Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07160 Brassica napus
A03p29970 Brassica napus
A03p30000 Brassica napus
A03p45220 Brassica napus
A03p60510 Brassica napus
A05p13280 Brassica napus
A08p18920 Brassica napus
A10p03580 Brassica napus
Aa31LG2G19300 Aethionema arabicum
Aa31LG5G4750 Aethionema arabicum
Aa31LG7G12450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2686 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1728 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4681 Anthoceros agrestis
Actinidia02347 Actinidia chinensis
Actinidia05728 Actinidia chinensis
Actinidia09737 Actinidia chinensis
Actinidia13743 Actinidia chinensis
Actinidia19807 Actinidia chinensis
Actinidia23605 Actinidia chinensis
Actinidia24502 Actinidia chinensis
Actinidia38686 Actinidia chinensis
Ah.01g003480 Amaranthus hybridus
Ah.09g234620 Amaranthus hybridus
Ah.14g078160 Amaranthus hybridus
Ah.14g080110 Amaranthus hybridus
Ah.14g080120 Amaranthus hybridus
AL1G14830 Arabidopsis lyrata
AL4G14640 Arabidopsis lyrata
AL4G27980 Arabidopsis lyrata
AL6G47904 Arabidopsis lyrata
AL6G47906 Arabidopsis lyrata
Aqoxy1G03052 Aquilegia oxysepala
Aqoxy2G03195 Aquilegia oxysepala
Aqoxy3G01921 Aquilegia oxysepala
Aqoxy7G02780 Aquilegia oxysepala
Aqoxy7G03474 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1K1DUM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.759XNZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJIU1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2KTVH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HZHI7V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT31JI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LL0LKQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVI61E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE9AC5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SE5II1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZMB1P7 Arachis hypogaea
AT1G05070 Arabidopsis thaliana
AT2G24290 Arabidopsis thaliana
AT2G32580 Arabidopsis thaliana
AT4G04360 Arabidopsis thaliana
AT4G30996 Arabidopsis thaliana
ATR0626G342 Amborella trichopoda
ATR0681G295 Amborella trichopoda
ATR1153G089 Amborella trichopoda
Atru.chr2.497 Acer truncatum
Atru.chr6.3226 Acer truncatum
Atru.chr7.167 Acer truncatum
AUR62011269 Chenopodium quinoa
AUR62021915 Chenopodium quinoa
AUR62025075 Chenopodium quinoa
AUR62026988 Chenopodium quinoa
AUR62030828 Chenopodium quinoa
AUR62037149 Chenopodium quinoa
AUR62042024 Chenopodium quinoa
BcaB01g01802 Brassica carinata
BcaB01g02597 Brassica carinata
BcaB02g06882 Brassica carinata
BcaB02g10461 Brassica carinata
BcaB03g12672 Brassica carinata
BcaB04g18197 Brassica carinata
BcaC01g01119 Brassica carinata
BcaC04g21287 Brassica carinata
BcaC05g24418 Brassica carinata
BcaNung01549 Brassica carinata
BcaNung03422 Brassica carinata
BolC1t00779H Brassica oleracea
BolC3t15935H Brassica oleracea
BolC3t21143H Brassica oleracea
BolC4t23261H Brassica oleracea
BolC5t29108H Brassica oleracea
BolC7t46292H Brassica oleracea
BraA01t00668Z Brassica rapa
BraA03t12186Z Brassica rapa
BraA05t20269Z Brassica rapa
BraA08t33855Z Brassica rapa
BraA10t42635Z Brassica rapa
C01p07920 Brassica napus
C03p36260 Brassica napus
C03p88330 Brassica napus
C04p17090 Brassica napus
C05p03270 Brassica napus
C07p58380 Brassica napus
CAN.G1014.33 Capsicum annuum
CAN.G1134.11 Capsicum annuum
CAN.G290.5 Capsicum annuum
CAN.G520.18 Capsicum annuum
CANSAT11G2549 Cannabis sativa
CANSAT54G2411 Cannabis sativa
CANSAT64G2340 Cannabis sativa
CARHR004540 Cardamine hirsuta
CARHR117810 Cardamine hirsuta
CARHR126430 Cardamine hirsuta
CARHR238920 Cardamine hirsuta
CARHR253070 Cardamine hirsuta
Carub.0001s0435 Capsella rubella
Carub.0004s0362 Capsella rubella
Carub.0004s1391 Capsella rubella
Carub.0006s3220 Capsella rubella
Carub.0007s0952 Capsella rubella
Ca_00684_v3 Cicer arietinum L.
