Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33040 Brassica napus
A05p31490 Brassica napus
A05p45240 Brassica napus
A09p23240 Brassica napus
A09p61600 Brassica napus
Aa31LG1G50 Aethionema arabicum
Aa31LG2G8710 Aethionema arabicum
Aa31LG5G13100 Aethionema arabicum
Aa31LG8G5070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3278 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3875 Anthoceros agrestis
Actinidia02650 Actinidia chinensis
Actinidia13198 Actinidia chinensis
Actinidia14927 Actinidia chinensis
Actinidia14928 Actinidia chinensis
Actinidia16024 Actinidia chinensis
Actinidia16692 Actinidia chinensis
Actinidia36343 Actinidia chinensis
Actinidia38360 Actinidia chinensis
Actinidia38363 Actinidia chinensis
Ah.02g128200 Amaranthus hybridus
Ah.03g138390 Amaranthus hybridus
AL1G27140 Arabidopsis lyrata
AL3G11980 Arabidopsis lyrata
AL3G31450 Arabidopsis lyrata
AL5G10130 Arabidopsis lyrata
Aqoxy2G02173 Aquilegia oxysepala
Aqoxy3G00190 Aquilegia oxysepala
Aqoxy3G00191 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.74UU32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8D4F6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C41ANZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ELL9VR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GGAH0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2JG0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6XSXZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAU2KF Arachis hypogaea
AT1G15080 Arabidopsis thaliana
AT2G01180 Arabidopsis thaliana
AT3G02600 Arabidopsis thaliana
AT3G18220 Arabidopsis thaliana
ATR0681G165 Amborella trichopoda
Atru.chr1.1610 Acer truncatum
Atru.chr11.249 Acer truncatum
Atru.chr11.251 Acer truncatum
Atru.chr11.255 Acer truncatum
Atru.chr11.257 Acer truncatum
Atru.chr11.262 Acer truncatum
Atru.chr11.282 Acer truncatum
AUR62002799 Chenopodium quinoa
AUR62002802 Chenopodium quinoa
AUR62014106 Chenopodium quinoa
AUR62014108 Chenopodium quinoa
BcaB04g18351 Brassica carinata
BcaB04g19395 Brassica carinata
BcaB04g20784 Brassica carinata
BcaB07g30755 Brassica carinata
BcaB07g30756 Brassica carinata
BcaC01g04432 Brassica carinata
BcaC01g04433 Brassica carinata
BcaC01g04434 Brassica carinata
BcaC01g06240 Brassica carinata
BcaC04g21598 Brassica carinata
BcaC05g28650 Brassica carinata
BcaC05g30364 Brassica carinata
BcaC06g31327 Brassica carinata
BcaC06g34127 Brassica carinata
BcaC06g34211 Brassica carinata
BcaNung05770 Brassica carinata
BolC3t16287H Brassica oleracea
BolC5t33493H Brassica oleracea
BolC5t35078H Brassica oleracea
BolC7t41199H Brassica oleracea
BolC7t42198H Brassica oleracea
BolC7t43702H Brassica oleracea
BolC8t47949H Brassica oleracea
BolC8t52066H Brassica oleracea
BolC9t54574H Brassica oleracea
BolC9t55863H Brassica oleracea
BolC9t57898H Brassica oleracea
BraA01t03689Z Brassica rapa
BraA03t12474Z Brassica rapa
BraA05t21986Z Brassica rapa
BraA05t23137Z Brassica rapa
BraA06t27333Z Brassica rapa
BraA09t37928Z Brassica rapa
BraA09t41532Z Brassica rapa
C03p17770 Brassica napus
C03p40220 Brassica napus
C05p47800 Brassica napus
C07p07810 Brassica napus
C07p16920 Brassica napus
C08p45180 Brassica napus
C09p16730 Brassica napus
C09p29990 Brassica napus
C09p75760 Brassica napus
CAN.G610.18 Capsicum annuum
CAN.G610.19 Capsicum annuum
CAN.G610.20 Capsicum annuum
CAN.G622.10 Capsicum annuum
CAN.G625.58 Capsicum annuum
CAN.G7.2 Capsicum annuum
CANSAT01G0238 Cannabis sativa
CANSAT01G0346 Cannabis sativa
CANSAT56G3846 Cannabis sativa
CARHR015610 Cardamine hirsuta
CARHR076620 Cardamine hirsuta
CARHR093570 Cardamine hirsuta
CARHR143720 Cardamine hirsuta
Carub.0001s1484 Capsella rubella
Carub.0003s0172 Capsella rubella
Carub.0003s1798 Capsella rubella
Carub.0005s0015 Capsella rubella
Ca_06895_v3 Cicer arietinum L.
