Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17780 Brassica napus
A02p35160 Brassica napus
A04p13930 Brassica napus
A06p41420 Brassica napus
A08p00280 Brassica napus
A09p03420 Brassica napus
A09p23640 Brassica napus
A10p13230 Brassica napus
Aa31LG10G380 Aethionema arabicum
Aa31LG1G13610 Aethionema arabicum
Aa31LG2G5180 Aethionema arabicum
Aa31LG2G5200 Aethionema arabicum
Aa31LG3G11940 Aethionema arabicum
Aa31LG9G14220 Aethionema arabicum
Aa31LG9G15530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.697 Anthoceros agrestis
Actinidia00840 Actinidia chinensis
Actinidia00841 Actinidia chinensis
Actinidia03657 Actinidia chinensis
Actinidia05912 Actinidia chinensis
Actinidia05974 Actinidia chinensis
Actinidia13021 Actinidia chinensis
Actinidia15957 Actinidia chinensis
Actinidia27587 Actinidia chinensis
Actinidia36189 Actinidia chinensis
Ah.00g001160 Amaranthus hybridus
AL1G63930 Arabidopsis lyrata
AL5G16310 Arabidopsis lyrata
AL5G16850 Arabidopsis lyrata
AL7G26410 Arabidopsis lyrata
AL7G48700 Arabidopsis lyrata
Aqoxy4G02309 Aquilegia oxysepala
Aqoxy5G03713 Aquilegia oxysepala
Aqoxy7G00121 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15MU7G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3QB15W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4C5S2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56Z8NU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5C0RMJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7GP1JW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D0J2JD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L06CU6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9D9S7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YU8K39 Arachis hypogaea
AT1G55810 Arabidopsis thaliana
AT3G27190 Arabidopsis thaliana
AT3G27440 Arabidopsis thaliana
AT4G26510 Arabidopsis thaliana
AT5G40870 Arabidopsis thaliana
ATR0122G008 Amborella trichopoda
ATR0561G129 Amborella trichopoda
ATR0751G215 Amborella trichopoda
Atru.chr2.3755 Acer truncatum
Atru.chr2.3775 Acer truncatum
Atru.chr6.2437 Acer truncatum
Atru.chr6.2538 Acer truncatum
AUR62017160 Chenopodium quinoa
AUR62018230 Chenopodium quinoa
AUR62037771 Chenopodium quinoa
BcaB02g10269 Brassica carinata
BcaB04g19439 Brassica carinata
BcaB06g27570 Brassica carinata
BcaB07g30183 Brassica carinata
BcaB08g35969 Brassica carinata
BcaC02g08996 Brassica carinata
BcaC03g17431 Brassica carinata
BcaC04g20164 Brassica carinata
BcaC04g20165 Brassica carinata
BcaC04g23902 Brassica carinata
BcaC05g26172 Brassica carinata
BcaC06g33845 Brassica carinata
BcaC06g33848 Brassica carinata
BcaC09g50718 Brassica carinata
BcaNung02407 Brassica carinata
BcaNung06418 Brassica carinata
BolC1t02181H Brassica oleracea
BolC2t11448H Brassica oleracea
BolC3t18049H Brassica oleracea
BolC3t21622H Brassica oleracea
BolC4t26371H Brassica oleracea
BolC7t44138H Brassica oleracea
BolC9t53282H Brassica oleracea
BolC9t57566H Brassica oleracea
BolC9t59275H Brassica oleracea
BraA01t01733Z Brassica rapa
BraA02t08523Z Brassica rapa
BraA04t17058Z Brassica rapa
BraA06t27068Z Brassica rapa
BraA08t32085Z Brassica rapa
BraA09t35980Z Brassica rapa
BraA10t43421Z Brassica rapa
C01p22500 Brassica napus
C02p21650 Brassica napus
C02p53810 Brassica napus
C03p47560 Brassica napus
C03p57750 Brassica napus
C03p93240 Brassica napus
C04p47710 Brassica napus
C05p16430 Brassica napus
C07p36220 Brassica napus
C09p03630 Brassica napus
C09p47120 Brassica napus
C09p64380 Brassica napus
CAN.G1057.12 Capsicum annuum
CAN.G199.37 Capsicum annuum
CAN.G327.2 Capsicum annuum
CAN.G492.46 Capsicum annuum
CAN.G623.43 Capsicum annuum
CANSAT11G2676 Cannabis sativa
CANSAT64G2102 Cannabis sativa
CARHR148390 Cardamine hirsuta
CARHR148810 Cardamine hirsuta
CARHR213630 Cardamine hirsuta
CARHR234100 Cardamine hirsuta
Carub.0001s4438 Capsella rubella
Carub.0005s0542 Capsella rubella
Carub.0005s0585 Capsella rubella
Carub.0007s1437 Capsella rubella
Carub.0007s3463 Capsella rubella
Ca_00912_v3 Cicer arietinum L.