Ca_03814_v3 Cicer arietinum L.
Ca_19495_v3 Cicer arietinum L.
Cc05_g03640 Coffea canephora
Cc06_g15330 Coffea canephora
Cc06_g15360 Coffea canephora
CDE02G3109 Ceratophyllum demersum
CDE05G0911 Ceratophyllum demersum
CDE05G1025 Ceratophyllum demersum
CDE07G0103 Ceratophyllum demersum
CDE09G1134 Ceratophyllum demersum
Cfa000176 Carpinus fangiana
Cfa014341 Carpinus fangiana
Ciclev10002660m.g Citrus clementina
Ciclev10010826m.g Citrus clementina
Ciclev10016847m.g Citrus clementina
CiPaw.03G157900 Carya illinoinensis
CiPaw.04G113100 Carya illinoinensis
CiPaw.07G014200 Carya illinoinensis
CiPaw.08G167400 Carya illinoinensis
CiPaw.15G173500 Carya illinoinensis
CiPaw.16G115400 Carya illinoinensis
ClCG02G002080 Citrullus lanatus
ClCG02G009050 Citrullus lanatus
ClCG03G016750 Citrullus lanatus
ClCG11G003550 Citrullus lanatus
COL.COLO4_12127 Corchorus olitorius
COL.COLO4_18769 Corchorus olitorius
COL.COLO4_21835 Corchorus olitorius
Cpa.g.sc152.45 Carica papaya
Cpa.g.sc3350.1 Carica papaya
Cpa.g.sc46.119 Carica papaya
CsaV3_1G039220 Cucumis sativus L.
CsaV3_2G003420 Cucumis sativus L.
CsaV3_2G034690 Cucumis sativus L.
CsaV3_7G003420 Cucumis sativus L.
CSS0009857 Camellia sinensis var. sinensis
CSS0011442 Camellia sinensis var. sinensis
CSS0016277 Camellia sinensis var. sinensis
CSS0020695 Camellia sinensis var. sinensis
CSS0023300 Camellia sinensis var. sinensis
CSS0033704 Camellia sinensis var. sinensis
CSS0034989 Camellia sinensis var. sinensis
CSS0048044 Camellia sinensis var. sinensis
CSS0049076 Camellia sinensis var. sinensis
DCAR_003311 Daucus carota
DCAR_005539 Daucus carota
DCAR_016297 Daucus carota
DCAR_019265 Daucus carota
DCAR_021156 Daucus carota
DCAR_028360 Daucus carota
DCAR_029444 Daucus carota
Dinv08747 Davidia involucrata
Dinv23298 Davidia involucrata
Dinv39729 Davidia involucrata
Dinv40252 Davidia involucrata
Dinv42890 Davidia involucrata
Duzib133G0263 Durio zibethinus
Duzib138G1311 Durio zibethinus
Duzib138G1583 Durio zibethinus
Duzib150G0294 Durio zibethinus
Duzib168G1628 Durio zibethinus
Duzib187G0314 Durio zibethinus
Duzib211G0013 Durio zibethinus
Duzib264G1215 Durio zibethinus
ECA236G0455 Erigeron canadensis
ECA236G4482 Erigeron canadensis
ECA240G4783 Erigeron canadensis
EL10Ac8g18843 Beta vulgaris
EL10Ac8g20106 Beta vulgaris
EL10Ac9g22222 Beta vulgaris
EL10Ac9g22349 Beta vulgaris
Eucgr.A01108 Eucalyptus grandis
Eucgr.B02003 Eucalyptus grandis
Eucgr.C00379 Eucalyptus grandis
Eucgr.D01353 Eucalyptus grandis
FAN02G1558 Fragaria x ananassa
FAN02G4415 Fragaria x ananassa
FAN05G0353 Fragaria x ananassa