Ca_08092_v3 Cicer arietinum L.
Ca_14992_v3 Cicer arietinum L.
CBR_g54964 Chara braunii
CBR_g5695 Chara braunii
Cc04_g06800 Coffea canephora
Cc07_g08510 Coffea canephora
Cc11_g09590 Coffea canephora
Cc11_g09600 Coffea canephora
CDE02G0009 Ceratophyllum demersum
CDE02G1195 Ceratophyllum demersum
CDE02G4392 Ceratophyllum demersum
CDE05G3260 Ceratophyllum demersum
CDE08G0746 Ceratophyllum demersum
CDE11G0314 Ceratophyllum demersum
Cfa007889 Carpinus fangiana
Cfa015830 Carpinus fangiana
Cfa024989 Carpinus fangiana
Ciclev10013611m.g Citrus clementina
Ciclev10015826m.g Citrus clementina
Ciclev10015936m.g Citrus clementina
CiPaw.03G065000 Carya illinoinensis
CiPaw.05G243100 Carya illinoinensis
CiPaw.05G243200 Carya illinoinensis
CiPaw.06G016100 Carya illinoinensis
CiPaw.06G016200 Carya illinoinensis
ClCG05G022430 Citrullus lanatus
ClCG07G016420 Citrullus lanatus
ClCG11G007660 Citrullus lanatus
COL.COLO4_09378 Corchorus olitorius
COL.COLO4_32107 Corchorus olitorius
COL.COLO4_32115 Corchorus olitorius
Cpa.g.sc170.25 Carica papaya
Cpa.g.sc3.455 Carica papaya
Cpa.g.sc314.1 Carica papaya
Cpa.g.sc314.2 Carica papaya
Cre05.g230900 Chlamydomonas reinhardtii
Cre05.g240000 Chlamydomonas reinhardtii
Cre14.g628752 Chlamydomonas reinhardtii
CsaV3_2G033910 Cucumis sativus L.
CsaV3_4G010400 Cucumis sativus L.
CsaV3_5G034650 Cucumis sativus L.
CsaV3_5G034660 Cucumis sativus L.
CSS0003839 Camellia sinensis var. sinensis
CSS0007465 Camellia sinensis var. sinensis
CSS0029029 Camellia sinensis var. sinensis
CSS0040989 Camellia sinensis var. sinensis
CSS0041384 Camellia sinensis var. sinensis
DCAR_005127 Daucus carota
DCAR_007832 Daucus carota
DCAR_010566 Daucus carota
DCAR_017378 Daucus carota
Dinv16144 Davidia involucrata
Dinv16145 Davidia involucrata
Dinv17519 Davidia involucrata
Dinv31585 Davidia involucrata
Dinv31586 Davidia involucrata
Dinv33966 Davidia involucrata
Duzib133G1188 Durio zibethinus
Duzib205G1977 Durio zibethinus
Duzib251G0086 Durio zibethinus
Duzib268G1704 Durio zibethinus
Duzib268G1748 Durio zibethinus
ECA232G0564 Erigeron canadensis
ECA232G1441 Erigeron canadensis
ECA233G2002 Erigeron canadensis
ECA238G3855 Erigeron canadensis
EL10Ac6g14291 Beta vulgaris
EL10Ac6g14292 Beta vulgaris
Eucgr.B00838 Eucalyptus grandis
Eucgr.B00840 Eucalyptus grandis
Eucgr.B00841 Eucalyptus grandis
Eucgr.B02855 Eucalyptus grandis
Eucgr.B02856 Eucalyptus grandis
Eucgr.G02233 Eucalyptus grandis
Eucgr.J01522 Eucalyptus grandis
Eucgr.J01523 Eucalyptus grandis
FAN04G0967 Fragaria x ananassa
FAN07G1652 Fragaria x ananassa
FAN08G0282 Fragaria x ananassa
FAN12G0102 Fragaria x ananassa
FAN12G2400 Fragaria x ananassa
FAN17G2789 Fragaria x ananassa
FAN18G4006 Fragaria x ananassa
FAN22G0190 Fragaria x ananassa
FvH4_4g26640 Fragaria vesca
FvH4_4g26641 Fragaria vesca
FvH4_5g16740 Fragaria vesca
Glyma.02G089100 Glycine max
Glyma.08G262600 Glycine max
Glyma.09G115800 Glycine max
Glyma.10G270000 Glycine max
Glyma.10G270100 Glycine max
Glyma.11G165300 Glycine max
Glyma.18G058400 Glycine max
Glyma.18G293800 Glycine max
Glyma.20G121200 Glycine max
Glyma.20G121300 Glycine max