Ca_02736_v3 Cicer arietinum L.
Ca_04378_v3 Cicer arietinum L.
Ca_06422_v3 Cicer arietinum L.
Ca_14840_v3 Cicer arietinum L.
Ca_27882_v3 Cicer arietinum L.
Ca_29137_v3 Cicer arietinum L.
Ca_30931_v3 Cicer arietinum L.
Cc05_g15420 Coffea canephora
Cc07_g00070 Coffea canephora
Cc07_g00700 Coffea canephora
Cc07_g00710 Coffea canephora
CDE02G1042 Ceratophyllum demersum
CDE02G1686 Ceratophyllum demersum
CDE02G2995 Ceratophyllum demersum
CDE02G3251 Ceratophyllum demersum
CDE05G2914 Ceratophyllum demersum
CDE10G0484 Ceratophyllum demersum
CDE10G0817 Ceratophyllum demersum
Cfa007241 Carpinus fangiana
Cfa018838 Carpinus fangiana
Cfa021901 Carpinus fangiana
Cfa024484 Carpinus fangiana
Ciclev10008025m.g Citrus clementina
Ciclev10015113m.g Citrus clementina
Ciclev10015123m.g Citrus clementina
CiPaw.03G054200 Carya illinoinensis
CiPaw.11G009000 Carya illinoinensis
CiPaw.11G207700 Carya illinoinensis
CiPaw.12G041900 Carya illinoinensis
CiPaw.12G141200 Carya illinoinensis
ClCG05G011890 Citrullus lanatus
ClCG09G021610 Citrullus lanatus
COL.COLO4_07751 Corchorus olitorius
COL.COLO4_17174 Corchorus olitorius
COL.COLO4_29186 Corchorus olitorius
Cpa.g.sc12.97 Carica papaya
Cpa.g.sc130.75 Carica papaya
Cpa.g.sc48.215 Carica papaya
Cpa.g.sc701.3 Carica papaya
Cre13.g573800 Chlamydomonas reinhardtii
Cre16.g681850 Chlamydomonas reinhardtii
CsaV3_3G020520 Cucumis sativus L.
CsaV3_7G021480 Cucumis sativus L.