FAN05G1150 Fragaria x ananassa
FAN05G3421 Fragaria x ananassa
FAN09G0465 Fragaria x ananassa
FAN09G4738 Fragaria x ananassa
FAN14G0391 Fragaria x ananassa
FAN14G4388 Fragaria x ananassa
FAN14G5969 Fragaria x ananassa
FAN19G1074 Fragaria x ananassa
FAN23G0901 Fragaria x ananassa
FAN26G1061 Fragaria x ananassa
FAN28G0468 Fragaria x ananassa
FvH4_1g01280 Fragaria vesca
FvH4_6g05250 Fragaria vesca
FvH4_6g42750 Fragaria vesca
Glyma.03G240700 Glycine max
Glyma.06G308000 Glycine max
Glyma.09G006500 Glycine max
Glyma.09G098800 Glycine max
Glyma.12G096800 Glycine max
Glyma.13G310400 Glycine max
Glyma.15G110900 Glycine max
Glyma.15G206000 Glycine max
Glyma.19G238000 Glycine max
Gohir.1Z067200 Gossypium hirsutum
Gohir.A01G124800 Gossypium hirsutum
Gohir.A01G190800 Gossypium hirsutum
Gohir.A02G094101 Gossypium hirsutum
Gohir.A03G098900 Gossypium hirsutum
Gohir.A03G134900 Gossypium hirsutum
Gohir.A04G031304 Gossypium hirsutum
Gohir.A04G102300 Gossypium hirsutum
Gohir.A05G051000 Gossypium hirsutum
Gohir.A05G277301 Gossypium hirsutum
Gohir.A05G373850 Gossypium hirsutum
Gohir.A05G376100 Gossypium hirsutum
Gohir.A06G118302 Gossypium hirsutum
Gohir.A06G136100 Gossypium hirsutum
Gohir.A07G025700 Gossypium hirsutum
Gohir.A07G081800 Gossypium hirsutum
Gohir.A07G089700 Gossypium hirsutum
Gohir.A07G160950 Gossypium hirsutum
Gohir.A08G043400 Gossypium hirsutum
Gohir.A08G251400 Gossypium hirsutum
Gohir.A11G154400 Gossypium hirsutum
Gohir.A11G229700 Gossypium hirsutum
Gohir.A11G236240 Gossypium hirsutum
Gohir.A12G067400 Gossypium hirsutum
Gohir.D05G052550 Gossypium hirsutum
Gohir.D07G029500 Gossypium hirsutum
Gohir.D07G088300 Gossypium hirsutum
Gohir.D08G272900 Gossypium hirsutum
Gohir.D11G161200 Gossypium hirsutum
Gorai.001G030700 Gossypium raimondii
Gorai.001G094500 Gossypium raimondii
Gorai.004G291300 Gossypium raimondii
Gorai.007G171700 Gossypium raimondii
Gorai.009G054300 Gossypium raimondii
Gorai.012G044900 Gossypium raimondii
GSVIVG01002816001 Vitis vinifera
GSVIVG01003726001 Vitis vinifera
GSVIVG01030473001 Vitis vinifera
HanXRQChr03g0073431 Helianthus annuus
HanXRQChr04g0126991 Helianthus annuus
HanXRQChr05g0137791 Helianthus annuus
HanXRQChr06g0180601 Helianthus annuus
HanXRQChr10g0314601 Helianthus annuus
HanXRQChr12g0357291 Helianthus annuus
HanXRQChr16g0506701 Helianthus annuus
Haze_04242 Corylus avellana
Haze_06843 Corylus avellana
Haze_12802 Corylus avellana
Haze_19241 Corylus avellana
Hma1.2p1_0028F.1_g017310 Hydrangea macrophylla
Hma1.2p1_0091F.1_g046590 Hydrangea macrophylla
Hma1.2p1_0109F.1_g052390 Hydrangea macrophylla
