Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14810 Brassica napus
A03p54470 Brassica napus
A06p14860 Brassica napus
A07p40260 Brassica napus
A08p06470 Brassica napus
A08p16180 Brassica napus
A09p14020 Brassica napus
A09p27840 Brassica napus
A09p59700 Brassica napus
Aa31LG2G1040 Aethionema arabicum
Aa31LG4G4700 Aethionema arabicum
Aa31LG6G6740 Aethionema arabicum
Aa31LG6G9860 Aethionema arabicum
Aa31LG7G3530 Aethionema arabicum
Aa31LG9G10900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1860 Anthoceros agrestis
Actinidia10604 Actinidia chinensis
Actinidia10646 Actinidia chinensis
Actinidia17790 Actinidia chinensis
Actinidia27256 Actinidia chinensis
Actinidia27262 Actinidia chinensis
Actinidia28350 Actinidia chinensis
Actinidia39066 Actinidia chinensis
Ah.05g167930 Amaranthus hybridus
Ah.12g051850 Amaranthus hybridus
AL1G31210 Arabidopsis lyrata
AL1G51670 Arabidopsis lyrata
AL2G11180 Arabidopsis lyrata
AL2G34310 Arabidopsis lyrata
AL6G45680 Arabidopsis lyrata
AL7G29880 Arabidopsis lyrata
Aqoxy5G02080 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A6PL5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3H7S2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7U4Q0 Arachis hypogaea
AT1G18740 Arabidopsis thaliana
AT1G43630 Arabidopsis thaliana
AT1G63930 Arabidopsis thaliana
AT1G74450 Arabidopsis thaliana
AT4G11300 Arabidopsis thaliana
AT4G23530 Arabidopsis thaliana
ATR0661G524 Amborella trichopoda
ATR0820G087 Amborella trichopoda
Atru.chr13.2100 Acer truncatum
Atru.chr6.984 Acer truncatum
Atru.chr9.2125 Acer truncatum
AUR62010743 Chenopodium quinoa
AUR62013590 Chenopodium quinoa
AUR62019747 Chenopodium quinoa
AUR62026704 Chenopodium quinoa
BcaB01g01628 Brassica carinata
BcaB03g11764 Brassica carinata
BcaB03g14480 Brassica carinata
BcaB04g17625 Brassica carinata
BcaB07g31536 Brassica carinata
BcaB07g31891 Brassica carinata
BcaC01g00819 Brassica carinata
BcaC04g21128 Brassica carinata
BcaC04g22666 Brassica carinata
BcaC04g22667 Brassica carinata
BcaC04g22668 Brassica carinata
BcaC05g25774 Brassica carinata
BcaC07g37312 Brassica carinata
BcaC07g38942 Brassica carinata
BcaC07g41295 Brassica carinata
BcaC08g46875 Brassica carinata
BcaC08g46877 Brassica carinata
BcaC08g46996 Brassica carinata
BcaC08g46997 Brassica carinata
BcaC09g50981 Brassica carinata
BcaNung01062 Brassica carinata
BcaNung04489 Brassica carinata
BcaNung06503 Brassica carinata
BolC1t01773H Brassica oleracea
BolC3t20760H Brassica oleracea
BolC5t30411H Brassica oleracea
BolC6t39893H Brassica oleracea
BolC7t45779H Brassica oleracea
BolC8t47591H Brassica oleracea
BolC8t49514H Brassica oleracea
BolC8t51860H Brassica oleracea
BolC9t54587H Brassica oleracea
BolC9t56369H Brassica oleracea
BraA01t01422Z Brassica rapa
BraA03t14513Z Brassica rapa
BraA06t24607Z Brassica rapa
BraA07t31570Z Brassica rapa
BraA08t32656Z Brassica rapa
BraA08t33587Z Brassica rapa
BraA09t37048Z Brassica rapa
BraA09t38353Z Brassica rapa
BraA09t41347Z Brassica rapa
C01p18500 Brassica napus
C03p84710 Brassica napus
C05p17050 Brassica napus
C06p48630 Brassica napus
C07p52810 Brassica napus
C08p07460 Brassica napus
C08p18900 Brassica napus
C08p43050 Brassica napus
C09p16890 Brassica napus
C09p35260 Brassica napus
CAN.G1702.3 Capsicum annuum
CAN.G18.13 Capsicum annuum
CAN.G268.25 Capsicum annuum
CAN.G532.30 Capsicum annuum
CANSAT11G2203 Cannabis sativa
CANSAT21G2555 Cannabis sativa
CANSAT25G3324 Cannabis sativa
CARHR019380 Cardamine hirsuta
CARHR035640 Cardamine hirsuta
CARHR047040 Cardamine hirsuta
CARHR067720 Cardamine hirsuta
CARHR230920 Cardamine hirsuta
CARHR255280 Cardamine hirsuta
Carub.0001s1839 Capsella rubella
Carub.0001s3462 Capsella rubella
Carub.0002s0091 Capsella rubella
Carub.0002s2122 Capsella rubella
Carub.0006s3018 Capsella rubella
Carub.0007s1774 Capsella rubella
Ca_10685_v3 Cicer arietinum L.
