Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36580 Brassica napus
A02p32480 Brassica napus
A02p32490 Brassica napus
A05p32030 Brassica napus
A06p43950 Brassica napus
A06p43960 Brassica napus
A07p12420 Brassica napus
A08p31840 Brassica napus
Aa31LG1G380 Aethionema arabicum
Aa31LG2G8030 Aethionema arabicum
Aa31LG7G9310 Aethionema arabicum
Aa31LG8G4670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1123 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1077 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2487 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2489 Anthoceros agrestis
Actinidia34056 Actinidia chinensis
Actinidia34057 Actinidia chinensis
Actinidia35142 Actinidia chinensis
Actinidia38423 Actinidia chinensis
Actinidia38424 Actinidia chinensis
Actinidia38425 Actinidia chinensis
AL1G26710 Arabidopsis lyrata
AL1G40140 Arabidopsis lyrata
AL3G30950 Arabidopsis lyrata
AL5G10990 Arabidopsis lyrata
AL5G11000 Arabidopsis lyrata
Aqoxy2G03900 Aquilegia oxysepala
Aqoxy2G03901 Aquilegia oxysepala
Aqoxy3G00020 Aquilegia oxysepala
Aqoxy3G04114 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06GG2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3H9TDX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5X1RHG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DBME17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DV8NTV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.II8QNR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SL5FHN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T76UQ3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TNA30M Arachis hypogaea
AT1G14700 Arabidopsis thaliana
AT1G25230 Arabidopsis thaliana
AT2G01880 Arabidopsis thaliana
AT2G01890 Arabidopsis thaliana
AT3G17790 Arabidopsis thaliana
ATR0598G231 Amborella trichopoda
Atru.chr11.1460 Acer truncatum
Atru.chr11.1495 Acer truncatum
Atru.chr11.1496 Acer truncatum
Atru.chr11.1497 Acer truncatum
Atru.chr11.732 Acer truncatum
Atru.chr9.1606 Acer truncatum
Atru.chr9.1607 Acer truncatum
Atru.chr9.1608 Acer truncatum
AUR62000945 Chenopodium quinoa
AUR62005025 Chenopodium quinoa
BcaB03g13085 Brassica carinata
BcaB03g13086 Brassica carinata
BcaB03g14021 Brassica carinata
BcaB04g20815 Brassica carinata
BcaB07g30368 Brassica carinata
BcaC03g17088 Brassica carinata
BcaC06g31265 Brassica carinata
BcaC06g31266 Brassica carinata
BcaC06g34098 Brassica carinata
BcaC06g34099 Brassica carinata
BcaC06g34101 Brassica carinata
BcaC06g35238 Brassica carinata
BcaC07g38755 Brassica carinata
BcaC09g48740 Brassica carinata
BolC1t04601H Brassica oleracea
BolC2t11080H Brassica oleracea
BolC5t33591H Brassica oleracea
BolC7t42346H Brassica oleracea
BolC7t43788H Brassica oleracea
BolC7t43789H Brassica oleracea
BolC7t43790H Brassica oleracea
BolC8t49312H Brassica oleracea
BraA01t03722Z Brassica rapa
BraA02t08264Z Brassica rapa
BraA02t08266Z Brassica rapa
BraA05t22034Z Brassica rapa
BraA06t27271Z Brassica rapa
BraA07t29022Z Brassica rapa
BraA07t29023Z Brassica rapa
BraA08t35106Z Brassica rapa
C01p46410 Brassica napus
C02p50000 Brassica napus
C05p48550 Brassica napus
C07p18360 Brassica napus
C07p32670 Brassica napus
C07p32700 Brassica napus
C07p32720 Brassica napus
C08p16860 Brassica napus
CAN.G1612.1 Capsicum annuum
CAN.G637.34 Capsicum annuum
CAN.G65.92 Capsicum annuum
CANSAT78G0813 Cannabis sativa
CANSAT78G1805 Cannabis sativa
CANSAT78G2434 Cannabis sativa
CANSAT80G1876 Cannabis sativa
CANSAT80G2924 Cannabis sativa
CARHR015230 Cardamine hirsuta
CARHR026330 Cardamine hirsuta
CARHR093140 Cardamine hirsuta
CARHR144440 Cardamine hirsuta
CARHR144450 Cardamine hirsuta
Carub.0001s2534 Capsella rubella
Carub.0003s1750 Capsella rubella
Carub.0005s0084 Capsella rubella
Carub.0005s0086 Capsella rubella
Carub.0005s0087 Capsella rubella
Ca_11576_v3 Cicer arietinum L.