Hma1.2p1_0666F.1_g199380 Hydrangea macrophylla
Hma1.2p1_0895F.1_g233775 Hydrangea macrophylla
Hma1.2p1_1630F.1_g294560 Hydrangea macrophylla
HPP92_018557 Vanilla planifolia
HPP92_019556 Vanilla planifolia
Hund01257 Selenicereus undatus
Hund21624 Selenicereus undatus
Lalb_Chr03g0028591 Lupinus albus
Lalb_Chr08g0233941 Lupinus albus
Lalb_Chr11g0072751 Lupinus albus
Lalb_Chr14g0375861 Lupinus albus
Lalb_Chr15g0087721 Lupinus albus
Lalb_Chr15g0087731 Lupinus albus
Lalb_Chr18g0045491 Lupinus albus
Lalb_Chr19g0136041 Lupinus albus
Lalb_Chr20g0118891 Lupinus albus
Lj1g0016467 Lotus japonicus
Lj2C265T1 Lonicera japonica
Lj3g0012677 Lotus japonicus
Lj6g0006248 Lotus japonicus
Lj6g0024799 Lotus japonicus
Lj8C127T3 Lonicera japonica
Lj9A495G53 Lonicera japonica
Lj9C681T4 Lonicera japonica
Lsat_1_v5_gn_5_91381 Lactuca sativa
Lsat_1_v5_gn_7_93241 Lactuca sativa
Lsat_1_v5_gn_8_61181 Lactuca sativa
Lsat_1_v5_gn_9_106761 Lactuca sativa
Manes.04G099600 Manihot esculenta
Manes.06G038200 Manihot esculenta
Manes.08G123600 Manihot esculenta
Manes.12G072300 Manihot esculenta
Manes.14G141600 Manihot esculenta
Manes.17G028601 Manihot esculenta
Mapoly0042s0084 Marchantia polymorpha
Mapoly0098s0028 Marchantia polymorpha
Mapoly0138s0016 Marchantia polymorpha
MBI05_g43473_MAGBIO Magnolia biondii
MBI07_g01735_MAGBIO Magnolia biondii
MBI14_g40712_MAGBIO Magnolia biondii
MBI15_g09159_MAGBIO Magnolia biondii
MBI19_g15842_MAGBIO Magnolia biondii
MD02G1010700 Malus domestica
MD04G1210200 Malus domestica
MD09G1063300 Malus domestica
MD09G1071500 Malus domestica
MD15G1155600 Malus domestica
MD17G1100600 Malus domestica
Medtr2g024090 Medicago truncatula
Medtr2g450100 Medicago truncatula
Medtr4g050050 Medicago truncatula
Medtr7g113900 Medicago truncatula
MELO3C004488.2 Cucumis melo
MELO3C015346.2 Cucumis melo
MELO3C018832.2 Cucumis melo
MELO3C019299.2 Cucumis melo
Migut.F01583 Erythranthe guttata
Migut.J01316 Erythranthe guttata
Migut.K00346 Erythranthe guttata
Migut.M00435 Erythranthe guttata
MSTRG.12284 Avicennia marina
MSTRG.14856 Avicennia marina
MSTRG.26299 Avicennia marina
MSTRG.6103 Avicennia marina
MSTRG.6580 Avicennia marina
Nitab4.5_0000130g0290 Nicotiana tabacum
Nitab4.5_0000424g0020 Nicotiana tabacum
Nitab4.5_0001094g0100 Nicotiana tabacum
Nitab4.5_0001409g0120 Nicotiana tabacum
Nitab4.5_0001423g0130 Nicotiana tabacum
Nitab4.5_0004743g0020 Nicotiana tabacum
Nitab4.5_0004940g0010 Nicotiana tabacum
Nitab4.5_0005407g0010 Nicotiana tabacum
Nitab4.5_0006209g0020 Nicotiana tabacum
Nitab4.5_0006248g0060 Nicotiana tabacum
Nitab4.5_0012302g0010 Nicotiana tabacum
