THA.LOC104799008 Tarenaya hassleriana
THA.LOC104803320 Tarenaya hassleriana
THA.LOC104803593 Tarenaya hassleriana
THA.LOC104803877 Tarenaya hassleriana
THA.LOC104818927 Tarenaya hassleriana
THA.LOC104819930 Tarenaya hassleriana
THA.LOC104827345 Tarenaya hassleriana
Thecc.04G283600 Theobroma cacao
Thecc.09G005700 Theobroma cacao
Thecc.09G320500 Theobroma cacao
Thhalv10005169m.g Eutrema salsugineum
Thhalv10005622m.g Eutrema salsugineum
Thhalv10015065m.g Eutrema salsugineum
Thhalv10027309m.g Eutrema salsugineum
TPR.G12062 Trifolium pratense
TPR.G18379 Trifolium pratense
TPR.G18380 Trifolium pratense
TPR.G3192 Trifolium pratense
TPR.G34312 Trifolium pratense
TPR.G4970 Trifolium pratense
TPR.G5013 Trifolium pratense
TPR.G691 Trifolium pratense
TPR.G7725 Trifolium pratense
TWI09G0975 Tripterygium wilfordii
TWI31G1248 Tripterygium wilfordii
TWI32G0869 Tripterygium wilfordii
TWI34G0465 Tripterygium wilfordii
TWI73G1256 Tripterygium wilfordii
unitig_0.g2597 Utricularia gibba
unitig_46.g17985 Utricularia gibba
unitig_748.g8734 Utricularia gibba
vmacro03067 Vaccinium macrocarpon
VMungo0647G2413 Vigna mungo
VMungo1080G1828 Vigna mungo
VMungo1215G0521 Vigna mungo
VMungo1309G1722 Vigna mungo
VMungo1309G2008 Vigna mungo
Zm00001eb087080 Zea mays
Zm00001eb111110 Zea mays
Zm00001eb127820 Zea mays
Zm00001eb142230 Zea mays
Zm00001eb330310 Zea mays
Zm00001eb333480 Zea mays
Zm00001eb420160 Zea mays

User provided reference genes

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