Ca_10947_v3 Cicer arietinum L.
Ca_17511_v3 Cicer arietinum L.
Ca_18322_v3 Cicer arietinum L.
Ca_26817_v3 Cicer arietinum L.
Cc02_g22070 Coffea canephora
Cc08_g15190 Coffea canephora
Cc10_g14410 Coffea canephora
CDE02G3209 Ceratophyllum demersum
CDE04G0190 Ceratophyllum demersum
CDE06G2661 Ceratophyllum demersum
CDE07G1607 Ceratophyllum demersum
CDE08G0234 Ceratophyllum demersum
CDE08G1632 Ceratophyllum demersum
CDE11G0825 Ceratophyllum demersum
CDE12G0739 Ceratophyllum demersum
Cfa005560 Carpinus fangiana
Cfa012236 Carpinus fangiana
Cfa012791 Carpinus fangiana
Cfa014472 Carpinus fangiana
Cfa014473 Carpinus fangiana
Cfa018320 Carpinus fangiana
Ciclev10001436m.g Citrus clementina
Ciclev10001440m.g Citrus clementina
Ciclev10020506m.g Citrus clementina
CiPaw.02G080000 Carya illinoinensis
CiPaw.06G149900 Carya illinoinensis
CiPaw.07G211600 Carya illinoinensis
CiPaw.11G130300 Carya illinoinensis
CiPaw.12G089800 Carya illinoinensis
CiPaw.16G012300 Carya illinoinensis
ClCG07G007950 Citrullus lanatus
ClCG08G007060 Citrullus lanatus
ClCG09G010180 Citrullus lanatus
COL.COLO4_08368 Corchorus olitorius
COL.COLO4_08564 Corchorus olitorius
Cpa.g.sc21.204 Carica papaya
Cpa.g.sc214.6 Carica papaya
CsaV3_4G006070 Cucumis sativus L.
CsaV3_6G005140 Cucumis sativus L.
CsaV3_7G024550 Cucumis sativus L.
CSS0010365 Camellia sinensis var. sinensis
CSS0014526 Camellia sinensis var. sinensis
CSS0015355 Camellia sinensis var. sinensis
CSS0021793 Camellia sinensis var. sinensis
CSS0022678 Camellia sinensis var. sinensis
CSS0048513 Camellia sinensis var. sinensis
DCAR_001138 Daucus carota
DCAR_004613 Daucus carota
DCAR_008356 Daucus carota
Dinv19339 Davidia involucrata
Dinv24250 Davidia involucrata
Dinv25869 Davidia involucrata
Dinv37601 Davidia involucrata
Dinv38903 Davidia involucrata
Dinv41079 Davidia involucrata
Duzib041G0708 Durio zibethinus
Duzib068G0908 Durio zibethinus
Duzib084G0632 Durio zibethinus
Duzib116G0316 Durio zibethinus
Duzib205G0948 Durio zibethinus
ECA233G0483 Erigeron canadensis
ECA234G3123 Erigeron canadensis
ECA236G3619 Erigeron canadensis
ECA240G2659 Erigeron canadensis
ECA246G3159 Erigeron canadensis
ECA247G0531 Erigeron canadensis
EL10Ac1g01551 Beta vulgaris
EL10Ac5g12829 Beta vulgaris
EL10Ac6g14051 Beta vulgaris
Eucgr.C01675 Eucalyptus grandis
Eucgr.D01818 Eucalyptus grandis
Eucgr.F02702 Eucalyptus grandis
FAN04G0495 Fragaria x ananassa
FAN04G2444 Fragaria x ananassa
FAN08G3440 Fragaria x ananassa
FAN13G0842 Fragaria x ananassa
FAN13G2732 Fragaria x ananassa
FAN15G1798 Fragaria x ananassa
FAN18G0015 Fragaria x ananassa
FAN18G3818 Fragaria x ananassa
FAN20G2866 Fragaria x ananassa
FAN27G1314 Fragaria x ananassa
FvH4_2g13680 Fragaria vesca
FvH4_5g03120 Fragaria vesca
FvH4_5g30220 Fragaria vesca
Glyma.02G081400 Glycine max
Glyma.05G122100 Glycine max
Glyma.05G211400 Glycine max
Glyma.08G017700 Glycine max
Glyma.08G076900 Glycine max
Glyma.08G183300 Glycine max
Glyma.10G224500 Glycine max
Glyma.16G166800 Glycine max
Glyma.20G167300 Glycine max