CSS0000603 Camellia sinensis var. sinensis
CSS0004219 Camellia sinensis var. sinensis
CSS0008331 Camellia sinensis var. sinensis
CSS0015085 Camellia sinensis var. sinensis
CSS0023613 Camellia sinensis var. sinensis
CSS0030892 Camellia sinensis var. sinensis
CSS0038124 Camellia sinensis var. sinensis
CSS0040097 Camellia sinensis var. sinensis
CSS0046627 Camellia sinensis var. sinensis
DCAR_011317 Daucus carota
DCAR_013264 Daucus carota
DCAR_015065 Daucus carota
DCAR_015092 Daucus carota
Dinv10367 Davidia involucrata
Dinv25667 Davidia involucrata
Dinv33419 Davidia involucrata
Dinv40890 Davidia involucrata
Duzib084G0620 Durio zibethinus
Duzib147G0250 Durio zibethinus
Duzib187G1463 Durio zibethinus
Duzib213G0502 Durio zibethinus
Duzib268G0671 Durio zibethinus
ECA240G3023 Erigeron canadensis
ECA246G0314 Erigeron canadensis
EL10Ac2g03223 Beta vulgaris
EL10Ac4g07515 Beta vulgaris
Eucgr.F02018 Eucalyptus grandis
Eucgr.F03667 Eucalyptus grandis
Eucgr.I01725 Eucalyptus grandis
Eucgr.J02325 Eucalyptus grandis
FAN02G0828 Fragaria x ananassa
FAN02G1279 Fragaria x ananassa
FAN05G2454 Fragaria x ananassa
FAN05G3807 Fragaria x ananassa
FAN09G3003 Fragaria x ananassa
FAN09G3185 Fragaria x ananassa
FAN14G2453 Fragaria x ananassa
FAN14G2507 Fragaria x ananassa
FAN14G5772 Fragaria x ananassa
FAN21G1588 Fragaria x ananassa
FAN21G3417 Fragaria x ananassa
FAN25G0713 Fragaria x ananassa
FvH4_3g42151 Fragaria vesca
FvH4_6g51940 Fragaria vesca
FvH4_6g53220 Fragaria vesca
Glyma.02G302900 Glycine max
Glyma.08G333400 Glycine max
Glyma.14G011000 Glycine max
Glyma.16G058200 Glycine max
Glyma.17G129000 Glycine max
Glyma.18G073400 Glycine max
Glyma.19G051200 Glycine max
Glyma.19G089100 Glycine max
Gohir.A01G094500 Gossypium hirsutum
Gohir.A04G004000 Gossypium hirsutum
Gohir.A05G354300 Gossypium hirsutum
Gohir.A07G227400 Gossypium hirsutum
Gohir.A09G035100 Gossypium hirsutum
Gohir.A10G159300 Gossypium hirsutum
Gohir.A13G130400 Gossypium hirsutum
Gohir.D01G079000 Gossypium hirsutum
Gohir.D04G058800 Gossypium hirsutum
Gohir.D05G386000 Gossypium hirsutum
Gohir.D07G234500 Gossypium hirsutum
Gohir.D09G036000 Gossypium hirsutum
Gohir.D10G084351 Gossypium hirsutum
Gohir.D13G133700 Gossypium hirsutum
Gorai.001G270100 Gossypium raimondii
Gorai.002G103600 Gossypium raimondii
Gorai.006G041100 Gossypium raimondii
Gorai.009G452400 Gossypium raimondii
Gorai.011G091700 Gossypium raimondii
Gorai.012G065500 Gossypium raimondii
Gorai.013G150100 Gossypium raimondii
GSVIVG01001805001 Vitis vinifera
GSVIVG01001806001 Vitis vinifera
GSVIVG01008517001 Vitis vinifera
GSVIVG01008519001 Vitis vinifera
GSVIVG01014838001 Vitis vinifera
GSVIVG01032376001 Vitis vinifera
HanXRQChr03g0080441 Helianthus annuus
HanXRQChr05g0160261 Helianthus annuus