Ca_11578_v3 Cicer arietinum L.
Ca_17172_v3 Cicer arietinum L.
Ca_25971_v3 Cicer arietinum L.
Ca_26280_v3 Cicer arietinum L.
CBR_g11048 Chara braunii
CBR_g51205 Chara braunii
CBR_g6645 Chara braunii
Cc04_g09270 Coffea canephora
Cc11_g05810 Coffea canephora
Cc11_g05820 Coffea canephora
Cc11_g05830 Coffea canephora
CDE06G0300 Ceratophyllum demersum
Cfa015070 Carpinus fangiana
Cfa015071 Carpinus fangiana
Cfa020641 Carpinus fangiana
Cfa020644 Carpinus fangiana
Cfa020646 Carpinus fangiana
Cfa021095 Carpinus fangiana
Ciclev10015904m.g Citrus clementina
Ciclev10015905m.g Citrus clementina
Ciclev10024384m.g Citrus clementina
CiPaw.06G058800 Carya illinoinensis
CiPaw.06G058900 Carya illinoinensis
CiPaw.15G148200 Carya illinoinensis
CiPaw.15G148400 Carya illinoinensis
CiPaw.16G097900 Carya illinoinensis
ClCG01G006770 Citrullus lanatus
COL.COLO4_20578 Corchorus olitorius
COL.COLO4_20591 Corchorus olitorius
COL.COLO4_27588 Corchorus olitorius
Cpa.g.sc2.130 Carica papaya
Cpa.g.sc2.131 Carica papaya
Cpa.g.sc3.344 Carica papaya
Cpa.g.sc3.346 Carica papaya
Cre06.g259650 Chlamydomonas reinhardtii
CsaV3_5G027770 Cucumis sativus L.
CSS0004691 Camellia sinensis var. sinensis
CSS0005286 Camellia sinensis var. sinensis
CSS0007213 Camellia sinensis var. sinensis
CSS0032739 Camellia sinensis var. sinensis
CSS0041156 Camellia sinensis var. sinensis
CSS0042121 Camellia sinensis var. sinensis
CSS0044350 Camellia sinensis var. sinensis
CSS0049507 Camellia sinensis var. sinensis
DCAR_023545 Daucus carota
DCAR_026821 Daucus carota
Dinv09072 Davidia involucrata
Dinv09080 Davidia involucrata
Dinv11051 Davidia involucrata
Dinv11053 Davidia involucrata
Dinv14361 Davidia involucrata
Dinv14362 Davidia involucrata
Dinv14364 Davidia involucrata
Dinv14365 Davidia involucrata
Dinv20517 Davidia involucrata
Dinv20518 Davidia involucrata
Dinv20525 Davidia involucrata
Dinv20526 Davidia involucrata
Dinv37003 Davidia involucrata
Duzib084G1287 Durio zibethinus
Duzib251G0060 Durio zibethinus
Duzib251G0548 Durio zibethinus
Duzib268G0203 Durio zibethinus
Duzib268G0278 Durio zibethinus
Duzib268G0294 Durio zibethinus
ECA247G0672 Erigeron canadensis
EL10Ac4g09225 Beta vulgaris
Eucgr.B02655 Eucalyptus grandis
Eucgr.B02656 Eucalyptus grandis
Eucgr.B02657 Eucalyptus grandis
Eucgr.G02074 Eucalyptus grandis
Eucgr.H00559 Eucalyptus grandis
FAN04G2462 Fragaria x ananassa
FAN07G0200 Fragaria x ananassa
FAN07G1321 Fragaria x ananassa
FAN07G1650 Fragaria x ananassa
FAN08G0557 Fragaria x ananassa
FAN12G1053 Fragaria x ananassa
FAN12G1702 Fragaria x ananassa
FAN17G2509 Fragaria x ananassa
FAN18G1455 Fragaria x ananassa
FAN22G0062 Fragaria x ananassa
FvH4_4g33010 Fragaria vesca
FvH4_4g33011 Fragaria vesca
FvH4_4g33012 Fragaria vesca
FvH4_5g17770 Fragaria vesca
Glyma.04G128300 Glycine max
Glyma.05G138267 Glycine max
Glyma.05G138333 Glycine max
Glyma.05G138400 Glycine max
Glyma.05G247800 Glycine max
Glyma.05G247900 Glycine max
Glyma.08G056300 Glycine max
Glyma.08G056400 Glycine max
Glyma.08G093300 Glycine max
Glyma.08G093500 Glycine max
Glyma.08G093600 Glycine max