Gohir.A02G063900 Gossypium hirsutum
Gohir.A02G112701 Gossypium hirsutum
Gohir.A03G021000 Gossypium hirsutum
Gohir.A05G126400 Gossypium hirsutum
Gohir.A05G270300 Gossypium hirsutum
Gohir.A12G233800 Gossypium hirsutum
Gohir.D02G069500 Gossypium hirsutum
Gohir.D03G060610 Gossypium hirsutum
Gohir.D03G147800 Gossypium hirsutum
Gohir.D05G127300 Gossypium hirsutum
Gohir.D05G272400 Gossypium hirsutum
Gohir.D12G233600 Gossypium hirsutum
Gorai.003G155300 Gossypium raimondii
Gorai.005G078800 Gossypium raimondii
Gorai.008G249900 Gossypium raimondii
Gorai.009G131400 Gossypium raimondii
Gorai.009G285400 Gossypium raimondii
Gorai.013G111100 Gossypium raimondii
GSVIVG01019411001 Vitis vinifera
GSVIVG01029699001 Vitis vinifera
HanXRQChr02g0040711 Helianthus annuus
HanXRQChr03g0066441 Helianthus annuus
HanXRQChr03g0071361 Helianthus annuus
HanXRQChr04g0108921 Helianthus annuus
HanXRQChr05g0161951 Helianthus annuus
HanXRQChr10g0294811 Helianthus annuus
HanXRQChr10g0312001 Helianthus annuus
HanXRQChr13g0393891 Helianthus annuus
HanXRQChr14g0434511 Helianthus annuus
HanXRQChr16g0513921 Helianthus annuus
HanXRQChr16g0514171 Helianthus annuus
HanXRQChr16g0528761 Helianthus annuus
Haze_01598 Corylus avellana
Haze_08766 Corylus avellana
Haze_08769 Corylus avellana
Haze_17756 Corylus avellana
Hma1.2p1_0105F.1_g050635 Hydrangea macrophylla
Hma1.2p1_0216F.1_g091000 Hydrangea macrophylla
Hma1.2p1_0299F.1_g117820 Hydrangea macrophylla
Hma1.2p1_1712F.1_g298810 Hydrangea macrophylla
HPP92_000066 Vanilla planifolia
HPP92_002529 Vanilla planifolia
HPP92_004424 Vanilla planifolia
HPP92_006824 Vanilla planifolia
HPP92_006829 Vanilla planifolia
HPP92_012896 Vanilla planifolia
HPP92_012917 Vanilla planifolia
HPP92_013765 Vanilla planifolia
HPP92_019357 Vanilla planifolia
HPP92_022431 Vanilla planifolia
HPP92_025866 Vanilla planifolia
Hund14277 Selenicereus undatus
Lalb_Chr01g0009571 Lupinus albus
Lalb_Chr03g0035361 Lupinus albus
Lalb_Chr05g0224531 Lupinus albus
Lalb_Chr07g0189331 Lupinus albus
Lalb_Chr09g0332991 Lupinus albus
Lalb_Chr13g0291561 Lupinus albus
Lalb_Chr21g0305481 Lupinus albus
Lj2A179T36 Lonicera japonica
Lj2g0022356 Lotus japonicus
Lj3g0024922 Lotus japonicus
Lj4g0011133 Lotus japonicus
Lj4g0015718 Lotus japonicus
Lj4P697T15 Lonicera japonica
Lj5g0017056 Lotus japonicus
Lj5P245T26 Lonicera japonica
Lj7P374T12 Lonicera japonica
Lj8A216T75 Lonicera japonica
Lsat_1_v5_gn_1_6001 Lactuca sativa
Lsat_1_v5_gn_1_92800 Lactuca sativa
Lsat_1_v5_gn_3_8940 Lactuca sativa
Lsat_1_v5_gn_5_107500 Lactuca sativa
Lsat_1_v5_gn_6_4621 Lactuca sativa
Lsat_1_v5_gn_7_79561 Lactuca sativa
Lsat_1_v5_gn_9_116001 Lactuca sativa
Lsat_1_v5_gn_9_40860 Lactuca sativa
Manes.01G057300 Manihot esculenta
Manes.02G017500 Manihot esculenta
Manes.02G179700 Manihot esculenta
Manes.09G173900 Manihot esculenta
Manes.10G000357 Manihot esculenta
Manes.18G092500 Manihot esculenta
MBI04_g26960_MAGBIO Magnolia biondii
MBI09_g42173_MAGBIO Magnolia biondii
MBI09_g44997_MAGBIO Magnolia biondii