Nn1g03448 Nelumbo nucifera
Nn1g07233 Nelumbo nucifera
Nn4g26425 Nelumbo nucifera
Oeu019006.1 Olea europaea
Oeu026543.2 Olea europaea
Oeu027236.1 Olea europaea
Oeu028812.1 Olea europaea
Oeu036743.1 Olea europaea
Oeu041914.1 Olea europaea
Oeu043490.1 Olea europaea
Oeu050486.1 Olea europaea
Os03g0777500 Oryza sativa ssp. japonica
Os04g0501800 Oryza sativa ssp. japonica
Peaxi162Scf00007g00127 Petunia axillaris
Peaxi162Scf00071g00729 Petunia axillaris
Peaxi162Scf00178g00614 Petunia axillaris
Peaxi162Scf00295g00065 Petunia axillaris
Peaxi162Scf00347g00623 Petunia axillaris
Peaxi162Scf00434g00330 Petunia axillaris
PGR004G0794 Punica granatum
PGR042G0388 Punica granatum
PGR083G0295 Punica granatum
PGR083G1764 Punica granatum
PGR142G2195 Punica granatum
PGSC0003DMG400001084 Solanum tuberosum
PGSC0003DMG400003189 Solanum tuberosum
PGSC0003DMG400028573 Solanum tuberosum
Phvul.005G116600 Phaseolus vulgaris
Phvul.006G094800 Phaseolus vulgaris
Phvul.006G146800 Phaseolus vulgaris
Phvul.006G146900 Phaseolus vulgaris
Phvul.009G193900 Phaseolus vulgaris
Phvul.011G101400 Phaseolus vulgaris
Potri.002G227100 Populus trichocarpa
Potri.004G006500 Populus trichocarpa
Potri.005G038000 Populus trichocarpa
Potri.006G187800 Populus trichocarpa
Potri.013G026900 Populus trichocarpa
Potri.014G155600 Populus trichocarpa
Potri.018G111100 Populus trichocarpa
Prupe.3G213900 Prunus persica
Prupe.6G331100 Prunus persica
Prupe.7G259500 Prunus persica
Psat1g022280 Pisum sativum
Psat1g178000 Pisum sativum
Psat3g009400 Pisum sativum
Psat7g203720 Pisum sativum
PSO170G1895 Papaver somniferum
PSO302G0230 Papaver somniferum
PSO384G0808 Papaver somniferum
PSO384G2663 Papaver somniferum
PSO541G2230 Papaver somniferum
PSO675G8205 Papaver somniferum
PSO675G8816 Papaver somniferum
PSO676G0004 Papaver somniferum
PSO732G0199 Papaver somniferum
QL02p092509 Quercus lobata
QL03p004217 Quercus lobata
QL05p072307 Quercus lobata
QL08p031611 Quercus lobata
QL08p031615 Quercus lobata
RcHm_v2.0_Chr2g0086111 Rosa chinensis
RcHm_v2.0_Chr2g0158641 Rosa chinensis
RcHm_v2.0_Chr3g0453981 Rosa chinensis
Rhsim05G0144900 Rhododendron simsii
Rhsim05G0145000 Rhododendron simsii
Rhsim06G0165500 Rhododendron simsii
RhsimUnG0234500 Rhododendron simsii
Sabra02G0173700 Salix brachista
Sabra04G0003300 Salix brachista
Sabra05G0038100 Salix brachista
Sabra11G0007200 Salix brachista
Sabra11G0007400 Salix brachista
Sabra13G0027600 Salix brachista
Sabra14G0117700 Salix brachista
Sabra18G0093700 Salix brachista
SalBow1G4776 Salvia bowleyana
SalBow7G1371 Salvia bowleyana