Gohir.A05G315100 Gossypium hirsutum
Gohir.A05G315200 Gossypium hirsutum
Gohir.A07G074700 Gossypium hirsutum
Gohir.A11G006500 Gossypium hirsutum
Gohir.D05G316600 Gossypium hirsutum
Gohir.D05G316700 Gossypium hirsutum
Gohir.D07G079400 Gossypium hirsutum
Gohir.D11G005600 Gossypium hirsutum
Gorai.001G084000 Gossypium raimondii
Gorai.007G006800 Gossypium raimondii
Gorai.009G338800 Gossypium raimondii
Gorai.009G338900 Gossypium raimondii
GSVIVG01008347001 Vitis vinifera
GSVIVG01011828001 Vitis vinifera
GSVIVG01011829001 Vitis vinifera
GSVIVG01011832001 Vitis vinifera
GSVIVG01030973001 Vitis vinifera
HanXRQChr07g0190611 Helianthus annuus
HanXRQChr08g0213221 Helianthus annuus
HanXRQChr11g0325181 Helianthus annuus
HanXRQChr16g0513061 Helianthus annuus
HanXRQChr16g0529201 Helianthus annuus
HanXRQChr17g0556661 Helianthus annuus
Haze_00660 Corylus avellana
Haze_00661 Corylus avellana
Haze_14187 Corylus avellana
Hma1.2p1_0767F.1_g215480 Hydrangea macrophylla
Hma1.2p1_0767F.1_g215500 Hydrangea macrophylla
HPP92_008044 Vanilla planifolia
HPP92_024320 Vanilla planifolia
Hund20738 Selenicereus undatus
Hund20739 Selenicereus undatus
Lalb_Chr02g0145721 Lupinus albus
Lalb_Chr04g0257651 Lupinus albus
Lalb_Chr06g0165821 Lupinus albus
Lalb_Chr10g0091461 Lupinus albus
Lalb_Chr10g0104361 Lupinus albus
Lalb_Chr21g0308701 Lupinus albus
Lj1g0022492 Lotus japonicus
Lj2A438T60 Lonicera japonica
Lj2g0006406 Lotus japonicus
Lj3C879T8 Lonicera japonica
Lj5A153T50 Lonicera japonica
Lj5g0007455 Lotus japonicus
Lj5g0010345 Lotus japonicus
Lj6A752T41 Lonicera japonica
Lj6C752T9 Lonicera japonica
Lj6g0001917 Lotus japonicus
Lsat_1_v5_gn_0_21401 Lactuca sativa
Lsat_1_v5_gn_1_82261 Lactuca sativa
Lsat_1_v5_gn_2_80941 Lactuca sativa
Lsat_1_v5_gn_3_62240 Lactuca sativa
Lsat_1_v5_gn_4_14740 Lactuca sativa
Lsat_1_v5_gn_4_155521 Lactuca sativa
Lsat_1_v5_gn_5_2161 Lactuca sativa
Lsat_1_v5_gn_8_42381 Lactuca sativa
Manes.01G015500 Manihot esculenta
Manes.02G071800 Manihot esculenta
Manes.06G064400 Manihot esculenta
Manes.14G107600 Manihot esculenta
Manes.14G107700 Manihot esculenta
Mapoly0144s0019 Marchantia polymorpha
Mapoly0216s0003 Marchantia polymorpha
MBI09_g40286_MAGBIO Magnolia biondii
MBI16_g06258_MAGBIO Magnolia biondii
MCO09G041 Micromonas commoda
MCO12G180 Micromonas commoda
MD06G1221300 Malus domestica
MD09G1256800 Malus domestica
MD13G1034700 Malus domestica
MD13G1034800 Malus domestica
MD14G1230500 Malus domestica
MD16G1036400 Malus domestica
MD16G1036500 Malus domestica
MD17G1250400 Malus domestica
Medtr1g109400 Medicago truncatula
Medtr1g109430 Medicago truncatula
Medtr3g031780 Medicago truncatula
Medtr5g005730 Medicago truncatula
Medtr7g082670 Medicago truncatula
MELO3C008163.2 Cucumis melo
MELO3C010388.2 Cucumis melo
MELO3C012279.2 Cucumis melo
MELO3C012280.2 Cucumis melo
Migut.D01600 Erythranthe guttata
Migut.E00378 Erythranthe guttata
Migut.L00499 Erythranthe guttata
Migut.L00674 Erythranthe guttata
Migut.L00675 Erythranthe guttata
Migut.L01004 Erythranthe guttata
Migut.L01005 Erythranthe guttata
MSTRG.15306 Avicennia marina