MBI17_g40129_MAGBIO Magnolia biondii
MD05G1026700 Malus domestica
MD06G1090100 Malus domestica
MD10G1025900 Malus domestica
MD14G1111100 Malus domestica
MD15G1417800 Malus domestica
Medtr1g098700 Medicago truncatula
Medtr4g094375 Medicago truncatula
Medtr6g036920 Medicago truncatula
Medtr6g036980 Medicago truncatula
Medtr6g037000 Medicago truncatula
Medtr6g037010 Medicago truncatula
Medtr6g037060 Medicago truncatula
Medtr6g037070 Medicago truncatula
Medtr8g098895 Medicago truncatula
MELO3C008335.2 Cucumis melo
MELO3C016342.2 Cucumis melo
MELO3C024075.2 Cucumis melo
Migut.A00729 Erythranthe guttata
Migut.C00997 Erythranthe guttata
Migut.E01207 Erythranthe guttata
Migut.H02468 Erythranthe guttata
Migut.N01023 Erythranthe guttata
Migut.N03214 Erythranthe guttata
MSTRG.1086 Avicennia marina
MSTRG.22365 Avicennia marina
MSTRG.24214 Avicennia marina
MSTRG.25632 Avicennia marina
MSTRG.5248 Avicennia marina
Nitab4.5_0001062g0050 Nicotiana tabacum
Nitab4.5_0002452g0020 Nicotiana tabacum
Nitab4.5_0002487g0010 Nicotiana tabacum
Nitab4.5_0003015g0010 Nicotiana tabacum
Nitab4.5_0004051g0040 Nicotiana tabacum
Nitab4.5_0004505g0010 Nicotiana tabacum
Nitab4.5_0009570g0020 Nicotiana tabacum
Nn2g12620 Nelumbo nucifera
Nn5g28752 Nelumbo nucifera
Nn6g33279 Nelumbo nucifera
Oeu000649.1 Olea europaea
Oeu000650.1 Olea europaea
Oeu002055.1 Olea europaea
Oeu011948.1 Olea europaea
Oeu025084.1 Olea europaea
Oeu025131.1 Olea europaea
Oeu046039.1 Olea europaea
Oeu049846.1 Olea europaea
Oeu051269.2 Olea europaea
Os02g0109200 Oryza sativa ssp. japonica
Os04g0688000 Oryza sativa ssp. japonica
Os11g0163800 Oryza sativa ssp. japonica
Os12g0164600 Oryza sativa ssp. japonica
Peaxi162Scf00074g00182 Petunia axillaris
Peaxi162Scf00599g00043 Petunia axillaris
Peaxi162Scf01290g00028 Petunia axillaris
Peaxi162Scf01294g00015 Petunia axillaris
PGR080G0001 Punica granatum
PGR100G0010 Punica granatum
PGR142G1654 Punica granatum
PGR142G3164 Punica granatum
PGSC0003DMG400012323 Solanum tuberosum
PGSC0003DMG400024100 Solanum tuberosum
PGSC0003DMG400029756 Solanum tuberosum
PGSC0003DMG401010796 Solanum tuberosum
Phvul.002G204100 Phaseolus vulgaris
Phvul.002G292700 Phaseolus vulgaris
Phvul.004G094800 Phaseolus vulgaris
Phvul.006G210600 Phaseolus vulgaris
Phvul.007G080200 Phaseolus vulgaris
Potri.001G099700 Populus trichocarpa
Potri.002G067800 Populus trichocarpa
Potri.003G132100 Populus trichocarpa
Potri.005G192600 Populus trichocarpa
Prupe.1G561900 Prunus persica
Prupe.5G105900 Prunus persica
Prupe.8G031200 Prunus persica
Psat1g101720 Pisum sativum
Psat1g101760 Pisum sativum
Psat6g192640 Pisum sativum
Psat7g030400 Pisum sativum
Psat7g095720 Pisum sativum
PSO478G4406 Papaver somniferum
PSO541G5111 Papaver somniferum
PSO675G9196 Papaver somniferum
PSO782G1361 Papaver somniferum
QL02p039051 Quercus lobata
QL03p006404 Quercus lobata
QL11p018986 Quercus lobata
QL12p031904 Quercus lobata
RcHm_v2.0_Chr6g0275361 Rosa chinensis
RcHm_v2.0_Chr7g0196671 Rosa chinensis
RcHm_v2.0_Chr7g0224471 Rosa chinensis