HanXRQChr06g0164251 Helianthus annuus
HanXRQChr07g0198281 Helianthus annuus
HanXRQChr08g0207821 Helianthus annuus
HanXRQChr13g0408301 Helianthus annuus
HanXRQChr14g0450681 Helianthus annuus
HanXRQChr17g0548671 Helianthus annuus
Haze_07232 Corylus avellana
Haze_09876 Corylus avellana
Haze_14859 Corylus avellana
Hma1.2p1_0193F.1_g084010 Hydrangea macrophylla
Hma1.2p1_0279F.1_g112630 Hydrangea macrophylla
Hma1.2p1_1563F.1_g290800 Hydrangea macrophylla
Hma1.2p1_1747F.1_g300630 Hydrangea macrophylla
Hma1.2p1_2203F.1_g317060 Hydrangea macrophylla
Hma1.2p1_2203F.1_g317065 Hydrangea macrophylla
Hma1.2p1_2203F.1_g317090 Hydrangea macrophylla
HPP92_001416 Vanilla planifolia
HPP92_001423 Vanilla planifolia
HPP92_006978 Vanilla planifolia
HPP92_006999 Vanilla planifolia
HPP92_028591 Vanilla planifolia
HPP92_028592 Vanilla planifolia
HPP92_028593 Vanilla planifolia
Hund01853 Selenicereus undatus
Hund20630 Selenicereus undatus
Hund23010 Selenicereus undatus
Hund24910 Selenicereus undatus
Lalb_Chr02g0157741 Lupinus albus
Lalb_Chr04g0247711 Lupinus albus
Lalb_Chr15g0082401 Lupinus albus
Lalb_Chr21g0317511 Lupinus albus
Lalb_Chr21g0317741 Lupinus albus
Lalb_Chr24g0403351 Lupinus albus
Lj1C896T0 Lonicera japonica
Lj1g0009104 Lotus japonicus
Lj2g0003233 Lotus japonicus
Lj4g0026379 Lotus japonicus
Lj6g0025573 Lotus japonicus
Lj7A601G109 Lonicera japonica
Lj7A601T110 Lonicera japonica
LjContig00081g0020129 Lotus japonicus
Lju41A51T46 Lonicera japonica
Lsat_1_v5_gn_0_18220 Lactuca sativa
Lsat_1_v5_gn_2_94120 Lactuca sativa
Lsat_1_v5_gn_3_115820 Lactuca sativa
Lsat_1_v5_gn_9_89160 Lactuca sativa
Manes.05G202600 Manihot esculenta
Manes.15G152400 Manihot esculenta
Manes.15G159500 Manihot esculenta
Mapoly0101s0040 Marchantia polymorpha
MBI07_g15326_MAGBIO Magnolia biondii
MBI07_g46615_MAGBIO Magnolia biondii
MBI10_g08623_MAGBIO Magnolia biondii
MBI10_g39499_MAGBIO Magnolia biondii
MBI10_g45354_MAGBIO Magnolia biondii
MBI14_g29294_MAGBIO Magnolia biondii
MCO05G737 Micromonas commoda
MD03G1037600 Malus domestica
MD09G1012900 Malus domestica
MD09G1021600 Malus domestica
MD11G1038800 Malus domestica
MD17G1013500 Malus domestica
Medtr3g061030 Medicago truncatula
Medtr4g103620 Medicago truncatula
Medtr5g096660 Medicago truncatula
Medtr6g021580 Medicago truncatula
Medtr7g029450 Medicago truncatula
MELO3C013202.2 Cucumis melo
MELO3C023784.2 Cucumis melo
Migut.F00074 Erythranthe guttata
Migut.H00023 Erythranthe guttata
Migut.M01619 Erythranthe guttata
MSTRG.15815 Avicennia marina
MSTRG.24089 Avicennia marina
MSTRG.3082 Avicennia marina
MSTRG.7019 Avicennia marina
Nitab4.5_0000040g0660 Nicotiana tabacum
Nitab4.5_0000152g0250 Nicotiana tabacum
Nitab4.5_0001112g0030 Nicotiana tabacum
Nitab4.5_0001550g0020 Nicotiana tabacum