MSTRG.2212 Avicennia marina
MSTRG.3545 Avicennia marina
MSTRG.7637 Avicennia marina
MSTRG.866 Avicennia marina
Nitab4.5_0000031g0480 Nicotiana tabacum
Nitab4.5_0000694g0080 Nicotiana tabacum
Nitab4.5_0000694g0180 Nicotiana tabacum
Nitab4.5_0000753g0180 Nicotiana tabacum
Nitab4.5_0002112g0160 Nicotiana tabacum
Nitab4.5_0002112g0170 Nicotiana tabacum
Nitab4.5_0006332g0040 Nicotiana tabacum
Nitab4.5_0008243g0020 Nicotiana tabacum
Nn3g17964 Nelumbo nucifera
Nn3g17965 Nelumbo nucifera
Nn3g17966 Nelumbo nucifera
Nn4g23968 Nelumbo nucifera
Nn4g23969 Nelumbo nucifera
Oeu000992.1 Olea europaea
Oeu007190.2 Olea europaea
Oeu007191.1 Olea europaea
Oeu036846.1 Olea europaea
Oeu048375.1 Olea europaea
Oeu050387.1 Olea europaea
Oeu053809.1 Olea europaea
Oeu057763.2 Olea europaea
Os01g0139600 Oryza sativa ssp. japonica
Os01g0666000 Oryza sativa ssp. japonica
Os01g0693300 Oryza sativa ssp. japonica
Os05g0549900 Oryza sativa ssp. japonica
Os08g0359100 Oryza sativa ssp. japonica
Os08g0359200 Oryza sativa ssp. japonica
Os09g0308900 Oryza sativa ssp. japonica
Peaxi162Scf00012g00141 Petunia axillaris
Peaxi162Scf00877g00125 Petunia axillaris
Peaxi162Scf01853g00014 Petunia axillaris
PGR042G0807 Punica granatum
PGR083G1458 Punica granatum
PGR102G3341 Punica granatum
PGR119G0299 Punica granatum
PGSC0003DMG400009741 Solanum tuberosum
PGSC0003DMG400030528 Solanum tuberosum
PGSC0003DMG400030590 Solanum tuberosum
PGSC0003DMG400031435 Solanum tuberosum
PGSC0003DMG401030570 Solanum tuberosum
PGSC0003DMG402030570 Solanum tuberosum
Phvul.003G031400 Phaseolus vulgaris
Phvul.006G072700 Phaseolus vulgaris
Phvul.007G032600 Phaseolus vulgaris
Phvul.007G032700 Phaseolus vulgaris
Phvul.008G008500 Phaseolus vulgaris
Potri.004G095400 Populus trichocarpa
Potri.008G124900 Populus trichocarpa
Potri.010G119300 Populus trichocarpa
Potri.010G119400 Populus trichocarpa
Potri.017G119500 Populus trichocarpa
Pp3c10_24580 Physcomitrium patens
Pp3c16_21270 Physcomitrium patens
Pp3c23_13390 Physcomitrium patens
Pp3c23_14820 Physcomitrium patens
Pp3c24_2640 Physcomitrium patens
Pp3c2_1520 Physcomitrium patens
PRCOL_00001256 Prasinoderma coloniale
PRCOL_00002562 Prasinoderma coloniale
Prupe.1G317400 Prunus persica
Prupe.1G317500 Prunus persica
Prupe.3G148800 Prunus persica
Prupe.5G225500 Prunus persica
Psat3g097760 Pisum sativum
Psat5g153960 Pisum sativum
Psat6g223680 Pisum sativum
Psat6g224040 Pisum sativum
PSO017G2095 Papaver somniferum
PSO017G5896 Papaver somniferum
PSO017G6245 Papaver somniferum
PSO170G2198 Papaver somniferum
PSO478G3321 Papaver somniferum
PSO541G4995 Papaver somniferum
PSO675G7900 Papaver somniferum
QL01p003442 Quercus lobata
QL01p003456 Quercus lobata
QL01p003463 Quercus lobata
QL02p050238 Quercus lobata
QL10p026844 Quercus lobata
RcHm_v2.0_Chr4g0434321 Rosa chinensis
RcHm_v2.0_Chr4g0434331 Rosa chinensis
RcHm_v2.0_Chr4g0434341 Rosa chinensis
RcHm_v2.0_Chr7g0179351 Rosa chinensis
Rhsim09G0103300 Rhododendron simsii
Rhsim10G0072900 Rhododendron simsii
Rhsim10G0073100 Rhododendron simsii
Rhsim12G0086400 Rhododendron simsii
Rhsim12G0086500 Rhododendron simsii