Glyma.20G011900 Glycine max
Gohir.A01G142800 Gossypium hirsutum
Gohir.A03G081901 Gossypium hirsutum
Gohir.A03G113000 Gossypium hirsutum
Gohir.A05G308100 Gossypium hirsutum
Gohir.A11G002200 Gossypium hirsutum
Gohir.A12G271250 Gossypium hirsutum
Gohir.D01G134700 Gossypium hirsutum
Gohir.D02G119700 Gossypium hirsutum
Gohir.D02G137266 Gossypium hirsutum
Gohir.D05G308700 Gossypium hirsutum
Gohir.D11G001800 Gossypium hirsutum
Gohir.D12G271800 Gossypium hirsutum
Gorai.002G166700 Gossypium raimondii
Gorai.005G134300 Gossypium raimondii
Gorai.005G153600 Gossypium raimondii
Gorai.007G002800 Gossypium raimondii
Gorai.008G292200 Gossypium raimondii
Gorai.009G328800 Gossypium raimondii
GSVIVG01011599001 Vitis vinifera
HanXRQChr08g0223981 Helianthus annuus
HanXRQChr08g0225081 Helianthus annuus
HanXRQChr08g0225101 Helianthus annuus
HanXRQChr12g0379361 Helianthus annuus
HanXRQChr15g0471751 Helianthus annuus
HanXRQChr15g0471761 Helianthus annuus
Haze_10817 Corylus avellana
Haze_10818 Corylus avellana
Haze_18926 Corylus avellana
Haze_18928 Corylus avellana
Hma1.2p1_0095F.1_g047570 Hydrangea macrophylla
Hma1.2p1_0460F.1_g157500 Hydrangea macrophylla
Hma1.2p1_1525F.1_g288920 Hydrangea macrophylla
Hma1.2p1_1525F.1_g288930 Hydrangea macrophylla
HPP92_002288 Vanilla planifolia
HPP92_017222 Vanilla planifolia
Hund07003 Selenicereus undatus
Lalb_Chr04g0258761 Lupinus albus
Lalb_Chr05g0221491 Lupinus albus
Lalb_Chr07g0187851 Lupinus albus
Lalb_Chr13g0293371 Lupinus albus
Lalb_Chr13g0293561 Lupinus albus
Lalb_Chr13g0293581 Lupinus albus
Lalb_Chr13g0293591 Lupinus albus
Lalb_Chr13g0293601 Lupinus albus
Lalb_Chr13g0293611 Lupinus albus
Lalb_Chr13g0293621 Lupinus albus
Lj2g0025751 Lotus japonicus
Lj4g0002500 Lotus japonicus
Lj4g0016061 Lotus japonicus
Lj4g0019459 Lotus japonicus
Lj6A731T89 Lonicera japonica
Lj6A732G66 Lonicera japonica
Lj6C732T1 Lonicera japonica
LjContig00484g0016983 Lotus japonicus
Lsat_1_v5_gn_1_109681 Lactuca sativa
Lsat_1_v5_gn_3_103780 Lactuca sativa
Lsat_1_v5_gn_8_34720 Lactuca sativa
Manes.14G173500 Manihot esculenta
Manes.15G138100 Manihot esculenta
Manes.15G138200 Manihot esculenta
Manes.15G138300 Manihot esculenta
Manes.17G087500 Manihot esculenta
Manes.17G087600 Manihot esculenta
Manes.17G087700 Manihot esculenta
Manes.17G087801 Manihot esculenta
Manes.17G087900 Manihot esculenta
Manes.17G088600 Manihot esculenta
Manes.17G088700 Manihot esculenta
Manes.17G089000 Manihot esculenta
Manes.17G089010 Manihot esculenta
Manes.17G089030 Manihot esculenta
Manes.17G089040 Manihot esculenta
Manes.17G089080 Manihot esculenta
Manes.17G089100 Manihot esculenta
Mapoly0029s0107 Marchantia polymorpha
Mapoly0050s0071 Marchantia polymorpha
Mapoly0115s0017 Marchantia polymorpha
MBI19_g25222_MAGBIO Magnolia biondii
MCO07G093 Micromonas commoda
MCO11G492 Micromonas commoda
MD06G1233400 Malus domestica
MD06G1233500 Malus domestica
MD13G1016000 Malus domestica
MD13G1016100 Malus domestica
MD14G1240200 Malus domestica
MD14G1240300 Malus domestica
MD16G1013500 Malus domestica
MD16G1013600 Malus domestica
Medtr0200s0050 Medicago truncatula