Nitab4.5_0001622g0020 Nicotiana tabacum
Nitab4.5_0002000g0070 Nicotiana tabacum
Nitab4.5_0007214g0020 Nicotiana tabacum
Nitab4.5_0007227g0050 Nicotiana tabacum
Nn1g07584 Nelumbo nucifera
Nn3g16503 Nelumbo nucifera
Nn3g16676 Nelumbo nucifera
Oeu006945.1 Olea europaea
Oeu011961.1 Olea europaea
Oeu019697.2 Olea europaea
Oeu023583.1 Olea europaea
Oeu025018.1 Olea europaea
Oeu058776.2 Olea europaea
Os02g0273000 Oryza sativa ssp. japonica
Os08g0530000 Oryza sativa ssp. japonica
Os09g0505800 Oryza sativa ssp. japonica
Os11g0265000 Oryza sativa ssp. japonica
Peaxi162Scf00075g01933 Petunia axillaris
Peaxi162Scf00080g01322 Petunia axillaris
Peaxi162Scf00232g00114 Petunia axillaris
PGR083G0241 Punica granatum
PGR083G0884 Punica granatum
PGR142G2795 Punica granatum
PGSC0003DMG400006962 Solanum tuberosum
PGSC0003DMG400014372 Solanum tuberosum
PGSC0003DMG400026129 Solanum tuberosum
Phvul.001G114500 Phaseolus vulgaris
Phvul.003G210100 Phaseolus vulgaris
Phvul.004G066400 Phaseolus vulgaris
Phvul.006G059500 Phaseolus vulgaris
Phvul.008G281900 Phaseolus vulgaris
Potri.001G332100 Populus trichocarpa
Potri.001G467800 Populus trichocarpa
Potri.011G165100 Populus trichocarpa
Potri.017G069600 Populus trichocarpa
Potri.017G071200 Populus trichocarpa
Pp3c15_5700 Physcomitrium patens
Pp3c18_8810 Physcomitrium patens
Pp3c21_7820 Physcomitrium patens
Pp3c22_13790 Physcomitrium patens
Pp3c9_5950 Physcomitrium patens
Pp3s92_20 Physcomitrium patens
PRCOL_00003439 Prasinoderma coloniale
Prupe.3G294700 Prunus persica
Prupe.3G304300 Prunus persica
Prupe.6G029400 Prunus persica
Psat0s2154g0120 Pisum sativum
Psat0s3053g0120 Pisum sativum
Psat1g082160 Pisum sativum
Psat2g005920 Pisum sativum
Psat5g166040 Pisum sativum
Psat7g264200 Pisum sativum
PSO017G5670 Papaver somniferum
PSO478G3579 Papaver somniferum
PSO541G2404 Papaver somniferum
PSO675G3878 Papaver somniferum
PSO754G0018 Papaver somniferum
QL02p071668 Quercus lobata
QL08p002534 Quercus lobata
QL10p004071 Quercus lobata
RcHm_v2.0_Chr2g0143031 Rosa chinensis
RcHm_v2.0_Chr2g0143071 Rosa chinensis
RcHm_v2.0_Chr2g0173421 Rosa chinensis
RcHm_v2.0_Chr2g0175311 Rosa chinensis
RcHm_v2.0_Chr5g0075381 Rosa chinensis
Rhsim04G0009900 Rhododendron simsii
Rhsim08G0043800 Rhododendron simsii
Rhsim10G0014100 Rhododendron simsii
Sabra16G0213000 Salix brachista
Sabra17G0061000 Salix brachista
Sabra17G0063800 Salix brachista
SalBow1G0724 Salvia bowleyana
SalBow1G5172 Salvia bowleyana
SalBow4G2777 Salvia bowleyana
SalBow4G2799 Salvia bowleyana
SalBow8G3612 Salvia bowleyana
Sc03g0006620 Simmondsia chinensis
Sc03g0011670 Simmondsia chinensis
Sc07g0003160 Simmondsia chinensis
Sc07g0004140 Simmondsia chinensis
Sed0006933 Sechium edule
Sed0007213 Sechium edule