Sabra01G0060200 Salix brachista
Sabra08G0080500 Salix brachista
Sabra08G0094300 Salix brachista
Sabra10G0089700 Salix brachista
Sabra11G0008500 Salix brachista
Sabra11G0010900 Salix brachista
Sabra11G0011600 Salix brachista
Sabra16G0112600 Salix brachista
Sabra17G0098600 Salix brachista
Sabra18G0061200 Salix brachista
SalBow1G0327 Salvia bowleyana
SalBow5G2550 Salvia bowleyana
SalBow5G2810 Salvia bowleyana
SalBow8G0644 Salvia bowleyana
SalBow8G1967 Salvia bowleyana
SalBow8G4098 Salvia bowleyana
Sc14g0007290 Simmondsia chinensis
Sed0000232 Sechium edule
Sed0001881 Sechium edule
Sed0003487 Sechium edule
Sed0018518 Sechium edule
Sed0025874 Sechium edule
SEGI_04731 Sequoiadendron giganteum
SEGI_24374 Sequoiadendron giganteum
SEGI_39492 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06915 Striga asiatica
SGA_v2.0_scaffold36G14565 Striga asiatica
SGA_v2.0_scaffold38G15020 Striga asiatica
SMO196G0085 Selaginella moellendorffii
SMO351G0185 Selaginella moellendorffii
SMO358G0614 Selaginella moellendorffii
Solyc02g086370.4 Solanum lycopersicum
Solyc04g025370.3 Solanum lycopersicum
Solyc04g025400.3 Solanum lycopersicum
Solyc05g008800.4 Solanum lycopersicum
Solyc05g008810.4 Solanum lycopersicum
Solyc05g008820.4 Solanum lycopersicum
Sopen02g031030 Solanum pennellii
Sopen04g012270 Solanum pennellii
Sopen05g004560 Solanum pennellii
Sopen05g004570 Solanum pennellii
Sopen05g004580 Solanum pennellii
Sp2g12640 Schrenkiella parvula
Sp3g01640 Schrenkiella parvula
Sp3g16340 Schrenkiella parvula
TAR371G0983 Trochodendron aralioides
TAR371G1288 Trochodendron aralioides
TAR622G0605 Trochodendron aralioides
TAR629G0145 Trochodendron aralioides
THA.LOC104820378 Tarenaya hassleriana
THA.LOC104820937 Tarenaya hassleriana
THA.LOC104823983 Tarenaya hassleriana
THA.LOC104824156 Tarenaya hassleriana
THA.LOC104827164 Tarenaya hassleriana
Thecc.02G220800 Theobroma cacao
Thecc.02G220900 Theobroma cacao
Thecc.03G043400 Theobroma cacao
Thecc.04G128500 Theobroma cacao
Thhalv10000962m.g Eutrema salsugineum
Thhalv10008246m.g Eutrema salsugineum
Thhalv10020998m.g Eutrema salsugineum
Thhalv10021929m.g Eutrema salsugineum
TPR.G16535 Trifolium pratense
TPR.G32923 Trifolium pratense
TPR.G4883 Trifolium pratense
TPR.G4901 Trifolium pratense
TWI15G0750 Tripterygium wilfordii
TWI31G0052 Tripterygium wilfordii
TWI31G1282 Tripterygium wilfordii
TWI53G0596 Tripterygium wilfordii
TWI60G1086 Tripterygium wilfordii
TWI79G1624 Tripterygium wilfordii
unitig_21.g20022 Utricularia gibba
unitig_46.g18670 Utricularia gibba
unitig_578.g16742 Utricularia gibba
vmacro01407 Vaccinium macrocarpon
vmacro05486 Vaccinium macrocarpon
vmacro10608 Vaccinium macrocarpon
vmacro22956 Vaccinium macrocarpon
VMungo0540G0156 Vigna mungo
VMungo0720G1981 Vigna mungo
VMungo1215G2368 Vigna mungo
VMungo1383G2208 Vigna mungo
Zm00001eb005480 Zea mays
Zm00001eb042920 Zea mays
Zm00001eb097940 Zea mays
Zm00001eb157460 Zea mays
Zm00001eb294840 Zea mays
Zm00001eb309560 Zea mays
Zm00001eb335600 Zea mays
Zm00001eb360740 Zea mays

User provided reference genes

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