Sc08g0005010 Simmondsia chinensis
Sc12g0002220 Simmondsia chinensis
Sc17g0007520 Simmondsia chinensis
Sed0010935 Sechium edule
Sed0016716 Sechium edule
Sed0019175 Sechium edule
Sed0022232 Sechium edule
Sed0022392 Sechium edule
Sed0023005 Sechium edule
SEGI_28609 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06463 Striga asiatica
SGA_v2.0_scaffold229G43364 Striga asiatica
SGA_v2.0_scaffold34G13753 Striga asiatica
SGA_v2.0_scaffold45G17053 Striga asiatica
SGA_v2.0_scaffold70G23394 Striga asiatica
SHI10367 Sapria himalayana
SMO358G0620 Selaginella moellendorffii
Solyc01g098600.3 Solanum lycopersicum
Solyc02g080960.3 Solanum lycopersicum
Solyc07g005180.3 Solanum lycopersicum
Solyc07g049730.3 Solanum lycopersicum
Sopen01g042150 Solanum pennellii
Sopen02g025640 Solanum pennellii
Sopen07g001590 Solanum pennellii
Sopen07g025330 Solanum pennellii
Sp1g03950 Schrenkiella parvula
Sp4g03290 Schrenkiella parvula
Sp4g14910 Schrenkiella parvula
Sp6g04480 Schrenkiella parvula
Sp7g28890 Schrenkiella parvula
TAR624G1396 Trochodendron aralioides
TAR625G1244 Trochodendron aralioides
TAR626G1283 Trochodendron aralioides
TAR636G0358 Trochodendron aralioides
TAR636G2133 Trochodendron aralioides
TAR643G0002 Trochodendron aralioides
TAR643G0008 Trochodendron aralioides
THA.LOC104803895 Tarenaya hassleriana
THA.LOC104813387 Tarenaya hassleriana
THA.LOC104816039 Tarenaya hassleriana
THA.LOC104819912 Tarenaya hassleriana
THA.LOC104826142 Tarenaya hassleriana
Thecc.01G143600 Theobroma cacao
Thecc.01G177700 Theobroma cacao
Thecc.02G212800 Theobroma cacao
Thecc.09G034600 Theobroma cacao
Thhalv10000399m.g Eutrema salsugineum
Thhalv10008574m.g Eutrema salsugineum
Thhalv10017291m.g Eutrema salsugineum
Thhalv10026395m.g Eutrema salsugineum
TPR.G15321 Trifolium pratense
TPR.G18401 Trifolium pratense
TPR.G18875 Trifolium pratense
TPR.G33211 Trifolium pratense
TPR.G35881 Trifolium pratense
TWI34G1980 Tripterygium wilfordii
TWI56G0098 Tripterygium wilfordii
TWI63G0682 Tripterygium wilfordii
TWI63G0913 Tripterygium wilfordii
TWI75G0435 Tripterygium wilfordii
unitig_699.g19623 Utricularia gibba
vmacro05037 Vaccinium macrocarpon
vmacro06097 Vaccinium macrocarpon
vmacro12183 Vaccinium macrocarpon
vmacro17365 Vaccinium macrocarpon
vmacro19648 Vaccinium macrocarpon
VMungo0540G2107 Vigna mungo
VMungo0540G2482 Vigna mungo
VMungo1080G0209 Vigna mungo
VMungo1127G1995 Vigna mungo
VMungo1309G1528 Vigna mungo
Zm00001eb046490 Zea mays
Zm00001eb059370 Zea mays
Zm00001eb425990 Zea mays

User provided reference genes

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