Sed0017578 Sechium edule
Sed0022182 Sechium edule
Sed0024857 Sechium edule
SEGI_07688 Sequoiadendron giganteum
SEGI_13608 Sequoiadendron giganteum
SEGI_29804 Sequoiadendron giganteum
SEGI_36868 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08269 Striga asiatica
SGA_v2.0_scaffold18G08530 Striga asiatica
SGA_v2.0_scaffold42G15943 Striga asiatica
SGA_v2.0_scaffold44G16908 Striga asiatica
SMO240G0042 Selaginella moellendorffii
SMO340G0126 Selaginella moellendorffii
Solyc02g067880.3 Solanum lycopersicum
Solyc06g065580.3 Solanum lycopersicum
Solyc07g065890.3 Solanum lycopersicum
Solyc10g005880.3 Solanum lycopersicum
Sopen02g017000 Solanum pennellii
Sopen06g024100 Solanum pennellii
Sopen07g034080 Solanum pennellii
Sopen10g001830 Solanum pennellii
Sp1g41380 Schrenkiella parvula
Sp2g16320 Schrenkiella parvula
Sp2g16640 Schrenkiella parvula
Sp6g17870 Schrenkiella parvula
Sp7g01060 Schrenkiella parvula
Sp7g24470 Schrenkiella parvula
TAR029G0002 Trochodendron aralioides
TAR371G0909 Trochodendron aralioides
TAR622G0814 Trochodendron aralioides
TAR626G1011 Trochodendron aralioides
THA.LOC104805332 Tarenaya hassleriana
THA.LOC104811687 Tarenaya hassleriana
THA.LOC104817718 Tarenaya hassleriana
THA.LOC104822714 Tarenaya hassleriana
THA.LOC104825314 Tarenaya hassleriana
THA.LOC104825615 Tarenaya hassleriana
Thecc.03G127200 Theobroma cacao
Thecc.04G020800 Theobroma cacao
Thecc.04G033900 Theobroma cacao
Thecc.07G006900 Theobroma cacao
Thhalv10004106m.g Eutrema salsugineum
Thhalv10005624m.g Eutrema salsugineum
Thhalv10011455m.g Eutrema salsugineum
Thhalv10013448m.g Eutrema salsugineum
Thhalv10015773m.g Eutrema salsugineum
Thhalv10025112m.g Eutrema salsugineum
Thhalv10027737m.g Eutrema salsugineum
TPR.G1257 Trifolium pratense
TPR.G18597 Trifolium pratense
TPR.G21638 Trifolium pratense
TPR.G22102 Trifolium pratense
TPR.G2799 Trifolium pratense
TPR.G29520 Trifolium pratense
TPR.G3140 Trifolium pratense
TWI12G0558 Tripterygium wilfordii
TWI36G0054 Tripterygium wilfordii
TWI38G1406 Tripterygium wilfordii
unitig_21.g20478 Utricularia gibba
unitig_52.g17658 Utricularia gibba
unitig_62.g23315 Utricularia gibba
unitig_62.g23316 Utricularia gibba
unitig_85.g27356 Utricularia gibba
vmacro05882 Vaccinium macrocarpon
vmacro05949 Vaccinium macrocarpon
vmacro09614 Vaccinium macrocarpon
vmacro09615 Vaccinium macrocarpon
vmacro18335 Vaccinium macrocarpon
VMungo0464G0560 Vigna mungo
VMungo0464G1646 Vigna mungo
VMungo0540G0756 Vigna mungo
VMungo0647G0808 Vigna mungo
VMungo1215G2400 Vigna mungo
VMungo1383G1651 Vigna mungo
Zm00001eb036480 Zea mays
Zm00001eb102380 Zea mays
Zm00001eb139240 Zea mays
Zm00001eb210120 Zea mays
Zm00001eb229170 Zea mays
Zm00001eb241070 Zea mays

User provided reference genes

Program Settings