Medtr6g071695 Medicago truncatula
Medtr8g107620 Medicago truncatula
MELO3C005243.2 Cucumis melo
Migut.D01209 Erythranthe guttata
Migut.D01212 Erythranthe guttata
Migut.I00578 Erythranthe guttata
Migut.I00581 Erythranthe guttata
Migut.I00582 Erythranthe guttata
Migut.L00224 Erythranthe guttata
Migut.L00608 Erythranthe guttata
MSTRG.11240 Avicennia marina
MSTRG.22863 Avicennia marina
MSTRG.9358 Avicennia marina
Nitab4.5_0000033g0240 Nicotiana tabacum
Nitab4.5_0000430g0050 Nicotiana tabacum
Nitab4.5_0000926g0100 Nicotiana tabacum
Nitab4.5_0000926g0140 Nicotiana tabacum
Nitab4.5_0003309g0070 Nicotiana tabacum
Nitab4.5_0006558g0020 Nicotiana tabacum
Nitab4.5_0006558g0040 Nicotiana tabacum
Nitab4.5_0012213g0040 Nicotiana tabacum
Nn3g18454 Nelumbo nucifera
Nn4g24505 Nelumbo nucifera
Nn4g24506 Nelumbo nucifera
Nn4g24507 Nelumbo nucifera
Nn4g24511 Nelumbo nucifera
Oeu006309.1 Olea europaea
Oeu007938.1 Olea europaea
Oeu043976.1 Olea europaea
Os03g0238600 Oryza sativa ssp. japonica
Os10g0116800 Oryza sativa ssp. japonica
Os11g0549615 Oryza sativa ssp. japonica
Os11g0549620 Oryza sativa ssp. japonica
Peaxi162Scf00171g00924 Petunia axillaris
Peaxi162Scf00337g00039 Petunia axillaris
Peaxi162Scf00337g00313 Petunia axillaris
Peaxi162Scf01064g00026 Petunia axillaris
PGR044G1613 Punica granatum
PGR083G1034 Punica granatum
PGR083G1774 Punica granatum
PGR142G3930 Punica granatum
PGSC0003DMG400026949 Solanum tuberosum
PGSC0003DMG400029500 Solanum tuberosum
PGSC0003DMG400033688 Solanum tuberosum
Phvul.002G181300 Phaseolus vulgaris
Phvul.002G181500 Phaseolus vulgaris
Phvul.002G332000 Phaseolus vulgaris
Phvul.002G332100 Phaseolus vulgaris
Phvul.003G014000 Phaseolus vulgaris
Potri.008G139100 Populus trichocarpa
Potri.010G101900 Populus trichocarpa
Potri.012G042200 Populus trichocarpa
Potri.015G031300 Populus trichocarpa
Potri.015G031400 Populus trichocarpa
Pp3c11_15600 Physcomitrium patens
Pp3c1_13870 Physcomitrium patens
Pp3c7_9800 Physcomitrium patens
PRCOL_00003763 Prasinoderma coloniale
Prupe.1G337500 Prunus persica
Prupe.1G337600 Prunus persica
Prupe.1G337700 Prunus persica
Prupe.5G237800 Prunus persica
Prupe.5G237900 Prunus persica
Psat0s2674g0080 Pisum sativum
Psat0s982g0080 Pisum sativum
Psat0ss1279g0360 Pisum sativum
Psat1g094400 Pisum sativum
Psat1g124280 Pisum sativum
Psat1g124320 Pisum sativum
Psat2g137600 Pisum sativum
Psat5g187560 Pisum sativum
Psat7g000720 Pisum sativum
Psat7g084200 Pisum sativum
Psat7g084280 Pisum sativum
Psat7g178720 Pisum sativum
Psat7g231800 Pisum sativum
Psat7g231840 Pisum sativum
PSO210G1795 Papaver somniferum
PSO210G7620 Papaver somniferum
PSO832G1926 Papaver somniferum
PSO832G3252 Papaver somniferum
PSO832G3862 Papaver somniferum
QL03p039001 Quercus lobata
QL03p039011 Quercus lobata
QL03p039047 Quercus lobata
QL03p039055 Quercus lobata
QL10p031803 Quercus lobata
QL10p031827 Quercus lobata
RcHm_v2.0_Chr4g0442041 Rosa chinensis
RcHm_v2.0_Chr4g0442051 Rosa chinensis
RcHm_v2.0_Chr4g0442061 Rosa chinensis
RcHm_v2.0_Chr4g0442071 Rosa chinensis
RcHm_v2.0_Chr7g0177841 Rosa chinensis