Rhsim02G0235200 Rhododendron simsii
Rhsim04G0100200 Rhododendron simsii
Rhsim11G0132900 Rhododendron simsii
Sabra01G0074800 Salix brachista
Sabra02G0053400 Salix brachista
Sabra03G0094600 Salix brachista
Sabra05G0147200 Salix brachista
SalBow6G4474 Salvia bowleyana
SalBow6G7089 Salvia bowleyana
SalBow7G1267 Salvia bowleyana
SalBow7G4056 Salvia bowleyana
SalBow8G2901 Salvia bowleyana
Sc02g0004060 Simmondsia chinensis
Sc10g0005000 Simmondsia chinensis
Sc10g0005040 Simmondsia chinensis
Sc22g0005330 Simmondsia chinensis
Sc26g0002590 Simmondsia chinensis
Sed0005878 Sechium edule
Sed0014497 Sechium edule
Sed0014664 Sechium edule
Sed0017904 Sechium edule
Sed0022827 Sechium edule
Sed0024703 Sechium edule
SEGI_15824 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35905 Striga asiatica
SGA_v2.0_scaffold19G08682 Striga asiatica
SGA_v2.0_scaffold24G10337 Striga asiatica
SGA_v2.0_scaffold48G17998 Striga asiatica
SHI09062 Sapria himalayana
Solyc01g104660.3 Solanum lycopersicum
Solyc04g071480.1 Solanum lycopersicum
Solyc08g081520.1 Solanum lycopersicum
Solyc12g056550.1 Solanum lycopersicum
Sopen01g047180 Solanum pennellii
Sopen04g027440 Solanum pennellii
Sopen08g029840 Solanum pennellii
Sopen12g029160 Solanum pennellii
Sp1g16750 Schrenkiella parvula
Sp1g32530 Schrenkiella parvula
Sp2g00760 Schrenkiella parvula
Sp5g29620 Schrenkiella parvula
Sp6g06130 Schrenkiella parvula
Sp7g21450 Schrenkiella parvula
TAR250G0001 Trochodendron aralioides
TAR250G0006 Trochodendron aralioides
TAR374G0393 Trochodendron aralioides
TAR375G0506 Trochodendron aralioides
TAR375G0756 Trochodendron aralioides
TAR625G1226 Trochodendron aralioides
THA.LOC104806860 Tarenaya hassleriana
THA.LOC104809202 Tarenaya hassleriana
THA.LOC104813026 Tarenaya hassleriana
Thecc.03G285800 Theobroma cacao
Thecc.08G153300 Theobroma cacao
Thhalv10004424m.g Eutrema salsugineum
Thhalv10010024m.g Eutrema salsugineum
Thhalv10018683m.g Eutrema salsugineum
Thhalv10023488m.g Eutrema salsugineum
Thhalv10025364m.g Eutrema salsugineum
Thhalv10028740m.g Eutrema salsugineum
TPR.G23827 Trifolium pratense
TPR.G33903 Trifolium pratense
TPR.G39399 Trifolium pratense
TWI23G0361 Tripterygium wilfordii
TWI23G1183 Tripterygium wilfordii
TWI34G1222 Tripterygium wilfordii
TWI59G1382 Tripterygium wilfordii
TWI60G0932 Tripterygium wilfordii
TWI60G1439 Tripterygium wilfordii
unitig_46.g18064 Utricularia gibba
unitig_52.g17531 Utricularia gibba
unitig_52.g17532 Utricularia gibba
unitig_61.g26272 Utricularia gibba
unitig_699.g19858 Utricularia gibba
unitig_747.g21257 Utricularia gibba
unitig_748.g7704 Utricularia gibba
unitig_88.g27625 Utricularia gibba
vmacro11404 Vaccinium macrocarpon
VMungo0251G1178 Vigna mungo
VMungo0251G1359 Vigna mungo
VMungo0464G1175 Vigna mungo
VMungo0540G0114 Vigna mungo
VMungo0720G2334 Vigna mungo
Zm00001eb091980 Zea mays
Zm00001eb139420 Zea mays
Zm00001eb202440 Zea mays
Zm00001eb229600 Zea mays
Zm00001eb407670 Zea mays

User provided reference genes

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