RcHm_v2.0_Chr7g0177851 Rosa chinensis
Rhsim04G0169600 Rhododendron simsii
Rhsim04G0169700 Rhododendron simsii
Sabra08G0105700 Salix brachista
Sabra11G0012400 Salix brachista
Sabra11G0012700 Salix brachista
Sabra12G0029500 Salix brachista
Sabra15G0026200 Salix brachista
SabraUnG0006400 Salix brachista
SalBow1G3715 Salvia bowleyana
SalBow5G3718 Salvia bowleyana
SalBow5G4533 Salvia bowleyana
SalBow7G1444 Salvia bowleyana
SalBow7G2862 Salvia bowleyana
SalBow7G4730 Salvia bowleyana
Sc06g0003560 Simmondsia chinensis
Sc06g0003590 Simmondsia chinensis
Sed0021267 Sechium edule
Sed0027788 Sechium edule
SEGI_06936 Sequoiadendron giganteum
SEGI_10719 Sequoiadendron giganteum
SEGI_19910 Sequoiadendron giganteum
SEGI_20277 Sequoiadendron giganteum
SEGI_28440 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15647 Striga asiatica
SGA_v2.0_scaffold72G24115 Striga asiatica
SGA_v2.0_scaffold72G24118 Striga asiatica
SGA_v2.0_scaffold72G24119 Striga asiatica
SMO118G0040 Selaginella moellendorffii
SMO147G0172 Selaginella moellendorffii
Solyc03g098010.3 Solanum lycopersicum
Solyc04g008245.1 Solanum lycopersicum
Solyc04g008260.3 Solanum lycopersicum
Solyc06g072420.3 Solanum lycopersicum
Sopen03g028720 Solanum pennellii
Sopen04g003370 Solanum pennellii
Sopen04g003380 Solanum pennellii
Sopen06g028790 Solanum pennellii
Sp1g13130 Schrenkiella parvula
Sp1g23060 Schrenkiella parvula
Sp2g13300 Schrenkiella parvula
Sp2g13310 Schrenkiella parvula
Sp3g15910 Schrenkiella parvula
TAR622G0211 Trochodendron aralioides
TAR622G0761 Trochodendron aralioides
TAR629G0549 Trochodendron aralioides
TAR629G3035 Trochodendron aralioides
TAR629G3301 Trochodendron aralioides
THA.LOC104805098 Tarenaya hassleriana
THA.LOC104809823 Tarenaya hassleriana
THA.LOC104821907 Tarenaya hassleriana
THA.LOC104823531 Tarenaya hassleriana
THA.LOC104823540 Tarenaya hassleriana
Thecc.02G304300 Theobroma cacao
Thecc.02G304500 Theobroma cacao
Thecc.02G304600 Theobroma cacao
Thecc.03G063400 Theobroma cacao
Thecc.03G063900 Theobroma cacao
Thhalv10004555m.g Eutrema salsugineum
Thhalv10004597m.g Eutrema salsugineum
Thhalv10008145m.g Eutrema salsugineum
Thhalv10008148m.g Eutrema salsugineum
Thhalv10021109m.g Eutrema salsugineum
TPR.G1411 Trifolium pratense
TPR.G31709 Trifolium pratense
TPR.G37184 Trifolium pratense
TPR.G5118 Trifolium pratense
TPR.G5136 Trifolium pratense
TWI74G0552 Tripterygium wilfordii
TWI74G1442 Tripterygium wilfordii
TWI77G0872 Tripterygium wilfordii
TWI81G0319 Tripterygium wilfordii
unitig_27.g25078 Utricularia gibba
unitig_62.g23812 Utricularia gibba
unitig_8.g3038 Utricularia gibba
vmacro08579 Vaccinium macrocarpon
vmacro08580 Vaccinium macrocarpon
VMungo0251G0435 Vigna mungo
VMungo0251G1235 Vigna mungo
VMungo0251G2372 Vigna mungo
VMungo0251G2585 Vigna mungo
VMungo0251G3201 Vigna mungo
Zm00001eb010130 Zea mays
Zm00001eb010140 Zea mays
Zm00001eb053560 Zea mays
Zm00001eb085600 Zea mays
Zm00001eb201680 Zea mays
Zm00001eb244670 Zea mays
Zm00001eb270880 Zea mays
Zm00001eb294060 Zea mays
Zm00001eb294070 Zea mays

User provided reference genes

Program Settings